ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags9n18 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY193714.1| Hordeum vulgare asparagine synthetase 2 (AS2) mRNA, complete cds Length = 1867 Score = 1041 bits (525), Expect = 0.0 Identities = 546/551 (99%), Gaps = 2/551 (0%) Strand = Plus / Plus Query: 1 ttcttgccgan-cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtat 59 |||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 1318 ttcttgccgaagcacattctgtacaggcagaaggagcagtttagtgatggtgttgggtat 1377 Query: 60 agctggattgatggccttaaggatcatgcagcatcaaatgtgagtgataagatgatgtcc 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1378 agctggattgatggccttaaggatcatgcagcatcaaatgtgagtgataagatgatgtcc 1437 Query: 120 aatgcaaagttcatctacccacacaacaccccaacaactaaagaggcctactattacagg 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1438 aatgcaaagttcatctacccacacaacaccccaacaactaaagaggcctactattacagg 1497 Query: 180 atgatcttcgagaggtacttccctcagagctcggcgatcctcacggtgccaggcgggcca 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1498 atgatcttcgagaggtacttccctcagagctcggcgatcctcacggtgccaggcgggcca 1557 Query: 240 agcgtggcgtgcagcacagccaaggcaatagagtgggacgcgcagtggtctgggaacctg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1558 agcgtggcgtgcagcacagccaaggcaatagagtgggacgcgcagtggtctgggaacctg 1617 Query: 300 gacccctctgggagagcagcgcttggagtccatctctcagcctacgagcaggacacgatc 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1618 gacccctctgggagagcagcgcttggagtccatctctcagcctacgagcaggacacgatc 1677 Query: 360 gctgtgggtggtagcaataagcctgggccgatggagacccgtggtgaatggtgttgccat 419 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1678 gctgtgggtggtagcaataagcctgggccgatggaga-ccgtggtgaatggtgttgccat 1736 Query: 420 agagagctgatgaatgacacgtatatcgtgtcctactaaagacatatatgatgcataagt 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1737 agagagctgatgaatgacacgtatatcgtgtcctactaaagacatatatgatgcataagt 1796 Query: 480 tcttgtcggtgttgtaataagacaggcctatgtttctcctgtttaatttaaaagattctc 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1797 tcttgtcggtgttgtaataagacaggcctatgtttctcctgtttaatttaaaagattctc 1856 Query: 540 ttggcctggcc 550 ||||||||||| Sbjct: 1857 ttggcctggcc 1867
>gb|BT009049.1| Triticum aestivum clone wdk9n1.pk001.f6:fis, full insert mRNA sequence Length = 2119 Score = 640 bits (323), Expect = e-180 Identities = 421/451 (93%), Gaps = 6/451 (1%) Strand = Plus / Plus Query: 15 attctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgatggc 74 ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1402 attctgtacaggcagaaggagcagtttagtgatggtgttgggtatagctggattgatggc 1461 Query: 75 cttaaggatcatgcagcatcaaatgtgagtgataagatgatgtccaatgcaaagttcatc 134 || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1462 ctgaaggatcatgcagcctcaaatgtgagtgataagatgatgtccaatgcaaagttcatc 1521 Query: 135 tacccacacaacaccccaacaactaaagaggcctactattacaggatgatcttcgagagg 194 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1522 tacccacacaacaccccaacaactaaagaggcctactattacaggatgatctttgagagg 1581 Query: 195 tacttccctcagagctcggcgatcctcacggtgccaggcgggccaagcgtggcgtgcagc 254 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1582 tacttcccccagagctcggcgatcctcacggtgccaggcgggccaagcgtggcgtgcagc 1641 Query: 255 acagccaaggcaatagagtgggacgcgcagtggtctgggaacctggacccctctgggaga 314 ||||||||||| ||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 1642 acagccaaggctatagagtgggatgcccaatggtctgggaacctggacccctctgggaga 1701 Query: 315 gcagcgcttggagtccatctctcagcctacgagcaggacacgatcgctgtgggtggtagc 374 |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct: 1702 gcagcgcttggagtccatctctcagcctacgagcaggacacggtcgctgtgggaggtagc 1761 Query: 375 aataagcctgggccgatggagacccgtggtgaatggtgttgccatagagagctgatgaat 434 || ||||||||| |||| | | ||||||| |||||||||||| |||| |||||||| Sbjct: 1762 aacaagcctggggtgatgaaca-ccgtggtacctggtgttgccattgagacttgatgaat 1820 Query: 435 g--acacgt---atatcgtgtcctactaaag 460 | ||| || ||||||||||||||||||| Sbjct: 1821 ggtacatgtatcatatcgtgtcctactaaag 1851 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 469 gatgcataagttcttgtcggtgttgtaataagacaggcctatgttt 514 |||||||| ||||||||| | ||||||||||||| ||||||||||| Sbjct: 1929 gatgcatatgttcttgtcagcgttgtaataagacgggcctatgttt 1974
>gb|BT009245.1| Triticum aestivum clone wlk1.pk0018.d4:fis, full insert mRNA sequence Length = 2064 Score = 385 bits (194), Expect = e-103 Identities = 304/341 (89%) Strand = Plus / Plus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||||||||||||||| |||||||||| |||||||||||||| || |||||||||||| Sbjct: 1385 cacattctgtacaggcagaaagagcagttcagtgatggtgttggctacagctggattgat 1444 Query: 72 ggccttaaggatcatgcagcatcaaatgtgagtgataagatgatgtccaatgcaaagttc 131 ||||| |||| ||| |||| ||||||||||| |||||||||||||| |||||||||||| Sbjct: 1445 ggcctaaaggctcacgcagaatcaaatgtgacagataagatgatgtcaaatgcaaagttc 1504 Query: 132 atctacccacacaacaccccaacaactaaagaggcctactattacaggatgatcttcgag 191 |||||||||||||||||||| || || ||||||||||||| |||||||||||| || ||| Sbjct: 1505 atctacccacacaacaccccgactacaaaagaggcctactgttacaggatgatatttgag 1564 Query: 192 aggtacttccctcagagctcggcgatcctcacggtgccaggcgggccaagcgtggcgtgc 251 |||| |||||| |||| |||||||||||| ||||||||||| ||||||||||| || ||| Sbjct: 1565 aggttcttcccccagaactcggcgatcctgacggtgccaggtgggccaagcgttgcatgc 1624 Query: 252 agcacagccaaggcaatagagtgggacgcgcagtggtctgggaacctggacccctctggg 311 ||||| || ||||| |||||||||| || |||||||| ||||||||||| ||||| ||| Sbjct: 1625 agcacggcgaaggcggtagagtgggatgcccagtggtcagggaacctggatccctcaggg 1684 Query: 312 agagcagcgcttggagtccatctctcagcctacgagcagga 352 |||||||| ||||||||||||||||| ||||| || ||||| Sbjct: 1685 agagcagcacttggagtccatctctcggcctatgaacagga 1725
>gb|AY621539.1| Triticum aestivum glutamine-dependent asparagine synthetase (ASN1) mRNA, complete cds Length = 1815 Score = 371 bits (187), Expect = 2e-99 Identities = 300/338 (88%) Strand = Plus / Plus Query: 15 attctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgatggc 74 ||||||||||||||| |||||||||| |||||||||||||| || ||||||||||||||| Sbjct: 1354 attctgtacaggcagaaagagcagttcagtgatggtgttggctacagctggattgatggc 1413 Query: 75 cttaaggatcatgcagcatcaaatgtgagtgataagatgatgtccaatgcaaagttcatc 134 || |||| ||| |||| ||| ||||||| |||||||||||||| ||||||||||||||| Sbjct: 1414 ctaaaggctcacgcagaatcgaatgtgacagataagatgatgtcaaatgcaaagttcatc 1473 Query: 135 tacccacacaacaccccaacaactaaagaggcctactattacaggatgatcttcgagagg 194 ||||||||||||||||| || || ||||||||||||| |||||||||||| || |||||| Sbjct: 1474 tacccacacaacaccccgactacaaaagaggcctactgttacaggatgatatttgagagg 1533 Query: 195 tacttccctcagagctcggcgatcctcacggtgccaggcgggccaagcgtggcgtgcagc 254 | |||||| |||| |||||||||||| ||||||||||| ||||||||||| || |||||| Sbjct: 1534 ttcttcccccagaactcggcgatcctgacggtgccaggtgggccaagcgttgcatgcagc 1593 Query: 255 acagccaaggcaatagagtgggacgcgcagtggtctgggaacctggacccctctgggaga 314 || || ||||| |||||||||| || |||||||| ||||||||||| ||||| |||||| Sbjct: 1594 acggcgaaggcggtagagtgggatgcccagtggtcagggaacctggatccctcagggaga 1653 Query: 315 gcagcgcttggagtccatctctcagcctacgagcagga 352 ||||| ||||||||||||||||| ||||| || ||||| Sbjct: 1654 gcagcacttggagtccatctctcggcctatgaacagga 1691
