ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags9m05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AF244674.1|AF244674 Zea mays glutathione S-transferase GST 9 ... 295 5e-77
2gb|AY111697.1| Zea mays CL1117_-1 mRNA sequence 295 5e-77
3ref|XM_470192.1| Oryza sativa (japonica cultivar-group), predic... 230 3e-57
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 196 4e-47
5gb|AC099399.2| Oryza sativa (japonica cultivar-group) chromosome... 196 4e-47
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 196 4e-47
7ref|XM_470191.1| Oryza sativa (japonica cultivar-group), predic... 133 5e-28
8gb|AY533123.1| Oryza sativa (japonica cultivar-group) glutathion... 133 5e-28
9dbj|AK059955.1| Oryza sativa (japonica cultivar-group) cDNA clon... 133 5e-28
10dbj|AK059226.1| Oryza sativa (japonica cultivar-group) cDNA clon... 103 4e-19
11gb|AF244677.1|AF244677 Zea mays glutathione S-transferase GST 12... 98 3e-17
12gb|AY103863.1| Zea mays PCO132785 mRNA sequence 98 3e-17
13gb|AF244678.1|AF244678 Zea mays glutathione S-transferase GST 13... 82 2e-12
14gb|AC125371.4| Mus musculus BAC clone RP24-401O6 from 16, comple... 44 0.34
15gb|AC159629.2| Mus musculus BAC clone RP24-178C15 from chromosom... 42 1.3
16emb|CT572991.10| Mouse DNA sequence from clone RP24-434I23 on ch... 42 1.3
17emb|AL365215.23| Human DNA sequence from clone RP11-416D8 on chr... 40 5.3
18gb|AC159655.8| Mus musculus 6 BAC RP24-559F15 (Roswell Park Canc... 40 5.3
19dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, compl... 40 5.3
20gb|AC093116.2| Homo sapiens chromosome 3 clone RP11-370K13, comp... 40 5.3
21emb|Y07752.1|VCPHEROPH V.carteri mRNA for pherophorin-S 40 5.3
22dbj|AP006309.1| Homo sapiens genomic DNA, chromosome 3 clone:RP1... 40 5.3
23emb|AL732392.8| Mouse DNA sequence from clone RP23-171G10 on chr... 40 5.3
24dbj|AP000498.1| Homo sapiens genomic DNA, chromosome 3p21.3, clo... 40 5.3
25dbj|AB026898.1| Homo sapiens DNA, DLEC1 to ORCTL4 gene region, s... 40 5.3

>gb|AF244674.1|AF244674 Zea mays glutathione S-transferase GST 9 mRNA, complete cds
          Length = 999

 Score =  295 bits (149), Expect = 5e-77
 Identities = 311/365 (85%)
 Strand = Plus / Plus

                                                                       
Query: 2   atggcatcaggcttgcaagtgtttggccagccagcatctaccgatgttgccagggttctg 61
           |||||| ||||| ||||||||||||||||||| || ||||| ||||||||||||||||||
Sbjct: 70  atggcagcaggcctgcaagtgtttggccagccggcgtctactgatgttgccagggttctg 129

                                                                       
Query: 62  acatgcctctttgagaagaatttggagttcgatcttgtccgcattgacacattcaagagg 121
           || ||||| ||||||||||| |||||||| || |||||||||||||| ||||| ||||  
Sbjct: 130 acgtgcctgtttgagaagaaattggagtttgagcttgtccgcattgatacatttaagaca 189

                                                                       
Query: 122 gagcacaggcttcctgagttcattaggctgcgggatccaagtggacaagtgacattcaag 181
            | |||||||||||||||||||| |||||||||||||| | ||| |||||||| ||||||
Sbjct: 190 catcacaggcttcctgagttcatcaggctgcgggatccgaatgggcaagtgaccttcaag 249

                                                                       
Query: 182 catggtgacaagactcttgttgatccaagggctatttgccggtacctctgtacccagttc 241
           ||||| ||||| || ||||||||| ||||||  || ||||||||| | || | |||||| 
Sbjct: 250 catggcgacaaaacccttgttgattcaagggacatatgccggtacgtttgcaaccagttt 309

