Clone Name | bags9m19 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK101024.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150D19, full insert sequence Length = 2454 Score = 698 bits (352), Expect = 0.0 Identities = 502/552 (90%) Strand = Plus / Plus Query: 9 gttgctcgttttgctagaggttacggtcctgaagaggtcgaagatctccatgagggggct 68 |||||||| | ||| ||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 1453 gttgctcgctatgccagaggttttggtcctgaagaggtgcaagatctccatgagggggct 1512 Query: 69 agtcttgttgaagtggtcaagaaagtgaggcctcatgttcttttaggactatctggagtt 128 ||||||||||||||||||| |||||||| ||||||||| ||||||||||| ||||||||| Sbjct: 1513 agtcttgttgaagtggtcaggaaagtgaagcctcatgtgcttttaggactttctggagtt 1572 Query: 129 ggcgggatatttaacgaggaggttctcaaggctatgaaagaatccgactccccctgccct 188 || || |||||||| |||||||||||||||||||||||||||||||| ||||| | ||| Sbjct: 1573 gggggcatatttaatgaggaggttctcaaggctatgaaagaatccgattcccctcgtcct 1632 Query: 189 gcaatttttgcaatgtccaacccaacaactaaagctgaatgtacgcctgaagatgtattc 248 |||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 1633 gcaatttttgcaatgtccaacccaactactaaagccgaatgtactcctgaagatgtattc 1692 Query: 249 aagcatgttggtgaaaatgcagtatttgctagtggaagccctttcagtaatgttacttta 308 || ||||||| || |||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 1693 aaatatgttggagacaatgcagtatttgccagtggaagccctttcagtaatgtcacttta 1752 Query: 309 agcaatggtagaaaaggctatgctaatcaagcaaacaacatgtatctgtttcctgggatt 368 ||||||||||| |||| || ||||||||||||||||| ||||||||||||||||| || Sbjct: 1753 ggcaatggtagacaagggtacgctaatcaagcaaacaatatgtatctgtttcctggtatc 1812 Query: 369 ggtttaggagcccttctttcaggtgctcggcatatatcggatggcatgctacatgctgca 428 ||||||||||||||||||||||||||||||||||| | ||||||||||| || | ||| Sbjct: 1813 ggtttaggagcccttctttcaggtgctcggcatattacagatggcatgctccaatcagca 1872 Query: 429 gctgagtgccttgcttcatacatcacagatgatgcaattcgaaaaggaatcctctttcct 488 |||||||||||||| |||||||||||||| |||| |||||||||||| ||||||||||| Sbjct: 1873 gctgagtgccttgcgtcatacatcacagacgatgaaattcgaaaaggcatcctctttcca 1932 Query: 489 tcaatttcaagtatcaggcacatcaccgcacgtgtcggcgctgcagtcgcccgtgctgct 548 ||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||| ||| Sbjct: 1933 tcaatctcaagtatcaggcacatcaccgcacgtgtcggcgccgcagtcgtccgtgccgct 1992 Query: 549 gttgatgaagat 560 |||||||||||| Sbjct: 1993 gttgatgaagat 2004
>dbj|AK070828.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065M02, full insert sequence Length = 2357 Score = 690 bits (348), Expect = 0.0 Identities = 501/552 (90%) Strand = Plus / Plus Query: 9 gttgctcgttttgctagaggttacggtcctgaagaggtcgaagatctccatgagggggct 68 |||||||| | ||| ||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 1372 gttgctcgctatgccagaggttttggtcctgaagaggtgcaagatctccatgagggggct 1431 Query: 69 agtcttgttgaagtggtcaagaaagtgaggcctcatgttcttttaggactatctggagtt 128 ||||||||||||||||||| |||||||| ||||||||| ||||||||||| ||||||||| Sbjct: 1432 agtcttgttgaagtggtcaggaaagtgaagcctcatgtgcttttaggactttctggagtt 1491 Query: 129 ggcgggatatttaacgaggaggttctcaaggctatgaaagaatccgactccccctgccct 188 || || |||||||| |||||||||||||||||||||||||||||||| ||||| | ||| Sbjct: 1492 gggggcatatttaatgaggaggttctcaaggctatgaaagaatccgattcccctcgtcct 1551 Query: 189 gcaatttttgcaatgtccaacccaacaactaaagctgaatgtacgcctgaagatgtattc 248 |||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 1552 gcaatttttgcaatgtccaacccaactactaaagccgaatgtactcctgaagatgtattc 1611 Query: 249 aagcatgttggtgaaaatgcagtatttgctagtggaagccctttcagtaatgttacttta 308 || ||||||| || |||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 1612 aaatatgttggagacaatgcagtatttgccagtggaagccctttcagtaatgtcacttta 1671 Query: 309 agcaatggtagaaaaggctatgctaatcaagcaaacaacatgtatctgtttcctgggatt 368 ||||||||||| |||| || ||||||||||||||||| ||||||||||||||||| || Sbjct: 1672 ggcaatggtagacaagggtacgctaatcaagcaaacaatatgtatctgtttcctggtatc 1731 Query: 369 ggtttaggagcccttctttcaggtgctcggcatatatcggatggcatgctacatgctgca 428 ||||||||||||||||||||||||||||||||||| | ||||||||||| || | ||| Sbjct: 1732 ggtttaggagcccttctttcaggtgctcggcatattacagatggcatgctccaatcagca 1791 Query: 429 gctgagtgccttgcttcatacatcacagatgatgcaattcgaaaaggaatcctctttcct 488 |||||||||||||| |||||||||||||| |||| |||||||||||| ||||||||||| Sbjct: 1792 gctgagtgccttgcgtcatacatcacagacgatgaaattcgaaaaggcatcctctttcca 1851 Query: 489 tcaatttcaagtatcaggcacatcaccgcacgtgtcggcgctgcagtcgcccgtgctgct 548 ||||| ||||||||| ||||||||||||||||||||||||| ||||||| |||||| ||| Sbjct: 1852 tcaatctcaagtatcgggcacatcaccgcacgtgtcggcgccgcagtcgtccgtgccgct 1911 Query: 549 gttgatgaagat 560 |||||||||||| Sbjct: 1912 gttgatgaagat 1923
