ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags9m03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SC24C_ARATH (Q9M291) Protein transport protein Sec24-like CEF 245 9e-65
2SC24B_ARATH (Q9M081) Putative protein transport protein Sec24-li... 218 1e-56
3SC24C_HUMAN (P53992) Protein transport protein Sec24C (SEC24-rel... 115 1e-25
4SC24D_HUMAN (O94855) Protein transport protein Sec24D (SEC24-rel... 105 9e-23
5YNB3_SCHPO (Q9USS7) Hypothetical protein C4.03c in chromosome II 87 3e-17
6YIY8_SCHPO (Q9UUI5) Hypothetical protein C22F8.08 in chromosome I 77 6e-14
7SC24A_HUMAN (O95486) Protein transport protein Sec24A (SEC24-rel... 74 4e-13
8SC24A_MOUSE (Q3U2P1) Protein transport protein Sec24A (SEC24-rel... 74 5e-13
9SC24B_HUMAN (O95487) Protein transport protein Sec24B (SEC24-rel... 66 1e-10
10SC24A_ARATH (Q9SFU0) Protein transport protein Sec24-like At3g07100 64 3e-10
11SFB3_YEAST (P38810) SED5-binding protein 3 (SEC24-related protei... 58 2e-08
12SFB2_YEAST (P53953) SED5-binding protein 2 (SEC24-related protei... 50 6e-06
13SEC24_YEAST (P40482) Protein transport protein Sec24 (Abnormal n... 46 1e-04
14PYHD_NPVLD (P20587) Polyhedrin (Major occlusion protein) 30 6.1
15CMAH_PONPY (Q8MJC6) Cytidine monophosphate-N-acetylneuraminic ac... 30 6.1
16CMAH_HUMAN (Q9Y471) Cytidine monophosphate-N-acetylneuraminic ac... 30 8.0
17CMAH_PANPA (Q8MJD0) Cytidine monophosphate-N-acetylneuraminic ac... 30 8.0
18CMAH_GORGO (Q8MJC8) Cytidine monophosphate-N-acetylneuraminic ac... 30 8.0
19CMAH_PANTR (O97598) Cytidine monophosphate-N-acetylneuraminic ac... 30 8.0
20CMAH_MACMU (Q9TUJ2) Cytidine monophosphate-N-acetylneuraminic ac... 30 8.0
21NUAM_SOLTU (Q43644) NADH-ubiquinone oxidoreductase 75 kDa subuni... 30 8.0

>SC24C_ARATH (Q9M291) Protein transport protein Sec24-like CEF|
          Length = 1097

 Score =  245 bits (625), Expect = 9e-65
 Identities = 115/206 (55%), Positives = 149/206 (72%)
 Frame = +2

Query: 26   RGFKFKXYSGNFCKRVPTDIDLPAIDSDKTIMVTFKHDDKFQENTECGFQCALLYTTVYG 205
            +G + + YSGNFCKR+PTDIDLPAID DK IMVT KHDDK Q+  ECGFQCALLYTT+ G
Sbjct: 762  QGIQVQEYSGNFCKRIPTDIDLPAIDCDKAIMVTLKHDDKLQDGAECGFQCALLYTTISG 821

Query: 206  QRRIRVINISLPCTSTLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVRDQVTSTCINI 385
            +RRIRV+N+S+PCT+ L+NLFR ADL++QF  ++KQA   IPS +L  V++Q T+ CI I
Sbjct: 822  ERRIRVLNLSIPCTNMLSNLFRSADLDSQFACMLKQAANEIPSKALPLVKEQATNDCITI 881

Query: 386  LQAYRKHCASVSSSGQXXXXXXXXXXXXXXXXXVKSIGLRNDGRVDDRSYWXXXXXXXXX 565
            L +YRK CA+V+S+GQ                  K +GLR DGR+DDRS+W         
Sbjct: 882  LHSYRKFCATVTSTGQLILPEALKLLPLYTLALTKGVGLRMDGRIDDRSFWINHVSSLST 941

