ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags9m18 |
|---|---|
| Clone Library Name | barley_pub |
>PUR8_HAEIN (P44797) Adenylosuccinate lyase (EC 4.3.2.2) (Adenylosuccinase)| (ASL) Length = 456 Score = 74.3 bits (181), Expect = 1e-13 Identities = 35/63 (55%), Positives = 45/63 (71%) Frame = +3 Query: 267 MMALSPLDGRYIRFIKDLMPFFSEFGLIRYRVLVEVKWLLKLSQIPEVKEVPPFSQEAQL 446 + ALSPLDGRY + L FSEFGL+++RV VEV+WL KL+ ++ EVPPFS +A Sbjct: 6 LTALSPLDGRYQDKVTPLRAIFSEFGLMKFRVAVEVRWLQKLASTADITEVPPFSTQANA 65 Query: 447 FLD 455 FLD Sbjct: 66 FLD 68
>PUR8_ECOLI (P0AB89) Adenylosuccinate lyase (EC 4.3.2.2) (Adenylosuccinase)| (ASL) Length = 456 Score = 62.4 bits (150), Expect = 5e-10 Identities = 30/63 (47%), Positives = 44/63 (69%) Frame = +3 Query: 267 MMALSPLDGRYIRFIKDLMPFFSEFGLIRYRVLVEVKWLLKLSQIPEVKEVPPFSQEAQL 446 + A+SP+DGRY + L FSE+GL+++RV VEV+WL KL+ +KEVP F+ +A Sbjct: 6 LTAVSPVDGRYGDKVSALRGIFSEYGLLKFRVQVEVRWLQKLAAHAAIKEVPAFAADAIG 65 Query: 447 FLD 455 +LD Sbjct: 66 YLD 68
>PUR8_ECOL6 (P0AB90) Adenylosuccinate lyase (EC 4.3.2.2) (Adenylosuccinase)| (ASL) Length = 456 Score = 62.4 bits (150), Expect = 5e-10 Identities = 30/63 (47%), Positives = 44/63 (69%) Frame = +3 Query: 267 MMALSPLDGRYIRFIKDLMPFFSEFGLIRYRVLVEVKWLLKLSQIPEVKEVPPFSQEAQL 446 + A+SP+DGRY + L FSE+GL+++RV VEV+WL KL+ +KEVP F+ +A Sbjct: 6 LTAVSPVDGRYGDKVSALRGIFSEYGLLKFRVQVEVRWLQKLAAHAAIKEVPAFAADAIG 65 Query: 447 FLD 455 +LD Sbjct: 66 YLD 68
>PUR8_BUCAP (Q8K9Q7) Adenylosuccinate lyase (EC 4.3.2.2) (Adenylosuccinase)| (ASL) Length = 456 Score = 58.2 bits (139), Expect = 1e-08 Identities = 27/63 (42%), Positives = 40/63 (63%) Frame = +3 Query: 267 MMALSPLDGRYIRFIKDLMPFFSEFGLIRYRVLVEVKWLLKLSQIPEVKEVPPFSQEAQL 446 + A+SP+DGRY K L FSEFG ++YR+ VE++WL KL + ++ E+ + L Sbjct: 6 LTAISPIDGRYSNSTKLLRNIFSEFGFLKYRLYVEIQWLKKLINMHQILEIKKVEKTDIL 65 Query: 447 FLD 455 FLD Sbjct: 66 FLD 68
>PUR8_BUCAI (P57351) Adenylosuccinate lyase (EC 4.3.2.2) (Adenylosuccinase)| (ASL) Length = 456 Score = 53.1 bits (126), Expect = 3e-07 Identities = 24/63 (38%), Positives = 39/63 (61%) Frame = +3 Query: 267 MMALSPLDGRYIRFIKDLMPFFSEFGLIRYRVLVEVKWLLKLSQIPEVKEVPPFSQEAQL 446 + A+SP+DGRY L FSEFG ++YR+ +EV+WL K+ + ++ ++ + L Sbjct: 6 LTAISPVDGRYSNLTILLRNIFSEFGFLKYRLNIEVQWLKKIISMSQILDINNIEYKEIL 65 Query: 447 FLD 455 FLD Sbjct: 66 FLD 68
>PUR8_BUCBP (Q89AM3) Adenylosuccinate lyase (EC 4.3.2.2) (Adenylosuccinase)| (ASL) Length = 460 Score = 47.8 bits (112), Expect = 1e-05 Identities = 21/51 (41%), Positives = 33/51 (64%) Frame = +3 Query: 267 MMALSPLDGRYIRFIKDLMPFFSEFGLIRYRVLVEVKWLLKLSQIPEVKEV 419 + A+SP+DGRY + L FSE+ +++RV +E+ WL K+S + E K V Sbjct: 6 LFAISPIDGRYSSKVIKLRNIFSEYAFLKFRVTIELLWLKKISLLQEFKIV 56