>ref|NM_197228.1| Oryza sativa (japonica cultivar-group) putative mitochondrial NAD+-dependent malic enzyme protein (OSJNBb0073N24.24), mRNA Length = 1766 Score = 523 bits (264), Expect = e-145 Identities = 387/428 (90%) Strand = Plus / Plus Query: 9 gttgctcgttttgctagaggttacggtcctgaagaggtcgaagatctccatgagggggct 68 |||||||| | ||| ||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 1132 gttgctcgctatgccagaggttttggtcctgaagaggtgcaagatctccatgagggggct 1191 Query: 69 agtcttgttgaagtggtcaagaaagtgaggcctcatgttcttttaggactatctggagtt 128 ||||||||||||||||||| |||||||| ||||||||| ||||||||||| ||||||||| Sbjct: 1192 agtcttgttgaagtggtcaggaaagtgaagcctcatgtgcttttaggactttctggagtt 1251 Query: 129 ggcgggatatttaacgaggaggttctcaaggctatgaaagaatccgactccccctgccct 188 || || |||||||| |||||||||||||||||||||||||||||||| ||||| | ||| Sbjct: 1252 gggggcatatttaatgaggaggttctcaaggctatgaaagaatccgattcccctcgtcct 1311 Query: 189 gcaatttttgcaatgtccaacccaacaactaaagctgaatgtacgcctgaagatgtattc 248 |||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 1312 gcaatttttgcaatgtccaacccaactactaaagccgaatgtactcctgaagatgtattc 1371 Query: 249 aagcatgttggtgaaaatgcagtatttgctagtggaagccctttcagtaatgttacttta 308 || ||||||| || |||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 1372 aaatatgttggagacaatgcagtatttgccagtggaagccctttcagtaatgtcacttta 1431 Query: 309 agcaatggtagaaaaggctatgctaatcaagcaaacaacatgtatctgtttcctgggatt 368 ||||||||||| |||| || ||||||||||||||||| ||||||||||||||||| || Sbjct: 1432 ggcaatggtagacaagggtacgctaatcaagcaaacaatatgtatctgtttcctggtatc 1491 Query: 369 ggtttaggagcccttctttcaggtgctcggcatatatcggatggcatgctacatgctgca 428 ||||||||||||||||||||||||||||||||||| | ||||||||||| || | ||| Sbjct: 1492 ggtttaggagcccttctttcaggtgctcggcatattacagatggcatgctccaatcagca 1551 Query: 429 gctgagtg 436 |||||||| Sbjct: 1552 gctgagtg 1559
>dbj|AK058254.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-C11, full insert sequence Length = 769 Score = 474 bits (239), Expect = e-130 Identities = 335/367 (91%) Strand = Plus / Plus Query: 194 ttttgcaatgtccaacccaacaactaaagctgaatgtacgcctgaagatgtattcaagca 253 ||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||| | Sbjct: 3 ttttgcaatgtccaacccaactactaaagccgaatgtactcctgaagatgtattcaaata 62 Query: 254 tgttggtgaaaatgcagtatttgctagtggaagccctttcagtaatgttactttaagcaa 313 |||||| || |||||||||||||| ||||||||||||||||||||||| |||||| |||| Sbjct: 63 tgttggagacaatgcagtatttgccagtggaagccctttcagtaatgtcactttaggcaa 122 Query: 314 tggtagaaaaggctatgctaatcaagcaaacaacatgtatctgtttcctgggattggttt 373 ||||||| |||| || ||||||||||||||||| ||||||||||||||||| || ||||| Sbjct: 123 tggtagacaagggtacgctaatcaagcaaacaatatgtatctgtttcctggtatcggttt 182 Query: 374 aggagcccttctttcaggtgctcggcatatatcggatggcatgctacatgctgcagctga 433 |||||||||||||||||||||||||||||| | ||||||||||| || | |||||||| Sbjct: 183 aggagcccttctttcaggtgctcggcatattacagatggcatgctccaatcagcagctga 242 Query: 434 gtgccttgcttcatacatcacagatgatgcaattcgaaaaggaatcctctttccttcaat 493 ||||||||| |||||||||||||| |||| |||||||||||| ||||||||||| ||||| Sbjct: 243 gtgccttgcgtcatacatcacagacgatgaaattcgaaaaggcatcctctttccatcaat 302 Query: 494 ttcaagtatcaggcacatcaccgcacgtgtcggcgctgcagtcgcccgtgctgctgttga 553 ||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||| Sbjct: 303 ctcaagtatcaggcacatcaccgcacgtgtcggcgccgcagtcgtccgtgccgctgttga 362 Query: 554 tgaagat 560 ||||||| Sbjct: 363 tgaagat 369
>gb|AY105653.1| Zea mays PCO079171 mRNA sequence Length = 862 Score = 359 bits (181), Expect = 6e-96 Identities = 313/357 (87%) Strand = Plus / Plus Query: 203 gtccaacccaacaactaaagctgaatgtacgcctgaagatgtattcaagcatgttggtga 262 ||||||||| || |||||||||||||| || || || |||||||||||||||||||| || Sbjct: 12 gtccaaccctactactaaagctgaatgcactcccgatgatgtattcaagcatgttggaga 71 Query: 263 aaatgcagtatttgctagtggaagccctttcagtaatgttactttaagcaatggtagaaa 322 || || |||||||||||||||||||||| ||||||||| ||||| | ||||||| | Sbjct: 72 taaagcgatatttgctagtggaagcccttttagtaatgtttctttaggaaatggtaaatc 131 Query: 323 aggctatgctaatcaagcaaacaacatgtatctgtttcctgggattggtttaggagccct 382 || ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 132 tggttatgctaatcaagcaaacaacatgtatctatttcctgggattggtttaggtgccct 191 Query: 383 tctttcaggtgctcggcatatatcggatggcatgctacatgctgcagctgagtgccttgc 442 |||||||||||| |||||| | || ||||||||||| || || |||||||||||||| || Sbjct: 192 tctttcaggtgcccggcatgtttcagatggcatgcttcaagcagcagctgagtgcctggc 251 Query: 443 ttcatacatcacagatgatgcaattcgaaaaggaatcctctttccttcaatttcaagtat 502 |||||||||||||| || | ||||||||||||||||||||| ||||| | || ||||| Sbjct: 252 atcatacatcacagacgacgaaattcgaaaaggaatcctcttcccttcggtctccagtat 311 Query: 503 caggcacatcaccgcacgtgtcggcgctgcagtcgcccgtgctgctgttgatgaaga 559 |||||||||||||||||||||||||| ||||||| |||||| ||||||| |||||| Sbjct: 312 taggcacatcaccgcacgtgtcggcgcagcagtcgtccgtgccgctgttgctgaaga 368