Query: 566  LLAIPLVFPRMIALHDLTSRDDEDSL 643
             LAIPLV+PRMIA+HDL + D+E+++
Sbjct: 942  PLAIPLVYPRMIAVHDLDANDNEENV 967



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>SC24B_ARATH (Q9M081) Putative protein transport protein Sec24-like At4g32640|
          Length = 1069

 Score =  218 bits (555), Expect = 1e-56
 Identities = 108/206 (52%), Positives = 137/206 (66%)
 Frame = +2

Query: 26   RGFKFKXYSGNFCKRVPTDIDLPAIDSDKTIMVTFKHDDKFQENTECGFQCALLYTTVYG 205
            +G + + YSGNFCKR+PTDIDLPA            HDDK Q+  EC FQCALLYTT+YG
Sbjct: 758  QGIQVQEYSGNFCKRIPTDIDLPA------------HDDKLQDGAECAFQCALLYTTIYG 805

Query: 206  QRRIRVINISLPCTSTLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVRDQVTSTCINI 385
            +RRIRV  +SL CT+ L+NLFR ADL++QF  ++KQA   IPS +L  V++Q T++CIN 
Sbjct: 806  ERRIRVTTLSLSCTNMLSNLFRAADLDSQFACMLKQAANEIPSKALPLVKEQATNSCINA 865

Query: 386  LQAYRKHCASVSSSGQXXXXXXXXXXXXXXXXXVKSIGLRNDGRVDDRSYWXXXXXXXXX 565
            L AYRK CA+V+SSGQ                  KS+GLR DGR+DDRS+W         
Sbjct: 866  LYAYRKFCATVTSSGQLILPEALKLFPLYTLALTKSVGLRTDGRIDDRSFWINYVSSLST 925

Query: 566  LLAIPLVFPRMIALHDLTSRDDEDSL 643
             LAIPLV+PRMI++HDL  +D E S+
Sbjct: 926  PLAIPLVYPRMISVHDLDVKDTEGSV 951



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>SC24C_HUMAN (P53992) Protein transport protein Sec24C (SEC24-related protein C)|
          Length = 1094

 Score =  115 bits (287), Expect = 1e-25
 Identities = 67/195 (34%), Positives = 99/195 (50%), Gaps = 2/195 (1%)
 Frame = +2

Query: 29   GFKFKXYSGNFCKRVPTDIDLPAIDSDKTIMVTFKHDDKFQENTECGFQCALLYTTVYGQ 208
            G +   + G F     TD++L  +D DKT+ V FKHDD+  E +    QCALLYT+  GQ
Sbjct: 760  GIRAVDFFGAFYMSNTTDVELAGLDGDKTVTVEFKHDDRLNEESGALLQCALLYTSCAGQ 819

Query: 209  RRIRVINISLPCTSTLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVRDQVTSTCINIL 388
            RR+R+ N++L C + L +L+R  + +    Y+ K A  G+ +S +  VRD + + C  IL
Sbjct: 820  RRLRIHNLALNCCTQLADLYRNCETDTLINYMAKFAYRGVLNSPVKAVRDTLITQCAQIL 879

Query: 389  QAYRKHCASVSSSGQXXXXXXXXXXXXXXXXXVKSIGLRNDGRV--DDRSYWXXXXXXXX 562
              YRK+CAS SS+GQ                 +KS  L+    V  DDR+Y         
Sbjct: 880  ACYRKNCASPSSAGQLILPECMKLLPVYLNCVLKSDVLQPGAEVTTDDRAYVRQLVTSMD 939

Query: 563  XLLAIPLVFPRMIAL 607
                    +PR++ L
Sbjct: 940  VTETNVFFYPRLLPL 954



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>SC24D_HUMAN (O94855) Protein transport protein Sec24D (SEC24-related protein D)|
          Length = 1032

 Score =  105 bits (263), Expect = 9e-23
 Identities = 59/198 (29%), Positives = 100/198 (50%), Gaps = 2/198 (1%)
 Frame = +2