                                                                       
Query: 242 ccaaaccagggaaacaggaacctctatgggactggttctctggaacgggcctcaatagaa 301
           |||||  | ||||||| || |||||||||  ||||| |||| |||||||| || ||||||
Sbjct: 310 ccaaattacggaaacaagagcctctatggatctggtgctctagaacgggcatcgatagaa 369

                                                                       
Query: 302 cagtggctgcaagcagaggctcagaacttcaaccctcccagctcggccctcgtgtttcag 361
           |||||||| || ||||| || ||||||||   |||||||||||| || || |||||||||
Sbjct: 370 cagtggctccaggcagaagcccagaactttggccctcccagctctgcgcttgtgtttcag 429

                
Query: 362 ctggc 366
           |||||
Sbjct: 430 ctggc 434



to top

>gb|AY111697.1| Zea mays CL1117_-1 mRNA sequence
          Length = 977

 Score =  295 bits (149), Expect = 5e-77
 Identities = 311/365 (85%)
 Strand = Plus / Plus

                                                                       
Query: 2   atggcatcaggcttgcaagtgtttggccagccagcatctaccgatgttgccagggttctg 61
           |||||| ||||| ||||||||||||||||||| || ||||| ||||||||||||||||||
Sbjct: 70  atggcagcaggcctgcaagtgtttggccagccggcgtctactgatgttgccagggttctg 129

                                                                       
Query: 62  acatgcctctttgagaagaatttggagttcgatcttgtccgcattgacacattcaagagg 121
           || ||||| ||||||||||| |||||||| || |||||||||||||| ||||| ||||  
Sbjct: 130 acgtgcctgtttgagaagaaattggagtttgagcttgtccgcattgatacatttaagaca 189

                                                                       
Query: 122 gagcacaggcttcctgagttcattaggctgcgggatccaagtggacaagtgacattcaag 181
            | |||||||||||||||||||| |||||||||||||| | ||| |||||||| ||||||
Sbjct: 190 catcacaggcttcctgagttcatcaggctgcgggatccgaatgggcaagtgaccttcaag 249

                                                                       
Query: 182 catggtgacaagactcttgttgatccaagggctatttgccggtacctctgtacccagttc 241
           ||||| ||||| || ||||||||| ||||||  || ||||||||| | || | |||||| 
Sbjct: 250 catggcgacaaaacccttgttgattcaagggacatatgccggtacgtttgcaaccagttt 309

                                                                       
Query: 242 ccaaaccagggaaacaggaacctctatgggactggttctctggaacgggcctcaatagaa 301
           |||||  | ||||||| || |||||||||  ||||| |||| |||||||| || ||||||
Sbjct: 310 ccaaattacggaaacaagagcctctatggatctggtgctctagaacgggcatcgatagaa 369

                                                                       
Query: 302 cagtggctgcaagcagaggctcagaacttcaaccctcccagctcggccctcgtgtttcag 361
           |||||||| || ||||| || ||||||||   |||||||||||| || || |||||||||
Sbjct: 370 cagtggctccaggcagaagcccagaactttggccctcccagctctgcgcttgtgtttcag 429

                
Query: 362 ctggc 366
           |||||
Sbjct: 430 ctggc 434



to top

>ref|XM_470192.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 531

 Score =  230 bits (116), Expect = 3e-57
 Identities = 167/184 (90%)
 Strand = Plus / Plus

                                                                       
Query: 9   caggcttgcaagtgtttggccagccagcatctaccgatgttgccagggttctgacatgcc 68
           |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 8   caggcttgcaagtgtttggccagccagcatctactgatgttgccagggtcctgacatgcc 67

                                                                       
Query: 69  tctttgagaagaatttggagttcgatcttgtccgcattgacacattcaagagggagcaca 128
           ||||||||||| || |||| || || |||||| ||||||| ||||||||||| |||||||
Sbjct: 68  tctttgagaaggatctggaatttgaacttgtctgcattgatacattcaagagagagcaca 127

