Clone Name | bags9n19 |
---|---|
Clone Library Name | barley_pub |
>STAT1_HUMAN (P42224) Signal transducer and activator of transcription| 1-alpha/beta (Transcription factor ISGF-3 components p91/p84) Length = 750 Score = 30.0 bits (66), Expect = 2.5 Identities = 20/73 (27%), Positives = 33/73 (45%) Frame = +1 Query: 151 PQTLLGGVELSVKRRLRGRRTEIDYKFPSRKLYDPPTVLVLALFYHSDVSVLDSRTKLAQ 330 P L GV+ +VK RL + E++Y + L+D + ++L + TK+ Sbjct: 332 PLVLKTGVQFTVKLRLLVKLQELNYNLKVKVLFDKDVNERNTVKGFRKFNILGTHTKVMN 391 Query: 331 F*QSINGMLQGLF 369 +S NG L F Sbjct: 392 MEESTNGSLAAEF 404
>T2R14_MACMU (Q645T2) Taste receptor type 2 member 14 (T2R14)| Length = 319 Score = 29.3 bits (64), Expect = 4.3 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = +2 Query: 302 CSIAELNWLNFDNRSMVCFKGCFMFVPITSPIAPSTLLSF 421 CS A N++ F +R++ F+ +P T +A S LLSF Sbjct: 165 CSSASCNFIRF-SRAIALTSTVFVLIPFTLSLATSLLLSF 203
>STAT1_PIG (Q764M5) Signal transducer and activator of transcription 1| Length = 757 Score = 28.9 bits (63), Expect = 5.7 Identities = 19/73 (26%), Positives = 33/73 (45%) Frame = +1 Query: 151 PQTLLGGVELSVKRRLRGRRTEIDYKFPSRKLYDPPTVLVLALFYHSDVSVLDSRTKLAQ 330 P L GV+ +VK RL + +++Y + L+D + ++L + TK+ Sbjct: 332 PLVLKTGVQFTVKLRLLVKLQKLNYNLKVKVLFDKDVSERNTVKGFRKFNILGTHTKVMN 391 Query: 331 F*QSINGMLQGLF 369 +S NG L F Sbjct: 392 MEESTNGSLAAEF 404
>DNBI_VZVD (P09246) Major DNA-binding protein| Length = 1204 Score = 28.1 bits (61), Expect = 9.7 Identities = 15/37 (40%), Positives = 20/37 (54%) Frame = -1 Query: 156 LRRNLDHFDPAVSVXHGGSFNAINRAAAP*LHTTCGA 46 L+ HF P+V V HGG + + +AAP L C A Sbjct: 80 LKLTTSHFYPSVFVFHGGK-HVLPSSAAPNLTRACNA 115
>NDHF_BACSU (P39755) Probable NADH-quinone oxidoreductase subunit 5 (EC| 1.6.99.5) (NADH dehydrogenase subunit 5) Length = 505 Score = 28.1 bits (61), Expect = 9.7 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = +2 Query: 269 YSLCFTIVTYRCSIAELNWLNFDNRSMVCFKG 364 Y FT+ T+ A + WL+ D R MV F G Sbjct: 102 YRKYFTLFTFTTGAASMTWLSGDLRLMVLFWG 133
>IF3_CLOAB (Q97GK5) Translation initiation factor IF-3| Length = 175 Score = 28.1 bits (61), Expect = 9.7 Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 2/61 (3%) Frame = +1 Query: 148 APQTLLGGVELSVKRRLRGRRTEIDYKFPSRKLYDPPTVLVLALFYH--SDVSVLDSRTK 321 A + L+ G ++ V R RGR+T DY F RK+ D F+ +DV V++ K Sbjct: 111 ARKFLIAGDKVKVAVRFRGRQT--DYAFKGRKILDN--------FFEKINDVGVIEKPAK 160 Query: 322 L 324 L Sbjct: 161 L 161 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,891,415 Number of Sequences: 219361 Number of extensions: 1235079 Number of successful extensions: 2495 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2452 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2495 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2511994855 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)