>DNMT1_CHICK (Q92072) DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Dnmt1)| (DNA methyltransferase GgaI) (DNA MTase GgaI) (MCMT) (M.GgaI) Length = 1537 Score = 32.7 bits (73), Expect = 0.45 Identities = 23/79 (29%), Positives = 38/79 (48%) Frame = -2 Query: 295 RPSRGDSAIIQKLSRSVACSSSSTDLAAQPRGALITPKSLAPAPTAAEQRRRRGGCAVAP 116 R RG+ ++ + + A SSSS+ ++ + + SL PAP A + RR R Sbjct: 112 RGGRGEDGAME-VEEAAASSSSSSSSSSSSSSSSSSSSSLLPAPRARKARRSRSNGESKK 170 Query: 115 STAALGAAVTRGEARKAAV 59 S A+ + VTR R+ + Sbjct: 171 SPAS--SRVTRSSGRQPTI 187
>PHYK1_ORYSA (Q7XR51) Probable phytol kinase 1, chloroplast precursor (EC| 2.7.-.-) Length = 314 Score = 31.2 bits (69), Expect = 1.3 Identities = 28/70 (40%), Positives = 32/70 (45%), Gaps = 6/70 (8%) Frame = -2 Query: 253 RSVACSSSSTDLAAQPRGALITPKS--LAPAPTAAEQRRRR----GGCAVAPSTAALGAA 92 R CSSS +AA L KS +PA AA RRR G A AP+ AAL A+ Sbjct: 12 RHFPCSSS---VAASSSLLLSRSKSRLASPAAAAASSMRRRLVLGVGAAAAPAVAALAAS 68 Query: 91 VTRGEARKAA 62 T R A Sbjct: 69 ATPAALRDCA 78 Score = 28.5 bits (62), Expect = 8.4 Identities = 32/117 (27%), Positives = 47/117 (40%), Gaps = 13/117 (11%) Frame = +3 Query: 45 LKSPATAAFLASPR-------VTAAPRAAVLGATAQPPRRLRCSAAVGAGARDFGVMSAP 203 L SPA AA + R AAP A L A+A P C+A + A + ++ A Sbjct: 35 LASPAAAAASSMRRRLVLGVGAAAAPAVAALAASATPAALRDCAATLLITAGAYSLVRAF 94 Query: 204 LGWAARSVEELEQATD----LDSFCMMALSPL--DGRYIRFIKDLMPFFSEFGLIRY 356 G AR + E + L M+ PL + RF ++P + L+ Y Sbjct: 95 DGLTARRLIEQNLSRKIVHVLSGVLFMSSWPLFSNSTEARFFAAIVPLLNCIRLLTY 151
>FMN1A_MOUSE (Q05860) Formin-1 isoforms I/II/III (Limb deformity protein)| Length = 1468 Score = 31.2 bits (69), Expect = 1.3 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Frame = -2 Query: 295 RPSRGDSAIIQKLSRSVACSSSSTDLAAQPRGALITPK-SLAPAPTAAEQRRRRGGC 128 R RG ++ + CSSSS A+P L+ + +LAP T RRR C Sbjct: 179 RKGRGCQESAFQMGKDQVCSSSSLSFRARPNLRLLEERGNLAPRGTLTSSLRRRESC 235
>LRRK1_HUMAN (Q38SD2) Leucine-rich repeat serine/threonine-protein kinase 1 (EC| 2.7.11.1) Length = 2038 Score = 30.8 bits (68), Expect = 1.7 Identities = 22/78 (28%), Positives = 35/78 (44%) Frame = -2 Query: 310 INLMYRPSRGDSAIIQKLSRSVACSSSSTDLAAQPRGALITPKSLAPAPTAAEQRRRRGG 131 +++MY G +I + S + CS SS ++ PR A +P SL +P ++ Sbjct: 1839 VSIMYSEELGTQILIHQESLTDYCSMSSYS-SSPPRQAARSPSSLPSSPASSSSVPFSTD 1897 Query: 130 CAVAPSTAALGAAVTRGE 77 C + GAA R E Sbjct: 1898 CEDSDMLHTPGAASDRSE 1915
>VE2_HPV47 (P22420) Regulatory protein E2| Length = 506 Score = 30.4 bits (67), Expect = 2.2 Identities = 31/116 (26%), Positives = 47/116 (40%) Frame = -2 Query: 454 SRKS*ASWLNGGTSLTSGICESFSNHLTSTKTRYLMRPNSLKKGIKSLINLMYRPSRGDS 275 SR +S + T+ T+ S S L T+ R R S +S R RG S Sbjct: 272 SRSRSSSQTHSSTTTTTTTYRSRSTSLNKTRARSRSRSTS-----RSTSTTSRRGGRGSS 326 Query: 274 AIIQKLSRSVACSSSSTDLAAQPRGALITPKSLAPAPTAAEQRRRRGGCAVAPSTA 107 ++ SRS + +S RG + A + EQRRRR + +P ++ Sbjct: 327 T--RQRSRSPSTYTSKRSREGNTRGRGRGRQGRAGSSGGREQRRRRRSFSTSPDSS 380
