Clone Name | bags9n03 |
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Clone Library Name | barley_pub |
>ref|XM_464159.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2339 Score = 293 bits (148), Expect = 3e-76 Identities = 448/544 (82%), Gaps = 7/544 (1%) Strand = Plus / Plus Query: 4 tccaattgttcaggnaagtccgctttattctccaaacgatgatattccaggctttatatc 63 |||||||||||||| | |||| |||||||||||||| ||||||||||||| ||| ||||| Sbjct: 999 tccaattgttcaggga-gtccactttattctccaaatgatgatattccagacttcatatc 1057 Query: 64 agcagatttcactgatgcggaaggattctaccacaccaattcaaatttaggaattgattc 123 ||||||||||| |||||| |||||||||| | | ||||||| ||||||| |||| Sbjct: 1058 agcagatttcaatgatgctgaaggattctgtcgtgaaagttcaaatctaggaatcgattt 1117 Query: 124 tggggatgatgatgctgccgagatgcttacctaccaaaggccaaagaaagaggttgatta 183 ||| || |||| | || ||||| |||||| |||||||||||| | ||| ||||| || Sbjct: 1118 tggtgaagatggtttggctgagattcttacccaccaaaggccaagaagagatgttgacta 1177 Query: 184 taaaagacttaatgaggaaatgtttggaaagctgactgacaatgaaaagcagagtgaaga 243 || | |||||||||| ||||||||||| ||| | || |||||| | ||||||||||| Sbjct: 1178 tacacaacttaatgagcaaatgtttggagagcctattggcaatgacgaacagagtgaaga 1237 Query: 244 tgaagattggggtactagtaataagagaaagaaaagaagagtggattcagctggtgttgg 303 ||||||||||||| || ||| |||||||||||||||||| | |||| |||||||||| Sbjct: 1238 tgaagattggggt-ct--taacaagagaaagaaaagaagaactggttcaactggtgttgg 1294 Query: 304 agttaagtctgccgagggtttctcagatgtaaaatcaaatgagaaagtccaaccgcagag 363 ||| || | |||||| |||||||| ||||| ||| |||||| |||||| | | Sbjct: 1295 gactaattccgtagagggtcgatcagatgtcaaatccaataagaaagcccaacctc---g 1351 Query: 364 gagaaaacttttcagaattcctcctgaggcagttcaggtactacgcaaatcttttgctga 423 ||||||||||||||| |||||||||| ||||||| |||| || || ||| |||||||||| Sbjct: 1352 gagaaaacttttcaggattcctcctgcggcagttgaggtgctccgtaaagcttttgctga 1411 Query: 424 aagcgagcttccaacccgggaggtgaaagagaatctctcaacagaattgggtatttcatt 483 || |||||||| ||||| || ||||| |||||||||||||| |||||||||| || Sbjct: 1412 aaatgagcttcctgcccggagtgtcaaagaaaatctctcaacagagctgggtatttcttt 1471 Query: 484 tgaaaagattgacaagtggttcaaaaatacaaggtgtgctgctctcagagatcggaaggc 543 |||||||||||| |||||||||||||||||| |||||||||||||||| ||| |||||| Sbjct: 1472 tgaaaagattgataagtggttcaaaaatacacggtgtgctgctctcagggataggaaggg 1531 Query: 544 tgaa 547 |||| Sbjct: 1532 tgaa 1535
>ref|XM_507438.1| PREDICTED Oryza sativa (japonica cultivar-group), P0479D12.6 patrial mRNA Length = 2342 Score = 293 bits (148), Expect = 3e-76 Identities = 448/544 (82%), Gaps = 7/544 (1%) Strand = Plus / Plus Query: 4 tccaattgttcaggnaagtccgctttattctccaaacgatgatattccaggctttatatc 63 |||||||||||||| | |||| |||||||||||||| ||||||||||||| ||| ||||| Sbjct: 999 tccaattgttcaggga-gtccactttattctccaaatgatgatattccagacttcatatc 1057 Query: 64 agcagatttcactgatgcggaaggattctaccacaccaattcaaatttaggaattgattc 123 ||||||||||| |||||| |||||||||| | | ||||||| ||||||| |||| Sbjct: 1058 agcagatttcaatgatgctgaaggattctgtcgtgaaagttcaaatctaggaatcgattt 1117 Query: 124 tggggatgatgatgctgccgagatgcttacctaccaaaggccaaagaaagaggttgatta 183 ||| || |||| | || ||||| |||||| |||||||||||| | ||| ||||| || Sbjct: 1118 tggtgaagatggtttggctgagattcttacccaccaaaggccaagaagagatgttgacta 1177 Query: 184 taaaagacttaatgaggaaatgtttggaaagctgactgacaatgaaaagcagagtgaaga 243 || | |||||||||| ||||||||||| ||| | || |||||| | ||||||||||| Sbjct: 1178 tacacaacttaatgagcaaatgtttggagagcctattggcaatgacgaacagagtgaaga 1237 Query: 244 tgaagattggggtactagtaataagagaaagaaaagaagagtggattcagctggtgttgg 303 ||||||||||||| || ||| |||||||||||||||||| | |||| |||||||||| Sbjct: 1238 tgaagattggggt-ct--taacaagagaaagaaaagaagaactggttcaactggtgttgg 1294 Query: 304 agttaagtctgccgagggtttctcagatgtaaaatcaaatgagaaagtccaaccgcagag 363 ||| || | |||||| |||||||| ||||| ||| |||||| |||||| | | Sbjct: 1295 gactaattccgtagagggtcgatcagatgtcaaatccaataagaaagcccaacctc---g 1351 Query: 364 gagaaaacttttcagaattcctcctgaggcagttcaggtactacgcaaatcttttgctga 423 ||||||||||||||| |||||||||| ||||||| |||| || || ||| |||||||||| Sbjct: 1352 gagaaaacttttcaggattcctcctgcggcagttgaggtgctccgtaaagcttttgctga 1411 Query: 424 aagcgagcttccaacccgggaggtgaaagagaatctctcaacagaattgggtatttcatt 483 || |||||||| ||||| || ||||| |||||||||||||| |||||||||| || Sbjct: 1412 aaatgagcttcctgcccggagtgtcaaagaaaatctctcaacagagctgggtatttcttt 1471 Query: 484 tgaaaagattgacaagtggttcaaaaatacaaggtgtgctgctctcagagatcggaaggc 543 |||||||||||| |||||||||||||||||| |||||||||||||||| ||| |||||| Sbjct: 1472 tgaaaagattgataagtggttcaaaaatacacggtgtgctgctctcagggataggaaggg 1531 Query: 544 tgaa 547 |||| Sbjct: 1532 tgaa 1535
>ref|XM_506720.1| PREDICTED Oryza sativa (japonica cultivar-group), P0479D12.6 patrial mRNA Length = 2342 Score = 293 bits (148), Expect = 3e-76 Identities = 448/544 (82%), Gaps = 7/544 (1%) Strand = Plus / Plus Query: 4 tccaattgttcaggnaagtccgctttattctccaaacgatgatattccaggctttatatc 63 |||||||||||||| | |||| |||||||||||||| ||||||||||||| ||| ||||| Sbjct: 999 tccaattgttcaggga-gtccactttattctccaaatgatgatattccagacttcatatc 1057 Query: 64 agcagatttcactgatgcggaaggattctaccacaccaattcaaatttaggaattgattc 123 ||||||||||| |||||| |||||||||| | | ||||||| ||||||| |||| Sbjct: 1058 agcagatttcaatgatgctgaaggattctgtcgtgaaagttcaaatctaggaatcgattt 1117 Query: 124 tggggatgatgatgctgccgagatgcttacctaccaaaggccaaagaaagaggttgatta 183 ||| || |||| | || ||||| |||||| |||||||||||| | ||| ||||| || Sbjct: 1118 tggtgaagatggtttggctgagattcttacccaccaaaggccaagaagagatgttgacta 1177 Query: 184 taaaagacttaatgaggaaatgtttggaaagctgactgacaatgaaaagcagagtgaaga 243 || | |||||||||| ||||||||||| ||| | || |||||| | ||||||||||| Sbjct: 1178 tacacaacttaatgagcaaatgtttggagagcctattggcaatgacgaacagagtgaaga 1237 Query: 244 tgaagattggggtactagtaataagagaaagaaaagaagagtggattcagctggtgttgg 303 ||||||||||||| || ||| |||||||||||||||||| | |||| |||||||||| Sbjct: 1238 tgaagattggggt-ct--taacaagagaaagaaaagaagaactggttcaactggtgttgg 1294 Query: 304 agttaagtctgccgagggtttctcagatgtaaaatcaaatgagaaagtccaaccgcagag 363 ||| || | |||||| |||||||| ||||| ||| |||||| |||||| | | Sbjct: 1295 gactaattccgtagagggtcgatcagatgtcaaatccaataagaaagcccaacctc---g 1351 Query: 364 gagaaaacttttcagaattcctcctgaggcagttcaggtactacgcaaatcttttgctga 423 ||||||||||||||| |||||||||| ||||||| |||| || || ||| |||||||||| Sbjct: 1352 gagaaaacttttcaggattcctcctgcggcagttgaggtgctccgtaaagcttttgctga 1411 Query: 424 aagcgagcttccaacccgggaggtgaaagagaatctctcaacagaattgggtatttcatt 483 || |||||||| ||||| || ||||| |||||||||||||| |||||||||| || Sbjct: 1412 aaatgagcttcctgcccggagtgtcaaagaaaatctctcaacagagctgggtatttcttt 1471 Query: 484 tgaaaagattgacaagtggttcaaaaatacaaggtgtgctgctctcagagatcggaaggc 543 |||||||||||| |||||||||||||||||| |||||||||||||||| ||| |||||| Sbjct: 1472 tgaaaagattgataagtggttcaaaaatacacggtgtgctgctctcagggataggaaggg 1531 Query: 544 tgaa 547 |||| Sbjct: 1532 tgaa 1535
>dbj|AK098855.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000I05, full insert sequence Length = 2598 Score = 293 bits (148), Expect = 3e-76 Identities = 448/544 (82%), Gaps = 7/544 (1%) Strand = Plus / Plus Query: 4 tccaattgttcaggnaagtccgctttattctccaaacgatgatattccaggctttatatc 63 |||||||||||||| | |||| |||||||||||||| ||||||||||||| ||| ||||| Sbjct: 1258 tccaattgttcaggga-gtccactttattctccaaatgatgatattccagacttcatatc 1316 Query: 64 agcagatttcactgatgcggaaggattctaccacaccaattcaaatttaggaattgattc 123 ||||||||||| |||||| |||||||||| | | ||||||| ||||||| |||| Sbjct: 1317 agcagatttcaatgatgctgaaggattctgtcgtgaaagttcaaatctaggaatcgattt 1376 Query: 124 tggggatgatgatgctgccgagatgcttacctaccaaaggccaaagaaagaggttgatta 183 ||| || |||| | || ||||| |||||| |||||||||||| | ||| ||||| || Sbjct: 1377 tggtgaagatggtttggctgagattcttacccaccaaaggccaagaagagatgttgacta 1436 Query: 184 taaaagacttaatgaggaaatgtttggaaagctgactgacaatgaaaagcagagtgaaga 243 || | |||||||||| ||||||||||| ||| | || |||||| | ||||||||||| Sbjct: 1437 tacacaacttaatgagcaaatgtttggagagcctattggcaatgacgaacagagtgaaga 1496 Query: 244 tgaagattggggtactagtaataagagaaagaaaagaagagtggattcagctggtgttgg 303 ||||||||||||| || ||| |||||||||||||||||| | |||| |||||||||| Sbjct: 1497 tgaagattggggt-ct--taacaagagaaagaaaagaagaactggttcaactggtgttgg 1553 Query: 304 agttaagtctgccgagggtttctcagatgtaaaatcaaatgagaaagtccaaccgcagag 363 ||| || | |||||| |||||||| ||||| ||| |||||| |||||| | | Sbjct: 1554 gactaattccgtagagggtcgatcagatgtcaaatccaataagaaagcccaacctc---g 1610 Query: 364 gagaaaacttttcagaattcctcctgaggcagttcaggtactacgcaaatcttttgctga 423 ||||||||||||||| |||||||||| ||||||| |||| || || ||| |||||||||| Sbjct: 1611 gagaaaacttttcaggattcctcctgcggcagttgaggtgctccgtaaagcttttgctga 1670 Query: 424 aagcgagcttccaacccgggaggtgaaagagaatctctcaacagaattgggtatttcatt 483 || |||||||| ||||| || ||||| |||||||||||||| |||||||||| || Sbjct: 1671 aaatgagcttcctgcccggagtgtcaaagaaaatctctcaacagagctgggtatttcttt 1730 Query: 484 tgaaaagattgacaagtggttcaaaaatacaaggtgtgctgctctcagagatcggaaggc 543 |||||||||||| |||||||||||||||||| |||||||||||||||| ||| |||||| Sbjct: 1731 tgaaaagattgataagtggttcaaaaatacacggtgtgctgctctcagggataggaaggg 1790 Query: 544 tgaa 547 |||| Sbjct: 1791 tgaa 1794
>dbj|AK070502.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023051F17, full insert sequence Length = 2601 Score = 293 bits (148), Expect = 3e-76 Identities = 448/544 (82%), Gaps = 7/544 (1%) Strand = Plus / Plus Query: 4 tccaattgttcaggnaagtccgctttattctccaaacgatgatattccaggctttatatc 63 |||||||||||||| | |||| |||||||||||||| ||||||||||||| ||| ||||| Sbjct: 1258 tccaattgttcaggga-gtccactttattctccaaatgatgatattccagacttcatatc 1316 Query: 64 agcagatttcactgatgcggaaggattctaccacaccaattcaaatttaggaattgattc 123 ||||||||||| |||||| |||||||||| | | ||||||| ||||||| |||| Sbjct: 1317 agcagatttcaatgatgctgaaggattctgtcgtgaaagttcaaatctaggaatcgattt 1376 Query: 124 tggggatgatgatgctgccgagatgcttacctaccaaaggccaaagaaagaggttgatta 183 ||| || |||| | || ||||| |||||| |||||||||||| | ||| ||||| || Sbjct: 1377 tggtgaagatggtttggctgagattcttacccaccaaaggccaagaagagatgttgacta 1436 Query: 184 taaaagacttaatgaggaaatgtttggaaagctgactgacaatgaaaagcagagtgaaga 243 || | |||||||||| ||||||||||| ||| | || |||||| | ||||||||||| Sbjct: 1437 tacacaacttaatgagcaaatgtttggagagcctattggcaatgacgaacagagtgaaga 1496 Query: 244 tgaagattggggtactagtaataagagaaagaaaagaagagtggattcagctggtgttgg 303 ||||||||||||| || ||| |||||||||||||||||| | |||| |||||||||| Sbjct: 1497 tgaagattggggt-ct--taacaagagaaagaaaagaagaactggttcaactggtgttgg 1553 Query: 304 agttaagtctgccgagggtttctcagatgtaaaatcaaatgagaaagtccaaccgcagag 363 ||| || | |||||| |||||||| ||||| ||| |||||| |||||| | | Sbjct: 1554 gactaattccgtagagggtcgatcagatgtcaaatccaataagaaagcccaacctc---g 1610 Query: 364 gagaaaacttttcagaattcctcctgaggcagttcaggtactacgcaaatcttttgctga 423 ||||||||||||||| |||||||||| ||||||| |||| || || ||| |||||||||| Sbjct: 1611 gagaaaacttttcaggattcctcctgcggcagttgaggtgctccgtaaagcttttgctga 1670 Query: 424 aagcgagcttccaacccgggaggtgaaagagaatctctcaacagaattgggtatttcatt 483 || |||||||| ||||| || ||||| |||||||||||||| |||||||||| || Sbjct: 1671 aaatgagcttcctgcccggagtgtcaaagaaaatctctcaacagagctgggtatttcttt 1730 Query: 484 tgaaaagattgacaagtggttcaaaaatacaaggtgtgctgctctcagagatcggaaggc 543 |||||||||||| |||||||||||||||||| |||||||||||||||| ||| |||||| Sbjct: 1731 tgaaaagattgataagtggttcaaaaatacacggtgtgctgctctcagggataggaaggg 1790 Query: 544 tgaa 547 |||| Sbjct: 1791 tgaa 1794