>gb|AF307145.1| Hordeum vulgare subsp. vulgare glutamine-dependent asparagine synthetase 1 mRNA, complete cds Length = 1973 Score = 353 bits (178), Expect = 4e-94 Identities = 300/341 (87%) Strand = Plus / Plus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||||||||||||||| |||||||||| |||||||||||||| || |||||||||||| Sbjct: 1401 cacattctgtacaggcagaaagagcagttcagtgatggtgttggctacagctggattgat 1460 Query: 72 ggccttaaggatcatgcagcatcaaatgtgagtgataagatgatgtccaatgcaaagttc 131 ||||| |||| || ||| ||||||||||| |||||||||||||| ||||| |||||| Sbjct: 1461 ggcctaaaggcccacacagaatcaaatgtgaccgataagatgatgtcaaatgcgaagttc 1520 Query: 132 atctacccacacaacaccccaacaactaaagaggcctactattacaggatgatcttcgag 191 || ||||||||||||||||| || || ||||||||||||| |||||||||||| || ||| Sbjct: 1521 atttacccacacaacaccccgactacaaaagaggcctactgttacaggatgatatttgag 1580 Query: 192 aggtacttccctcagagctcggcgatcctcacggtgccaggcgggccaagcgtggcgtgc 251 |||| |||||| |||| |||||| ||||| || |||||||||||||||||||| || ||| Sbjct: 1581 aggttcttcccccagaactcggcaatcctgacagtgccaggcgggccaagcgtcgcatgc 1640 Query: 252 agcacagccaaggcaatagagtgggacgcgcagtggtctgggaacctggacccctctggg 311 ||||| || |||||| |||||||||| || | |||||| ||||||||||| ||||| ||| Sbjct: 1641 agcacggcgaaggcagtagagtgggatgctcggtggtcggggaacctggatccctcaggg 1700 Query: 312 agagcagcgcttggagtccatctctcagcctacgagcagga 352 |||||||| ||||||||||||||||| ||||| |||||||| Sbjct: 1701 agagcagcacttggagtccatctctcggcctatgagcagga 1741
>gb|AY108716.1| Zea mays PCO093600 mRNA sequence Length = 673 Score = 246 bits (124), Expect = 7e-62 Identities = 246/287 (85%) Strand = Plus / Plus Query: 21 tacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgatggccttaag 80 ||||| ||| | |||||||| ||||| || |||||||| |||||||| |||||||| ||| Sbjct: 316 tacagacagaaggagcagttcagtgacggcgttgggtacagctggatcgatggcctgaag 375 Query: 81 gatcatgcagcatcaaatgtgagtgataagatgatgtccaatgcaaagttcatctaccca 140 | ||||||| |||||||||||| ||| |||||| |||| |||||||||||||||| |||| Sbjct: 376 gctcatgcaacatcaaatgtgactgacaagatgctgtcaaatgcaaagttcatcttccca 435 Query: 141 cacaacaccccaacaactaaagaggcctactattacaggatgatcttcgagaggtacttc 200 |||||||| || || || || ||||||||||| ||||||||| |||||||||||| |||| Sbjct: 436 cacaacactccgaccaccaaggaggcctactactacaggatggtcttcgagaggttcttc 495 Query: 201 cctcagagctcggcgatcctcacggtgccaggcgggccaagcgtggcgtgcagcacagcc 260 || |||| || || ||||| ||||| || || |||||||| |||||||||||||||||| Sbjct: 496 ccacagaaatctgctatcctgacggtacctggtgggccaagtgtggcgtgcagcacagcc 555 Query: 261 aaggcaatagagtgggacgcgcagtggtctgggaacctggacccctc 307 ||||| || ||||||||||| || ||||| || || ||||||||||| Sbjct: 556 aaggccatcgagtgggacgcacaatggtcaggaaatctggacccctc 602
>dbj|AB050900.1| Raphanus sativus Asn1 mRNA for asparagine synthetase, complete cds Length = 2088 Score = 119 bits (60), Expect = 1e-23 Identities = 167/203 (82%) Strand = Plus / Plus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||||| ||||| ||| |||||||||||||||||||||||||||| |||||||| ||| Sbjct: 1385 cacattctctacagacagaaagagcagtttagtgatggtgttgggtacagctggatcgat 1444 Query: 72 ggccttaaggatcatgcagcatcaaatgtgagtgataagatgatgtccaatgcaaagttc 131 ||||| || | ||||| || |||||| | ||| || ||||||||||| || | Sbjct: 1445 ggcctcaaagcccatgctgctgaaaatgtcaatgacaaaatgatgtccaacgctgcatat 1504 Query: 132 atctacccacacaacaccccaacaactaaagaggcctactattacaggatgatcttcgag 191 |||| ||| |||||||||||| || ||||| || ||||||||||| |||||||||||| Sbjct: 1505 atcttccctcacaacaccccactcaccaaagaagcttactattacagaatgatcttcgag 1564 Query: 192 aggtacttccctcagagctcggc 214 |||| |||||| |||| |||||| Sbjct: 1565 aggttcttcccacagaactcggc 1587
>gb|AY081945.1| Securigera parviflora asparagine synthetase (As1) mRNA, complete cds Length = 2109 Score = 105 bits (53), Expect = 2e-19 Identities = 160/196 (81%) Strand = Plus / Plus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||| |||| |||||| |||| || || |||||||| ||||| ||||| ||||||||| Sbjct: 1477 cacattttgtataggcagaaagaacaattcagtgatggagttggctatagttggattgat 1536 Query: 72 ggccttaaggatcatgcagcatcaaatgtgagtgataagatgatgtccaatgcaaagttc 131 |||||||| || ||||| ||| | |||||| |||||||||||| | |||||| | Sbjct: 1537 ggccttaaagaacatgctgcaaaacatgtgactgataagatgattttcaatgctgctaac 1596 Query: 132 atctacccacacaacaccccaacaactaaagaggcctactattacaggatgatcttcgag 191 |||| ||| ||||||||||||||||| || || || || || ||| | |||||||| ||| Sbjct: 1597 atcttcccccacaacaccccaacaaccaaggaagcgtattactaccgaatgatctttgag 1656 Query: 192 aggtacttccctcaga 207 |||| ||||||||||| Sbjct: 1657 aggttcttccctcaga 1672
>dbj|AB035247.1| Astragalus sinicus AsAS1 mRNA for asparagine synthetase, complete cds Length = 1931 Score = 105 bits (53), Expect = 2e-19 Identities = 151/184 (82%) Strand = Plus / Plus Query: 24 aggcagnaagagcagtttagtgatggtgttgggtatagctggattgatggccttaaggat 83 |||||| |||| ||||| |||||||||||||| ||||||||||||||||||||||| | | Sbjct: 1350 aggcagaaagaacagttcagtgatggtgttggctatagctggattgatggccttaaagct 1409 Query: 84 catgcagcatcaaatgtgagtgataagatgatgtccaatgcaaagttcatctacccacac 143 ||||| ||| | |||||| |||||| |||||| ||||| |||||||| ||| Sbjct: 1410 catgctgcaaaacatgtgactgataaaatgatgcgtaatgctgctaatatctaccctcac 1469 Query: 144 aacaccccaacaactaaagaggcctactattacaggatgatcttcgagaggtacttccct 203 ||||| ||| ||||||| || | ||||| ||||| |||||||| ||||||| ||||||| Sbjct: 1470 aacactccatcaactaaggaaggatactactacagaatgatctttgagaggttcttccct 1529 Query: 204 caga 207 |||| Sbjct: 1530 caga 1533
>emb|X84448.1|BOASPSYN B.oleracea mRNA for asparagine synthetase Length = 2085 Score = 103 bits (52), Expect = 6e-19 Identities = 165/203 (81%) Strand = Plus / Plus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||||| ||||| ||| ||||||||||||||||||||||||| || |||||||| ||| Sbjct: 1365 cacattctctacagacagaaagagcagtttagtgatggtgttggctacagctggatcgat 1424 Query: 72 ggccttaaggatcatgcagcatcaaatgtgagtgataagatgatgtccaatgcaaagttc 131 ||||| || | || || || |||||| | ||| ||||||||||| || || || Sbjct: 1425 ggcctcaaagcccacgctgctgaaaatgttaatgacaagatgatgtcgaaagctgctttt 1484 Query: 132 atctacccacacaacaccccaacaactaaagaggcctactattacaggatgatcttcgag 191 |||| ||| |||||||||||| || ||||| || ||||||||||| |||||||| ||| Sbjct: 1485 atcttccctcacaacaccccactcaccaaagaagcatactattacagaatgatctttgag 1544 Query: 192 aggtacttccctcagagctcggc 214 |||| |||||| |||| |||||| Sbjct: 1545 aggttcttcccacagaactcggc 1567