>gb|AC084023.8| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0062C05 map S21174S, complete sequence Length = 178867 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 225 gaatgtacgcctgaagatgtattcaagcatgttggtgaaaatgcagtatttgctagtgga 284 |||||||| ||||||||||||||||| ||||||| || |||||||||||||| |||||| Sbjct: 1111 gaatgtactcctgaagatgtattcaaatatgttggagacaatgcagtatttgccagtgga 1170 Query: 285 agccctttcagtaatgttacttta 308 ||||||||||||||||| |||||| Sbjct: 1171 agccctttcagtaatgtcacttta 1194 Score = 109 bits (55), Expect = 1e-20 Identities = 70/75 (93%) Strand = Plus / Plus Query: 148 aggttctcaaggctatgaaagaatccgactccccctgccctgcaatttttgcaatgtcca 207 |||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||| Sbjct: 954 aggttctcaaggctatgaaagaatccgattcccctcgtcctgcaatttttgcaatgtcca 1013 Query: 208 acccaacaactaaag 222 ||||||| ||||||| Sbjct: 1014 acccaactactaaag 1028 Score = 101 bits (51), Expect = 2e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 498 agtatcaggcacatcaccgcacgtgtcggcgctgcagtcgcccgtgctgctgttgatgaa 557 |||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||| Sbjct: 2058 agtatcaggcacatcaccgcacgtgtcggcgccgcagtcgtccgtgccgctgttgatgaa 2117 Query: 558 gat 560 ||| Sbjct: 2118 gat 2120 Score = 97.6 bits (49), Expect = 4e-17 Identities = 70/77 (90%) Strand = Plus / Plus Query: 9 gttgctcgttttgctagaggttacggtcctgaagaggtcgaagatctccatgagggggct 68 |||||||| | ||| ||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 116 gttgctcgctatgccagaggttttggtcctgaagaggtgcaagatctccatgagggggct 175 Query: 69 agtcttgttgaagtggt 85 ||||||||||||||||| Sbjct: 176 agtcttgttgaagtggt 192 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 83 ggtcaagaaagtgaggcctcatgttcttttaggactatctggagttggcgggatatttaa 142 ||||| |||||||| ||||||||| ||||||||||| ||||||||||| || |||||||| Sbjct: 320 ggtcaggaaagtgaagcctcatgtgcttttaggactttctggagttgggggcatatttaa 379 Query: 143 cgaggaggt 151 |||||||| Sbjct: 380 tgaggaggt 388 Score = 79.8 bits (40), Expect = 9e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 436 gccttgcttcatacatcacagatgatgcaattcgaaaaggaatcctctttccttcaattt 495 ||||||| |||||||||||||| |||| |||||||||||| ||||||||||| ||||| | Sbjct: 1889 gccttgcgtcatacatcacagacgatgaaattcgaaaaggcatcctctttccatcaatct 1948 Query: 496 caag 499 |||| Sbjct: 1949 caag 1952 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 369 ggtttaggagcccttctttcaggtgctcggcatatatcggatggcatgctacatgctgca 428 ||||||||||||||||||||||||||||||||||| | ||||||||||| || | ||| Sbjct: 1431 ggtttaggagcccttctttcaggtgctcggcatattacagatggcatgctccaatcagca 1490 Query: 429 gctgagtg 436 |||||||| Sbjct: 1491 gctgagtg 1498 Score = 79.8 bits (40), Expect = 9e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 310 gcaatggtagaaaaggctatgctaatcaagcaaacaacatgtatctgtttcctggg 365 ||||||||||| |||| || ||||||||||||||||| |||||||||||||||||| Sbjct: 1283 gcaatggtagacaagggtacgctaatcaagcaaacaatatgtatctgtttcctggg 1338
>gb|AC078840.6| Oryza sativa chromosome 10 BAC OSJNBb0073N24 genomic sequence, complete sequence Length = 130058 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 225 gaatgtacgcctgaagatgtattcaagcatgttggtgaaaatgcagtatttgctagtgga 284 |||||||| ||||||||||||||||| ||||||| || |||||||||||||| |||||| Sbjct: 66969 gaatgtactcctgaagatgtattcaaatatgttggagacaatgcagtatttgccagtgga 67028 Query: 285 agccctttcagtaatgttacttta 308 ||||||||||||||||| |||||| Sbjct: 67029 agccctttcagtaatgtcacttta 67052 Score = 109 bits (55), Expect = 1e-20 Identities = 70/75 (93%) Strand = Plus / Plus Query: 148 aggttctcaaggctatgaaagaatccgactccccctgccctgcaatttttgcaatgtcca 207 |||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||| Sbjct: 66812 aggttctcaaggctatgaaagaatccgattcccctcgtcctgcaatttttgcaatgtcca 66871 Query: 208 acccaacaactaaag 222 ||||||| ||||||| Sbjct: 66872 acccaactactaaag 66886 Score = 101 bits (51), Expect = 2e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 498 agtatcaggcacatcaccgcacgtgtcggcgctgcagtcgcccgtgctgctgttgatgaa 557 |||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||| Sbjct: 67916 agtatcaggcacatcaccgcacgtgtcggcgccgcagtcgtccgtgccgctgttgatgaa 67975 Query: 558 gat 560 ||| Sbjct: 67976 gat 67978 Score = 97.6 bits (49), Expect = 4e-17 Identities = 70/77 (90%) Strand = Plus / Plus Query: 9 gttgctcgttttgctagaggttacggtcctgaagaggtcgaagatctccatgagggggct 68 |||||||| | ||| ||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 65974 gttgctcgctatgccagaggttttggtcctgaagaggtgcaagatctccatgagggggct 66033 Query: 69 agtcttgttgaagtggt 85 ||||||||||||||||| Sbjct: 66034 agtcttgttgaagtggt 66050 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 83 ggtcaagaaagtgaggcctcatgttcttttaggactatctggagttggcgggatatttaa 142 ||||| |||||||| ||||||||| ||||||||||| ||||||||||| || |||||||| Sbjct: 66178 ggtcaggaaagtgaagcctcatgtgcttttaggactttctggagttgggggcatatttaa 66237 Query: 143 cgaggaggt 151 |||||||| Sbjct: 66238 tgaggaggt 66246 Score = 79.8 bits (40), Expect = 9e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 