                                                                       
Query: 129 ggcttcctgagttcattaggctgcgggatccaagtggacaagtgacattcaagcatggtg 188
            ||||||||||||||||| |||||||||||| | ||| ||||||||||| || |||||||
Sbjct: 128 agcttcctgagttcattaagctgcgggatcctaatgggcaagtgacatttaaacatggtg 187

               
Query: 189 acaa 192
           ||||
Sbjct: 188 acaa 191



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  196 bits (99), Expect = 4e-47
 Identities = 135/147 (91%)
 Strand = Plus / Minus

                                                                           
Query: 9       caggcttgcaagtgtttggccagccagcatctaccgatgttgccagggttctgacatgcc 68
               |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 1933835 caggcttgcaagtgtttggccagccagcatctactgatgttgccagggtcctgacatgcc 1933776

                                                                           
Query: 69      tctttgagaagaatttggagttcgatcttgtccgcattgacacattcaagagggagcaca 128
               ||||||||||| || |||| || || |||||| ||||||| ||||||||||| |||||||
Sbjct: 1933775 tctttgagaaggatctggaatttgaacttgtctgcattgatacattcaagagagagcaca 1933716

                                          
Query: 129     ggcttcctgagttcattaggctgcggg 155
                ||||||||||||||||| ||||||||
Sbjct: 1933715 agcttcctgagttcattaagctgcggg 1933689



 Score =  117 bits (59), Expect = 3e-23
 Identities = 142/169 (84%), Gaps = 3/169 (1%)
 Strand = Plus / Minus

                                                                           
Query: 207     caagggctatttgccggtacctctgtacccagttcccaaaccagggaaacaggaacctct 266
               |||||||||| ||||||||| | ||||| ||||| ||| |   |||||| | || ||| |
Sbjct: 1933457 caagggctatatgccggtacgtttgtactcagtttccaga---gggaaataagacccttt 1933401

                                                                           
Query: 267     atgggactggttctctggaacgggcctcaatagaacagtggctgcaagcagaggctcaga 326
               |||| || || ||||| |||||||| ||||||||||||||||| |||||||| ||||| |
Sbjct: 1933400 atggaacgggatctctagaacgggcatcaatagaacagtggcttcaagcagaagctcaaa 1933341

                                                                
Query: 327     acttcaaccctcccagctcggccctcgtgtttcagctggcatttgctcc 375
               | |||| ||||||||||||||||||||| || || || |||||||||||
Sbjct: 1933340 atttcagccctcccagctcggccctcgtcttccatctcgcatttgctcc 1933292



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                 
Query: 170     gtgacattcaagcatggtgacaagactcttgttg 203
               ||||| ||||||||||| ||||||||||||||||
Sbjct: 1929601 gtgactttcaagcatggcgacaagactcttgttg 1929568



to top

>gb|AC099399.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1006F06,
             complete sequence
          Length = 122218

 Score =  196 bits (99), Expect = 4e-47
 Identities = 135/147 (91%)
 Strand = Plus / Plus

                                                                         
Query: 9     caggcttgcaagtgtttggccagccagcatctaccgatgttgccagggttctgacatgcc 68
             |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 41576 caggcttgcaagtgtttggccagccagcatctactgatgttgccagggtcctgacatgcc 41635

                                                                         
Query: 69    tctttgagaagaatttggagttcgatcttgtccgcattgacacattcaagagggagcaca 128
             ||||||||||| || |||| || || |||||| ||||||| ||||||||||| |||||||
Sbjct: 41636 tctttgagaaggatctggaatttgaacttgtctgcattgatacattcaagagagagcaca 41695

                                        
Query: 129   ggcttcctgagttcattaggctgcggg 155
              ||||||||||||||||| ||||||||
Sbjct: 41696 agcttcctgagttcattaagctgcggg 41722



 Score =  117 bits (59), Expect = 3e-23
 Identities = 142/169 (84%), Gaps = 3/169 (1%)
 Strand = Plus / Plus

