>IF2_SYMTH (Q67P86) Translation initiation factor IF-2|
          Length = 1044

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = +2

Query: 26  SALXNASPSDEATTKPLQPVEVNPISWAAPLASE--PASHADEPVGSADVKPARKRKAEG 199
           +A   A+P ++A   P+          A P A+E  PA  A++  G+A  KPAR     G
Sbjct: 194 AAAAKAAPPEKAGAAPVPGAVAEQKQAATPAAAEQKPAGKAEQTAGAAQAKPARAEAGTG 253

Query: 200 SEPGEANA 223
           +    A+A
Sbjct: 254 ASSRPASA 261

>NEUM_CHICK (P35001) Neuromodulin (Axonal membrane protein GAP-43)|
           (Growth-associated protein 43)
          Length = 246

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
 Frame = +2

Query: 2   SAAXTMSKSALXNASPSDEATTKPLQPVEVNPISWAAPLASE-PASHADEPVGSADVKPA 178
           S A T ++++  +++  DE +     P E    + AA   SE PA  A  P  S++ KPA
Sbjct: 85  SEASTATEASAADSAQLDEGSKDSSVPTEEKKGNGAADTGSEQPAPQAATPAASSEEKPA 144

Query: 179 RKRKAEGSEPGEA-NANNHVSDGPETK 256
              + E +      N+ +  +D  +TK
Sbjct: 145 AAAETESATKASTDNSPSLKADEAKTK 171

>CHS5_YEAST (Q12114) Chitin biosynthesis protein CHS5 (Protein CAL3)|
          Length = 671

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
 Frame = +2

Query: 20  SKSALXNASPSDEATT---KPLQPVEVNPISWAAPLASEPASHADEPVGSAD--VKPARK 184
           ++SA  N  P+D+A     +P   +E   ++ +   A+EPA  ++EPV  ++  VK + K
Sbjct: 438 TESAGENNEPADDAAMEFGRPEAEIETPEVNESIEDANEPAEDSNEPVEDSNKPVKDSNK 497

Query: 185 RKAEGSEPGEANANNHVSD 241
              + ++P E ++N  V D
Sbjct: 498 PVEDSNKPVE-DSNKPVED 515

>IF2_XANC5 (Q3BRP5) Translation initiation factor IF-2|
          Length = 904

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 2/94 (2%)
 Frame = +2

Query: 5   AAXTMSKSALXNASPSDEATTKPLQPVEVNPISWAAPLASEPASHADEPVGS--ADVKPA 178
           AA   +++    A  +  A + P    +    S AAP A  P+S +  P  +  A   PA
Sbjct: 164 AAKDRAEAERKAAEEAAAAASAPAPVADAPTPSAAAPAARSPSSPSSAPRAARPAGASPA 223

Query: 179 RKRKAEGSEPGEANANNHVSDGPETKLEGAQNGD 280
            +  A       +NA  H + G    + G ++ D
Sbjct: 224 SRPAAPARADDRSNAAKHKTRGSHVMVAGVEDDD 257

>PCLO_CHICK (Q9PU36) Protein piccolo (Aczonin) (Fragment)|
          Length = 5120

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 20/67 (29%), Positives = 28/67 (41%)
 Frame = +2

Query: 23  KSALXNASPSDEATTKPLQPVEVNPISWAAPLASEPASHADEPVGSADVKPARKRKAEGS 202
           K A  + + SD  T KP +P         AP+  +P     +P    D KPA K    G+
Sbjct: 606 KLASQSGAKSDAKTQKPSEP---------APVKDDPKKLQTKPAPKPDTKPAPKGPQAGT 656

Query: 203 EPGEANA 223
            P   +A
Sbjct: 657 GPRPTSA 663

>IMMI_ECOLI (P08701) Colicin-Ia immunity protein|
          Length = 111

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
 Frame = +1

Query: 271 EWRCYHHCLKSCSLT-YPVL--YVDDFLVSIFLVHYMREPFFSVTRRRNGLICVYQGT 435
           ++R    C+  C +  YPV   Y++D  +      +    FF+ T  + GL+ VY GT
Sbjct: 30  KYRLLFWCISLCGMVLYPVAKWYIEDTALKFTRPDFWNSGFFADTPGKMGLLAVYTGT 87

>NUP62_HUMAN (P37198) Nuclear pore glycoprotein p62 (62 kDa nucleoporin)|
          Length = 522

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 23/68 (33%), Positives = 32/68 (47%)
 Frame = -1

Query: 309 TAAFQAVVVASPF*APSNLVSGPSDTWLLAFASPGSEPSAFLFRAGFTSADPTGSSA*EA 130
           T A  + V +S   AP+  V GPS T      +P +    F F  G T A P+G +   A
Sbjct: 122 TNAISSTVTSSQGTAPTGFVFGPSTT----SVAPATTSGGFSFTGGST-AQPSGFNIGSA 176

Query: 129 GSLARGAA 106
           G+ A+  A
Sbjct: 177 GNSAQPTA 184

>FTSK_ECOLI (P46889) DNA translocase ftsK|
          Length = 1329

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 19/50 (38%), Positives = 24/50 (48%)
 Frame = +2