>PRAX_HUMAN (Q9BXM0) Periaxin| Length = 1461 Score = 29.6 bits (65), Expect = 3.8 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = +3 Query: 87 VTAAPRAAVLGATAQPPRRLRCSAAVGAGAR 179 V +AA L A A PPR+ + A V AGAR Sbjct: 198 VAEEAQAARLAAAAPPPRKAKVEAEVAAGAR 228
>VGLX_EHV1B (P28968) Glycoprotein X precursor| Length = 797 Score = 29.3 bits (64), Expect = 4.9 Identities = 31/125 (24%), Positives = 43/125 (34%) Frame = -2 Query: 439 ASWLNGGTSLTSGICESFSNHLTSTKTRYLMRPNSLKKGIKSLINLMYRPSRGDSAIIQK 260 +S G S +SG S S+ TS T P S S + +A Sbjct: 33 SSTSGSGQSTSSGTTNSSSSPTTSPPTTSSSPPTSTHTSSPSSTSTQ----SSSTAATSS 88 Query: 259 LSRSVACSSSSTDLAAQPRGALITPKSLAPAPTAAEQRRRRGGCAVAPSTAALGAAVTRG 80 + S A S++S + TP + PT AP+TAA AVT Sbjct: 89 SAPSTASSTTSIPTSTSTETTTTTPTASTTTPTTT---------TAAPTTAATTTAVTTA 139 Query: 79 EARKA 65 + A Sbjct: 140 ASTSA 144
>FRU_DROME (Q8IN81) Sex determination protein fruitless| Length = 955 Score = 29.3 bits (64), Expect = 4.9 Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 3/81 (3%) Frame = -2 Query: 286 RGDSAIIQKLSRSVACSSSSTDLAAQPRGALITPKSLA---PAPTAAEQRRRRGGCAVAP 116 R S++ ++ S + A ++++ +AA G + ++A PT E+ G + A Sbjct: 281 RSSSSMSERSSAAAAAAAAAAAVAAA--GGNVNAAAVALGLTTPTGGERSPSVGSASAAA 338 Query: 115 STAALGAAVTRGEARKAAVAG 53 + AA+ AAV R A+ G Sbjct: 339 AAAAVAAAVAAAANRSASADG 359
>MATK_BROPL (Q5YB04) Maturase K (Intron maturase)| Length = 511 Score = 29.3 bits (64), Expect = 4.9 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +3 Query: 327 FFSEFGLIRYRVLVEVKWLLKLSQIPEVKEVP 422 FFS+ + V+VE+ + L+L PE KE+P Sbjct: 96 FFSQMISESFAVIVEIPFSLRLVSFPEEKEIP 127
>SMYD4_PONPY (Q5R5X9) SET and MYND domain-containing protein 4| Length = 804 Score = 29.3 bits (64), Expect = 4.9 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +3 Query: 228 EELEQATDLDSFCMMALSPLDGRYIRFIKDLMP 326 EE EQ + S + + PL GRY+ KD++P Sbjct: 223 EENEQLSSASSSVGLCIDPLKGRYLVATKDILP 255
>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor| Length = 866 Score = 29.3 bits (64), Expect = 4.9 Identities = 31/125 (24%), Positives = 43/125 (34%) Frame = -2 Query: 439 ASWLNGGTSLTSGICESFSNHLTSTKTRYLMRPNSLKKGIKSLINLMYRPSRGDSAIIQK 260 +S G S +SG S S+ TS T P S S + +A Sbjct: 33 SSTSGSGQSTSSGTTNSSSSPTTSPPTTSSSPPTSTHTSSPSSTSTQ----SSSTAATSS 88 Query: 259 LSRSVACSSSSTDLAAQPRGALITPKSLAPAPTAAEQRRRRGGCAVAPSTAALGAAVTRG 80 + S A S++S + TP + PT AP+TAA AVT Sbjct: 89 SAPSTASSTTSIPTSTSTETTTTTPTASTTTPTTT---------TAAPTTAATTTAVTTA 139 Query: 79 EARKA 65 + A Sbjct: 140 ASTSA 144