                                                                         
Query: 207   caagggctatttgccggtacctctgtacccagttcccaaaccagggaaacaggaacctct 266
             |||||||||| ||||||||| | ||||| ||||| ||| |   |||||| | || ||| |
Sbjct: 41954 caagggctatatgccggtacgtttgtactcagtttccaga---gggaaataagacccttt 42010

                                                                         
Query: 267   atgggactggttctctggaacgggcctcaatagaacagtggctgcaagcagaggctcaga 326
             |||| || || ||||| |||||||| ||||||||||||||||| |||||||| ||||| |
Sbjct: 42011 atggaacgggatctctagaacgggcatcaatagaacagtggcttcaagcagaagctcaaa 42070

                                                              
Query: 327   acttcaaccctcccagctcggccctcgtgtttcagctggcatttgctcc 375
             | |||| ||||||||||||||||||||| || || || |||||||||||
Sbjct: 42071 atttcagccctcccagctcggccctcgtcttccatctcgcatttgctcc 42119



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                               
Query: 170   gtgacattcaagcatggtgacaagactcttgttg 203
             ||||| ||||||||||| ||||||||||||||||
Sbjct: 45810 gtgactttcaagcatggcgacaagactcttgttg 45843



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  196 bits (99), Expect = 4e-47
 Identities = 135/147 (91%)
 Strand = Plus / Minus

                                                                           
Query: 9       caggcttgcaagtgtttggccagccagcatctaccgatgttgccagggttctgacatgcc 68
               |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 1933833 caggcttgcaagtgtttggccagccagcatctactgatgttgccagggtcctgacatgcc 1933774

                                                                           
Query: 69      tctttgagaagaatttggagttcgatcttgtccgcattgacacattcaagagggagcaca 128
               ||||||||||| || |||| || || |||||| ||||||| ||||||||||| |||||||
Sbjct: 1933773 tctttgagaaggatctggaatttgaacttgtctgcattgatacattcaagagagagcaca 1933714

                                          
Query: 129     ggcttcctgagttcattaggctgcggg 155
                ||||||||||||||||| ||||||||
Sbjct: 1933713 agcttcctgagttcattaagctgcggg 1933687



 Score =  117 bits (59), Expect = 3e-23
 Identities = 142/169 (84%), Gaps = 3/169 (1%)
 Strand = Plus / Minus

                                                                           
Query: 207     caagggctatttgccggtacctctgtacccagttcccaaaccagggaaacaggaacctct 266
               |||||||||| ||||||||| | ||||| ||||| ||| |   |||||| | || ||| |
Sbjct: 1933455 caagggctatatgccggtacgtttgtactcagtttccaga---gggaaataagacccttt 1933399

                                                                           
Query: 267     atgggactggttctctggaacgggcctcaatagaacagtggctgcaagcagaggctcaga 326
               |||| || || ||||| |||||||| ||||||||||||||||| |||||||| ||||| |
Sbjct: 1933398 atggaacgggatctctagaacgggcatcaatagaacagtggcttcaagcagaagctcaaa 1933339

                                                                
Query: 327     acttcaaccctcccagctcggccctcgtgtttcagctggcatttgctcc 375
               | |||| ||||||||||||||||||||| || || || |||||||||||
Sbjct: 1933338 atttcagccctcccagctcggccctcgtcttccatctcgcatttgctcc 1933290



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                 
Query: 170     gtgacattcaagcatggtgacaagactcttgttg 203
               ||||| ||||||||||| ||||||||||||||||
Sbjct: 1929599 gtgactttcaagcatggcgacaagactcttgttg 1929566



to top

>ref|XM_470191.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 678

 Score =  133 bits (67), Expect = 5e-28
 Identities = 259/323 (80%)
 Strand = Plus / Plus

                                                                       
Query: 9   caggcttgcaagtgtttggccagccagcatctaccgatgttgccagggttctgacatgcc 68
           |||| ||||| ||||| |||||||| || || ||||| || || ||||| ||||| || |
Sbjct: 8   caggattgcaggtgttcggccagccggcgtccaccgacgtcgcgagggtcctgacctgtc 67