Query: 101 SWAAPLASEPASHADEPVGSADVKPARKRKAEGSEPGEANANNHVSDGPE 250
           SWAAP+  EP +    PV S DV PA+   A    PG       ++  PE
Sbjct: 332 SWAAPV--EPVTQTP-PVASVDVPPAQPTVAWQPVPGPQTGEPVIAPAPE 378

>EXOC1_MOUSE (Q8R3S6) Exocyst complex component 1 (Exocyst complex component|
           Sec3)
          Length = 893

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = -2

Query: 536 NIYDPKGFDGASPI-QHSVELTVPNRRIFCR 447
           N++  +G D +S + QHSVELT+PN   F R
Sbjct: 352 NVFVQQGHDQSSTLAQHSVELTLPNHHPFHR 382

>EXOC1_HUMAN (Q9NV70) Exocyst complex component 1 (Exocyst complex component|
           Sec3)
          Length = 893

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = -2

Query: 536 NIYDPKGFDGASPI-QHSVELTVPNRRIFCR 447
           N++  +G D +S + QHSVELT+PN   F R
Sbjct: 352 NVFVQQGHDQSSTLAQHSVELTLPNHHPFHR 382

>CCDC8_RAT (P62521) Probable Coiled-coil domain-containing protein 8|
          Length = 643

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 27/94 (28%), Positives = 38/94 (40%), Gaps = 6/94 (6%)
 Frame = +2

Query: 5   AAXTMSKSALXNASPSDEATTKPLQPVEVNPISWAA------PLASEPASHADEPVGSAD 166
           A  T +  A   A+P  EAT  P     VNP + AA        A+  A  A  P   A 
Sbjct: 372 AEATANPRAEAAANPRAEATANPRAEAAVNPRTEAAVNPRTEAAANPRAEAAVNPRAEAT 431

Query: 167 VKPARKRKAEGSEPGEANANNHVSDGPETKLEGA 268
             P  + +AE ++  EA A+         ++E A
Sbjct: 432 ASP--RAEAEVNQKTEATASPRAETAASPRVEAA 463



 Score = 29.3 bits (64), Expect = 9.3
 Identities = 27/85 (31%), Positives = 33/85 (38%)
 Frame = +2

Query: 20  SKSALXNASPSDEATTKPLQPVEVNPISWAAPLASEPASHADEPVGSADVKPARKRKAEG 199
           S  A   A+P  EAT  P      NP + AA  AS  A  A  P   A   P  + +A  
Sbjct: 321 SPRAEAAANPRAEATANPRAEAAANPRAEAA--ASPRAEAAANPRAEAAANP--RAEATA 376

Query: 200 SEPGEANANNHVSDGPETKLEGAQN 274
           +   EA AN         + E A N
Sbjct: 377 NPRAEAAANPRAEATANPRAEAAVN 401

>VGFR3_MOUSE (P35917) Vascular endothelial growth factor receptor 3 precursor (EC|
            2.7.10.1) (VEGFR-3) (Tyrosine-protein kinase receptor
            FLT4)
          Length = 1363

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +2

Query: 128  PASHADEPVGSADVKPARKRKAEGSEPGEANANNHVSDGPETKLEG 265
            P  H D P G  D +  R+R  +G++ G+   NN   +  +   EG
Sbjct: 1302 PGQHMDIPRGHPDPQGRRRRPTQGAQGGKVFYNNEYGEVSQPCTEG 1347

>MAGL2_HUMAN (Q9UJ55) MAGE-like protein 2 (Necdin-like protein 1) (Protein nM15)|
          Length = 529

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = -1

Query: 480 TYCPKSSDFLSTSKVR-ALVHTYKAITASRYRKKGLPHIMDKEYRDEEIIDVEHWVRQ 310
           T+ P SS F +TS+ + A ++ +K  +A+    K LP+ +   +   E +    WV Q
Sbjct: 62  TFAPSSSVFPATSQFQPASLNAFKGPSAASETPKSLPYALQDPFACVEALPAVPWVPQ 119

>HRDB_STRCO (P18183) RNA polymerase principal sigma factor hrdB|
          Length = 511

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 22/87 (25%), Positives = 36/87 (41%)
 Frame = +2

Query: 20  SKSALXNASPSDEATTKPLQPVEVNPISWAAPLASEPASHADEPVGSADVKPARKRKAEG 199
           ++ ++   SP+    TK +    V      AP A  PA+ A EP    +  PA+K  A+ 
Sbjct: 79  TRKSVAAKSPAKRTATKAVAAKPVTSRKATAPAA--PAAPATEPAAVEEEAPAKKAAAKK 136

Query: 200 SEPGEANANNHVSDGPETKLEGAQNGD 280
           +   +A A    +     K   A+  D
Sbjct: 137 TTAKKATAKKTTAKKAAAKKTTAKKED 163