>PLSB_MYCTU (O53207) Glycerol-3-phosphate acyltransferase (EC 2.3.1.15) (GPAT)| Length = 789 Score = 28.9 bits (63), Expect = 6.4 Identities = 22/72 (30%), Positives = 34/72 (47%) Frame = -2 Query: 391 SFSNHLTSTKTRYLMRPNSLKKGIKSLINLMYRPSRGDSAIIQKLSRSVACSSSSTDLAA 212 S+S T ++T ++ P K G+ S + Y R D ++Q +S T+ AA Sbjct: 351 SWSIEGTRSRTGKMLPP---KLGLMSYVADAYLDGRSDDILLQGVSICFDQLHEITEYAA 407 Query: 211 QPRGALITPKSL 176 RGA TP+ L Sbjct: 408 YARGAEKTPEGL 419
>PLSB_MYCBO (Q7TYH5) Glycerol-3-phosphate acyltransferase (EC 2.3.1.15) (GPAT)| Length = 789 Score = 28.9 bits (63), Expect = 6.4 Identities = 22/72 (30%), Positives = 34/72 (47%) Frame = -2 Query: 391 SFSNHLTSTKTRYLMRPNSLKKGIKSLINLMYRPSRGDSAIIQKLSRSVACSSSSTDLAA 212 S+S T ++T ++ P K G+ S + Y R D ++Q +S T+ AA Sbjct: 351 SWSIEGTRSRTGKMLPP---KLGLMSYVADAYLDGRSDDILLQGVSICFDQLHEITEYAA 407 Query: 211 QPRGALITPKSL 176 RGA TP+ L Sbjct: 408 YARGAEKTPEGL 419
>B3GT6_HUMAN (Q96L58) Beta-1,3-galactosyltransferase 6 (EC 2.4.1.134) (beta| 3GalT6) (Galactosylxylosylprotein 3-beta-galactosyltransferase) (UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 6) (Galactosyltransferase II) (GAG GalTII) Length = 329 Score = 28.9 bits (63), Expect = 6.4 Identities = 27/76 (35%), Positives = 34/76 (44%) Frame = +3 Query: 51 SPATAAFLASPRVTAAPRAAVLGATAQPPRRLRCSAAVGAGARDFGVMSAPLGWAARSVE 230 +PA AA + V +APRAA + + R A AR F V +A LG R Sbjct: 51 APARAAAFLAVLVASAPRAAERRSVIRSTWLARRGAPGDVWAR-FAVGTAGLGAEERRAL 109 Query: 231 ELEQATDLDSFCMMAL 278 E EQA D + AL Sbjct: 110 EREQARHGDLLLLPAL 125
>RL21_PYRAE (Q8ZTB5) 50S ribosomal protein L21e| Length = 100 Score = 28.9 bits (63), Expect = 6.4 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = -2 Query: 364 KTRYLMRPNSLKKGIKSLINLMYRPSRGDSAII 266 KTR L+R +KG+ L L+Y GD II Sbjct: 11 KTRKLLRKKPREKGLSGLSRLLYEYKVGDKVII 43
>MUC1_YEAST (P08640) Mucin-like protein 1 precursor| Length = 1367 Score = 28.5 bits (62), Expect = 8.4 Identities = 27/107 (25%), Positives = 41/107 (38%) Frame = -2 Query: 412 LTSGICESFSNHLTSTKTRYLMRPNSLKKGIKSLINLMYRPSRGDSAIIQKLSRSVACSS 233 +TS ES S +TS+ T P + S + + SA + SS Sbjct: 410 VTSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVP------TPSS 463 Query: 232 SSTDLAAQPRGALITPKSLAPAPTAAEQRRRRGGCAVAPSTAALGAA 92 S+T+ ++ P + T S AP PT + V ST +A Sbjct: 464 STTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSA 510
>MLH1_SCHPO (Q9P7W6) Putative MUTL protein homolog 1 (DNA mismatch repair| protein MLH1) Length = 684 Score = 28.5 bits (62), Expect = 8.4 Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 3/62 (4%) Frame = -2 Query: 394 ESFSNHLTSTKTRYLMRPNSLKKGIKSLI--NLMYRPSRG-DSAIIQKLSRSVACSSSST 224 ES S T YL+R + ++ IKS++ N + R S D+ II+K+ + + +++ Sbjct: 370 ESSSQKAVRTYENYLVRTDPRERSIKSMLSDNFLQRSSNNYDNEIIEKVDSANSNKNATN 429 Query: 223 DL 218 D+ Sbjct: 430 DI 431