                                                                       
Query: 69  tctttgagaagaatttggagttcgatcttgtccgcattgacacattcaagagggagcaca 128
           |||| ||||||||  | |||||||| ||  ||||||| ||||| ||||||| ||||||||
Sbjct: 68  tcttcgagaagaacctcgagttcgagctcatccgcatagacaccttcaagaaggagcaca 127

                                                                       
Query: 129 ggcttcctgagttcattaggctgcgggatccaagtggacaagtgacattcaagcatggtg 188
            ||| || |||||||| | ||| |||||||| |  || || ||||| ||||||||||| |
Sbjct: 128 agctccccgagttcatcaagctacgggatccgaccgggcaggtgactttcaagcatggcg 187

                                                                       
Query: 189 acaagactcttgttgatccaagggctatttgccggtacctctgtacccagttcccaaacc 248
           ||||||||||||||||| |||| || || ||||| |||||  | || ||||||||| || 
Sbjct: 188 acaagactcttgttgattcaagagcgatatgccgatacctgagcactcagttcccagacg 247

                                                                       
Query: 249 agggaaacaggaacctctatgggactggttctctggaacgggcctcaatagaacagtggc 308
           | || |||||||   |||| ||||| || || ||||| ||||| || || || |||||||
Sbjct: 248 acgggaacaggacgatctacgggacggggtcgctggagcgggcgtcgatcgagcagtggc 307

                                  
Query: 309 tgcaagcagaggctcagaacttc 331
           |||| || ||||| |||| ||||
Sbjct: 308 tgcaggcggaggcgcagagcttc 330



to top

>gb|AY533123.1| Oryza sativa (japonica cultivar-group) glutathione S-transferase
           GSTF15 mRNA, complete cds
          Length = 678

 Score =  133 bits (67), Expect = 5e-28
 Identities = 259/323 (80%)
 Strand = Plus / Plus

                                                                       
Query: 9   caggcttgcaagtgtttggccagccagcatctaccgatgttgccagggttctgacatgcc 68
           |||| ||||| ||||| |||||||| || || ||||| || || ||||| ||||| || |
Sbjct: 8   caggattgcaggtgttcggccagccggcgtccaccgacgtcgcgagggtcctgacctgtc 67

                                                                       
Query: 69  tctttgagaagaatttggagttcgatcttgtccgcattgacacattcaagagggagcaca 128
           |||| ||||||||  | |||||||| ||  ||||||| ||||| ||||||| ||||||||
Sbjct: 68  tcttcgagaagaacctcgagttcgagctcatccgcatagacaccttcaagaaggagcaca 127

                                                                       
Query: 129 ggcttcctgagttcattaggctgcgggatccaagtggacaagtgacattcaagcatggtg 188
            ||| || |||||||| | ||| |||||||| |  || || ||||| ||||||||||| |
Sbjct: 128 agctccccgagttcatcaagctacgggatccgaccgggcaggtgactttcaagcatggcg 187

                                                                       
Query: 189 acaagactcttgttgatccaagggctatttgccggtacctctgtacccagttcccaaacc 248
           ||||||||||||||||| |||| || || ||||| |||||  | || ||||||||| || 
Sbjct: 188 acaagactcttgttgattcaagagcgatatgccgatacctgagcactcagttcccagacg 247

                                                                       
Query: 249 agggaaacaggaacctctatgggactggttctctggaacgggcctcaatagaacagtggc 308
           | || |||||||   |||| ||||| || || ||||| ||||| || || || |||||||
Sbjct: 248 acgggaacaggacgatctacgggacggggtcgctggagcgggcgtcgatcgagcagtggc 307

                                  
Query: 309 tgcaagcagaggctcagaacttc 331
           |||| || ||||| |||| ||||
Sbjct: 308 tgcaggcggaggcgcagagcttc 330



to top

>dbj|AK059955.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-D02, full
           insert sequence
          Length = 951