>emb|AJ009952.1|PVU9952 Phaseolus vulgaris mRNA for asparagine synthetase type II Length = 2044 Score = 81.8 bits (41), Expect = 2e-12 Identities = 157/196 (80%) Strand = Plus / Plus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||| | ||||||||| |||| || || |||||||| ||||| ||||| ||||||||| Sbjct: 1349 cacattttatacaggcagaaagaacaattcagtgatggagttggctatagttggattgat 1408 Query: 72 ggccttaaggatcatgcagcatcaaatgtgagtgataagatgatgtccaatgcaaagttc 131 |||||||||| |||||| ||| | |||||| ||| || |||||| ||||| | Sbjct: 1409 ggccttaaggctcatgctgcaaaacatgtgactgacaaaatgatgcttaatgctggtaac 1468 Query: 132 atctacccacacaacaccccaacaactaaagaggcctactattacaggatgatcttcgag 191 ||||| || |||||||||||| ||| || || || ||||| || || |||||||| ||| Sbjct: 1469 atctatccccacaacaccccagtaaccaaggaagcatactactatagaatgatctttgag 1528 Query: 192 aggtacttccctcaga 207 |||| ||||||||||| Sbjct: 1529 aggttcttccctcaga 1544
>emb|X89410.1|LJAS2GENE L.japonicus mRNA for asparagine synthetase (clone LJAS2) Length = 2187 Score = 79.8 bits (40), Expect = 9e-12 Identities = 162/203 (79%) Strand = Plus / Plus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 ||||||||||| |||||| |||| || || |||||||| ||||| ||| | ||||||||| Sbjct: 1474 cacattctgtataggcagaaagaacaattcagtgatggagttggctatggttggattgat 1533 Query: 72 ggccttaaggatcatgcagcatcaaatgtgagtgataagatgatgtccaatgcaaagttc 131 || || || || ||||| ||| | |||||| |||||| |||||| ||||||| | Sbjct: 1534 gggctgaaagaccatgctgcaaaacatgtgactgataaaatgatgctcaatgcatctaac 1593 Query: 132 atctacccacacaacaccccaacaactaaagaggcctactattacaggatgatcttcgag 191 || ||||| |||||| || | || ||||| ||||| ||||||||||||||||| ||| Sbjct: 1594 atttaccccttcaacactcccaataccaaagaagcctattattacaggatgatctttgag 1653 Query: 192 aggtacttccctcagagctcggc 214 |||| ||| ||||||| |||||| Sbjct: 1654 aggttctttcctcagaactcggc 1676
>gb|AF005724.1| Sandersonia aurantiaca asparagine synthetase (SAND1) mRNA, complete cds Length = 2121 Score = 79.8 bits (40), Expect = 9e-12 Identities = 63/71 (88%) Strand = Plus / Plus Query: 21 tacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgatggccttaag 80 ||||||||| |||| |||||||||||||| ||||| || |||||||||||||| |||||| Sbjct: 1381 tacaggcagaaagaacagtttagtgatggagttggctacagctggattgatggacttaag 1440 Query: 81 gatcatgcagc 91 | |||| |||| Sbjct: 1441 gctcattcagc 1451
>ref|NM_180941.1| Arabidopsis thaliana ASN2 (ASPARAGINE SYNTHETASE 2); asparagine synthase (glutamine-hydrolyzing) AT5G65010 (ASN2) transcript variant AT5G65010.1 mRNA, complete cds Length = 2068 Score = 77.8 bits (39), Expect = 4e-11 Identities = 68/78 (87%) Strand = Plus / Plus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||||| || || ||| |||| |||||||||||||| ||||||||||||||||| ||| Sbjct: 1364 cacattctatatagacagaaagaacagtttagtgatggagttgggtatagctggatagat 1423 Query: 72 ggccttaaggatcatgca 89 || || || ||||||||| Sbjct: 1424 ggtctgaaagatcatgca 1441
>ref|NM_125900.2| Arabidopsis thaliana ASN2 (ASPARAGINE SYNTHETASE 2); asparagine synthase (glutamine-hydrolyzing) AT5G65010 (ASN2) transcript variant AT5G65010.2 mRNA, complete cds Length = 2071 Score = 77.8 bits (39), Expect = 4e-11 Identities = 68/78 (87%) Strand = Plus / Plus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||||| || || ||| |||| |||||||||||||| ||||||||||||||||| ||| Sbjct: 1364 cacattctatatagacagaaagaacagtttagtgatggagttgggtatagctggatagat 1423 Query: 72 ggccttaaggatcatgca 89 || || || ||||||||| Sbjct: 1424 ggtctgaaagatcatgca 1441
>gb|AY124866.1| Arabidopsis thaliana AT5g65010/MXK3_25 mRNA, complete cds Length = 1737 Score = 77.8 bits (39), Expect = 4e-11 Identities = 68/78 (87%) Strand = Plus / Plus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||||| || || ||| |||| |||||||||||||| ||||||||||||||||| ||| Sbjct: 1330 cacattctatatagacagaaagaacagtttagtgatggagttgggtatagctggatagat 1389 Query: 72 ggccttaaggatcatgca 89 || || || ||||||||| Sbjct: 1390 ggtctgaaagatcatgca 1407
>gb|AF367340.1| Arabidopsis thaliana AT5g65010/MXK3_25 mRNA, complete cds Length = 2028 Score = 77.8 bits (39), Expect = 4e-11 Identities = 68/78 (87%) Strand = Plus / Plus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||||| || || ||| |||| |||||||||||||| ||||||||||||||||| ||| Sbjct: 1363 cacattctatatagacagaaagaacagtttagtgatggagttgggtatagctggatagat 1422 Query: 72 ggccttaaggatcatgca 89 || || || ||||||||| Sbjct: 1423 ggtctgaaagatcatgca 1440
>gb|AF095453.1|AF095453 Arabidopsis thaliana asparagine synthetase (ASN2) mRNA, complete cds Length = 1960 Score = 77.8 bits (39), Expect = 4e-11 Identities = 68/78 (87%) Strand = Plus / Plus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||||| || || ||| |||| |||||||||||||| ||||||||||||||||| ||| Sbjct: 1330 cacattctatatagacagaaagaacagtttagtgatggagttgggtatagctggatagat 1389 Query: 72 ggccttaaggatcatgca 89 || || || ||||||||| Sbjct: 1390 ggtctgaaagatcatgca 1407
>dbj|AB019236.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXK3 Length = 81494 Score = 77.8 bits (39), Expect = 4e-11 Identities = 68/78 (87%) Strand = Plus / Plus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||||| || || ||| |||| |||||||||||||| ||||||||||||||||| ||| Sbjct: 69043 cacattctatatagacagaaagaacagtttagtgatggagttgggtatagctggatagat 69102 Query: 72 ggccttaaggatcatgca 89 || || || ||||||||| Sbjct: 69103 ggtctgaaagatcatgca 69120
>ref|NM_114602.2| Arabidopsis thaliana ASN1 (DARK INDUCIBLE 6) AT3G47340 (ASN1) transcript variant AT3G47340.1 mRNA, complete cds Length = 2206 Score = 75.8 bits (38), Expect = 1e-10 Identities = 163/205 (79%) Strand = Plus / Plus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||||| ||||| ||| |||| ||||| |||||||||||||| || || ||||| ||| Sbjct: 1529 cacattctctacagacagaaagaacagttcagtgatggtgttggctacagttggatcgat 1588 Query: 72 ggccttaaggatcatgcagcatcaaatgtgagtgataagatgatgtccaatgcaaagttc 131 ||||| || ||||| || || |||||| | ||| ||||||||||| || || | Sbjct: 1589 ggcctgaaagatcacgctgctcaaaatgtcaatgacaagatgatgtcgaacgcggggcat 1648 Query: 132 atctacccacacaacaccccaacaactaaagaggcctactattacaggatgatcttcgag 191 |||| ||| |||||||| |||| |||||||| || ||||| ||||| |||||||| || Sbjct: 1649 atcttccctcacaacactccaaacactaaagaagcttactactacagaatgatctttgaa 1708 Query: 192 aggtacttccctcagagctcggcga 216 |||| |||||| |||| ||| |||| Sbjct: 1709 aggttcttcccgcagaactctgcga 1733
