Clone Name | bags9m03 |
---|---|
Clone Library Name | barley_pub |
>SC24C_ARATH (Q9M291) Protein transport protein Sec24-like CEF| Length = 1097 Score = 245 bits (625), Expect = 9e-65 Identities = 115/206 (55%), Positives = 149/206 (72%) Frame = +2 Query: 26 RGFKFKXYSGNFCKRVPTDIDLPAIDSDKTIMVTFKHDDKFQENTECGFQCALLYTTVYG 205 +G + + YSGNFCKR+PTDIDLPAID DK IMVT KHDDK Q+ ECGFQCALLYTT+ G Sbjct: 762 QGIQVQEYSGNFCKRIPTDIDLPAIDCDKAIMVTLKHDDKLQDGAECGFQCALLYTTISG 821 Query: 206 QRRIRVINISLPCTSTLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVRDQVTSTCINI 385 +RRIRV+N+S+PCT+ L+NLFR ADL++QF ++KQA IPS +L V++Q T+ CI I Sbjct: 822 ERRIRVLNLSIPCTNMLSNLFRSADLDSQFACMLKQAANEIPSKALPLVKEQATNDCITI 881 Query: 386 LQAYRKHCASVSSSGQXXXXXXXXXXXXXXXXXVKSIGLRNDGRVDDRSYWXXXXXXXXX 565 L +YRK CA+V+S+GQ K +GLR DGR+DDRS+W Sbjct: 882 LHSYRKFCATVTSTGQLILPEALKLLPLYTLALTKGVGLRMDGRIDDRSFWINHVSSLST 941 Query: 566 LLAIPLVFPRMIALHDLTSRDDEDSL 643 LAIPLV+PRMIA+HDL + D+E+++ Sbjct: 942 PLAIPLVYPRMIAVHDLDANDNEENV 967
>SC24B_ARATH (Q9M081) Putative protein transport protein Sec24-like At4g32640| Length = 1069 Score = 218 bits (555), Expect = 1e-56 Identities = 108/206 (52%), Positives = 137/206 (66%) Frame = +2 Query: 26 RGFKFKXYSGNFCKRVPTDIDLPAIDSDKTIMVTFKHDDKFQENTECGFQCALLYTTVYG 205 +G + + YSGNFCKR+PTDIDLPA HDDK Q+ EC FQCALLYTT+YG Sbjct: 758 QGIQVQEYSGNFCKRIPTDIDLPA------------HDDKLQDGAECAFQCALLYTTIYG 805 Query: 206 QRRIRVINISLPCTSTLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVRDQVTSTCINI 385 +RRIRV +SL CT+ L+NLFR ADL++QF ++KQA IPS +L V++Q T++CIN Sbjct: 806 ERRIRVTTLSLSCTNMLSNLFRAADLDSQFACMLKQAANEIPSKALPLVKEQATNSCINA 865 Query: 386 LQAYRKHCASVSSSGQXXXXXXXXXXXXXXXXXVKSIGLRNDGRVDDRSYWXXXXXXXXX 565 L AYRK CA+V+SSGQ KS+GLR DGR+DDRS+W Sbjct: 866 LYAYRKFCATVTSSGQLILPEALKLFPLYTLALTKSVGLRTDGRIDDRSFWINYVSSLST 925 Query: 566 LLAIPLVFPRMIALHDLTSRDDEDSL 643 LAIPLV+PRMI++HDL +D E S+ Sbjct: 926 PLAIPLVYPRMISVHDLDVKDTEGSV 951
>SC24C_HUMAN (P53992) Protein transport protein Sec24C (SEC24-related protein C)| Length = 1094 Score = 115 bits (287), Expect = 1e-25 Identities = 67/195 (34%), Positives = 99/195 (50%), Gaps = 2/195 (1%) Frame = +2 Query: 29 GFKFKXYSGNFCKRVPTDIDLPAIDSDKTIMVTFKHDDKFQENTECGFQCALLYTTVYGQ 208 G + + G F TD++L +D DKT+ V FKHDD+ E + QCALLYT+ GQ Sbjct: 760 GIRAVDFFGAFYMSNTTDVELAGLDGDKTVTVEFKHDDRLNEESGALLQCALLYTSCAGQ 819 Query: 209 RRIRVINISLPCTSTLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVRDQVTSTCINIL 388 RR+R+ N++L C + L +L+R + + Y+ K A G+ +S + VRD + + C IL Sbjct: 820 RRLRIHNLALNCCTQLADLYRNCETDTLINYMAKFAYRGVLNSPVKAVRDTLITQCAQIL 879 Query: 389 QAYRKHCASVSSSGQXXXXXXXXXXXXXXXXXVKSIGLRNDGRV--DDRSYWXXXXXXXX 562 YRK+CAS SS+GQ +KS L+ V DDR+Y Sbjct: 880 ACYRKNCASPSSAGQLILPECMKLLPVYLNCVLKSDVLQPGAEVTTDDRAYVRQLVTSMD 939 Query: 563 XLLAIPLVFPRMIAL 607 +PR++ L Sbjct: 940 VTETNVFFYPRLLPL 954
>SC24D_HUMAN (O94855) Protein transport protein Sec24D (SEC24-related protein D)| Length = 1032 Score = 105 bits (263), Expect = 9e-23 Identities = 59/198 (29%), Positives = 100/198 (50%), Gaps = 2/198 (1%) Frame = +2 Query: 29 GFKFKXYSGNFCKRVPTDIDLPAIDSDKTIMVTFKHDDKFQENTECGFQCALLYTTVYGQ 208 GF+ + G TD+++ AID DK + V FKHDDK E++ QCA+LYTT+ GQ Sbjct: 698 GFRATDFFGGILMNNTTDVEMAAIDCDKAVTVEFKHDDKLSEDSGALIQCAVLYTTISGQ 757 Query: 209 RRIRVINISLPCTSTLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVRDQVTSTCINIL 388 RR+R+ N+ L C+S L +L++ + +A + K A + L +R+ + + ++L Sbjct: 758 RRLRIHNLGLNCSSQLADLYKSCETDALINFFAKSAFKAVLHQPLKVIREILVNQTAHML 817 Query: 389 QAYRKHCASVSSSGQXXXXXXXXXXXXXXXXXVKSIGL--RNDGRVDDRSYWXXXXXXXX 562 YRK+CAS S++ Q +K+ L R + D+R+Y Sbjct: 818 ACYRKNCASPSAASQLILPDSMKVLPVYMNCLLKNCVLLSRPEISTDERAYQRQLVMTMG 877 Query: 563 XLLAIPLVFPRMIALHDL 616 + +P+++ +H L Sbjct: 878 VADSQLFFYPQLLPIHTL 895
>YNB3_SCHPO (Q9USS7) Hypothetical protein C4.03c in chromosome II| Length = 891 Score = 87.4 bits (215), Expect = 3e-17 Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 1/201 (0%) Frame = +2 Query: 29 GFKFKXYSGNFCKRVPTDIDLPAIDSDKTIMVTFKHDDKFQENTECGFQCALLYTTVYGQ 208 G + Y GNF +R P DI+ ++D+DK++ V F +D K + FQ A+LYTT G+ Sbjct: 543 GLRVSKYLGNFLQRTPQDIEFGSLDADKSVTVLFSYDGKLNGALDAHFQTAVLYTTPSGE 602 Query: 209 RRIRVINISLPCTSTLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVRDQVTSTCINIL 388 RR+RV+N TS + A +E + K A I + SL ++ + IL Sbjct: 603 RRVRVVNYCCAVTSKSYDTISLAIVEPIVAVLAKIASTNIAAGSLKDTSVRLVEGVVKIL 662 Query: 389 QAYRKHCASVSSSGQXXXXXXXXXXXXXXXXXVKSIGLRNDGRVDDRSYWXXXXXXXXXL 568 +YRK A+ + GQ +KS +R+ D + Sbjct: 663 SSYRKVAANRLTPGQLVLPKNLVLLPILILAVLKSSAIRSGSIHSDIRVSQLREVRAAPI 722 Query: 569 LAIPL-VFPRMIALHDLTSRD 628 + L ++P + ALH L D Sbjct: 723 QELMLNLYPNIYALHQLQPTD 743