 Score =  133 bits (67), Expect = 5e-28
 Identities = 259/323 (80%)
 Strand = Plus / Plus

                                                                       
Query: 9   caggcttgcaagtgtttggccagccagcatctaccgatgttgccagggttctgacatgcc 68
           |||| ||||| ||||| |||||||| || || ||||| || || ||||| ||||| || |
Sbjct: 116 caggattgcaggtgttcggccagccggcgtccaccgacgtcgcgagggtcctgacctgtc 175

                                                                       
Query: 69  tctttgagaagaatttggagttcgatcttgtccgcattgacacattcaagagggagcaca 128
           |||| ||||||||  | |||||||| ||  ||||||| ||||| ||||||| ||||||||
Sbjct: 176 tcttcgagaagaacctcgagttcgagctcatccgcatagacaccttcaagaaggagcaca 235

                                                                       
Query: 129 ggcttcctgagttcattaggctgcgggatccaagtggacaagtgacattcaagcatggtg 188
            ||| || |||||||| | ||| |||||||| |  || || ||||| ||||||||||| |
Sbjct: 236 agctccccgagttcatcaagctacgggatccgaccgggcaggtgactttcaagcatggcg 295

                                                                       
Query: 189 acaagactcttgttgatccaagggctatttgccggtacctctgtacccagttcccaaacc 248
           ||||||||||||||||| |||| || || ||||| |||||  | || ||||||||| || 
Sbjct: 296 acaagactcttgttgattcaagagcgatatgccgatacctgagcactcagttcccagacg 355

                                                                       
Query: 249 agggaaacaggaacctctatgggactggttctctggaacgggcctcaatagaacagtggc 308
           | || |||||||   |||| ||||| || || ||||| ||||| || || || |||||||
Sbjct: 356 acgggaacaggacgatctacgggacggggtcgctggagcgggcgtcgatcgagcagtggc 415

                                  
Query: 309 tgcaagcagaggctcagaacttc 331
           |||| || ||||| |||| ||||
Sbjct: 416 tgcaggcggaggcgcagagcttc 438



to top

>dbj|AK059226.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-D08, full
           insert sequence
          Length = 631

 Score =  103 bits (52), Expect = 4e-19
 Identities = 82/92 (89%)
 Strand = Plus / Plus

                                                                       
Query: 284 gaacgggcctcaatagaacagtggctgcaagcagaggctcagaacttcaaccctcccagc 343
           |||||||| ||||||||||||||||| |||||||| ||||| || |||| ||||||||||
Sbjct: 1   gaacgggcatcaatagaacagtggcttcaagcagaagctcaaaatttcagccctcccagc 60

                                           
Query: 344 tcggccctcgtgtttcagctggcatttgctcc 375
           ||||||||||| || || || |||||||||||
Sbjct: 61  tcggccctcgtcttccatctcgcatttgctcc 92



to top

>gb|AF244677.1|AF244677 Zea mays glutathione S-transferase GST 12 mRNA, complete cds
          Length = 1198

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 184/229 (80%)
 Strand = Plus / Plus

                                                                       
Query: 15  tgcaagtgtttggccagccagcatctaccgatgttgccagggttctgacatgcctctttg 74
           |||| ||||| || ||||| || || ||||| || |||||||| ||||| |||||||| |
Sbjct: 117 tgcaggtgttcggacagccggcttccaccgacgtcgccagggtgctgacctgcctcttcg 176

                                                                       
Query: 75  agaagaatttggagttcgatcttgtccgcattgacacattcaagagggagcacaggcttc 134
           |||||||  | |||||||| || |||||||  ||||| ||||||| |  ||||| ||| |
Sbjct: 177 agaagaacctcgagttcgagctcgtccgcaccgacaccttcaagaagtcgcacaagctcc 236

                                                                       
Query: 135 ctgagttcattaggctgcgggatccaagtggacaagtgacattcaagcatggtgacaaga 194
           | |||||||| | |||| ||||||| |  || || ||||| |||||||| ||||||||||
Sbjct: 237 ccgagttcatcaagctgagggatcctaccgggcaggtgactttcaagcacggtgacaaga 296