>dbj|AK065257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002J16, full insert sequence Length = 2601 Score = 293 bits (148), Expect = 3e-76 Identities = 448/544 (82%), Gaps = 7/544 (1%) Strand = Plus / Plus Query: 4 tccaattgttcaggnaagtccgctttattctccaaacgatgatattccaggctttatatc 63 |||||||||||||| | |||| |||||||||||||| ||||||||||||| ||| ||||| Sbjct: 1258 tccaattgttcaggga-gtccactttattctccaaatgatgatattccagacttcatatc 1316 Query: 64 agcagatttcactgatgcggaaggattctaccacaccaattcaaatttaggaattgattc 123 ||||||||||| |||||| |||||||||| | | ||||||| ||||||| |||| Sbjct: 1317 agcagatttcaatgatgctgaaggattctgtcgtgaaagttcaaatctaggaatcgattt 1376 Query: 124 tggggatgatgatgctgccgagatgcttacctaccaaaggccaaagaaagaggttgatta 183 ||| || |||| | || ||||| |||||| |||||||||||| | ||| ||||| || Sbjct: 1377 tggtgaagatggtttggctgagattcttacccaccaaaggccaagaagagatgttgacta 1436 Query: 184 taaaagacttaatgaggaaatgtttggaaagctgactgacaatgaaaagcagagtgaaga 243 || | |||||||||| ||||||||||| ||| | || |||||| | ||||||||||| Sbjct: 1437 tacacaacttaatgagcaaatgtttggagagcctattggcaatgacgaacagagtgaaga 1496 Query: 244 tgaagattggggtactagtaataagagaaagaaaagaagagtggattcagctggtgttgg 303 ||||||||||||| || ||| |||||||||||||||||| | |||| |||||||||| Sbjct: 1497 tgaagattggggt-ct--taacaagagaaagaaaagaagaactggttcaactggtgttgg 1553 Query: 304 agttaagtctgccgagggtttctcagatgtaaaatcaaatgagaaagtccaaccgcagag 363 ||| || | |||||| |||||||| ||||| ||| |||||| |||||| | | Sbjct: 1554 gactaattccgtagagggtcgatcagatgtcaaatccaataagaaagcccaacctc---g 1610 Query: 364 gagaaaacttttcagaattcctcctgaggcagttcaggtactacgcaaatcttttgctga 423 ||||||||||||||| |||||||||| ||||||| |||| || || ||| |||||||||| Sbjct: 1611 gagaaaacttttcaggattcctcctgcggcagttgaggtgctccgtaaagcttttgctga 1670 Query: 424 aagcgagcttccaacccgggaggtgaaagagaatctctcaacagaattgggtatttcatt 483 || |||||||| ||||| || ||||| |||||||||||||| |||||||||| || Sbjct: 1671 aaatgagcttcctgcccggagtgtcaaagaaaatctctcaacagagctgggtatttcttt 1730 Query: 484 tgaaaagattgacaagtggttcaaaaatacaaggtgtgctgctctcagagatcggaaggc 543 |||||||||||| |||||||||||||||||| |||||||||||||||| ||| |||||| Sbjct: 1731 tgaaaagattgataagtggttcaaaaatacacggtgtgctgctctcagggataggaaggg 1790 Query: 544 tgaa 547 |||| Sbjct: 1791 tgaa 1794
>dbj|AK106225.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-A04, full insert sequence Length = 1569 Score = 139 bits (70), Expect = 1e-29 Identities = 208/253 (82%), Gaps = 1/253 (0%) Strand = Plus / Plus Query: 4 tccaattgttcaggnaagtccgctttattctccaaacgatgatattccaggctttatatc 63 |||||||||||||| | |||| |||||||||||||| ||||||||||||| ||| ||||| Sbjct: 1312 tccaattgttcaggga-gtccactttattctccaaatgatgatattccagacttcatatc 1370 Query: 64 agcagatttcactgatgcggaaggattctaccacaccaattcaaatttaggaattgattc 123 ||||||||||| |||||| |||||||||| | | ||||||| ||||||| |||| Sbjct: 1371 agcagatttcaatgatgctgaaggattctgtcgtgaaagttcaaatctaggaatcgattt 1430 Query: 124 tggggatgatgatgctgccgagatgcttacctaccaaaggccaaagaaagaggttgatta 183 ||| || |||| | || ||||| |||||| |||||||||||| | ||| ||||| || Sbjct: 1431 tggtgaagatggtttggctgagattcttacccaccaaaggccaagaagagatgttgacta 1490 Query: 184 taaaagacttaatgaggaaatgtttggaaagctgactgacaatgaaaagcagagtgaaga 243 || | |||||||||| ||||||||||| ||| | || |||||| | ||||||||||| Sbjct: 1491 tacacaacttaatgagcaaatgtttggagagcctattggcaatgacgaacagagtgaaga 1550 Query: 244 tgaagattggggt 256 ||||||||||||| Sbjct: 1551 tgaagattggggt 1563
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 107 bits (54), Expect = 4e-20 Identities = 81/89 (91%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 4 tccaattgttcaggnaagtccgctttattctccaaacgatgatattccaggctttatatc 63 |||||||||||||| | |||| |||||||||||||| ||||||||||||| ||| ||||| Sbjct: 2623770 tccaattgttcaggga-gtccactttattctccaaatgatgatattccagacttcatatc 2623828 Query: 64 agcagatttcactgatgcggaaggattct 92 ||||||||||| |||||| |||||||||| Sbjct: 2623829 agcagatttcaatgatgctgaaggattct 2623857 Score = 83.8 bits (42), Expect = 6e-13 Identities = 165/203 (81%), Gaps = 6/203 (2%) Strand = Plus / Plus Query: 201 aaatgtttggaaagctgactgacaatgaaaagcagagtgaagatgaagattggggtacta 260 ||||||||||| ||| | || |||||| | |||||||||||||||||||||||| || Sbjct: 2624114 aaatgtttggagagcctattggcaatgacgaacagagtgaagatgaagattggggt-ct- 2624171 Query: 261 gtaataagagaaagaaaagaagagtggattcagctggtgttggagttaagtctgccgagg 320 ||| |||||||||||||||||| | |||| |||||||||| ||| || | |||| Sbjct: 2624172 -taacaagagaaagaaaagaagaactggttcaactggtgttgggactaattccgtagagg 2624230 Query: 321 gtttctcagatgtaaaatcaaatgagaaagtccaaccgcagaggagaaaacttttcagaa 380 || |||||||| ||||| ||| |||||| |||||| | |||||||||||||||| | Sbjct: 2624231 gtcgatcagatgtcaaatccaataagaaagcccaacctc---ggagaaaacttttcagga 2624287 Query: 381 ttcctcctgaggcagttcaggta 403 ||||||||| ||||||| ||||| Sbjct: 2624288 ttcctcctgcggcagttgaggta 2624310 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 489 agattgacaagtggttcaaaaatacaaggtgtgctgctctcagagatcggaaggc 543 ||||||| |||||||||||||||||| |||||||||||||||| ||| ||||||| Sbjct: 2624885 agattgataagtggttcaaaaatacacggtgtgctgctctcagggataggaaggc 2624939 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 414 cttttgctgaaagcgagcttccaacccgggaggtgaaagagaatctctcaacagaattgg 473 |||||||||||| |||||||| ||||| || ||||| |||||||||||||| ||| Sbjct: 2624518 cttttgctgaaaatgagcttcctgcccggagtgtcaaagaaaatctctcaacagagctgg 2624577 Query: 474 gtatttcatttgaaaag 490 ||||||| ||||||||| Sbjct: 2624578 gtatttcttttgaaaag 2624594