>emb|X89409.1|LJAS1GENE L.japonicus mRNA for asparagine synthetase (clone LJAS1) Length = 2053 Score = 75.8 bits (38), Expect = 1e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 ||||||||||| |||||| |||| || || |||||||| ||||| ||||| ||||||||| Sbjct: 1428 cacattctgtataggcagaaagaacaattcagtgatggagttggctatagttggattgat 1487 Query: 72 ggccttaaggatcatgc 88 |||||||| || ||||| Sbjct: 1488 ggccttaaagaccatgc 1504
>gb|AY096592.1| Arabidopsis thaliana putative glutamine-dependent asparagine synthetase (At3g47340) mRNA, complete cds Length = 1786 Score = 75.8 bits (38), Expect = 1e-10 Identities = 163/205 (79%) Strand = Plus / Plus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||||| ||||| ||| |||| ||||| |||||||||||||| || || ||||| ||| Sbjct: 1330 cacattctctacagacagaaagaacagttcagtgatggtgttggctacagttggatcgat 1389 Query: 72 ggccttaaggatcatgcagcatcaaatgtgagtgataagatgatgtccaatgcaaagttc 131 ||||| || ||||| || || |||||| | ||| ||||||||||| || || | Sbjct: 1390 ggcctgaaagatcacgctgctcaaaatgtcaatgacaagatgatgtcgaacgcggggcat 1449 Query: 132 atctacccacacaacaccccaacaactaaagaggcctactattacaggatgatcttcgag 191 |||| ||| |||||||| |||| |||||||| || ||||| ||||| |||||||| || Sbjct: 1450 atcttccctcacaacactccaaacactaaagaagcttactactacagaatgatctttgaa 1509 Query: 192 aggtacttccctcagagctcggcga 216 |||| |||||| |||| ||| |||| Sbjct: 1510 aggttcttcccgcagaactctgcga 1534
>gb|AY072214.1| Arabidopsis thaliana putative glutamine-dependent asparagine synthetase (At3g47340) mRNA, complete cds Length = 2183 Score = 75.8 bits (38), Expect = 1e-10 Identities = 163/205 (79%) Strand = Plus / Plus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||||| ||||| ||| |||| ||||| |||||||||||||| || || ||||| ||| Sbjct: 1531 cacattctctacagacagaaagaacagttcagtgatggtgttggctacagttggatcgat 1590 Query: 72 ggccttaaggatcatgcagcatcaaatgtgagtgataagatgatgtccaatgcaaagttc 131 ||||| || ||||| || || |||||| | ||| ||||||||||| || || | Sbjct: 1591 ggcctgaaagatcacgctgctcaaaatgtcaatgacaagatgatgtcgaacgcggggcat 1650 Query: 132 atctacccacacaacaccccaacaactaaagaggcctactattacaggatgatcttcgag 191 |||| ||| |||||||| |||| |||||||| || ||||| ||||| |||||||| || Sbjct: 1651 atcttccctcacaacactccaaacactaaagaagcttactactacagaatgatctttgaa 1710 Query: 192 aggtacttccctcagagctcggcga 216 |||| |||||| |||| ||| |||| Sbjct: 1711 aggttcttcccgcagaactctgcga 1735
>gb|AF419557.1|AF419557 Arabidopsis thaliana AT3g47340/T21L8_90 mRNA, complete cds Length = 2123 Score = 75.8 bits (38), Expect = 1e-10 Identities = 163/205 (79%) Strand = Plus / Plus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||||| ||||| ||| |||| ||||| |||||||||||||| || || ||||| ||| Sbjct: 1526 cacattctctacagacagaaagaacagttcagtgatggtgttggctacagttggatcgat 1585 Query: 72 ggccttaaggatcatgcagcatcaaatgtgagtgataagatgatgtccaatgcaaagttc 131 ||||| || ||||| || || |||||| | ||| ||||||||||| || || | Sbjct: 1586 ggcctgaaagatcacgctgctcaaaatgtcaatgacaagatgatgtcgaacgcggggcat 1645 Query: 132 atctacccacacaacaccccaacaactaaagaggcctactattacaggatgatcttcgag 191 |||| ||| |||||||| |||| |||||||| || ||||| ||||| |||||||| || Sbjct: 1646 atcttccctcacaacactccaaacactaaagaagcttactactacagaatgatctttgaa 1705 Query: 192 aggtacttccctcagagctcggcga 216 |||| |||||| |||| ||| |||| Sbjct: 1706 aggttcttcccgcagaactctgcga 1730
>gb|L29083.1|ATHMTGDAS Arabidopsis thaliana (clone At-ASN1) glutamine-dependent asparagine synthetase mRNA, complete cds Length = 1755 Score = 75.8 bits (38), Expect = 1e-10 Identities = 163/205 (79%) Strand = Plus / Plus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||||| ||||| ||| |||| ||||| |||||||||||||| || || ||||| ||| Sbjct: 1330 cacattctctacagacagaaagaacagttcagtgatggtgttggctacagttggatcgat 1389 Query: 72 ggccttaaggatcatgcagcatcaaatgtgagtgataagatgatgtccaatgcaaagttc 131 ||||| || ||||| || || |||||| | ||| ||||||||||| || || | Sbjct: 1390 ggcctgaaagatcacgctgctcaaaatgtcaatgacaagatgatgtcgaacgcggggcat 1449 Query: 132 atctacccacacaacaccccaacaactaaagaggcctactattacaggatgatcttcgag 191 |||| ||| |||||||| |||| |||||||| || ||||| ||||| |||||||| || Sbjct: 1450 atcttccctcacaacactccaaacactaaagaagcttactactacagaatgatctttgaa 1509 Query: 192 aggtacttccctcagagctcggcga 216 |||| |||||| |||| ||| |||| Sbjct: 1510 aggttcttcccgcagaactctgcga 1534
>emb|BX824817.1|CNS0A4VX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH75ZB03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2052 Score = 73.8 bits (37), Expect = 5e-10 Identities = 156/196 (79%) Strand = Plus / Plus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||||| ||||| ||| |||| ||||| |||||||||||||| || || ||||| ||| Sbjct: 1508 cacattctctacagacagaaagaacagttcagtgatggtgttggctacagttggatcgat 1567 Query: 72 ggccttaaggatcatgcagcatcaaatgtgagtgataagatgatgtccaatgcaaagttc 131 ||||| || ||||| || || |||||| | ||| ||||||||||| || || | Sbjct: 1568 ggcctgaaagatcacgctgctcaaaatgtcaatgacaagatgatgtcgaacgcggggcat 1627 Query: 132 atctacccacacaacaccccaacaactaaagaggcctactattacaggatgatcttcgag 191 |||| ||| |||||||| |||| |||||||| || ||||| ||||| |||||||| || Sbjct: 1628 atcttccctcacaacactccaaacactaaagaagcttactactacagaatgatctttgaa 1687 Query: 192 aggtacttccctcaga 207 |||| |||||| |||| Sbjct: 1688 aggttcttcccgcaga 1703
>ref|NM_180332.1| Arabidopsis thaliana ASN1 (DARK INDUCIBLE 6) AT3G47340 (ASN1) transcript variant AT3G47340.2 mRNA, complete cds Length = 2299 Score = 71.9 bits (36), Expect = 2e-09 Identities = 152/191 (79%) Strand = Plus / Plus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||||| ||||| ||| |||| ||||| |||||||||||||| || || ||||| ||| Sbjct: 1529 cacattctctacagacagaaagaacagttcagtgatggtgttggctacagttggatcgat 1588 Query: 72 ggccttaaggatcatgcagcatcaaatgtgagtgataagatgatgtccaatgcaaagttc 131 ||||| || ||||| || || |||||| | ||| ||||||||||| || || | Sbjct: 1589 ggcctgaaagatcacgctgctcaaaatgtcaatgacaagatgatgtcgaacgcggggcat 1648 Query: 132 atctacccacacaacaccccaacaactaaagaggcctactattacaggatgatcttcgag 191 |||| ||| |||||||| |||| |||||||| || ||||| ||||| |||||||| || Sbjct: 1649 atcttccctcacaacactccaaacactaaagaagcttactactacagaatgatctttgaa 1708 Query: 192 aggtacttccc 202 |||| |||||| Sbjct: 1709 aggttcttccc 1719
>ref|NM_121062.2| Arabidopsis thaliana ASN3 (ASPARAGINE SYNTHETASE 3); asparagine synthase (glutamine-hydrolyzing) AT5G10240 (ASN3) transcript variant AT5G10240.1 mRNA, complete cds Length = 2018 Score = 69.9 bits (35), Expect = 9e-09 Identities = 67/78 (85%) Strand = Plus / Plus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||||| || |||||| |||| ||||| |||||||| ||||| || |||||||||||| Sbjct: 1376 cacattctatataggcagaaagaacagttcagtgatggagttggatacagctggattgat 1435 Query: 72 ggccttaaggatcatgca 89 || || || ||||||||| Sbjct: 1436 ggtctaaaagatcatgca 1453