                                                            
Query: 195 ctcttgttgatccaagggctatttgccggtacctctgtacccagttccc 243
           |  | |||||| | ||| |||| ||||||||||| || || ||||||||
Sbjct: 297 caatcgttgattccaggactatctgccggtacctgtgcacgcagttccc 345



to top

>gb|AY103863.1| Zea mays PCO132785 mRNA sequence
          Length = 959

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 184/229 (80%)
 Strand = Plus / Plus

                                                                       
Query: 15  tgcaagtgtttggccagccagcatctaccgatgttgccagggttctgacatgcctctttg 74
           |||| ||||| || ||||| || || ||||| || |||||||| ||||| |||||||| |
Sbjct: 140 tgcaggtgttcggacagccggcttccaccgacgtcgccagggtgctgacctgcctcttcg 199

                                                                       
Query: 75  agaagaatttggagttcgatcttgtccgcattgacacattcaagagggagcacaggcttc 134
           |||||||  | |||||||| || |||||||  ||||| ||||||| |  ||||| ||| |
Sbjct: 200 agaagaacctcgagttcgagctcgtccgcaccgacaccttcaagaagtcgcacaagctcc 259

                                                                       
Query: 135 ctgagttcattaggctgcgggatccaagtggacaagtgacattcaagcatggtgacaaga 194
           | |||||||| | |||| ||||||| |  || || ||||| |||||||| ||||||||||
Sbjct: 260 ccgagttcatcaagctgagggatcctaccgggcaggtgactttcaagcacggtgacaaga 319

                                                            
Query: 195 ctcttgttgatccaagggctatttgccggtacctctgtacccagttccc 243
           |  | |||||| | ||| |||| ||||||||||| || || ||||||||
Sbjct: 320 caatcgttgattccaggactatctgccggtacctgtgcacgcagttccc 368



to top

>gb|AF244678.1|AF244678 Zea mays glutathione S-transferase GST 13 mRNA, complete cds
          Length = 1134

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 248/317 (78%)
 Strand = Plus / Plus

                                                                       
Query: 15  tgcaagtgtttggccagccagcatctaccgatgttgccagggttctgacatgcctctttg 74
           |||| ||||| || ||||| || || ||||| || || ||||| ||||| |||||||| |
Sbjct: 74  tgcaggtgttcggacagccggcgtccaccgacgtcgcgagggtgctgacctgcctcttcg 133

                                                                       
Query: 75  agaagaatttggagttcgatcttgtccgcattgacacattcaagagggagcacaggcttc 134
           |||||||  | |||||||| ||  ||||||  ||||| ||||||| |   |||| ||| |
Sbjct: 134 agaagaacctcgagttcgagctcatccgcaccgacaccttcaagaagtcccacaagctcc 193

                                                                       
Query: 135 ctgagttcattaggctgcgggatccaagtggacaagtgacattcaagcatggtgacaaga 194
           | |||||||| | |||  ||||||| | ||| || ||||| |||||||| |||||||| |
Sbjct: 194 ccgagttcatcaagctaagggatcctactgggcaggtgactttcaagcacggtgacaaaa 253

                                                                       
Query: 195 ctcttgttgatccaagggctatttgccggtacctctgtacccagttcccaaaccagggaa 254
           |  | |||||| | ||||| |||||||||||||| || || ||||||||  || | ||  
Sbjct: 254 caatcgttgattccagggccatttgccggtacctgtgcacgcagttcccggacgacgggt 313

                                                                       
Query: 255 acaggaacctctatgggactggttctctggaacgggcctcaatagaacagtggctgcaag 314
           ||| ||| || || ||||| || || ||||| ||||| || ||||| ||||||||||| |
Sbjct: 314 acaagaagctgtacgggacggggtcgctggagcgggcgtccatagagcagtggctgcagg 373