>dbj|AP005288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1008_C03 Length = 103297 Score = 107 bits (54), Expect = 4e-20 Identities = 81/89 (91%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 4 tccaattgttcaggnaagtccgctttattctccaaacgatgatattccaggctttatatc 63 |||||||||||||| | |||| |||||||||||||| ||||||||||||| ||| ||||| Sbjct: 102553 tccaattgttcaggga-gtccactttattctccaaatgatgatattccagacttcatatc 102611 Query: 64 agcagatttcactgatgcggaaggattct 92 ||||||||||| |||||| |||||||||| Sbjct: 102612 agcagatttcaatgatgctgaaggattct 102640 Score = 83.8 bits (42), Expect = 6e-13 Identities = 165/203 (81%), Gaps = 6/203 (2%) Strand = Plus / Plus Query: 201 aaatgtttggaaagctgactgacaatgaaaagcagagtgaagatgaagattggggtacta 260 ||||||||||| ||| | || |||||| | |||||||||||||||||||||||| || Sbjct: 102897 aaatgtttggagagcctattggcaatgacgaacagagtgaagatgaagattggggt-ct- 102954 Query: 261 gtaataagagaaagaaaagaagagtggattcagctggtgttggagttaagtctgccgagg 320 ||| |||||||||||||||||| | |||| |||||||||| ||| || | |||| Sbjct: 102955 -taacaagagaaagaaaagaagaactggttcaactggtgttgggactaattccgtagagg 103013 Query: 321 gtttctcagatgtaaaatcaaatgagaaagtccaaccgcagaggagaaaacttttcagaa 380 || |||||||| ||||| ||| |||||| |||||| | |||||||||||||||| | Sbjct: 103014 gtcgatcagatgtcaaatccaataagaaagcccaacctc---ggagaaaacttttcagga 103070 Query: 381 ttcctcctgaggcagttcaggta 403 ||||||||| ||||||| ||||| Sbjct: 103071 ttcctcctgcggcagttgaggta 103093
>dbj|AP005191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0479D12 Length = 148362 Score = 107 bits (54), Expect = 4e-20 Identities = 81/89 (91%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 4 tccaattgttcaggnaagtccgctttattctccaaacgatgatattccaggctttatatc 63 |||||||||||||| | |||| |||||||||||||| ||||||||||||| ||| ||||| Sbjct: 25992 tccaattgttcaggga-gtccactttattctccaaatgatgatattccagacttcatatc 26050 Query: 64 agcagatttcactgatgcggaaggattct 92 ||||||||||| |||||| |||||||||| Sbjct: 26051 agcagatttcaatgatgctgaaggattct 26079 Score = 83.8 bits (42), Expect = 6e-13 Identities = 165/203 (81%), Gaps = 6/203 (2%) Strand = Plus / Plus Query: 201 aaatgtttggaaagctgactgacaatgaaaagcagagtgaagatgaagattggggtacta 260 ||||||||||| ||| | || |||||| | |||||||||||||||||||||||| || Sbjct: 26336 aaatgtttggagagcctattggcaatgacgaacagagtgaagatgaagattggggt-ct- 26393 Query: 261 gtaataagagaaagaaaagaagagtggattcagctggtgttggagttaagtctgccgagg 320 ||| |||||||||||||||||| | |||| |||||||||| ||| || | |||| Sbjct: 26394 -taacaagagaaagaaaagaagaactggttcaactggtgttgggactaattccgtagagg 26452 Query: 321 gtttctcagatgtaaaatcaaatgagaaagtccaaccgcagaggagaaaacttttcagaa 380 || |||||||| ||||| ||| |||||| |||||| | |||||||||||||||| | Sbjct: 26453 gtcgatcagatgtcaaatccaataagaaagcccaacctc---ggagaaaacttttcagga 26509 Query: 381 ttcctcctgaggcagttcaggta 403 ||||||||| ||||||| ||||| Sbjct: 26510 ttcctcctgcggcagttgaggta 26532 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 489 agattgacaagtggttcaaaaatacaaggtgtgctgctctcagagatcggaaggc 543 ||||||| |||||||||||||||||| |||||||||||||||| ||| ||||||| Sbjct: 27107 agattgataagtggttcaaaaatacacggtgtgctgctctcagggataggaaggc 27161 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 414 cttttgctgaaagcgagcttccaacccgggaggtgaaagagaatctctcaacagaattgg 473 |||||||||||| |||||||| ||||| || ||||| |||||||||||||| ||| Sbjct: 26740 cttttgctgaaaatgagcttcctgcccggagtgtcaaagaaaatctctcaacagagctgg 26799 Query: 474 gtatttcatttgaaaag 490 ||||||| ||||||||| Sbjct: 26800 gtatttcttttgaaaag 26816
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 118 tgattctggggatgatgatgctgccg 143 ||||||||||||||||||| |||||| Sbjct: 2940384 tgattctggggatgatgatcctgccg 2940359
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 118 tgattctggggatgatgatgctgccg 143 ||||||||||||||||||| |||||| Sbjct: 67765 tgattctggggatgatgatcctgccg 67740
>gb|AC123547.15| Medicago truncatula clone mth2-26n6, complete sequence Length = 111995 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 235 gagtgaagatgaagattggggt 256 |||||||||||||||||||||| Sbjct: 61573 gagtgaagatgaagattggggt 61552
>emb|BX842643.1| Mycoplasma mycoides subsp. mycoides SC genomic DNA, complete sequence; segment 2/4 Length = 346939 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 agtaataagagaaagaaaagaa 281 |||||||||||||||||||||| Sbjct: 131527 agtaataagagaaagaaaagaa 131548
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 118 tgattctggggatgatgatgctgccg 143 ||||||||||||||||||| |||||| Sbjct: 3913367 tgattctggggatgatgatcctgccg 3913342
>emb|BX908770.13| Zebrafish DNA sequence from clone CH211-198A12 in linkage group 13, complete sequence Length = 126240 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 259 tagtaataagagaaagaaaagaagag 284 |||||||| ||||||||||||||||| Sbjct: 71282 tagtaataggagaaagaaaagaagag 71307
>emb|BX927129.10| Zebrafish DNA sequence from clone DKEY-158N21 in linkage group 13, complete sequence Length = 154491 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 259 tagtaataagagaaagaaaagaagag 284 |||||||| ||||||||||||||||| Sbjct: 20694 tagtaataggagaaagaaaagaagag 20719
>emb|BX928754.9| Zebrafish DNA sequence from clone DKEY-169I10 in linkage group 13, complete sequence Length = 263849 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 259 tagtaataagagaaagaaaagaagag 284 |||||||| ||||||||||||||||| Sbjct: 199277 tagtaataggagaaagaaaagaagag 199302
