>B3GN3_HUMAN (Q9Y2A9) UDP-GlcNAc:betaGal|
           beta-1,3-N-acetylglucosaminyltransferase 3 (EC 2.4.1.-)
           (Beta3Gn-T3) (BGnT-3) (Core 1 extending
           beta-1,3-N-acetylglucosaminyltransferase)
           (Core1-beta3GlcNAcT) (Beta-1,3-galactosyltransferase 8)
           (Beta-1,3-GalTase 8)
          Length = 372

 Score = 37.4 bits (85), Expect = 0.036
 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 10/89 (11%)
 Frame = +3

Query: 42  ASRHANQSLRLFKMEDVSMGMWVE----------DYNTTTIAAPVQYIHSWKFCQYGCVD 191
           A R A   L +F ++DV +GM +E             T+ + AP Q++ S+  C Y    
Sbjct: 282 ALRRAAHVLDIFPIDDVFLGMCLELEGLKPASHSGIRTSGVRAPSQHLSSFDPCFYR--- 338

Query: 192 NYFTAHYQSPRQMLCLWDKLSLGRAQCCN 278
           +    H   P +ML +WD L+     C N
Sbjct: 339 DLLLVHRFLPYEMLLMWDALNQPNLTCGN 367

>PSPB_RABIT (P15285) Pulmonary surfactant-associated protein B precursor (SP-B)|
           (6 kDa protein) (Pulmonary surfactant-associated
           proteolipid SPL(Phe))
          Length = 370

 Score = 30.0 bits (66), Expect(2) = 0.18
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +2

Query: 119 QHYHHCRPGAVHPQLEVLPVRLRGQLLHGALP 214
           QH   C+PG+  P L+ LP +L    L GALP
Sbjct: 139 QHLGLCQPGSPEPPLDPLPDKLVLPTLLGALP 170



 Score = 23.9 bits (50), Expect(2) = 0.18
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 322 TDDLTRRHPPVPLP*CHFRRT 384
           T DL+ +  P+PLP C   RT
Sbjct: 177 TQDLSAQRFPIPLPLCWLCRT 197

>B3GT6_MOUSE (Q91Z92) Beta-1,3-galactosyltransferase 6 (EC 2.4.1.134) (Beta|
           3GalT6) (Galactosylxylosylprotein
           3-beta-galactosyltransferase) (UDP-Gal:betaGal beta
           1,3-galactosyltransferase polypeptide 6)
           (Galactosyltransferase II) (GAG GalTII)
          Length = 325

 Score = 34.3 bits (77), Expect = 0.31
 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
 Frame = +3

Query: 48  RHANQSLRLFKMEDVSMGMWVEDYNTTTIAAPVQYIHSWKF-CQY---GCVDNYFTAHYQ 215
           R + + LR +  EDVS+G W+   +       VQ  H  +F  +Y   GC + Y   H Q
Sbjct: 225 RLSREYLRAWHSEDVSLGTWLAPVD-------VQREHDPRFDTEYKSRGCNNQYLVTHKQ 277

Query: 216 SPRQML 233
           SP  ML
Sbjct: 278 SPEDML 283

>SQV2_CAEEL (Q9N491) Beta-1,3-galactosyltransferase sqv-2 (EC 2.4.1.134)|
           (Squashed vulva protein 2)
          Length = 330

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
 Frame = +3

Query: 60  QSLRLFKMEDVSMGMWVEDYNTTTIAAPVQYIHSWKF----CQYGCVDNYFTAHYQSPRQ 227
           Q  R ++ EDVS+G W+   +       V+Y+H  +F       GC + Y   H  + ++
Sbjct: 232 QLFRHYRNEDVSVGAWIGGLD-------VKYVHDPRFDTEWRSRGCNNEYLITHKHTEQE 284

Query: 228 MLCLWDKL 251
           M  +++ L
Sbjct: 285 MQEMFENL 292

>EP400_MOUSE (Q8CHI8) E1A-binding protein p400 (EC 3.6.1.-) (p400 kDa|
            SWI2/SNF2-related protein) (Domino homolog) (mDomino)
          Length = 3072

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
 Frame = +2

Query: 212  PVPQADAV----PLGQTVVRPRAMLQLQMTRRSSMTASRGQPT 328
            PVPQ  A     P GQ  V+P+   Q+Q   +     S+GQPT
Sbjct: 2490 PVPQPQAASSQTPAGQPAVQPQPQPQVQAQPQPVQPQSKGQPT 2532

>RSN_HUMAN (Q9HD89) Resistin precursor (Cysteine-rich secreted protein FIZZ3)|
           (Adipose tissue-specific secretory factor) (ADSF)
           (C/EBP-epsilon-regulated myeloid-specific secreted
           cysteine-rich protein) (Cysteine-rich secreted protein
           A12-alpha-like 2)
          Length = 108

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
 Frame = -3

Query: 282 CSCSIARGLTTVCPRGTASAWGTGSAP*SSCPRSRTGRTSSCGCTAPGRQWW--*CCSLQ 109
           C    +RG    CPRG A    TG    S+C        ++C C   G  W    CC +Q
Sbjct: 51  CQSVTSRGDLATCPRGFAV---TGCTCGSACGSWDVRAETTCHCQCAGMDWTGARCCRVQ 107