Query: 29   GFKFKXYSGNFCKRVPTDIDLPAIDSDKTIMVTFKHDDKFQENTECGFQCALLYTTVYGQ 208
            GF+   + G       TD+++ AID DK + V FKHDDK  E++    QCA+LYTT+ GQ
Sbjct: 698  GFRATDFFGGILMNNTTDVEMAAIDCDKAVTVEFKHDDKLSEDSGALIQCAVLYTTISGQ 757

Query: 209  RRIRVINISLPCTSTLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVRDQVTSTCINIL 388
            RR+R+ N+ L C+S L +L++  + +A   +  K A   +    L  +R+ + +   ++L
Sbjct: 758  RRLRIHNLGLNCSSQLADLYKSCETDALINFFAKSAFKAVLHQPLKVIREILVNQTAHML 817

Query: 389  QAYRKHCASVSSSGQXXXXXXXXXXXXXXXXXVKSIGL--RNDGRVDDRSYWXXXXXXXX 562
              YRK+CAS S++ Q                 +K+  L  R +   D+R+Y         
Sbjct: 818  ACYRKNCASPSAASQLILPDSMKVLPVYMNCLLKNCVLLSRPEISTDERAYQRQLVMTMG 877

Query: 563  XLLAIPLVFPRMIALHDL 616
               +    +P+++ +H L
Sbjct: 878  VADSQLFFYPQLLPIHTL 895



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>YNB3_SCHPO (Q9USS7) Hypothetical protein C4.03c in chromosome II|
          Length = 891

 Score = 87.4 bits (215), Expect = 3e-17
 Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 1/201 (0%)
 Frame = +2

Query: 29   GFKFKXYSGNFCKRVPTDIDLPAIDSDKTIMVTFKHDDKFQENTECGFQCALLYTTVYGQ 208
            G +   Y GNF +R P DI+  ++D+DK++ V F +D K     +  FQ A+LYTT  G+
Sbjct: 543  GLRVSKYLGNFLQRTPQDIEFGSLDADKSVTVLFSYDGKLNGALDAHFQTAVLYTTPSGE 602

Query: 209  RRIRVINISLPCTSTLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVRDQVTSTCINIL 388
            RR+RV+N     TS   +    A +E     + K A   I + SL     ++    + IL
Sbjct: 603  RRVRVVNYCCAVTSKSYDTISLAIVEPIVAVLAKIASTNIAAGSLKDTSVRLVEGVVKIL 662

Query: 389  QAYRKHCASVSSSGQXXXXXXXXXXXXXXXXXVKSIGLRNDGRVDDRSYWXXXXXXXXXL 568
             +YRK  A+  + GQ                 +KS  +R+     D             +
Sbjct: 663  SSYRKVAANRLTPGQLVLPKNLVLLPILILAVLKSSAIRSGSIHSDIRVSQLREVRAAPI 722

Query: 569  LAIPL-VFPRMIALHDLTSRD 628
              + L ++P + ALH L   D
Sbjct: 723  QELMLNLYPNIYALHQLQPTD 743



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>YIY8_SCHPO (Q9UUI5) Hypothetical protein C22F8.08 in chromosome I|
          Length = 926

 Score = 76.6 bits (187), Expect = 6e-14
 Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 4/200 (2%)
 Frame = +2

Query: 29   GFKFKXYSGNFCKRVPTDIDLPAIDSDKTIMVTFKHDDKFQENTECGFQCALLYTTVYGQ 208
            G +   + GNF  R       P+   D++ +V    +D   +     FQ A+L+TT  G+
Sbjct: 583  GLRMSSFYGNFFNRSSDLCAFPSFPRDQSYVVEVVIEDTITKPF-VSFQTAMLHTTCNGE 641

Query: 209  RRIRVINISLPCTSTLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVRDQVTSTCINIL 388
            RRIRV+ ISLP T+++ +L+  AD  A   Y+  +A     SS+L++ RD + S  + IL
Sbjct: 642  RRIRVLTISLPTTNSMTDLYASADQVAIAQYLTVRASEKALSSTLNEARDSIISKLVEIL 701