436 gccttgcttcatacatcacagatgatgcaattcgaaaaggaatcctctttccttcaattt 495 ||||||| |||||||||||||| |||| |||||||||||| ||||||||||| ||||| | Sbjct: 67747 gccttgcgtcatacatcacagacgatgaaattcgaaaaggcatcctctttccatcaatct 67806 Query: 496 caag 499 |||| Sbjct: 67807 caag 67810 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 369 ggtttaggagcccttctttcaggtgctcggcatatatcggatggcatgctacatgctgca 428 ||||||||||||||||||||||||||||||||||| | ||||||||||| || | ||| Sbjct: 67289 ggtttaggagcccttctttcaggtgctcggcatattacagatggcatgctccaatcagca 67348 Query: 429 gctgagtg 436 |||||||| Sbjct: 67349 gctgagtg 67356 Score = 79.8 bits (40), Expect = 9e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 310 gcaatggtagaaaaggctatgctaatcaagcaaacaacatgtatctgtttcctggg 365 ||||||||||| |||| || ||||||||||||||||| |||||||||||||||||| Sbjct: 67141 gcaatggtagacaagggtacgctaatcaagcaaacaatatgtatctgtttcctggg 67196
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 225 gaatgtacgcctgaagatgtattcaagcatgttggtgaaaatgcagtatttgctagtgga 284 |||||||| ||||||||||||||||| ||||||| || |||||||||||||| |||||| Sbjct: 18705691 gaatgtactcctgaagatgtattcaaatatgttggagacaatgcagtatttgccagtgga 18705750 Query: 285 agccctttcagtaatgttacttta 308 ||||||||||||||||| |||||| Sbjct: 18705751 agccctttcagtaatgtcacttta 18705774 Score = 109 bits (55), Expect = 1e-20 Identities = 70/75 (93%) Strand = Plus / Plus Query: 148 aggttctcaaggctatgaaagaatccgactccccctgccctgcaatttttgcaatgtcca 207 |||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||| Sbjct: 18705534 aggttctcaaggctatgaaagaatccgattcccctcgtcctgcaatttttgcaatgtcca 18705593 Query: 208 acccaacaactaaag 222 ||||||| ||||||| Sbjct: 18705594 acccaactactaaag 18705608 Score = 101 bits (51), Expect = 2e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 498 agtatcaggcacatcaccgcacgtgtcggcgctgcagtcgcccgtgctgctgttgatgaa 557 |||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||| Sbjct: 18706638 agtatcaggcacatcaccgcacgtgtcggcgccgcagtcgtccgtgccgctgttgatgaa 18706697 Query: 558 gat 560 ||| Sbjct: 18706698 gat 18706700 Score = 97.6 bits (49), Expect = 4e-17 Identities = 70/77 (90%) Strand = Plus / Plus Query: 9 gttgctcgttttgctagaggttacggtcctgaagaggtcgaagatctccatgagggggct 68 |||||||| | ||| ||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 18704696 gttgctcgctatgccagaggttttggtcctgaagaggtgcaagatctccatgagggggct 18704755 Query: 69 agtcttgttgaagtggt 85 ||||||||||||||||| Sbjct: 18704756 agtcttgttgaagtggt 18704772 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 83 ggtcaagaaagtgaggcctcatgttcttttaggactatctggagttggcgggatatttaa 142 ||||| |||||||| ||||||||| ||||||||||| ||||||||||| || |||||||| Sbjct: 18704900 ggtcaggaaagtgaagcctcatgtgcttttaggactttctggagttgggggcatatttaa 18704959 Query: 143 cgaggaggt 151 |||||||| Sbjct: 18704960 tgaggaggt 18704968 Score = 79.8 bits (40), Expect = 9e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 436 gccttgcttcatacatcacagatgatgcaattcgaaaaggaatcctctttccttcaattt 495 ||||||| |||||||||||||| |||| |||||||||||| ||||||||||| ||||| | Sbjct: 18706469 gccttgcgtcatacatcacagacgatgaaattcgaaaaggcatcctctttccatcaatct 18706528 Query: 496 caag 499 |||| Sbjct: 18706529 caag 18706532 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 369 ggtttaggagcccttctttcaggtgctcggcatatatcggatggcatgctacatgctgca 428 ||||||||||||||||||||||||||||||||||| | ||||||||||| || | ||| Sbjct: 18706011 ggtttaggagcccttctttcaggtgctcggcatattacagatggcatgctccaatcagca 18706070 Query: 429 gctgagtg 436 |||||||| Sbjct: 18706071 gctgagtg 18706078 Score = 79.8 bits (40), Expect = 9e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 310 gcaatggtagaaaaggctatgctaatcaagcaaacaacatgtatctgtttcctggg 365 ||||||||||| |||| || ||||||||||||||||| |||||||||||||||||| Sbjct: 18705863 gcaatggtagacaagggtacgctaatcaagcaaacaatatgtatctgtttcctggg 18705918
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 225 gaatgtacgcctgaagatgtattcaagcatgttggtgaaaatgcagtatttgctagtgga 284 |||||||| ||||||||||||||||| ||||||| || |||||||||||||| |||||| Sbjct: 18716544 gaatgtactcctgaagatgtattcaaatatgttggagacaatgcagtatttgccagtgga 18716603 Query: 285 agccctttcagtaatgttacttta 308 ||||||||||||||||| |||||| Sbjct: 18716604 agccctttcagtaatgtcacttta 18716627 Score = 109 bits (55), Expect = 1e-20 Identities = 70/75 (93%) Strand = Plus / Plus Query: 148 aggttctcaaggctatgaaagaatccgactccccctgccctgcaatttttgcaatgtcca 207 |||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||| Sbjct: 18716387 aggttctcaaggctatgaaagaatccgattcccctcgtcctgcaatttttgcaatgtcca 18716446 Query: 208 acccaacaactaaag 222 ||||||| ||||||| Sbjct: 18716447 acccaactactaaag 18716461 Score = 101 bits (51), Expect = 2e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 498 agtatcaggcacatcaccgcacgtgtcggcgctgcagtcgcccgtgctgctgttgatgaa 557 |||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||| Sbjct: 18717491 agtatcaggcacatcaccgcacgtgtcggcgccgcagtcgtccgtgccgctgttgatgaa 18717550 Query: 558 gat 560 ||| Sbjct: 18717551 gat 18717553 Score = 97.6 bits (49), Expect = 4e-17 Identities = 70/77 (90%) Strand = Plus / Plus Query: 9 gttgctcgttttgctagaggttacggtcctgaagaggtcgaagatctccatgagggggct 68 |||||||| | ||| ||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 18715549 gttgctcgctatgccagaggttttggtcctgaagaggtgcaagatctccatgagggggct 18715608 Query: 69 agtcttgttgaagtggt 85 ||||||||||||||||| Sbjct: 18715609 agtcttgttgaagtggt 18715625 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 83 ggtcaagaaagtgaggcctcatgttcttttaggactatctggagttggcgggatatttaa 142 ||||| |||||||| ||||||||| ||||||||||| ||||||||||| || |||||||| Sbjct: 18715753 ggtcaggaaagtgaagcctcatgtgcttttaggactttctggagttgggggcatatttaa 18715812 Query: 143 cgaggaggt 151 |||||||| Sbjct: 18715813 tgaggaggt 18715821 Score = 79.8 bits (40), Expect = 9e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 436 gccttgcttcatacatcacagatgatgcaattcgaaaaggaatcctctttccttcaattt 495 ||||||| |||||||||||||| |||| |||||||||||| ||||||||||| ||||| | Sbjct: 18717322 gccttgcgtcatacatcacagacgatgaaattcgaaaaggcatcctctttccatcaatct 18717381 Query: 496 caag 499 |||| Sbjct: 18717382 caag 18717385 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 369 ggtttaggagcccttctttcaggtgctcggcatatatcggatggcatgctacatgctgca 428 ||||||||||||||||||||||||||||||||||| | ||||||||||| || | ||| Sbjct: 18716864 ggtttaggagcccttctttcaggtgctcggcatattacagatggcatgctccaatcagca 18716923 Query: 429 gctgagtg 436 |||||||| Sbjct: 18716924 gctgagtg 18716931 Score = 79.8 bits (40), Expect = 9e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 310 gcaatggtagaaaaggctatgctaatcaagcaaacaacatgtatctgtttcctggg 365 ||||||||||| |||| || ||||||||||||||||| |||||||||||||||||| Sbjct: 18716716 gcaatggtagacaagggtacgctaatcaagcaaacaatatgtatctgtttcctggg 18716771
>ref|NM_116281.2| Arabidopsis thaliana malic enzyme/ oxidoreductase, acting on NADH or NADPH, NAD or NADP as acceptor AT4G00570 mRNA, complete cds Length = 2217 Score = 79.8 bits (40), Expect = 9e-12 Identities = 88/104 (84%) Strand = Plus / Plus Query: 75 gttgaagtggtcaagaaagtgaggcctcatgttcttttaggactatctggagttggcggg 134 ||||||||||| |||||||||||||| ||||||||| | || ||||||||||||| || Sbjct: 1305 gttgaagtggtgaagaaagtgaggccacatgttcttcttggtttatctggagttggtggt 1364 Query: 135 atatttaacgaggaggttctcaaggctatgaaagaatccgactc 178 || ||||| || || ||||||||||| ||| |||||| ||||| Sbjct: 1365 atctttaatgaagaagttctcaaggcgatgcgagaatctgactc 1408
>gb|BT000075.1| Arabidopsis thaliana putative malate oxidoreductase (At4g00570) mRNA, complete cds Length = 1964 Score = 79.8 bits (40), Expect = 9e-12 Identities = 88/104 (84%) Strand = Plus / Plus Query: 75 gttgaagtggtcaagaaagtgaggcctcatgttcttttaggactatctggagttggcggg 134 ||||||||||| |||||||||||||| ||||||||| | || ||||||||||||| || Sbjct: 1213 gttgaagtggtgaagaaagtgaggccacatgttcttcttggtttatctggagttggtggt 1272 Query: 135 atatttaacgaggaggttctcaaggctatgaaagaatccgactc 178 || ||||| || || ||||||||||| ||| |||||| ||||| Sbjct: 1273 atctttaatgaagaagttctcaaggcgatgcgagaatctgactc 1316
>gb|BT008375.1| Arabidopsis thaliana At4g00570 gene, complete cds Length = 1824 Score = 79.8 bits (40), Expect = 9e-12 Identities = 88/104 (84%) Strand = Plus / Plus Query: 75 gttgaagtggtcaagaaagtgaggcctcatgttcttttaggactatctggagttggcggg 134 ||||||||||| |||||||||||||| ||||||||| | || ||||||||||||| || Sbjct: 1213 gttgaagtggtgaagaaagtgaggccacatgttcttcttggtttatctggagttggtggt 1272 Query: 135 atatttaacgaggaggttctcaaggctatgaaagaatccgactc 178 || ||||| || || ||||||||||| ||| |||||| ||||| Sbjct: 1273 atctttaatgaagaagttctcaaggcgatgcgagaatctgactc 1316
>gb|AY128396.1| Arabidopsis thaliana putative malate oxidoreductase (At4g00570) mRNA, complete cds Length = 2201 Score = 79.8 bits (40), Expect = 9e-12 Identities = 88/104 (84%) Strand = Plus / Plus Query: 75 gttgaagtggtcaagaaagtgaggcctcatgttcttttaggactatctggagttggcggg 134 ||||||||||| |||||||||||||| ||||||||| | || ||||||||||||| || Sbjct: 1289 gttgaagtggtgaagaaagtgaggccacatgttcttcttggtttatctggagttggtggt 1348 Query: 135 atatttaacgaggaggttctcaaggctatgaaagaatccgactc 178 || ||||| || || ||||||||||| ||| |||||| ||||| Sbjct: 1349 atctttaatgaagaagttctcaaggcgatgcgagaatctgactc 1392
>emb|BX828176.1|CNS0A2G8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH60ZA02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2159 Score = 79.8 bits (40), Expect = 9e-12 Identities = 88/104 (84%) Strand = Plus / Plus Query: 75 gttgaagtggtcaagaaagtgaggcctcatgttcttttaggactatctggagttggcggg 134 ||||||||||| |||||||||||||| ||||||||| | || ||||||||||||| || Sbjct: 1296 gttgaagtggtgaagaaagtgaggccacatgttcttcttggtttatctggagttggtggt 1355 Query: 135 atatttaacgaggaggttctcaaggctatgaaagaatccgactc 178 || ||||| || || ||||||||||| ||| |||||| ||||| Sbjct: 1356 atctttaatgaagaagttctcaaggcgatgcgagaatctgactc 1399