>B3GT6_HUMAN (Q96L58) Beta-1,3-galactosyltransferase 6 (EC 2.4.1.134) (beta|
           3GalT6) (Galactosylxylosylprotein
           3-beta-galactosyltransferase) (UDP-Gal:betaGal beta
           1,3-galactosyltransferase polypeptide 6)
           (Galactosyltransferase II) (GAG GalTII)
          Length = 329

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
 Frame = +3

Query: 48  RHANQSLRLFKMEDVSMGMWVEDYNTTTIAAPVQYIHSWKF-CQY---GCVDNYFTAHYQ 215
           R +   LR +  EDVS+G W+   +       VQ  H  +F  +Y   GC + Y   H Q
Sbjct: 229 RLSRDYLRAWHSEDVSLGAWLAPVD-------VQREHDPRFDTEYRSRGCSNQYLVTHKQ 281

Query: 216 SPRQML 233
           S   ML
Sbjct: 282 SLEDML 287

>STP2_PANTR (Q9N1A7) Nuclear transition protein 2 (TP-2) (TP2) (Fragment)|
          Length = 133

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 20/64 (31%), Positives = 24/64 (37%), Gaps = 5/64 (7%)
 Frame = +2

Query: 347 RQSHCRSVILEEHQGPGQHDNHQTARVSIILNSQFPTSAP-----SADGGGDHGPHHCLL 511
           RQSHC S      Q P  H N   A  S    SQ P ++P            H P    +
Sbjct: 38  RQSHCGSRSRSSSQSPASHRNPTGAHSSSGHQSQSPNTSPPPKRHKKTMNSHHSPMRPTI 97

Query: 512 LSCT 523
           L C+
Sbjct: 98  LHCS 101

>FER7_METJA (Q58132) Putative ferredoxin MJ0722|
          Length = 77

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +3

Query: 102 MWVEDYNTTTIAAPVQYIHSWKFCQYGCVDNYFTAHYQSPRQ 227
           +W +D N    A  V+Y H+ KFC   C  N        P++
Sbjct: 28  IWTKDENGKYYAYDVEYCHNCKFCAGRCPTNAILIKVVKPKK 69

>LIPB_MOUSE (Q8VCM4) Lipoyltransferase 1, mitochondrial precursor (EC 6.-.-.-)|
           (Lipoate-protein ligase) (Lipoate biosynthesis protein)
           (Lipoyl ligase)
          Length = 373

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = +2

Query: 398 QHDNHQTARVSIILNSQFPTSAPSADGGGDHGPHHCLLLSCTQTRYAINGA 550
           Q D   T +  ++L+ QF  S  ++  G     HHC LL C+  R A++ +
Sbjct: 143 QLDVQPTKKFDLLLDGQFKISGTASKIGRTAAYHHCTLL-CSTNRTALSSS 192

>SUC4_ARATH (Q9FE59) Sucrose transport protein SUC4 (Sucrose permease 4)|
           (Sucrose-proton symporter 4) (Sucrose transporter 4)
          Length = 510

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 29/96 (30%), Positives = 38/96 (39%), Gaps = 7/96 (7%)
 Frame = +1

Query: 319 ATDDLTRRH------PPVPLP*CHFRRTPGTRPA*QPPDRPGVHHP*LTVPYI-CSIG*R 477
           AT D  RRH      PP+  P      T  +RP   PP         L V  + C I   
Sbjct: 2   ATSDQDRRHRVTRNRPPIARP-----STSSSRPVVSPPRSKVSKRVLLRVASVACGI--- 53

Query: 478 RRRPWTSPLSAPQLYTNKIRHQWCFTSWSSYIWICG 585
            +  W   LS   L T  ++      +W+S IW+CG
Sbjct: 54  -QFGWALQLS---LLTPYVQELGIPHAWASVIWLCG 85

>B3GN3_MOUSE (Q5JCS9) UDP-GlcNAc:betaGal|
           beta-1,3-N-acetylglucosaminyltransferase 3 (EC 2.4.1.-)
           (Beta3Gn-T3) (BGnT-3) (Core 1 extending
           beta-1,3-N-acetylglucosaminyltransferase)
           (Core1-beta3GlcNAcT)
          Length = 372

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 10/87 (11%)
 Frame = +3

Query: 42  ASRHANQSLRLFKMEDVSMGMWVED----------YNTTTIAAPVQYIHSWKFCQYGCVD 191
           A R A + L +F ++DV +GM ++             T  +  P   + S+  C Y    
Sbjct: 282 ALRRAARVLPMFPIDDVFLGMCLQQQGLAPGTHSGVRTAGVFPPSPRVSSFDPCFY---R 338

Query: 192 NYFTAHYQSPRQMLCLWDKLSLGRAQC 272
           +    H   P +ML +WD L+  +  C
Sbjct: 339 DLLLVHRFLPFEMLLMWDALNQPQLLC 365

>AFF1_MOUSE (O88573) AF4/FMR2 family member 1 (AF-4 protein) (Proto-oncogene|
           AF4)
          Length = 1217

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
 Frame = +2

Query: 440 NSQFPTSAPSA-----DGGGDHGPHHCLLLSCTQTR 532
           +S  P+ APSA     D  GD  P H  L+S TQ++
Sbjct: 676 SSTAPSKAPSAPQPPKDSAGDRNPEHSALVSLTQSQ 711


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,838,467
Number of Sequences: 219361
Number of extensions: 2198183
Number of successful extensions: 4974
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4967
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5710231900
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)