>FTSK_SHIFL (Q83S00) DNA translocase ftsK|
          Length = 1342

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = +2

Query: 101 SWAAPLASEPASHADEPVGSADVKPARKRKAEGSEPGEANANNHVSDGPE 250
           SWAAP+  EP +    PV S DV P++   A    PG       ++  PE
Sbjct: 332 SWAAPV--EPVTQTP-PVASVDVPPSQPTVAWQPVPGPQTGEPVIAPAPE 378

>FTSK_ECO57 (Q8X5H9) DNA translocase ftsK|
          Length = 1342

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = +2

Query: 101 SWAAPLASEPASHADEPVGSADVKPARKRKAEGSEPGEANANNHVSDGPE 250
           SWAAP+  EP +    PV S DV P++   A    PG       ++  PE
Sbjct: 332 SWAAPV--EPVTQTP-PVASVDVPPSQPTVAWQPVPGPQTGEPVIAPAPE 378

>SUOX_MACFA (Q60HD0) Sulfite oxidase, mitochondrial precursor (EC 1.8.3.1)|
          Length = 488

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 15/54 (27%), Positives = 23/54 (42%)
 Frame = +2

Query: 86  EVNPISWAAPLASEPASHADEPVGSADVKPARKRKAEGSEPGEANANNHVSDGP 247
           E+NP    AP       +AD+PV    +K   +R      P E    N+++  P
Sbjct: 102 ELNPEDKVAPTVETSDPYADDPVRHPALKVNSQRPFNAEPPPELLTENYITPNP 155

>SUOX_HUMAN (P51687) Sulfite oxidase, mitochondrial precursor (EC 1.8.3.1)|
          Length = 488

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 15/54 (27%), Positives = 23/54 (42%)
 Frame = +2

Query: 86  EVNPISWAAPLASEPASHADEPVGSADVKPARKRKAEGSEPGEANANNHVSDGP 247
           E+NP    AP       +AD+PV    +K   +R      P E    N+++  P
Sbjct: 102 ELNPEDKVAPTVETSDPYADDPVRHPALKVNSQRPFNAEPPPELLTENYITPNP 155

>NGK7_SCHPO (Q9USL4) Putative nucleoporin C18B5.07c|
          Length = 565

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
 Frame = +2

Query: 92  NPISWAAPLASEPASHADEPVG---SADVKPARKRKAEGSEPG--EANANNHVSDGPETK 256
           NP S+AAP +S P S     VG   S +     K + E  E G  E  +N+ +  G   K
Sbjct: 389 NPFSFAAPKSSFPTSSTPASVGAEKSEETSNGNKSEQEEKENGNDETRSNDSLVSG---K 445

Query: 257 LEGAQNGD 280
            +G +N D
Sbjct: 446 GKGEENED 453

>GRIN1_MOUSE (Q3UNH4) G protein-regulated inducer of neurite outgrowth 1 (GRIN1)|
          Length = 932

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +2

Query: 119 ASEPASHADEPVGSADVKPARKRKAEGSEPGEANA 223
           AS PAS   +P+ S+    A + KAE   PGE +A
Sbjct: 467 ASLPASEKTDPLASSKAGSASQGKAETVSPGEVDA 501

>ADDA_RAT (Q63028) Alpha-adducin (Erythrocyte adducin alpha subunit)|
          Length = 735

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
 Frame = +2

Query: 38  NASPSDEATTKPLQPVEVNPISWAAPLASEPASHADE---PV-----GSADVKPARKRK 190
           +ASP    TT+PL   +  P S +AP A E AS A E   P+     GS    P++K+K
Sbjct: 663 HASPD---TTQPLAEADPEPASASAPGAEEVASPATEEGSPMDPGSDGSPGKSPSKKKK 718

>TUB8_SOLTU (P33191) Induced stolen tip protein TUB8 (Fragment)|
          Length = 211

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
 Frame = +2

Query: 2   SAAXTMSKSALXNASPSDEATTKPLQ-PVEVNPISWAAPLASEPASHADEPVGSADVKPA 178
           +AA    + A    + +  A  +P+  PVE        P A+E  + A+EPV +A V+ A
Sbjct: 86  AAALVAEEPAAAEPTAAVAAAVEPVAAPVE-------EPAAAEEPAAAEEPVAAAPVEEA 138

Query: 179 RKRKAEG-----SEP--GEANANNHVSDGPE 250
              KAE      SEP   +A   + VS+ PE
Sbjct: 139 AAPKAEPEEAPVSEPEAEKAEEASPVSEEPE 169

>SMA6_CAEEL (Q09488) Serine/threonine-protein kinase sma-6 precursor (EC|
           2.7.11.30)
          Length = 636

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +1

Query: 265 CSEWRCYHHCLKSCSLTYPVLYVDDFLVSIFLVHYMRE 378
           C+ WR  HH  KS    Y   Y +  L+    VH+ +E
Sbjct: 128 CNSWRAAHHSPKSIGCCYEGNYCNKNLIPPAYVHHHKE 165


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,208,659
Number of Sequences: 219361
Number of extensions: 1900534
Number of successful extensions: 5265
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 5011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5249
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5367617986
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)