Query: 389  QAYRKHCASVSSSG--QXXXXXXXXXXXXXXXXXVKSIGLRNDGRV--DDRSYWXXXXXX 556
            + Y+K+ A  ++                       K  G R    +  D RS        
Sbjct: 702  EVYKKNLAGQNTGAAIPLQISTNLRLLPLLCLALTKHTGFRRSSHISSDLRSIALCYLST 761

Query: 557  XXXLLAIPLVFPRMIALHDL 616
                L +  ++P + +LHD+
Sbjct: 762  LPTPLLMRYIYPTLYSLHDM 781



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>SC24A_HUMAN (O95486) Protein transport protein Sec24A (SEC24-related protein A)|
            (Fragment)
          Length = 1078

 Score = 73.9 bits (180), Expect = 4e-13
 Identities = 45/135 (33%), Positives = 66/135 (48%)
 Frame = +2

Query: 26   RGFKFKXYSGNFCKRVPTDIDLPAIDSDKTIMVTFKHDDKFQENTECGFQCALLYTTVYG 205
            +G     + GNF  R    + LP ++ D    V    ++   +     FQ ALLYT+  G
Sbjct: 740  KGLSIHTFHGNFFVRSTDLLSLPNVNPDAGYAVQMSVEESLTDTQLVSFQSALLYTSSKG 799

Query: 206  QRRIRVINISLPCTSTLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVRDQVTSTCINI 385
            +RRIRV  + LP  STLN++F  AD++A    +   A     ++SLS  RD + +  I+ 
Sbjct: 800  ERRIRVHTLCLPVVSTLNDVFLGADVQAISGLLANMAVDRSMTASLSDARDALVNAVIDS 859

Query: 386  LQAYRKHCASVSSSG 430
            L AYR    S    G
Sbjct: 860  LSAYRSSVLSNQQPG 874



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>SC24A_MOUSE (Q3U2P1) Protein transport protein Sec24A (SEC24-related protein A)|
          Length = 1090

 Score = 73.6 bits (179), Expect = 5e-13
 Identities = 45/135 (33%), Positives = 65/135 (48%)
 Frame = +2

Query: 26   RGFKFKXYSGNFCKRVPTDIDLPAIDSDKTIMVTFKHDDKFQENTECGFQCALLYTTVYG 205
            +G     + GNF  R    + LP ++ D    V    ++   +     FQ ALLYT+  G
Sbjct: 752  KGLSIHTFHGNFFVRSTDLLSLPNVNPDAGYAVQMSVEESLTDTQLVSFQSALLYTSSKG 811

Query: 206  QRRIRVINISLPCTSTLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVRDQVTSTCINI 385
            +RRIRV  + LP  STLN +F  AD++A    +   A     ++SLS  RD + +  I+ 
Sbjct: 812  ERRIRVHTLCLPVVSTLNEVFLGADVQAISGLLANMAVDRSVTASLSDARDALVNAVIDS 871

Query: 386  LQAYRKHCASVSSSG 430
            L AYR    S    G
Sbjct: 872  LSAYRSSVLSGQQPG 886



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>SC24B_HUMAN (O95487) Protein transport protein Sec24B (SEC24-related protein B)|
          Length = 1268

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 1/199 (0%)
 Frame = +2

Query: 26   RGFKFKXYSGNFCKRVPTDIDLPAIDSDKTIMVTFKHDDKFQENTECGFQCALLYTTVYG 205
            +G     + GNF  R    + L  I+ D    V    ++   + +   FQ ALLYT+  G
Sbjct: 930  KGLSMHTFHGNFFVRSTDLLSLANINPDAGFAVQLSIEESLTDTSLVCFQTALLYTSSKG 989

Query: 206  QRRIRVINISLPCTSTLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVRDQVTSTCINI 385
            +RRIRV  + LP  S+L +++   D++A    +   A     SSSLS  RD + +  ++ 
Sbjct: 990  ERRIRVHTLCLPVVSSLADVYAGVDVQAAICLLANMAVDRSVSSSLSDARDALVNAVVDS 1049

Query: 386  LQAYRKHCASVSSSG-QXXXXXXXXXXXXXXXXXVKSIGLRNDGRVDDRSYWXXXXXXXX 562
            L AY    +++  S                     K+       R+DDR Y         
Sbjct: 1050 LSAYGSTVSNLQHSALMAPSSLKLFPLYVLALLKQKAFRTGTSTRLDDRVYAMCQIKSQP 1109

Query: 563  XLLAIPLVFPRMIALHDLT 619
             +  + ++ P +  +  LT
Sbjct: 1110 LVHLMKMIHPNLYRIDRLT 1128



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>SC24A_ARATH (Q9SFU0) Protein transport protein Sec24-like At3g07100|
          Length = 1038

 Score = 64.3 bits (155), Expect = 3e-10
 Identities = 38/125 (30%), Positives = 58/125 (46%)
 Frame = +2

Query: 26   RGFKFKXYSGNFCKRVPTDIDLPAIDSDKTIMVTFKHDDKFQENTECGFQCALLYTTVYG 205
            +G +F  Y GNF  R    + LPA+D DK   +    ++    +    FQ ALLYT   G
Sbjct: 696  KGIRFSSYHGNFMLRSTDLLALPAVDCDKAYAMQLSLEETLLTSQTVYFQVALLYTASCG 755

Query: 206  QRRIRVINISLPCTSTLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVRDQVTSTCINI 385
            +RRIRV     P  + L  ++R AD  +  +   + A     S+ L   R+ +    +  
Sbjct: 756  ERRIRVHTSVAPVVTDLGEMYRQADTGSIVSLYARLAIEKSLSAKLDDARNAIQQKIVKA 815

Query: 386  LQAYR 400
            L+ YR
Sbjct: 816  LKEYR 820



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>SFB3_YEAST (P38810) SED5-binding protein 3 (SEC24-related protein 3) (Lethal|
           with SEC13 protein 1)
          Length = 929

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
 Frame = +2

Query: 77  TDID--LPAIDSDKTIMVTFKHDDKFQENTECGFQCALLYTTVYGQRRIRVINISLPCTS 250
           TD D  +P +  D T+ V  K+D K +  T+  FQ ALLYT + G R++R IN S   ++
Sbjct: 563 TDHDPIIPVLTRDTTLDVLLKYDSKIKTGTDVHFQTALLYTDIDGVRKVRSINTSGAVSN 622

Query: 251 TLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVRDQVTSTCINILQAYRKHCASVSSS 427
            +  +F++ +       ++K     +      ++R  +    + IL  YR   +S SS+
Sbjct: 623 NIREIFKFINQNPVMRIMIKDVIKTLGDCDFVKIRRLIDDKMVEILTQYRGLVSSNSST 681



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>SFB2_YEAST (P53953) SED5-binding protein 2 (SEC24-related protein 2)|
          Length = 876

 Score = 50.1 bits (118), Expect = 6e-06
 Identities = 33/125 (26%), Positives = 58/125 (46%)
 Frame = +2

Query: 29  GFKFKXYSGNFCKRVPTDIDLPAIDSDKTIMVTFKHDDKFQENTECGFQCALLYTTVYGQ 208
           G +   + G+F  R         +  D++ +     +D       C  Q + L T   G+
Sbjct: 521 GLRATSFFGHFFNRSSDLCAFSTMPRDQSYLFGISIEDSLMAEY-CYLQVSTLLTLNTGE 579

Query: 209 RRIRVINISLPCTSTLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVRDQVTSTCINIL 388
           RRIRV+ ++LP + +   +F  AD  A   ++ + A     +SS+   RD +T +  +IL
Sbjct: 580 RRIRVMTLALPTSESAREVFASADQLAITDFMTQNAVTKALNSSMYSARDFITKSLEDIL 639