>gb|AC096759.3| Homo sapiens BAC clone RP11-567N4 from 4, complete sequence Length = 196363 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 159 aaaggccaaagaaagaggttga 180 |||||||||||||||||||||| Sbjct: 61935 aaaggccaaagaaagaggttga 61956
>gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 27343, complete genome Length = 1010023 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agtaataagagaaagaaaagaa 281 |||||||||||||||||||||| Sbjct: 657359 agtaataagagaaagaaaagaa 657338
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 118 tgattctggggatgatgatgctgccg 143 ||||||||||||||||||| |||||| Sbjct: 3615898 tgattctggggatgatgatcctgccg 3615873
>gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004P24, complete sequence Length = 137721 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 263 aataagagaaagaaaagaaga 283 ||||||||||||||||||||| Sbjct: 10336 aataagagaaagaaaagaaga 10316
>gb|AC102017.15| Mus musculus chromosome 5, clone RP24-571N6, complete sequence Length = 119681 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 gtaataagagaaagaaaagaa 281 ||||||||||||||||||||| Sbjct: 58900 gtaataagagaaagaaaagaa 58880
>emb|CT009693.5| Pig DNA sequence from clone PigE-201H15 on chromosome 7, complete sequence Length = 82411 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 155 taccaaaggccaaagaaagag 175 ||||||||||||||||||||| Sbjct: 39841 taccaaaggccaaagaaagag 39861
>gb|AC124728.5| Mus musculus BAC clone RP23-470C22 from chromosome 6, complete sequence Length = 183845 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 ataagagaaagaaaagaagag 284 ||||||||||||||||||||| Sbjct: 125736 ataagagaaagaaaagaagag 125716
>gb|AC125119.2| Mus musculus BAC clone RP24-266E24 from chromosome 6, complete sequence Length = 194445 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 366 gaaaacttttcagaattcctc 386 ||||||||||||||||||||| Sbjct: 15672 gaaaacttttcagaattcctc 15652
>emb|BX927368.13| Zebrafish DNA sequence from clone CH211-15J16 in linkage group 23, complete sequence Length = 176438 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 gaaatgtttggaaagctgact 220 ||||||||||||||||||||| Sbjct: 13539 gaaatgtttggaaagctgact 13559
>ref|XM_759142.1| Theileria parva strain Muguga chromosome 4 hypothetical protein (TP04_0600) partial mRNA Length = 2253 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 481 atttgaaaagattgacaagtg 501 ||||||||||||||||||||| Sbjct: 462 atttgaaaagattgacaagtg 482
>gb|AC009493.3| Homo sapiens BAC clone RP11-448A3 from 7, complete sequence Length = 86516 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 477 tttcatttgaaaagattgaca 497 ||||||||||||||||||||| Sbjct: 62064 tttcatttgaaaagattgaca 62084
>gb|AC000004.1| Genomic sequence from Human 17, complete sequence Length = 141878 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 154 ctaccaaaggccaaagaaaga 174 ||||||||||||||||||||| Sbjct: 120522 ctaccaaaggccaaagaaaga 120502
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 aataagagaaagaaaagaaga 283 ||||||||||||||||||||| Sbjct: 7806619 aataagagaaagaaaagaaga 7806639
>gb|AC093731.2| Homo sapiens BAC clone RP11-12L16 from 2, complete sequence Length = 190686 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 accaaaggccaaagaaagagg 176 ||||||||||||||||||||| Sbjct: 104466 accaaaggccaaagaaagagg 104446
>emb|BX296551.4| Zebrafish DNA sequence from clone CH211-224L10 in linkage group 23, complete sequence Length = 180447 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 gaaatgtttggaaagctgact 220 ||||||||||||||||||||| Sbjct: 86641 gaaatgtttggaaagctgact 86661
>gb|AC154008.1| Mus musculus 6 BAC RP24-470H20 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 139613 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 366 gaaaacttttcagaattcctc 386 ||||||||||||||||||||| Sbjct: 88129 gaaaacttttcagaattcctc 88109
>emb|AL121852.3|CNS01DST Human chromosome 14 DNA sequence BAC R-159L20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 167131 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 154 ctaccaaaggccaaagaaaga 174 ||||||||||||||||||||| Sbjct: 38757 ctaccaaaggccaaagaaaga 38737
>dbj|AP005671.2| Homo sapiens genomic DNA, chromosome 18 clone:CTD-3096M3, complete sequence Length = 86000 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 aaagcagagtgaagatgaaga 249 ||||||||||||||||||||| Sbjct: 18062 aaagcagagtgaagatgaaga 18082
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 aataagagaaagaaaagaaga 283 ||||||||||||||||||||| Sbjct: 7876706 aataagagaaagaaaagaaga 7876726
>emb|AL844177.15| Mouse DNA sequence from clone RP23-414O19 on chromosome 4, complete sequence Length = 144217 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 477 tttcatttgaaaagattgaca 497 ||||||||||||||||||||| Sbjct: 48085 tttcatttgaaaagattgaca 48065
>emb|CT009503.7| Pig DNA sequence from clone CH242-137E23 on chromosome 7, complete sequence Length = 222099 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 155 taccaaaggccaaagaaagag 175 ||||||||||||||||||||| Sbjct: 214145 taccaaaggccaaagaaagag 214165
>gb|AC166175.2| Mus musculus BAC clone RP23-53H1 from chromosome 9, complete sequence Length = 264591 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 aataagagaaagaaaagaaga 283 ||||||||||||||||||||| Sbjct: 215544 aataagagaaagaaaagaaga 215564
>dbj|AP004517.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT14B06, TM0045, complete sequence Length = 113139 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 gagtgaagatgaagattggggtact 259 ||||||||||||||| ||||||||| Sbjct: 570 gagtgaagatgaagactggggtact 546