>ref|NM_001036787.1| Arabidopsis thaliana ASN3 (ASPARAGINE SYNTHETASE 3); asparagine synthase (glutamine-hydrolyzing) AT5G10240 (ASN3) transcript variant AT5G10240.2 mRNA, complete cds Length = 2028 Score = 69.9 bits (35), Expect = 9e-09 Identities = 67/78 (85%) Strand = Plus / Plus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||||| || |||||| |||| ||||| |||||||| ||||| || |||||||||||| Sbjct: 1375 cacattctatataggcagaaagaacagttcagtgatggagttggatacagctggattgat 1434 Query: 72 ggccttaaggatcatgca 89 || || || ||||||||| Sbjct: 1435 ggtctaaaagatcatgca 1452
>emb|AL360334.1|ATF18D22 Arabidopsis thaliana DNA chromosome 5, BAC clone F18D22 (ESSA project) Length = 57180 Score = 69.9 bits (35), Expect = 9e-09 Identities = 67/78 (85%) Strand = Plus / Minus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||||| || |||||| |||| ||||| |||||||| ||||| || |||||||||||| Sbjct: 18323 cacattctatataggcagaaagaacagttcagtgatggagttggatacagctggattgat 18264 Query: 72 ggccttaaggatcatgca 89 || || || ||||||||| Sbjct: 18263 ggtctaaaagatcatgca 18246
>gb|AF095452.1|AF095452 Arabidopsis thaliana asparagine synthetase (ASN3) mRNA, complete cds Length = 1986 Score = 69.9 bits (35), Expect = 9e-09 Identities = 67/78 (85%) Strand = Plus / Plus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||||| || |||||| |||| ||||| |||||||| ||||| || |||||||||||| Sbjct: 1330 cacattctatataggcagaaagaacagttcagtgatggagttggatacagctggattgat 1389 Query: 72 ggccttaaggatcatgca 89 || || || ||||||||| Sbjct: 1390 ggtctaaaagatcatgca 1407
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 69.9 bits (35), Expect = 9e-09 Identities = 67/78 (85%) Strand = Plus / Minus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||||| |||||||| | ||||| || ||||||||||||||||| || ||||||||| Sbjct: 8770770 cacattctatacaggcaaaaggagcaattcagtgatggtgttgggtacagttggattgat 8770711 Query: 72 ggccttaaggatcatgca 89 || | |||||||||||| Sbjct: 8770710 ggattgaaggatcatgca 8770693
>emb|BX830209.1|CNS09YW6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB66ZB09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1954 Score = 69.9 bits (35), Expect = 9e-09 Identities = 67/78 (85%) Strand = Plus / Plus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||||| || |||||| |||| ||||| |||||||| ||||| || |||||||||||| Sbjct: 1336 cacattctatataggcagaaagaacagttcagtgatggagttggatacagctggattgat 1395 Query: 72 ggccttaaggatcatgca 89 || || || ||||||||| Sbjct: 1396 ggtctaaaagatcatgca 1413
>gb|BT005014.1| Arabidopsis thaliana clone U20709 putative asparagine synthetase ASN3 (At5g10240) mRNA, complete cds Length = 1768 Score = 69.9 bits (35), Expect = 9e-09 Identities = 67/78 (85%) Strand = Plus / Plus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||||| || |||||| |||| ||||| |||||||| ||||| || |||||||||||| Sbjct: 1330 cacattctatataggcagaaagaacagttcagtgatggagttggatacagctggattgat 1389 Query: 72 ggccttaaggatcatgca 89 || || || ||||||||| Sbjct: 1390 ggtctaaaagatcatgca 1407
>gb|BT003929.1| Arabidopsis thaliana clone RAFL15-17-K18 (R20709) putative asparagine synthetase ASN3 (At5g10240) mRNA, complete cds Length = 2026 Score = 69.9 bits (35), Expect = 9e-09 Identities = 67/78 (85%) Strand = Plus / Plus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||||| || |||||| |||| ||||| |||||||| ||||| || |||||||||||| Sbjct: 1376 cacattctatataggcagaaagaacagttcagtgatggagttggatacagctggattgat 1435 Query: 72 ggccttaaggatcatgca 89 || || || ||||||||| Sbjct: 1436 ggtctaaaagatcatgca 1453
>dbj|AP005382.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1001_B06 Length = 134810 Score = 69.9 bits (35), Expect = 9e-09 Identities = 67/78 (85%) Strand = Plus / Minus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||||| |||||||| | ||||| || ||||||||||||||||| || ||||||||| Sbjct: 41091 cacattctatacaggcaaaaggagcaattcagtgatggtgttgggtacagttggattgat 41032 Query: 72 ggccttaaggatcatgca 89 || | |||||||||||| Sbjct: 41031 ggattgaaggatcatgca 41014
>dbj|AK100247.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058E10, full insert sequence Length = 2265 Score = 69.9 bits (35), Expect = 9e-09 Identities = 67/78 (85%) Strand = Plus / Plus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||||| |||||||| | ||||| || ||||||||||||||||| || ||||||||| Sbjct: 1452 cacattctatacaggcaaaaggagcaattcagtgatggtgttgggtacagttggattgat 1511 Query: 72 ggccttaaggatcatgca 89 || | |||||||||||| Sbjct: 1512 ggattgaaggatcatgca 1529
>emb|AL356332.1|ATT31P16 Arabidopsis thaliana DNA chromosome 5, BAC clone T31P16 (ESSA project) Length = 80088 Score = 69.9 bits (35), Expect = 9e-09 Identities = 67/78 (85%) Strand = Plus / Minus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||||| || |||||| |||| ||||| |||||||| ||||| || |||||||||||| Sbjct: 78225 cacattctatataggcagaaagaacagttcagtgatggagttggatacagctggattgat 78166 Query: 72 ggccttaaggatcatgca 89 || || || ||||||||| Sbjct: 78165 ggtctaaaagatcatgca 78148
>gb|U55873.1|OSU55873 Oryza sativa asparagine synthetase mRNA, complete cds Length = 2172 Score = 69.9 bits (35), Expect = 9e-09 Identities = 67/78 (85%) Strand = Plus / Plus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||||| |||||||| | ||||| || ||||||||||||||||| || ||||||||| Sbjct: 1463 cacattctatacaggcaaaaggagcaattcagtgatggtgttgggtacagttggattgat 1522 Query: 72 ggccttaaggatcatgca 89 || | |||||||||||| Sbjct: 1523 ggattgaaggatcatgca 1540
>dbj|D83378.1|RICAS Oryza sativa (japonica cultivar-group) mRNA for asparagine synthetase, complete cds Length = 2141 Score = 69.9 bits (35), Expect = 9e-09 Identities = 67/78 (85%) Strand = Plus / Plus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||||| |||||||| | ||||| || ||||||||||||||||| || ||||||||| Sbjct: 1463 cacattctatacaggcaaaaggagcaattcagtgatggtgttgggtacagttggattgat 1522 Query: 72 ggccttaaggatcatgca 89 || | |||||||||||| Sbjct: 1523 ggattgaaggatcatgca 1540
>emb|X52180.1|PSAS2 Pea AS2 root mRNA for asparagine synthase (EC 6.3.5.4) Length = 2002 Score = 67.9 bits (34), Expect = 3e-08 Identities = 66/77 (85%) Strand = Plus / Plus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||| |||| |||||| |||| || || |||||||| ||||| ||||||||||||||| Sbjct: 1431 cacattttgtataggcagaaagaacaattcagtgatggagttggttatagctggattgat 1490 Query: 72 ggccttaaggatcatgc 88 || ||||| | |||||| Sbjct: 1491 ggtcttaaagctcatgc 1507
>emb|X67958.1|AOASPSYNM A.officinalis mRNA for asparagine synthetase Length = 1978 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 135 tacccacacaacaccccaacaactaaagaggcctactattacaggatgatcttcgagagg 194 ||||| |||||||| ||||| || |||||||| || || ||||| |||||||| || ||| Sbjct: 1508 tacccccacaacacaccaaccacaaaagaggcttattactacagaatgatctttgaaagg 1567 Query: 195 tacttccctcagagctcggcga 216 | ||||||||||| |||||||| Sbjct: 1568 ttcttccctcagaactcggcga 1589 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 33 gagcagtttagtgatggtgttgggtatagctggattgatggccttaaggatcatgc 88 |||||||| |||||||||||||| ||||| ||||||||||| || |||| |||||| Sbjct: 1406 gagcagttcagtgatggtgttggatatagttggattgatgggctgaaggctcatgc 1461