>YIY8_SCHPO (Q9UUI5) Hypothetical protein C22F8.08 in chromosome I| Length = 926 Score = 76.6 bits (187), Expect = 6e-14 Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 4/200 (2%) Frame = +2 Query: 29 GFKFKXYSGNFCKRVPTDIDLPAIDSDKTIMVTFKHDDKFQENTECGFQCALLYTTVYGQ 208 G + + GNF R P+ D++ +V +D + FQ A+L+TT G+ Sbjct: 583 GLRMSSFYGNFFNRSSDLCAFPSFPRDQSYVVEVVIEDTITKPF-VSFQTAMLHTTCNGE 641 Query: 209 RRIRVINISLPCTSTLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVRDQVTSTCINIL 388 RRIRV+ ISLP T+++ +L+ AD A Y+ +A SS+L++ RD + S + IL Sbjct: 642 RRIRVLTISLPTTNSMTDLYASADQVAIAQYLTVRASEKALSSTLNEARDSIISKLVEIL 701 Query: 389 QAYRKHCASVSSSG--QXXXXXXXXXXXXXXXXXVKSIGLRNDGRV--DDRSYWXXXXXX 556 + Y+K+ A ++ K G R + D RS Sbjct: 702 EVYKKNLAGQNTGAAIPLQISTNLRLLPLLCLALTKHTGFRRSSHISSDLRSIALCYLST 761 Query: 557 XXXLLAIPLVFPRMIALHDL 616 L + ++P + +LHD+ Sbjct: 762 LPTPLLMRYIYPTLYSLHDM 781
>SC24A_HUMAN (O95486) Protein transport protein Sec24A (SEC24-related protein A)| (Fragment) Length = 1078 Score = 73.9 bits (180), Expect = 4e-13 Identities = 45/135 (33%), Positives = 66/135 (48%) Frame = +2 Query: 26 RGFKFKXYSGNFCKRVPTDIDLPAIDSDKTIMVTFKHDDKFQENTECGFQCALLYTTVYG 205 +G + GNF R + LP ++ D V ++ + FQ ALLYT+ G Sbjct: 740 KGLSIHTFHGNFFVRSTDLLSLPNVNPDAGYAVQMSVEESLTDTQLVSFQSALLYTSSKG 799 Query: 206 QRRIRVINISLPCTSTLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVRDQVTSTCINI 385 +RRIRV + LP STLN++F AD++A + A ++SLS RD + + I+ Sbjct: 800 ERRIRVHTLCLPVVSTLNDVFLGADVQAISGLLANMAVDRSMTASLSDARDALVNAVIDS 859 Query: 386 LQAYRKHCASVSSSG 430 L AYR S G Sbjct: 860 LSAYRSSVLSNQQPG 874
>SC24A_MOUSE (Q3U2P1) Protein transport protein Sec24A (SEC24-related protein A)| Length = 1090 Score = 73.6 bits (179), Expect = 5e-13 Identities = 45/135 (33%), Positives = 65/135 (48%) Frame = +2 Query: 26 RGFKFKXYSGNFCKRVPTDIDLPAIDSDKTIMVTFKHDDKFQENTECGFQCALLYTTVYG 205 +G + GNF R + LP ++ D V ++ + FQ ALLYT+ G Sbjct: 752 KGLSIHTFHGNFFVRSTDLLSLPNVNPDAGYAVQMSVEESLTDTQLVSFQSALLYTSSKG 811 Query: 206 QRRIRVINISLPCTSTLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVRDQVTSTCINI 385 +RRIRV + LP STLN +F AD++A + A ++SLS RD + + I+ Sbjct: 812 ERRIRVHTLCLPVVSTLNEVFLGADVQAISGLLANMAVDRSVTASLSDARDALVNAVIDS 871 Query: 386 LQAYRKHCASVSSSG 430 L AYR S G Sbjct: 872 LSAYRSSVLSGQQPG 886
>SC24B_HUMAN (O95487) Protein transport protein Sec24B (SEC24-related protein B)| Length = 1268 Score = 65.9 bits (159), Expect = 1e-10 Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 1/199 (0%) Frame = +2 Query: 26 RGFKFKXYSGNFCKRVPTDIDLPAIDSDKTIMVTFKHDDKFQENTECGFQCALLYTTVYG 205 +G + GNF R + L I+ D V ++ + + FQ ALLYT+ G Sbjct: 930 KGLSMHTFHGNFFVRSTDLLSLANINPDAGFAVQLSIEESLTDTSLVCFQTALLYTSSKG 989 Query: 206 QRRIRVINISLPCTSTLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVRDQVTSTCINI 385 +RRIRV + LP S+L +++ D++A + A SSSLS RD + + ++ Sbjct: 990 ERRIRVHTLCLPVVSSLADVYAGVDVQAAICLLANMAVDRSVSSSLSDARDALVNAVVDS 1049 Query: 386 LQAYRKHCASVSSSG-QXXXXXXXXXXXXXXXXXVKSIGLRNDGRVDDRSYWXXXXXXXX 562 L AY +++ S K+ R+DDR Y Sbjct: 1050 LSAYGSTVSNLQHSALMAPSSLKLFPLYVLALLKQKAFRTGTSTRLDDRVYAMCQIKSQP 1109 Query: 563 XLLAIPLVFPRMIALHDLT 619 + + ++ P + + LT Sbjct: 1110 LVHLMKMIHPNLYRIDRLT 1128
>SC24A_ARATH (Q9SFU0) Protein transport protein Sec24-like At3g07100| Length = 1038 Score = 64.3 bits (155), Expect = 3e-10 Identities = 38/125 (30%), Positives = 58/125 (46%) Frame = +2 Query: 26 RGFKFKXYSGNFCKRVPTDIDLPAIDSDKTIMVTFKHDDKFQENTECGFQCALLYTTVYG 205 +G +F Y GNF R + LPA+D DK + ++ + FQ ALLYT G Sbjct: 696 KGIRFSSYHGNFMLRSTDLLALPAVDCDKAYAMQLSLEETLLTSQTVYFQVALLYTASCG 755 Query: 206 QRRIRVINISLPCTSTLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVRDQVTSTCINI 385 +RRIRV P + L ++R AD + + + A S+ L R+ + + Sbjct: 756 ERRIRVHTSVAPVVTDLGEMYRQADTGSIVSLYARLAIEKSLSAKLDDARNAIQQKIVKA 815 Query: 386 LQAYR 400 L+ YR Sbjct: 816 LKEYR 820
>SFB3_YEAST (P38810) SED5-binding protein 3 (SEC24-related protein 3) (Lethal| with SEC13 protein 1) Length = 929 Score = 58.2 bits (139), Expect = 2e-08 Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 2/119 (1%) Frame = +2 Query: 77 TDID--LPAIDSDKTIMVTFKHDDKFQENTECGFQCALLYTTVYGQRRIRVINISLPCTS 250 TD D +P + D T+ V K+D K + T+ FQ ALLYT + G R++R IN S ++ Sbjct: 563 TDHDPIIPVLTRDTTLDVLLKYDSKIKTGTDVHFQTALLYTDIDGVRKVRSINTSGAVSN 622 Query: 251 TLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVRDQVTSTCINILQAYRKHCASVSSS 427 + +F++ + ++K + ++R + + IL YR +S SS+ Sbjct: 623 NIREIFKFINQNPVMRIMIKDVIKTLGDCDFVKIRRLIDDKMVEILTQYRGLVSSNSST 681
>SFB2_YEAST (P53953) SED5-binding protein 2 (SEC24-related protein 2)| Length = 876 Score = 50.1 bits (118), Expect = 6e-06 Identities = 33/125 (26%), Positives = 58/125 (46%) Frame = +2 Query: 29 GFKFKXYSGNFCKRVPTDIDLPAIDSDKTIMVTFKHDDKFQENTECGFQCALLYTTVYGQ 208 G + + G+F R + D++ + +D C Q + L T G+ Sbjct: 521 GLRATSFFGHFFNRSSDLCAFSTMPRDQSYLFGISIEDSLMAEY-CYLQVSTLLTLNTGE 579 Query: 209 RRIRVINISLPCTSTLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVRDQVTSTCINIL 388 RRIRV+ ++LP + + +F AD A ++ + A +SS+ RD +T + +IL Sbjct: 580 RRIRVMTLALPTSESAREVFASADQLAITDFMTQNAVTKALNSSMYSARDFITKSLEDIL 639 Query: 389 QAYRK 403 AY+K Sbjct: 640 NAYKK 644