>gb|BT002046.1| Arabidopsis thaliana putative malate oxidoreductase (At4g00570) mRNA, complete cds Length = 2169 Score = 79.8 bits (40), Expect = 9e-12 Identities = 88/104 (84%) Strand = Plus / Plus Query: 75 gttgaagtggtcaagaaagtgaggcctcatgttcttttaggactatctggagttggcggg 134 ||||||||||| |||||||||||||| ||||||||| | || ||||||||||||| || Sbjct: 1303 gttgaagtggtgaagaaagtgaggccacatgttcttcttggtttatctggagttggtggt 1362 Query: 135 atatttaacgaggaggttctcaaggctatgaaagaatccgactc 178 || ||||| || || ||||||||||| ||| |||||| ||||| Sbjct: 1363 atctttaatgaagaagttctcaaggcgatgcgagaatctgactc 1406
>gb|U01162.1|U01162 Amaranthus hypochondriacus C4 photosynthetic NAD-dependent malic enzyme subunit alpha precursor mRNA, complete cds Length = 2283 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 332 taatcaagcaaacaacatgtatctgtttcctgggattggtttaggagcccttctttcagg 391 |||||| | |||||||||||| || ||||||||||||||| |||| | ||| |||||||| Sbjct: 1569 taatcagggaaacaacatgtacctttttcctgggattggtctaggtgtcctcctttcagg 1628
>emb|Z23002.1|MIST59KD S.tuberosum mitochondrial gene for the 59kDa subunit of the NAD+-dependent malic enzyme Length = 2188 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 333 aatcaagcaaacaacatgtatctgtttcctgggattggtttaggagcccttctttcaggt 392 |||||||| || ||||||||||| || ||||| ||||| ||||||| |||||||| || Sbjct: 1520 aatcaagcgaataacatgtatctcttccctggcattgggctaggagctcttctttctggc 1579 Query: 393 gctcg 397 ||||| Sbjct: 1580 gctcg 1584 Score = 42.1 bits (21), Expect = 1.9 Identities = 75/93 (80%) Strand = Plus / Plus Query: 77 tgaagtggtcaagaaagtgaggcctcatgttcttttaggactatctggagttggcgggat 136 |||||||||||| || |||| ||||||||| ||| | || | || |||||||| || || Sbjct: 1264 tgaagtggtcaaaaaggtgaagcctcatgtacttcttggtttgtcaggagttggaggcat 1323 Query: 137 atttaacgaggaggttctcaaggctatgaaaga 169 |||| | |||||||| || | ||| |||||||| Sbjct: 1324 atttcatgaggaggtgctgagggccatgaaaga 1356
>gb|AY107471.1| Zea mays PCO115183 mRNA sequence Length = 1366 Score = 50.1 bits (25), Expect = 0.008 Identities = 82/101 (81%) Strand = Plus / Plus Query: 333 aatcaagcaaacaacatgtatctgtttcctgggattggtttaggagcccttctttcaggt 392 ||||||| ||||||||||| || |||||||| || || | ||| ||||||| || ||| Sbjct: 652 aatcaagggaacaacatgtacctctttcctggaatagggcttggaacccttctgtctggt 711 Query: 393 gctcggcatatatcggatggcatgctacatgctgcagctga 433 |||||| ||| || ||||| ||||| || ||||||||||| Sbjct: 712 gctcgggttatctctgatggaatgctgcaggctgcagctga 752 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 189 gcaatttttgcaatgtccaacccaac 214 |||||||||||||||||||| ||||| Sbjct: 508 gcaatttttgcaatgtccaatccaac 533
>emb|AL161472.2|ATCHRIV2 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 2 Length = 197975 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Minus Query: 87 aagaaagtgaggcctcatgttcttttaggactatctggagttgg 130 |||||||||||||| ||||||||| | || ||||||||||||| Sbjct: 50762 aagaaagtgaggccacatgttcttcttggtttatctggagttgg 50719
>gb|AF058919.2|F6N23 Arabidopsis thaliana BAC F6N23 Length = 91849 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Minus Query: 87 aagaaagtgaggcctcatgttcttttaggactatctggagttgg 130 |||||||||||||| ||||||||| | || ||||||||||||| Sbjct: 31888 aagaaagtgaggccacatgttcttcttggtttatctggagttgg 31845
>emb|AJ404642.1|CAR404642 Cicer arietinum partial ORF for NAD-dependent malic enzyme (malate oxidoreductase), exons 1-4 Length = 1718 Score = 46.1 bits (23), Expect = 0.12 Identities = 95/119 (79%) Strand = Plus / Plus Query: 333 aatcaagcaaacaacatgtatctgtttcctgggattggtttaggagcccttctttcaggt 392 ||||||||||| || ||||| || || || || |||||||| ||| | ||||| |||||| Sbjct: 986 aatcaagcaaataatatgtaccttttcccaggaattggtttgggaacacttctgtcaggt 1045 Query: 393 gctcggcatatatcggatggcatgctacatgctgcagctgagtgccttgcttcatacat 451 |||| | ||| | ||||| ||| | || || || ||||| ||||||||||||||||| Sbjct: 1046 gctcatcttattacagatggaatgttgcaggcagctgctgaatgccttgcttcatacat 1104
>ref|NM_126936.2| Arabidopsis thaliana malic enzyme/ oxidoreductase, acting on NADH or NADPH, NAD or NADP as acceptor AT2G13560 mRNA, complete cds Length = 2113 Score = 44.1 bits (22), Expect = 0.49 Identities = 49/58 (84%) Strand = Plus / Plus Query: 186 cctgcaatttttgcaatgtccaacccaacaactaaagctgaatgtacgcctgaagatg 243 ||||| || ||||||||||| ||||| |||| || |||||||| |||||| |||||| Sbjct: 1494 cctgctatatttgcaatgtcaaaccccacaaaaaatgctgaatgcacgcctcaagatg 1551
>gb|BT000996.1| Arabidopsis thaliana clone U19925 putative malate oxidoreductase (malic enzyme) (At2g13560) mRNA, complete cds Length = 1902 Score = 44.1 bits (22), Expect = 0.49 Identities = 49/58 (84%) Strand = Plus / Plus Query: 186 cctgcaatttttgcaatgtccaacccaacaactaaagctgaatgtacgcctgaagatg 243 ||||| || ||||||||||| ||||| |||| || |||||||| |||||| |||||| Sbjct: 1369 cctgctatatttgcaatgtcaaaccccacaaaaaatgctgaatgcacgcctcaagatg 1426