>gb|DP000016.1| Pan troglodytes target 1 genomic scaffold Length = 1623484 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 ctagtaataagagaaagaaaagaa 281 |||| ||||||||||||||||||| Sbjct: 604233 ctagcaataagagaaagaaaagaa 604256
>gb|AC165380.3| Colobus guereza clone CH272-85C5, complete sequence Length = 199248 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 ctagtaataagagaaagaaaagaa 281 |||| ||||||||||||||||||| Sbjct: 50339 ctagcaataagagaaagaaaagaa 50362
>gb|AC079685.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0012A20, complete sequence Length = 131599 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 aagagaaagaaaagaagagt 285 |||||||||||||||||||| Sbjct: 37694 aagagaaagaaaagaagagt 37675
>gb|AC087264.3| Pan troglodytes clone RP43-150N19, complete sequence Length = 116671 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 ctagtaataagagaaagaaaagaa 281 |||| ||||||||||||||||||| Sbjct: 23926 ctagcaataagagaaagaaaagaa 23949
>gb|AC145494.3| Gorilla gorilla gorilla clone CH255-100P16, complete sequence Length = 187132 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 ctagtaataagagaaagaaaagaa 281 |||| ||||||||||||||||||| Sbjct: 34868 ctagcaataagagaaagaaaagaa 34891
>gb|AC146131.4| Pan troglodytes BAC clone RP43-4F15 from 7, complete sequence Length = 179576 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 tgaaaagcagagtgaagatg 245 |||||||||||||||||||| Sbjct: 41604 tgaaaagcagagtgaagatg 41585
>gb|AC084729.2| Papio anubis clone RP41-12N1, complete sequence Length = 208707 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 ctagtaataagagaaagaaaagaa 281 |||| ||||||||||||||||||| Sbjct: 156156 ctagcaataagagaaagaaaagaa 156179
>gb|AY422916.1| Uncultured proteobacterium clone CR27 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds Length = 492 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gatgatgatgctgccgagat 147 |||||||||||||||||||| Sbjct: 279 gatgatgatgctgccgagat 260
>gb|AC024730.7| Homo sapiens BAC clone RP11-422E4 from 7, complete sequence Length = 151198 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 tgaaaagcagagtgaagatg 245 |||||||||||||||||||| Sbjct: 77237 tgaaaagcagagtgaagatg 77218
>gb|AC129324.4| Mus musculus BAC clone RP23-253G24 from chromosome 18, complete sequence Length = 166990 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 taggaattgattctggggat 130 |||||||||||||||||||| Sbjct: 109492 taggaattgattctggggat 109473
>gb|AC100754.8| Homo sapiens chromosome 15, clone RP11-262I11, complete sequence Length = 118732 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 aggccaaagaaagaggttga 180 |||||||||||||||||||| Sbjct: 46883 aggccaaagaaagaggttga 46902
>gb|AC142342.1| Pan troglodytes BAC clone RP43-45D19 from 7, complete sequence Length = 171571 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 258 ctagtaataagagaaagaaaagaa 281 |||| ||||||||||||||||||| Sbjct: 32083 ctagcaataagagaaagaaaagaa 32060
>emb|AL590683.16| Human DNA sequence from clone RP11-10N16 on chromosome 1 Contains the 5' end of the IL22RA1 gene for interleukin 22 receptor alpha 1, the IL28RA gene for interleukin 28 receptor alpha (interferon, lambda receptor), a novel gene and the 3' end of a novel gene, complete sequence Length = 164684 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 459 tctcaacagaattgggtatt 478 |||||||||||||||||||| Sbjct: 142393 tctcaacagaattgggtatt 142374
>emb|AL450244.11| Human DNA sequence from clone RP11-152M20 on chromosome 1, complete sequence Length = 85101 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 191 cttaatgaggaaatgtttggaaag 214 ||||||||| |||||||||||||| Sbjct: 80988 cttaatgagtaaatgtttggaaag 81011
>emb|AL356118.15| Human DNA sequence from clone RP11-487A2 on chromosome 13, complete sequence Length = 166245 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 aggccaaagaaagaggttga 180 |||||||||||||||||||| Sbjct: 98902 aggccaaagaaagaggttga 98883
>emb|AL354864.16| Human DNA sequence from clone RP11-435D7 on chromosome 1 Contains the 5' end of the PSMB2 gene for proteasome (prosome, macropain) subunit, beta type, 2, a novel transcript (FLJ38984), a putative novel transcript, the CLSPN gene for claspin homolog (Xenopus laevis) and the 5' end of the EIF2C4 gene for eukaryotic translation initiation factor 2C, 4, complete sequence Length = 194296 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gggaggtgaaagagaatctc 460 |||||||||||||||||||| Sbjct: 147399 gggaggtgaaagagaatctc 147418
>emb|AL354857.13| Human DNA sequence from clone RP11-346N8 on chromosome 6 Contains the 3' end of the EPHA7 gene for ephrin receptor A7, complete sequence Length = 199223 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 265 taagagaaagaaaagaagagtgga 288 |||||||||||||| ||||||||| Sbjct: 16604 taagagaaagaaaacaagagtgga 16581
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 aagagaaagaaaagaagagt 285 |||||||||||||||||||| Sbjct: 756837 aagagaaagaaaagaagagt 756818
>gb|AC007998.10| Homo sapiens chromosome 18, clone RP11-322E11, complete sequence Length = 207799 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 attataaaagacttaatgag 199 |||||||||||||||||||| Sbjct: 97865 attataaaagacttaatgag 97846