>emb|CT573508.2| Medicago truncatula chromosome 5 clone mth2-29p15, COMPLETE SEQUENCE Length = 125647 Score = 67.9 bits (34), Expect = 3e-08 Identities = 66/77 (85%) Strand = Plus / Plus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||| | ||||||||| | || || || |||||||||||||| ||||| ||||||||| Sbjct: 6815 cacattttatacaggcagaaggaacaattcagtgatggtgttggttatagttggattgat 6874 Query: 72 ggccttaaggatcatgc 88 |||||||| | |||||| Sbjct: 6875 ggccttaaagctcatgc 6891 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 132 atctacccacacaacaccccaacaactaaagaggcctactattacaggatgatcttcgag 191 |||||||| ||||||||||||| || || || || ||||| ||||| |||||||| ||| Sbjct: 7036 atctacccccacaacaccccaaacaccaaggaagcatactactacagaatgatctttgag 7095 Query: 192 aggtacttccc 202 |||| |||||| Sbjct: 7096 aggttcttccc 7106
>emb|X99552.1|AOASPS A.officinalis gene encoding asparagine synthetase Length = 3812 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 33 gagcagtttagtgatggtgttgggtatagctggattgatggccttaaggatcatgc 88 |||||||| |||||||||||||| ||||| ||||||||||| || |||| |||||| Sbjct: 3101 gagcagttcagtgatggtgttggatatagttggattgatgggctgaaggctcatgc 3156
>ref|NM_180333.1| Arabidopsis thaliana ASN1 (DARK INDUCIBLE 6) AT3G47340 (ASN1) transcript variant AT3G47340.3 mRNA, complete cds Length = 2380 Score = 61.9 bits (31), Expect = 2e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||||| ||||| ||| |||| ||||| |||||||||||||| || || ||||| ||| Sbjct: 1612 cacattctctacagacagaaagaacagttcagtgatggtgttggctacagttggatcgat 1671 Query: 72 ggccttaaggatca 85 ||||| || ||||| Sbjct: 1672 ggcctgaaagatca 1685
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 61.9 bits (31), Expect = 2e-06 Identities = 60/70 (85%) Strand = Plus / Minus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 ||||| |||||||||||| |||||||||| |||||||| || || || | |||||| ||| Sbjct: 10093279 cacatactgtacaggcagaaagagcagttcagtgatggcgtcggctacaactggatcgat 10093220 Query: 72 ggccttaagg 81 ||||| |||| Sbjct: 10093219 ggcctgaagg 10093210
>emb|AL096860.1|ATT21L8 Arabidopsis thaliana DNA chromosome 3, BAC clone T21L8 Length = 87224 Score = 61.9 bits (31), Expect = 2e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||||| ||||| ||| |||| ||||| |||||||||||||| || || ||||| ||| Sbjct: 38166 cacattctctacagacagaaagaacagttcagtgatggtgttggctacagttggatcgat 38107 Query: 72 ggccttaaggatca 85 ||||| || ||||| Sbjct: 38106 ggcctgaaagatca 38093
>gb|AC137634.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0078C05, complete sequence Length = 122116 Score = 61.9 bits (31), Expect = 2e-06 Identities = 60/70 (85%) Strand = Plus / Minus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 ||||| |||||||||||| |||||||||| |||||||| || || || | |||||| ||| Sbjct: 38900 cacatactgtacaggcagaaagagcagttcagtgatggcgtcggctacaactggatcgat 38841 Query: 72 ggccttaagg 81 ||||| |||| Sbjct: 38840 ggcctgaagg 38831
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 61.9 bits (31), Expect = 2e-06 Identities = 60/70 (85%) Strand = Plus / Minus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 ||||| |||||||||||| |||||||||| |||||||| || || || | |||||| ||| Sbjct: 10091400 cacatactgtacaggcagaaagagcagttcagtgatggcgtcggctacaactggatcgat 10091341 Query: 72 ggccttaagg 81 ||||| |||| Sbjct: 10091340 ggcctgaagg 10091331
>gb|DQ227307.1| Glycine max asparagine synthetase mRNA, complete cds Length = 1752 Score = 60.0 bits (30), Expect = 8e-06 Identities = 65/77 (84%) Strand = Plus / Plus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||| | ||||||||| |||| || || |||||||| ||||| ||| | ||||||||| Sbjct: 1337 cacattttatacaggcagaaagaacaattcagtgatggagttggctatggttggattgat 1396 Query: 72 ggccttaaggatcatgc 88 |||||||| | |||||| Sbjct: 1397 ggccttaaagctcatgc 1413
>gb|AF014057.1| Triphysaria versicolor asparagine synthetase (AS) mRNA, complete cds Length = 1906 Score = 60.0 bits (30), Expect = 8e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 19 tgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggat 67 |||| |||||| |||| ||||||||||||||||| || ||||||||||| Sbjct: 1337 tgtataggcagaaagaacagtttagtgatggtgtcggatatagctggat 1385
>gb|AF014056.1| Triphysaria versicolor asparagine synthetase (AS) mRNA, complete cds Length = 2055 Score = 60.0 bits (30), Expect = 8e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 19 tgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggat 67 |||| |||||| |||| ||||||||||||||||| || ||||||||||| Sbjct: 1337 tgtataggcagaaagaacagtttagtgatggtgtcggatatagctggat 1385
>gb|U55874.1|GMU55874 Glycine max asparagine synthetase mRNA, complete cds Length = 2211 Score = 60.0 bits (30), Expect = 8e-06 Identities = 65/77 (84%) Strand = Plus / Plus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||| | ||||||||| |||| || || |||||||| ||||| ||| | ||||||||| Sbjct: 1503 cacattttatacaggcagaaagaacaattcagtgatggagttggctatggttggattgat 1562 Query: 72 ggccttaaggatcatgc 88 |||||||| | |||||| Sbjct: 1563 ggccttaaagctcatgc 1579 Score = 42.1 bits (21), Expect = 1.9 Identities = 54/65 (83%) Strand = Plus / Plus Query: 143 caacaccccaacaactaaagaggcctactattacaggatgatcttcgagaggtacttccc 202 |||||| ||||| || ||||| || ||||| || || ||||| || ||||||| |||||| Sbjct: 1634 caacacaccaaccaccaaagaagcatactactatagaatgatatttgagaggttcttccc 1693 Query: 203 tcaga 207 ||||| Sbjct: 1694 tcaga 1698
>gb|AF014055.1| Triphysaria versicolor asparagine synthetase (AS) mRNA, complete cds Length = 2052 Score = 58.0 bits (29), Expect = 3e-05 Identities = 101/125 (80%) Strand = Plus / Plus Query: 132 atctacccacacaacaccccaacaactaaagaggcctactattacaggatgatcttcgag 191 |||| |||||| ||||| |||||||| || |||| ||||| || |||||||| |||||| Sbjct: 1450 atcttcccacataacactccaacaacaaaggagggttactactataggatgatattcgag 1509 Query: 192 aggtacttccctcagagctcggcgatcctcacggtgccaggcgggccaagcgtggcgtgc 251 ||| ||||| |||| ||| || | ||||| || ||||||||||| || ||||| ||| Sbjct: 1510 cggtttttcccacagaactcagccaagctcactgttccaggcgggccgagtgtggcttgc 1569 Query: 252 agcac 256 ||||| Sbjct: 1570 agcac 1574 Score = 52.0 bits (26), Expect = 0.002 Identities = 43/49 (87%) Strand = Plus / Plus Query: 19 tgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggat 67 |||| |||||| |||| ||||| ||||||||||| || ||||||||||| Sbjct: 1337 tgtataggcagaaagaacagttcagtgatggtgtcggatatagctggat 1385