>SEC24_YEAST (P40482) Protein transport protein Sec24 (Abnormal nuclear| morphology 1) Length = 926 Score = 45.8 bits (107), Expect = 1e-04 Identities = 32/134 (23%), Positives = 61/134 (45%) Frame = +2 Query: 29 GFKFKXYSGNFCKRVPTDIDLPAIDSDKTIMVTFKHDDKFQENTECGFQCALLYTTVYGQ 208 G + + G+F R + D++ + D+ + C Q A+L + Q Sbjct: 565 GLRMSRFYGHFFNRSSDLCAFSTMPRDQSYLFEVNVDESIMADY-CYVQVAVLLSLNNSQ 623 Query: 209 RRIRVINISLPCTSTLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVRDQVTSTCINIL 388 RRIR+I +++P T +L ++ AD A ++ +A +SSL R + + +IL Sbjct: 624 RRIRIITLAMPTTESLAEVYASADQLAIASFYNSKAVEKALNSSLDDARVLINKSVQDIL 683 Query: 389 QAYRKHCASVSSSG 430 Y+K +++G Sbjct: 684 ATYKKEIVVSNTAG 697
>PYHD_NPVLD (P20587) Polyhedrin (Major occlusion protein)| Length = 245 Score = 30.0 bits (66), Expect = 6.1 Identities = 19/57 (33%), Positives = 29/57 (50%) Frame = -2 Query: 551 RQQRPNRIDRLLSHHSSVLCF*PRPGYTKAEVLKPPEESTVQKNSQMHNVFGRPGEC 381 R RPNR + ++ H+ + C GY EV++ E STV+ N ++ R G C Sbjct: 126 RPTRPNRCYKFVAQHA-LRC---DEGYVPHEVIRIVEPSTVENNEYRISLAKRGGGC 178
>CMAH_PONPY (Q8MJC6) Cytidine monophosphate-N-acetylneuraminic acid hydroxylase| (EC 1.14.18.2) (CMP-N-acetylneuraminate monooxygenase) (CMP-N-acetylneuraminic acid hydroxylase) (CMP-NeuAc hydroxylase) (CMP-Neu5Ac hydroxylase) (Fragment) Length = 585 Score = 30.0 bits (66), Expect = 6.1 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%) Frame = -2 Query: 539 PNRIDRLLSHHSSVLCF*PRPGYT--KAEVLKPPEES 435 PN ++ L+ +S V+ + PRPG T A +LK P +S Sbjct: 376 PNELNNLIKKNSDVITWTPRPGATLDLARMLKDPTDS 412
>CMAH_HUMAN (Q9Y471) Cytidine monophosphate-N-acetylneuraminic acid| hydroxylase-like protein (CMP-NeuAc hydroxylase-like protein) Length = 486 Score = 29.6 bits (65), Expect = 8.0 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 12/53 (22%) Frame = -2 Query: 539 PNRIDRLLSHHSSVLCF*PRPGYT------------KAEVLKPPEESTVQKNS 417 PN ++ L+ +S V+ + PRPG T +++PPE + + K+S Sbjct: 277 PNELNNLIKKNSDVITWTPRPGATLDLGRMLKDRTDSKGIIEPPEGTKIYKDS 329
>CMAH_PANPA (Q8MJD0) Cytidine monophosphate-N-acetylneuraminic acid hydroxylase| (EC 1.14.18.2) (CMP-N-acetylneuraminate monooxygenase) (CMP-N-acetylneuraminic acid hydroxylase) (CMP-NeuAc hydroxylase) (CMP-Neu5Ac hydroxylase) (Fragment) Length = 600 Score = 29.6 bits (65), Expect = 8.0 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 12/53 (22%) Frame = -2 Query: 539 PNRIDRLLSHHSSVLCF*PRPGYT------------KAEVLKPPEESTVQKNS 417 PN ++ L+ +S V+ + PRPG T +++PPE + + K+S Sbjct: 376 PNELNNLIKKNSDVITWTPRPGATLDLGRMLKDPTDSKGIIEPPEGTKIYKDS 428
