>Y114_CHLMU (Q9PLI5) Hypothetical protein TC0114|
          Length = 122

 Score =  113 bits (282), Expect = 5e-25
 Identities = 60/90 (66%), Positives = 66/90 (73%), Gaps = 3/90 (3%)
 Frame = -3

Query: 598 LLAVLPL---TPTVDRNRTVSRRSKPNSRTTFIGEQPNPWDLLQPQDVMSRHRGAKRLRR 428
           +L   PL    PT DR++TVSRR +P+SRT  IGEQPNPWDLLQPQD MSRHRGAK  RR
Sbjct: 33  VLGTAPLKYPAPTKDRDQTVSRRFEPSSRTALIGEQPNPWDLLQPQDAMSRHRGAKPPRR 92

Query: 427 *ELLGVISLLSPAYL*SVEREPFHTGLPDH 338
            ELL  ISLLSP YL SV+R  FH   PDH
Sbjct: 93  YELLVAISLLSPEYLLSVKRRRFHFPPPDH 122

>NPFF2_HUMAN (Q9Y5X5) Neuropeptide FF receptor 2 (Neuropeptide G-protein coupled|
           receptor) (G-protein coupled receptor 74) (G-protein
           coupled receptor HLWAR77)
          Length = 522

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
 Frame = +3

Query: 345 GSPVWKGSRSTDQRYAGDNRLM-----TPKSSYRRSR 440
           G P W GS    ++ AGD R +     T KSS+ RSR
Sbjct: 40  GGPAWSGSLEWSRQSAGDRRRLGLSRQTAKSSWSRSR 76

>RECF_SYNJB (Q2JIB8) DNA replication and repair protein recF|
          Length = 380

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 28/96 (29%), Positives = 39/96 (40%), Gaps = 14/96 (14%)
 Frame = -3

Query: 451 RGAKRLRR*ELLGVISLLSPAYL*SVE--------------REPFHTGLPDHYGRLSSLF 314
           RG    RR  L GV+  L PAYL  VE              ++P   G  D + ++    
Sbjct: 126 RGGPEARRNWLDGVLLQLEPAYLGLVEQYRQILRQRNALLKQDPAAAG--DKFSQMDFWD 183

Query: 313 DQSVSQSGRLIPLRSRAESTLEPTFAHLRYSLGGIR 206
            Q  +   R++  R+R    LEP  AH    + G R
Sbjct: 184 AQLATTGSRIMRRRARLLQRLEPLAAHWHRVISGGR 219


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,021,122
Number of Sequences: 219361
Number of extensions: 2205421
Number of successful extensions: 5259
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5256
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5995743495
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)