>gb|U77678.1|GMU77678 Glycine max asparagine synthetase 2 (AS2) mRNA, complete cds Length = 2143 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 135 tacccacacaacaccccaacaactaaagaggcctactattacaggatgatcttcgagagg 194 ||||| ||||||||||||| ||| || || || || || ||||| |||||||| |||||| Sbjct: 1607 tacccccacaacaccccaaaaaccaaggaagcatattactacagaatgatctttgagagg 1666 Query: 195 tacttccctcaga 207 | ||||||||||| Sbjct: 1667 ttcttccctcaga 1679
>emb|CR932961.2| Medicago truncatula chromosome 5 clone mth2-62c4, COMPLETE SEQUENCE Length = 119142 Score = 54.0 bits (27), Expect = 5e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 132 atctacccacacaacaccccaacaactaaagaggcctactattacaggatgatcttcgag 191 |||||||| ||||||||||||| || || || || ||||| || || |||||||| ||| Sbjct: 74787 atctacccccacaacaccccaaacaccaaggaagcatactactatagaatgatctttgag 74846 Query: 192 aggtacttccctcag 206 |||| |||||||||| Sbjct: 74847 aggttcttccctcag 74861
>emb|X82849.1|ZMASPSY Z.mays mRNA for aspargine synthetase Length = 2135 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 162 gaggcctactattacaggatgatcttcgagaggtacttccctcagagctcggcga 216 ||||||||||| ||| ||||||| ||||||||| |||||||||| |||||||| Sbjct: 1480 gaggcctactactaccggatgatattcgagaggctcttccctcaggactcggcga 1534
>gb|AF061740.1| Elaeagnus umbellata asparagine synthetase (AS) mRNA, complete cds Length = 2092 Score = 52.0 bits (26), Expect = 0.002 Identities = 82/101 (81%) Strand = Plus / Plus Query: 15 attctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgatggc 74 |||||||| ||||| | || || |||||||| || ||||| ||||| |||||||||||| Sbjct: 1425 attctgtatcggcagaaggaacaatttagtgacggggttggttatagttggattgatggc 1484 Query: 75 cttaaggatcatgcagcatcaaatgtgagtgataagatgat 115 ||||| | ||||| || | |||||| |||||||||||| Sbjct: 1485 cttaaagcgcatgctgctaaacatgtgactgataagatgat 1525
>gb|U77679.1|GMU77679 Glycine max asparagine synthetase 1 (AS1) mRNA, complete cds Length = 2108 Score = 52.0 bits (26), Expect = 0.002 Identities = 55/65 (84%) Strand = Plus / Plus Query: 24 aggcagnaagagcagtttagtgatggtgttgggtatagctggattgatggccttaaggat 83 |||||| |||| || || |||||||| ||||| ||| | ||||||||||||||||| | | Sbjct: 1492 aggcagaaagaacaattcagtgatggagttggctatggttggattgatggccttaaagct 1551 Query: 84 catgc 88 ||||| Sbjct: 1552 catgc 1556
>gb|U89923.1|MSU89923 Medicago sativa asparagine synthetase mRNA, complete cds Length = 2184 Score = 52.0 bits (26), Expect = 0.002 Identities = 55/65 (84%) Strand = Plus / Plus Query: 24 aggcagnaagagcagtttagtgatggtgttgggtatagctggattgatggccttaaggat 83 |||||| | || ||||| |||||||| ||||| ||| | |||||||||||| ||||||| Sbjct: 1528 aggcagaaggaacagttcagtgatggagttggctatggttggattgatggcattaaggac 1587 Query: 84 catgc 88 ||||| Sbjct: 1588 catgc 1592
>gb|L40327.1|ALFASPSYN Medicago sativa asparagine synthetase gene, exons 1-13 and complete cds Length = 7969 Score = 52.0 bits (26), Expect = 0.002 Identities = 55/65 (84%) Strand = Plus / Plus Query: 24 aggcagnaagagcagtttagtgatggtgttgggtatagctggattgatggccttaaggat 83 |||||| | |||||||| |||||||| ||||| ||| | ||||||||||| ||||||| Sbjct: 6567 aggcagaaggagcagttcagtgatggagttggctatggttggattgatggtattaaggac 6626 Query: 84 catgc 88 ||||| Sbjct: 6627 catgc 6631
>dbj|AB035248.1| Astragalus sinicus AsAS2 mRNA for asparagine synthetase, complete cds Length = 2133 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 171 tattacaggatgatcttcgagaggtacttccctcagagctcggcga 216 |||||| | |||||||||||||||| |||||||||| |||||||| Sbjct: 1575 tattaccgaatgatcttcgagaggtttttccctcagaactcggcga 1620 Score = 52.0 bits (26), Expect = 0.002 Identities = 55/65 (84%) Strand = Plus / Plus Query: 24 aggcagnaagagcagtttagtgatggtgttgggtatagctggattgatggccttaaggat 83 |||||| |||| || || |||||||| ||||| ||| |||||||||||||| | ||||| Sbjct: 1428 aggcagaaagaacaattcagtgatggagttggctatggctggattgatggcataaaggac 1487 Query: 84 catgc 88 ||||| Sbjct: 1488 catgc 1492
>gb|AF190728.1| Helianthus annuus asparagine synthetase (HAS1) mRNA, complete cds Length = 1971 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 31 aagagcagtttagtgatggtgttgggtatagctggat 67 |||| ||||||||||| || ||||||||||||||||| Sbjct: 1376 aagaacagtttagtgacggagttgggtatagctggat 1412
>emb|AJ133522.1|PVU133522 Phaseolus vulgaris mRNA for asparagine synthetase type-I Length = 2086 Score = 50.1 bits (25), Expect = 0.008 Identities = 48/56 (85%) Strand = Plus / Plus Query: 24 aggcagnaagagcagtttagtgatggtgttgggtatagctggattgatggccttaa 79 |||||| |||| || || |||||||| ||||| ||| | ||||||||||||||||| Sbjct: 1489 aggcagaaagaacaattcagtgatggagttggttatggttggattgatggccttaa 1544
>ref|XM_561050.1| Anopheles gambiae str. PEST ENSANGP00000025823 (ENSANGG00000022672), partial mRNA Length = 1158 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 31 aagagcagtttagtgatggtgttgggtatagctggat 67 ||||||| |||||||||||||| || ||||||||||| Sbjct: 845 aagagcaatttagtgatggtgtcggctatagctggat 881
>gb|AY103777.1| Zea mays PCO113531 mRNA sequence Length = 2209 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 162 gaggcctactattacaggatgatcttcgagaggtacttccctcag 206 ||||||||||| ||| ||||||| ||||||||| |||||||||| Sbjct: 1574 gaggcctactactaccggatgatattcgagaggctcttccctcag 1618
>gb|BT013473.1| Lycopersicon esculentum clone 132134R, mRNA sequence Length = 1923 Score = 48.1 bits (24), Expect = 0.031 Identities = 56/67 (83%) Strand = Plus / Plus Query: 19 tgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgatggcctta 78 |||| |||||| | || ||||| |||||||| ||||| || || |||||||||||| | | Sbjct: 1403 tgtataggcagaaggaacagttcagtgatggagttggctacagttggattgatggcttga 1462 Query: 79 aggatca 85 ||||||| Sbjct: 1463 aggatca 1469
>emb|Z72354.1|VFAS1 V.faba mRNA for asparagine synthetase Length = 2154 Score = 48.1 bits (24), Expect = 0.031 Identities = 69/84 (82%) Strand = Plus / Plus Query: 42 agtgatggtgttgggtatagctggattgatggccttaaggatcatgcagcatcaaatgtg 101 |||||||| ||||| ||| |||||||||||||| | || || ||||||||| | |||| Sbjct: 1480 agtgatggagttggatatggctggattgatggcatcaaagaccatgcagcaaaacatgtc 1539 Query: 102 agtgataagatgatgtccaatgca 125 | ||| || ||||||| ||||||| Sbjct: 1540 actgacaaaatgatgttcaatgca 1563
>gb|AF263432.1| Helianthus annuus asparagine synthetase (HAS1.1) mRNA, complete cds Length = 2035 Score = 48.1 bits (24), Expect = 0.031 Identities = 41/47 (87%) Strand = Plus / Plus Query: 27 cagnaagagcagtttagtgatggtgttgggtatagctggattgatgg 73 ||| |||| |||||||| ||||| || || ||||||||||||||||| Sbjct: 1393 cagaaagaacagtttagcgatggagtcggatatagctggattgatgg 1439 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 238 caagcgtggcgtgcagcacagccaaggcaatagagtgggacgc 280 |||||||||| |||||||| || || ||||| ||||||||||| Sbjct: 1604 caagcgtggcttgcagcactgcaaaagcaatcgagtgggacgc 1646