                            
Query: 315 cagaggctcagaacttc 331
           | ||||| |||| ||||
Sbjct: 374 cggaggcccagagcttc 390



to top

>gb|AC125371.4| Mus musculus BAC clone RP24-401O6 from 16, complete sequence
          Length = 194685

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 125    cacaggcttcctgagttcattaggct 150
              |||||| |||||||||||||||||||
Sbjct: 125461 cacagggttcctgagttcattaggct 125486



to top

>gb|AC159629.2| Mus musculus BAC clone RP24-178C15 from chromosome 12, complete
             sequence
          Length = 138643

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 119   agggagcacaggcttcctgag 139
             |||||||||||||||||||||
Sbjct: 69057 agggagcacaggcttcctgag 69037



to top

>emb|CT572991.10| Mouse DNA sequence from clone RP24-434I23 on chromosome 12, complete
             sequence
          Length = 101591

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 119   agggagcacaggcttcctgag 139
             |||||||||||||||||||||
Sbjct: 80698 agggagcacaggcttcctgag 80718



to top

>emb|AL365215.23| Human DNA sequence from clone RP11-416D8 on chromosome 10 Contains the
             5' end of the RSU1 gene for Ras suppressor protein 1, the
             3' end of the CUBN gene for cubilin (intrinsic
             factor-cobalamin receptor) and a CpG island, complete
             sequence
          Length = 184703

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 245   aaccagggaaacaggaacct 264
             ||||||||||||||||||||
Sbjct: 74659 aaccagggaaacaggaacct 74640



to top

>gb|AC159655.8| Mus musculus 6 BAC RP24-559F15 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 200889

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   aacagtggctgcaagcagag 319
             ||||||||||||||||||||
Sbjct: 84430 aacagtggctgcaagcagag 84411



to top

>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence
          Length = 3354505

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 19      agtgtttggccagccagcat 38
               ||||||||||||||||||||
Sbjct: 3117821 agtgtttggccagccagcat 3117840



to top

>gb|AC093116.2| Homo sapiens chromosome 3 clone RP11-370K13, complete sequence
          Length = 182224

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 51     ccagggttctgacatgcctc 70
              ||||||||||||||||||||
Sbjct: 168880 ccagggttctgacatgcctc 168899



to top

>emb|Y07752.1|VCPHEROPH V.carteri mRNA for pherophorin-S
          Length = 1800

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 314  gcagaggctcagaacttcaa 333
            ||||||||||||||||||||
Sbjct: 1141 gcagaggctcagaacttcaa 1160



to top

>dbj|AP006309.1| Homo sapiens genomic DNA, chromosome 3 clone:RP11-39I4, complete sequence
          Length = 168211

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 51     ccagggttctgacatgcctc 70
              ||||||||||||||||||||
Sbjct: 111385 ccagggttctgacatgcctc 111366



to top

>emb|AL732392.8| Mouse DNA sequence from clone RP23-171G10 on chromosome X, complete
             sequence
          Length = 188116

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 235   ccagttcccaaaccagggaa 254
             ||||||||||||||||||||
Sbjct: 59676 ccagttcccaaaccagggaa 59695



to top

>dbj|AP000498.1| Homo sapiens genomic DNA, chromosome 3p21.3, clone:603 to 320,
             anti-oncogene region, section 1/3
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    ccagggttctgacatgcctc 70
             ||||||||||||||||||||
Sbjct: 45990 ccagggttctgacatgcctc 45971



to top

>dbj|AB026898.1| Homo sapiens DNA, DLEC1 to ORCTL4 gene region, section 1/2 (DLEC1,
             ORCTL3, ORCTL4 genes, complete cds)
          Length = 270000

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    ccagggttctgacatgcctc 70
             ||||||||||||||||||||
Sbjct: 78642 ccagggttctgacatgcctc 78623


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,402,178
Number of Sequences: 3902068
Number of extensions: 3402178
Number of successful extensions: 58228
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58142
Number of HSP's gapped (non-prelim): 85
length of query: 393
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 371
effective length of database: 17,147,199,772
effective search space: 6361611115412
effective search space used: 6361611115412
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top