>gb|AY091108.1| Arabidopsis thaliana putative malate oxidoreductase (malic enzyme) (At2g13560) mRNA, complete cds Length = 2181 Score = 44.1 bits (22), Expect = 0.49 Identities = 49/58 (84%) Strand = Plus / Plus Query: 186 cctgcaatttttgcaatgtccaacccaacaactaaagctgaatgtacgcctgaagatg 243 ||||| || ||||||||||| ||||| |||| || |||||||| |||||| |||||| Sbjct: 1495 cctgctatatttgcaatgtcaaaccccacaaaaaatgctgaatgcacgcctcaagatg 1552
>gb|AC122891.4| Mus musculus BAC clone RP23-66J6 from 12, complete sequence Length = 205784 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 ccgactccccctgccctgcaa 192 ||||||||||||||||||||| Sbjct: 2708 ccgactccccctgccctgcaa 2688
>emb|AL391838.9| Human DNA sequence from clone RP11-307O11 on chromosome 13, complete sequence Length = 146127 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 cccctgccctgcaatttttgc 199 ||||||||||||||||||||| Sbjct: 81962 cccctgccctgcaatttttgc 81942
>emb|AL009031.1|HS467D16 Human DNA sequence from clone RP3-467D16 on chromosome 6p22.3-24.1 Contains the 5' end of the SCA1 gene for spinocerebellar ataxia 1 (olivopontocerebellar ataxia 1, autosomal dominant, ataxin 1) with a poly-glutamine (CAG repeat) polymorphism and the 3' part of the GMPR gene for GMP reductase, Guanosine 5'-monophosphate oxidoreductase, complete sequence Length = 143583 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 aagccctttcagtaatgttac 304 ||||||||||||||||||||| Sbjct: 23658 aagccctttcagtaatgttac 23638
>ref|XM_965514.1| PREDICTED: Tribolium castaneum similar to CG1318-PA, isoform A (LOC659187), mRNA Length = 1797 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 390 ggtgctcggcatatatcggatggca 414 |||||||| |||||||||||||||| Sbjct: 1463 ggtgctcgccatatatcggatggca 1487
>emb|Z23023.1|STMALDEHB S.tuberosum mRNA for precursor of the mitochondrial NAD+-dependent malic enzyme (malate dehydrogenase) Length = 2251 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 408 gatggcatgctacatgctgcagctgagtg 436 ||||||||| |||| |||||||||||||| Sbjct: 1628 gatggcatgttacaggctgcagctgagtg 1656 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 186 cctgcaatttttgcaatgtccaacccaac 214 |||||||||||| ||||||| |||||||| Sbjct: 1406 cctgcaatttttccaatgtcaaacccaac 1434
>gb|AC008916.7| Homo sapiens chromosome 5 clone CTD-2271P9, complete sequence Length = 133862 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 tcaagcaaacaacatgtatct 355 ||||||||||||||||||||| Sbjct: 67552 tcaagcaaacaacatgtatct 67572
>gb|AC148817.3| Medicago truncatula chromosome 7 BAC clone mth2-22c10, complete sequence Length = 123020 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 333 aatcaagcaaacaacatgtatctgtttcc 361 |||||||| ||||||||||| |||||||| Sbjct: 35961 aatcaagccaacaacatgtacctgtttcc 35933
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 519 cgtgtcggcgctgcagtcgcc 539 ||||||||||||||||||||| Sbjct: 24626933 cgtgtcggcgctgcagtcgcc 24626953
>gb|AC008959.4|AC008959 Homo sapiens chromosome 5 clone CTD-2354D23, complete sequence Length = 98620 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 tcaagcaaacaacatgtatct 355 ||||||||||||||||||||| Sbjct: 9457 tcaagcaaacaacatgtatct 9477
>dbj|AP000364.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0026F07 Length = 137354 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 519 cgtgtcggcgctgcagtcgcc 539 ||||||||||||||||||||| Sbjct: 135193 cgtgtcggcgctgcagtcgcc 135213
>gb|BC084421.1| Xenopus laevis hypothetical LOC495193, mRNA (cDNA clone MGC:86381 IMAGE:7011145), complete cds Length = 1160 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 cctttcagtaatgttacttta 308 ||||||||||||||||||||| Sbjct: 1082 cctttcagtaatgttacttta 1102
>gb|AC124711.3| Mus musculus BAC clone RP24-100M12 from 12, complete sequence Length = 225134 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 ccgactccccctgccctgcaa 192 ||||||||||||||||||||| Sbjct: 216866 ccgactccccctgccctgcaa 216846
>gb|AC002326.1|AC002326 Genomic sequence from Human 6, complete sequence Length = 148750 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 aagccctttcagtaatgttac 304 ||||||||||||||||||||| Sbjct: 34485 aagccctttcagtaatgttac 34465
>ref|NM_127548.2| Arabidopsis thaliana malic enzyme/ oxidoreductase, acting on NADH or NADPH, NAD or NADP as acceptor AT2G19900 mRNA, complete cds Length = 2003 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 tttgctagtggaagcccttt 292 |||||||||||||||||||| Sbjct: 1425 tttgctagtggaagcccttt 1444