>LDOX_MAIZE (P41213) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX)| (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) Length = 395 Score = 28.5 bits (62), Expect = 8.4 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = +3 Query: 78 SPRVTAAPRAAVLGATAQPPRRLRCSAAVGAGARDFGVM 194 +PR+ + L +++Q +R C AV A A D+GVM Sbjct: 55 APRIPVVDISPFLDSSSQQQQRDECVEAVRAAAADWGVM 93
>APX7_ORYSA (Q7XJ02) Probable L-ascorbate peroxidase 7, chloroplast precursor| (EC 1.11.1.11) Length = 359 Score = 28.5 bits (62), Expect = 8.4 Identities = 24/73 (32%), Positives = 30/73 (41%), Gaps = 5/73 (6%) Frame = -2 Query: 244 ACSSSSTDL--AAQPRGALI---TPKSLAPAPTAAEQRRRRGGCAVAPSTAALGAAVTRG 80 A SS+T L A PR + P L P A R C + S +A AAV G Sbjct: 29 AARSSTTALLPVALPRASATLRAAPSRLLPQEAKAAGSGRSVMCMASASASAASAAVASG 88 Query: 79 EARKAAVAGDLRK 41 A A D+R+ Sbjct: 89 AAELKAAREDIRE 101
>HTPG_SHEON (Q8EFF7) Chaperone protein htpG (Heat shock protein htpG) (High| temperature protein G) Length = 637 Score = 28.5 bits (62), Expect = 8.4 Identities = 14/55 (25%), Positives = 28/55 (50%) Frame = -2 Query: 448 KS*ASWLNGGTSLTSGICESFSNHLTSTKTRYLMRPNSLKKGIKSLINLMYRPSR 284 K+ A W+ + +T + F H++ T L+ ++ +G + NL+Y PS+ Sbjct: 238 KATALWMRNKSEITDEEYQEFYKHISHDYTDALLWSHNRVEGKQEYTNLLYIPSK 292
>AURB_CHLAU (P27197) Auracyanin B precursor (Ac-B) [Contains: Auracyanin B-1;| Auracyanin B-2] Length = 235 Score = 28.5 bits (62), Expect = 8.4 Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 2/81 (2%) Frame = +3 Query: 45 LKSPATAA--FLASPRVTAAPRAAVLGATAQPPRRLRCSAAVGAGARDFGVMSAPLGWAA 218 + S ATA A+PR TA PR A QPP +A A G + A Sbjct: 52 IASNATAGGFVAATPRPTATPRPTAAPAPTQPPAAQPTTAPATQAANAPGGSNVVNETPA 111 Query: 219 RSVEELEQATDLDSFCMMALS 281 ++V E+ A D +F +LS Sbjct: 112 QTV-EVRAAPDALAFAQTSLS 131
>ANP4_PSEAM (P02734) Ice-structuring protein 4 precursor (ISP 4) (Antifreeze| peptide 4) Length = 85 Score = 28.5 bits (62), Expect = 8.4 Identities = 20/54 (37%), Positives = 22/54 (40%) Frame = -2 Query: 223 DLAAQPRGALITPKSLAPAPTAAEQRRRRGGCAVAPSTAALGAAVTRGEARKAA 62 D A P A + S A A AA A +TAA AA T A KAA Sbjct: 11 DAKAVPAAAAPSTASDAAAAAAATAATAAAAAAATAATAAAAAAATAATAAKAA 64 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,448,676 Number of Sequences: 219361 Number of extensions: 887511 Number of successful extensions: 4062 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 3846 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4048 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