>CMAH_GORGO (Q8MJC8) Cytidine monophosphate-N-acetylneuraminic acid hydroxylase| (EC 1.14.18.2) (CMP-N-acetylneuraminate monooxygenase) (CMP-N-acetylneuraminic acid hydroxylase) (CMP-NeuAc hydroxylase) (CMP-Neu5Ac hydroxylase) (Fragment) Length = 600 Score = 29.6 bits (65), Expect = 8.0 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 12/53 (22%) Frame = -2 Query: 539 PNRIDRLLSHHSSVLCF*PRPGYT------------KAEVLKPPEESTVQKNS 417 PN ++ L+ +S V+ + PRPG T +++PPE + + K+S Sbjct: 376 PNELNNLIKKNSDVITWTPRPGATLDLGRMLKDPTDSKGIIEPPEGTKIYKDS 428
>CMAH_PANTR (O97598) Cytidine monophosphate-N-acetylneuraminic acid hydroxylase| (EC 1.14.18.2) (CMP-N-acetylneuraminate monooxygenase) (CMP-N-acetylneuraminic acid hydroxylase) (CMP-NeuAc hydroxylase) (CMP-Neu5Ac hydroxylase) Length = 590 Score = 29.6 bits (65), Expect = 8.0 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 12/53 (22%) Frame = -2 Query: 539 PNRIDRLLSHHSSVLCF*PRPGYT------------KAEVLKPPEESTVQKNS 417 PN ++ L+ +S V+ + PRPG T +++PPE + + K+S Sbjct: 381 PNELNNLIKKNSDVITWTPRPGATLDLGRMLKDPTDSKGIIEPPEGTKIYKDS 433
>CMAH_MACMU (Q9TUJ2) Cytidine monophosphate-N-acetylneuraminic acid hydroxylase| (EC 1.14.18.2) (CMP-N-acetylneuraminate monooxygenase) (CMP-N-acetylneuraminic acid hydroxylase) (CMP-NeuAc hydroxylase) (CMP-Neu5Ac hydroxylase) Length = 590 Score = 29.6 bits (65), Expect = 8.0 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 12/53 (22%) Frame = -2 Query: 539 PNRIDRLLSHHSSVLCF*PRPGYT------------KAEVLKPPEESTVQKNS 417 PN ++ L+ +S V+ + PRPG T +++PPE + + K+S Sbjct: 381 PNELNNLIKKNSDVITWTPRPGATLDLGRMLKDPTDSKGIIEPPEGTKIYKDS 433
>NUAM_SOLTU (Q43644) NADH-ubiquinone oxidoreductase 75 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75KD) (CI-75KD) (76 kDa mitochondrial complex I subunit) Length = 738 Score = 29.6 bits (65), Expect = 8.0 Identities = 12/38 (31%), Positives = 23/38 (60%) Frame = +2 Query: 314 AGIGIPSSSLSQVRDQVTSTCINILQAYRKHCASVSSS 427 AG+G+P SL +R ++ + N+L+ + A+ S+S Sbjct: 658 AGVGLPYDSLGAIRSRIKTVAPNLLEVDERQPATFSTS 695 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 92,028,831 Number of Sequences: 219361 Number of extensions: 1971069 Number of successful extensions: 3988 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 3884 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3985 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6029593548 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)