>gb|AC115065.11| Mus musculus chromosome 3, clone RP24-401H12, complete sequence Length = 157225 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 catgctgcagctgagtgcct 439 |||||||||||||||||||| Sbjct: 25985 catgctgcagctgagtgcct 26004
>gb|AF092870.1| Lagidium viscacia microsatellite LV4 Length = 229 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 tgaagtggtcaagaaagtga 96 |||||||||||||||||||| Sbjct: 198 tgaagtggtcaagaaagtga 179
>ref|XM_422891.1| PREDICTED: Gallus gallus similar to Mibp-pen protein (LOC425099), partial mRNA Length = 577 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 42 gaggtcgaagatctccatgagggg 65 ||||||||||| |||||||||||| Sbjct: 530 gaggtcgaagagctccatgagggg 507
>gb|AF127019.7| Homo sapiens chromosome 8 clone GS1-188e4 map p23.2, complete sequence Length = 182548 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 taagcaatggtagaaaaggc 326 |||||||||||||||||||| Sbjct: 7925 taagcaatggtagaaaaggc 7944
>gb|AC131110.3| Mus musculus BAC clone RP23-387J23 from chromosome 6, complete sequence Length = 205463 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 attggtttaggagcccttct 385 |||||||||||||||||||| Sbjct: 101327 attggtttaggagcccttct 101346
>ref|XM_500326.1| Yarrowia lipolytica CLIB122, YALI0A21307g predicted mRNA Length = 1728 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 tgaagaggtcgaagatctccatga 61 |||||||| ||||||||||||||| Sbjct: 1567 tgaagagggcgaagatctccatga 1544
>emb|AL645571.18| Mouse DNA sequence from clone RP23-39H1 on chromosome 11 Contains a general transcription factor II A, 1 (Gtf2a1) pseudogene, the 3' end of the Pkd1l1 gene for polycystic kidney disease 1 like 1 and a heterogeneous nuclear ribonucleoprotein A3 (Hnrpa3) pseudogene, complete sequence Length = 235198 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 aacccaacaactaaagctga 226 |||||||||||||||||||| Sbjct: 4058 aacccaacaactaaagctga 4039
>gb|AC153634.3| Mus musculus 6 BAC RP23-368O2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190237 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 attggtttaggagcccttct 385 |||||||||||||||||||| Sbjct: 182061 attggtttaggagcccttct 182042
>gb|AC005169.3| Arabidopsis thaliana chromosome 2 clone F6F22 map mi148, complete sequence Length = 126386 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 tttgctagtggaagcccttt 292 |||||||||||||||||||| Sbjct: 30661 tttgctagtggaagcccttt 30680
>gb|AY062734.1| Arabidopsis thaliana malate oxidoreductase (malic enzyme) (At2g19900; F6F22.7) mRNA, complete cds Length = 2003 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 tttgctagtggaagcccttt 292 |||||||||||||||||||| Sbjct: 1425 tttgctagtggaagcccttt 1444
>gb|BT003371.1| Arabidopsis thaliana malate oxidoreductase (malic enzyme) (At2g19900) mRNA, complete cds Length = 1795 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 tttgctagtggaagcccttt 292 |||||||||||||||||||| Sbjct: 1375 tttgctagtggaagcccttt 1394
>gb|AC006210.4| Homo sapiens X BAC GS1-309P15 (Genome Systems Human BAC Library) complete sequence Length = 185638 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 gctagtggaagccctttcag 295 |||||||||||||||||||| Sbjct: 115630 gctagtggaagccctttcag 115611
>emb|BX511240.5| Zebrafish DNA sequence from clone CH211-113H10, complete sequence Length = 175187 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 ccctgcaatttttgcaatgt 204 |||||||||||||||||||| Sbjct: 132496 ccctgcaatttttgcaatgt 132477
>dbj|AB054125.1| Cobitis striata mitochondrial DNA, complete genome Length = 16572 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 ccaacccaacaactaaagct 224 |||||||||||||||||||| Sbjct: 14252 ccaacccaacaactaaagct 14271
>gb|AC149333.2| Phakopsora pachyrhizi clone JGIAFNA-25D11, complete sequence Length = 37057 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 gtgctgctgttgatgaagat 560 |||||||||||||||||||| Sbjct: 13582 gtgctgctgttgatgaagat 13563
>emb|CT573324.3| CH251-10E6, complete sequence Length = 169419 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 gctagtggaagccctttcag 295 |||||||||||||||||||| Sbjct: 111839 gctagtggaagccctttcag 111820
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 38 tgaagaggtcgaagatctccatga 61 |||||||| ||||||||||||||| Sbjct: 2276502 tgaagagggcgaagatctccatga 2276525 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,993,554 Number of Sequences: 3902068 Number of extensions: 4993554 Number of successful extensions: 95958 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 55 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 95732 Number of HSP's gapped (non-prelim): 225 length of query: 561 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 538 effective length of database: 17,143,297,704 effective search space: 9223094164752 effective search space used: 9223094164752 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)