>gb|AC157019.8| Mus musculus 10 BAC RP24-377N13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 233155 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 ctggggatgatgatgctgcc 142 |||||||||||||||||||| Sbjct: 116797 ctggggatgatgatgctgcc 116778
>emb|CR925699.6| Zebrafish DNA sequence from clone RP71-18J1 in linkage group 4, complete sequence Length = 150030 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 aaagacttaatgaggaaatg 205 |||||||||||||||||||| Sbjct: 79121 aaagacttaatgaggaaatg 79140 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 aaagacttaatgaggaaatg 205 |||||||||||||||||||| Sbjct: 73573 aaagacttaatgaggaaatg 73554 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 aaagacttaatgaggaaatg 205 |||||||||||||||||||| Sbjct: 59774 aaagacttaatgaggaaatg 59755 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 aaagacttaatgaggaaatg 205 |||||||||||||||||||| Sbjct: 34343 aaagacttaatgaggaaatg 34362 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 aaagacttaatgaggaaatg 205 |||||||||||||||||||| Sbjct: 29659 aaagacttaatgaggaaatg 29678 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 aaagacttaatgaggaaatg 205 |||||||||||||||||||| Sbjct: 24153 aaagacttaatgaggaaatg 24134
>gb|AC067750.5| Homo sapiens chromosome 10 clone RP11-359E3, complete sequence Length = 203205 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 aatgaaaagcagagtgaaga 243 |||||||||||||||||||| Sbjct: 85141 aatgaaaagcagagtgaaga 85160
>gb|AC110611.3| Homo sapiens BAC clone RP11-345F18 from 4, complete sequence Length = 195155 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 aggccaaagaaagaggttga 180 |||||||||||||||||||| Sbjct: 4795 aggccaaagaaagaggttga 4776
>gb|AC099568.3| Homo sapiens chromosome 1 clone RP5-943J3, complete sequence Length = 116470 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 aggccaaagaaagaggttga 180 |||||||||||||||||||| Sbjct: 21118 aggccaaagaaagaggttga 21099
>gb|AC093423.2| Homo sapiens chromosome 1 clone RP11-413E1, complete sequence Length = 185182 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 aggccaaagaaagaggttga 180 |||||||||||||||||||| Sbjct: 133170 aggccaaagaaagaggttga 133151
>gb|DP000005.1| Macaca mulatta target 1 genomic scaffold Length = 1678549 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 ctagtaataagagaaagaaaagaa 281 |||| ||||||||||||||||||| Sbjct: 531489 ctagcaataagagaaagaaaagaa 531512
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 aagagaaagaaaagaagagt 285 |||||||||||||||||||| Sbjct: 756837 aagagaaagaaaagaagagt 756818
>gb|AC007218.6| Homo sapiens chromosome 16 clone RP11-297M9, complete sequence Length = 193220 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 tgattctggggatgatgatg 137 |||||||||||||||||||| Sbjct: 22400 tgattctggggatgatgatg 22419
>gb|DP000025.1| Gorilla gorilla gorilla target 1 genomic scaffold Length = 1787293 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 ctagtaataagagaaagaaaagaa 281 |||| ||||||||||||||||||| Sbjct: 519305 ctagcaataagagaaagaaaagaa 519328
>gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold Length = 1825024 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 ctagtaataagagaaagaaaagaa 281 |||| ||||||||||||||||||| Sbjct: 554837 ctagcaataagagaaagaaaagaa 554860
>gb|DP000026.1| Pongo pygmaeus target 1 genomic scaffold Length = 1819346 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 ctagtaataagagaaagaaaagaa 281 |||| ||||||||||||||||||| Sbjct: 486320 ctagcaataagagaaagaaaagaa 486343
>gb|AC091983.3| Homo sapiens chromosome 5 clone RP11-559F22, complete sequence Length = 110999 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 attcaaatttaggaattgat 121 |||||||||||||||||||| Sbjct: 15942 attcaaatttaggaattgat 15961
>gb|AC124039.3| Macaca mulatta clone CH250-191K8, complete sequence Length = 174570 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 ctagtaataagagaaagaaaagaa 281 |||| ||||||||||||||||||| Sbjct: 133768 ctagcaataagagaaagaaaagaa 133791
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 tggggatgatgatgctgccg 143 |||||||||||||||||||| Sbjct: 1249582 tggggatgatgatgctgccg 1249601
>dbj|BS000115.1| Pan troglodytes chromosome 22 clone:PTB-047E23, map 22, complete sequences Length = 150496 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 aaaagcagagtgaagatgaa 247 |||||||||||||||||||| Sbjct: 98325 aaaagcagagtgaagatgaa 98306
>gb|AC007221.2|AC007221 Homo sapiens chromosome 16 clone RPCI-11_418I22, complete sequence Length = 230696 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 tgattctggggatgatgatg 137 |||||||||||||||||||| Sbjct: 225165 tgattctggggatgatgatg 225184
>gb|AC002080.1|AC002080 Human BAC clone CTA-253B13 from 7q31-q32, complete sequence Length = 171905 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 ctagtaataagagaaagaaaagaa 281 |||| ||||||||||||||||||| Sbjct: 150272 ctagcaataagagaaagaaaagaa 150295
>gb|AC007934.7|AC007934 Homo sapiens, clone RP11-29A1, complete sequence Length = 157625 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 aagagaaagaaaagaagagt 285 |||||||||||||||||||| Sbjct: 5654 aagagaaagaaaagaagagt 5673
>gb|AC144364.3| Didelphis virginiana clone LB3-157N2, complete sequence Length = 140935 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 tagtaataagagaaagaaaa 278 |||||||||||||||||||| Sbjct: 108754 tagtaataagagaaagaaaa 108735
>emb|AL805977.2| Human DNA sequence from clone RP11-491O20 on chromosome 6, complete sequence Length = 174830 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 tgaaaagcagagtgaagatg 245 |||||||||||||||||||| Sbjct: 159711 tgaaaagcagagtgaagatg 159730