>emb|AJ496567.2|PSY496567 Pinus sylvestris mRNA for putative asparagine synthetase (asn1 gene) Length = 2110 Score = 48.1 bits (24), Expect = 0.031 Identities = 53/63 (84%) Strand = Plus / Plus Query: 12 cacattctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgat 71 |||||||||||||| ||| | | ||| || || ||||| ||||| || |||||||||||| Sbjct: 1422 cacattctgtacagacagaaggggcaattcagcgatggggttggctacagctggattgat 1481 Query: 72 ggc 74 ||| Sbjct: 1482 ggc 1484 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Plus Query: 222 acggtgccaggcgggccaagcgtggcgtgcagcacagccaaggca 266 ||||| || ||||||||||||||||| || ||||| || |||||| Sbjct: 1632 acggtcccgggcgggccaagcgtggcttgtagcaccgcaaaggca 1676
>gb|AE017131.1| Yersinia pestis biovar Medievalis str. 91001 section 5 of 16 of the complete genome Length = 291847 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 44 tgatggtgttgggtatagctggattga 70 |||||||||||| |||||||||||||| Sbjct: 10448 tgatggtgttggctatagctggattga 10474
>gb|AE009952.1| Yersinia pestis KIM, complete genome Length = 4600755 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 44 tgatggtgttgggtatagctggattga 70 |||||||||||| |||||||||||||| Sbjct: 1343541 tgatggtgttggctatagctggattga 1343515
>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence Length = 4744671 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 44 tgatggtgttgggtatagctggattga 70 |||||||||||| |||||||||||||| Sbjct: 1336342 tgatggtgttggctatagctggattga 1336316
>emb|AJ414153.1| Yersinia pestis strain CO92 complete genome; segment 13/20 Length = 258050 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 44 tgatggtgttgggtatagctggattga 70 |||||||||||| |||||||||||||| Sbjct: 34251 tgatggtgttggctatagctggattga 34225
>gb|AF530460.1| Striga hermonthica asparagine synthetase (AS) mRNA, complete cds Length = 2278 Score = 46.1 bits (23), Expect = 0.12 Identities = 46/54 (85%) Strand = Plus / Plus Query: 21 tacaggcagnaagagcagtttagtgatggtgttgggtatagctggattgatggc 74 ||||| ||| |||| |||||||| ||||| ||||| || || |||||||||||| Sbjct: 1582 tacagacagaaagaacagtttagcgatggagttggatacagttggattgatggc 1635
>gb|DQ455293.1| Medicago truncatula cDNA-AFLP fragment BT11M44_226 sequence Length = 277 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Plus Query: 36 cagtttagtgatggtgttgggtatagctggattgatgg 73 ||||| |||||||| ||||| ||| ||||||||||||| Sbjct: 221 cagttcagtgatggagttggctatggctggattgatgg 258
>emb|CR378666.1| Photobacterium profundum SS9; segment 4/12 Length = 348313 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 44 tgatggtgttgggtatagctggattgatggcct 76 ||||||||| || ||||||||||||||| |||| Sbjct: 95658 tgatggtgtcggctatagctggattgatagcct 95626
>gb|AC083797.16| Homo sapiens 3 BAC RP11-114A6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 157113 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 526 tttaaaagattctcttggcct 546 ||||||||||||||||||||| Sbjct: 124208 tttaaaagattctcttggcct 124228
>gb|AC103562.6| Homo sapiens BAC clone RP11-608O21 from 4, complete sequence Length = 147301 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 524 aatttaaaagattctcttggc 544 ||||||||||||||||||||| Sbjct: 32069 aatttaaaagattctcttggc 32049
>gb|AC163295.2| Mus musculus BAC clone RP23-132K20 from chromosome 14, complete sequence Length = 212576 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 523 taatttaaaagattctcttggcct 546 ||||||||||||||||||| |||| Sbjct: 152339 taatttaaaagattctctttgcct 152316
>gb|AY240926.1| Lycopersicon esculentum asparagine synthetase (AS1) mRNA, partial cds Length = 730 Score = 40.1 bits (20), Expect = 7.7 Identities = 46/55 (83%) Strand = Plus / Plus Query: 15 attctgtacaggcagnaagagcagtttagtgatggtgttgggtatagctggattg 69 ||||||||||||||| |||| || || || ||||| ||||| || || ||||||| Sbjct: 676 attctgtacaggcagaaagaacaattcagcgatggcgttggatacagttggattg 730
>emb|BX248586.1| Blochmannia floridanus complete genome; segment 3/3 Length = 188557 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 acacaacaccccaacaacta 159 |||||||||||||||||||| Sbjct: 129383 acacaacaccccaacaacta 129402
>emb|AL606506.11| Mouse DNA sequence from clone RP23-11A24 on chromosome 11 Contains a novel pseudogene and two CpG islands, complete sequence Length = 213971 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 ttaatttaaaagattctctt 541 |||||||||||||||||||| Sbjct: 34135 ttaatttaaaagattctctt 34116
>emb|AL671560.7| Mouse DNA sequence from clone RP23-149A5 on chromosome 1 Contains the 3' end of the Nrp2 gene for neuropilin 2, complete sequence Length = 157987 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 ctacccacacaacaccccaa 153 |||||||||||||||||||| Sbjct: 43120 ctacccacacaacaccccaa 43101
>emb|BX005459.6| Zebrafish DNA sequence from clone CH211-214N22 in linkage group 6, complete sequence Length = 211210 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 aggatcatgcagcatcaaatgtga 102 ||||||||||| |||||||||||| Sbjct: 167941 aggatcatgcatcatcaaatgtga 167918
>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence Length = 2906179 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 tgatggtgttgggtatagctggat 67 |||||||||||| ||||||||||| Sbjct: 881877 tgatggtgttggatatagctggat 881854
>emb|CT033786.13| Mouse DNA sequence from clone RP24-298F18 on chromosome 14, complete sequence Length = 185421 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 523 taatttaaaagattctcttggcct 546 ||||||||||||||||||| |||| Sbjct: 56400 taatttaaaagattctctttgcct 56377
>gb|AC154579.3| Mus musculus BAC clone RP23-376B1 from chromosome 17, complete sequence Length = 193686 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 accccaacaactaaagaggc 166 |||||||||||||||||||| Sbjct: 57377 accccaacaactaaagaggc 57358
>gb|AC153541.4| Mus musculus 10 BAC RP23-80P5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 222655 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 455 ctaaagacatatatgatgca 474 |||||||||||||||||||| Sbjct: 156564 ctaaagacatatatgatgca 156545 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,005,173 Number of Sequences: 3902068 Number of extensions: 4005173 Number of successful extensions: 72608 Number of sequences better than 10.0: 89 Number of HSP's better than 10.0 without gapping: 89 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 72380 Number of HSP's gapped (non-prelim): 226 length of query: 564 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 541 effective length of database: 17,143,297,704 effective search space: 9274524057864 effective search space used: 9274524057864 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