>emb|Z77663.3|CEF53F4 Caenorhabditis elegans Cosmid F53F4, complete sequence Length = 44426 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 tatttcatttgaaaagattg 494 |||||||||||||||||||| Sbjct: 19902 tatttcatttgaaaagattg 19883
>emb|BX899181.10| Zebrafish DNA sequence from clone DKEY-115F9 in linkage group 4, complete sequence Length = 24677 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 aaagacttaatgaggaaatg 205 |||||||||||||||||||| Sbjct: 24476 aaagacttaatgaggaaatg 24457 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 aaagacttaatgaggaaatg 205 |||||||||||||||||||| Sbjct: 11734 aaagacttaatgaggaaatg 11715
>emb|CR383662.9| Zebrafish DNA sequence from clone DKEY-207J16 in linkage group 4, complete sequence Length = 174773 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 aaagacttaatgaggaaatg 205 |||||||||||||||||||| Sbjct: 80549 aaagacttaatgaggaaatg 80568 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 aaagacttaatgaggaaatg 205 |||||||||||||||||||| Sbjct: 57506 aaagacttaatgaggaaatg 57525 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 aaagacttaatgaggaaatg 205 |||||||||||||||||||| Sbjct: 43638 aaagacttaatgaggaaatg 43657 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 aaagacttaatgaggaaatg 205 |||||||||||||||||||| Sbjct: 37936 aaagacttaatgaggaaatg 37917
>emb|BX649408.3| Zebrafish DNA sequence from clone DKEYP-18C4 in linkage group 4, complete sequence Length = 96612 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 aaagacttaatgaggaaatg 205 |||||||||||||||||||| Sbjct: 2602 aaagacttaatgaggaaatg 2583
>emb|BX465862.7| Zebrafish DNA sequence from clone DKEY-146N1 in linkage group 4, complete sequence Length = 214562 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 aaagacttaatgaggaaatg 205 |||||||||||||||||||| Sbjct: 1799 aaagacttaatgaggaaatg 1780
>emb|BX537305.32| Zebrafish DNA sequence from clone DKEY-45L12, complete sequence Length = 186856 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 ttgggtatttcatttgaaaa 489 |||||||||||||||||||| Sbjct: 17422 ttgggtatttcatttgaaaa 17441
>dbj|AP001726.1| Homo sapiens genomic DNA, chromosome 21q, section 70/105 Length = 340000 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 aaaagcagagtgaagatgaa 247 |||||||||||||||||||| Sbjct: 169570 aaaagcagagtgaagatgaa 169551
>emb|CR376750.10| Zebrafish DNA sequence from clone DKEY-92I15 in linkage group 16, complete sequence Length = 143647 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 gaggtgaaagagaatctctc 462 |||||||||||||||||||| Sbjct: 96016 gaggtgaaagagaatctctc 96035
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 aagagaaagaaaagaagagt 285 |||||||||||||||||||| Sbjct: 756834 aagagaaagaaaagaagagt 756815
>gb|AF032096.1|AF032096 Trypanosoma congolense glucose transporter (TcoHT1) gene, complete cds Length = 2703 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 gccaaagaaagaggttgatt 182 |||||||||||||||||||| Sbjct: 2019 gccaaagaaagaggttgatt 2000
>emb|AL805957.12| Mouse DNA sequence from clone RP23-259P7 on chromosome 4, complete sequence Length = 197911 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 taaaagacttaatgaggaaa 203 |||||||||||||||||||| Sbjct: 9653 taaaagacttaatgaggaaa 9672
>dbj|BA000009.3| Beta vulgaris subsp. vulgaris mitochondrial genomic DNA, complete sequence Length = 368801 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 tactagtaataagagaaagaaaag 279 |||||||| ||||||||||||||| Sbjct: 298814 tactagtagtaagagaaagaaaag 298837
>dbj|BA000024.1| Beta vulgaris subsp. vulgaris mitochondrial genomic DNA, complete sequence Length = 501020 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 tactagtaataagagaaagaaaag 279 |||||||| ||||||||||||||| Sbjct: 369346 tactagtagtaagagaaagaaaag 369369
>gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold Length = 1751794 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 tagtaataagagaaagaaaa 278 |||||||||||||||||||| Sbjct: 108754 tagtaataagagaaagaaaa 108735
>gb|AC138724.3| Cercopithecus aethiops clone CH252-200P12, complete sequence Length = 173770 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 ctagtaataagagaaagaaaagaa 281 |||| ||||||||||||||||||| Sbjct: 27704 ctagcaataagagaaagaaaagaa 27727
>gb|AC073446.16| Homo sapiens chromosome 15, clone RP11-757E13, complete sequence Length = 185123 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 aggccaaagaaagaggttga 180 |||||||||||||||||||| Sbjct: 164671 aggccaaagaaagaggttga 164690
>dbj|AP000696.1| Homo sapiens genomic DNA, chromosome 21q22.2, BAC clone:KB1572B10, CBR1-HLCS region Length = 163752 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 aaaagcagagtgaagatgaa 247 |||||||||||||||||||| Sbjct: 106799 aaaagcagagtgaagatgaa 106780 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,556,659 Number of Sequences: 3902068 Number of extensions: 7556659 Number of successful extensions: 164930 Number of sequences better than 10.0: 98 Number of HSP's better than 10.0 without gapping: 98 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 164192 Number of HSP's gapped (non-prelim): 719 length of query: 577 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 554 effective length of database: 17,143,297,704 effective search space: 9497386928016 effective search space used: 9497386928016 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)