Query: 389 QAYRK 403
            AY+K
Sbjct: 640 NAYKK 644



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>SEC24_YEAST (P40482) Protein transport protein Sec24 (Abnormal nuclear|
           morphology 1)
          Length = 926

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 32/134 (23%), Positives = 61/134 (45%)
 Frame = +2

Query: 29  GFKFKXYSGNFCKRVPTDIDLPAIDSDKTIMVTFKHDDKFQENTECGFQCALLYTTVYGQ 208
           G +   + G+F  R         +  D++ +     D+    +  C  Q A+L +    Q
Sbjct: 565 GLRMSRFYGHFFNRSSDLCAFSTMPRDQSYLFEVNVDESIMADY-CYVQVAVLLSLNNSQ 623

Query: 209 RRIRVINISLPCTSTLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVRDQVTSTCINIL 388
           RRIR+I +++P T +L  ++  AD  A  ++   +A     +SSL   R  +  +  +IL
Sbjct: 624 RRIRIITLAMPTTESLAEVYASADQLAIASFYNSKAVEKALNSSLDDARVLINKSVQDIL 683

Query: 389 QAYRKHCASVSSSG 430
             Y+K     +++G
Sbjct: 684 ATYKKEIVVSNTAG 697



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>PYHD_NPVLD (P20587) Polyhedrin (Major occlusion protein)|
          Length = 245

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 19/57 (33%), Positives = 29/57 (50%)
 Frame = -2

Query: 551 RQQRPNRIDRLLSHHSSVLCF*PRPGYTKAEVLKPPEESTVQKNSQMHNVFGRPGEC 381
           R  RPNR  + ++ H+ + C     GY   EV++  E STV+ N    ++  R G C
Sbjct: 126 RPTRPNRCYKFVAQHA-LRC---DEGYVPHEVIRIVEPSTVENNEYRISLAKRGGGC 178



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>CMAH_PONPY (Q8MJC6) Cytidine monophosphate-N-acetylneuraminic acid hydroxylase|
           (EC 1.14.18.2) (CMP-N-acetylneuraminate monooxygenase)
           (CMP-N-acetylneuraminic acid hydroxylase) (CMP-NeuAc
           hydroxylase) (CMP-Neu5Ac hydroxylase) (Fragment)
          Length = 585

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = -2

Query: 539 PNRIDRLLSHHSSVLCF*PRPGYT--KAEVLKPPEES 435
           PN ++ L+  +S V+ + PRPG T   A +LK P +S
Sbjct: 376 PNELNNLIKKNSDVITWTPRPGATLDLARMLKDPTDS 412



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>CMAH_HUMAN (Q9Y471) Cytidine monophosphate-N-acetylneuraminic acid|
           hydroxylase-like protein (CMP-NeuAc hydroxylase-like
           protein)
          Length = 486

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 12/53 (22%)
 Frame = -2

Query: 539 PNRIDRLLSHHSSVLCF*PRPGYT------------KAEVLKPPEESTVQKNS 417
           PN ++ L+  +S V+ + PRPG T               +++PPE + + K+S
Sbjct: 277 PNELNNLIKKNSDVITWTPRPGATLDLGRMLKDRTDSKGIIEPPEGTKIYKDS 329



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>CMAH_PANPA (Q8MJD0) Cytidine monophosphate-N-acetylneuraminic acid hydroxylase|
           (EC 1.14.18.2) (CMP-N-acetylneuraminate monooxygenase)
           (CMP-N-acetylneuraminic acid hydroxylase) (CMP-NeuAc
           hydroxylase) (CMP-Neu5Ac hydroxylase) (Fragment)
          Length = 600

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 12/53 (22%)
 Frame = -2

Query: 539 PNRIDRLLSHHSSVLCF*PRPGYT------------KAEVLKPPEESTVQKNS 417
           PN ++ L+  +S V+ + PRPG T               +++PPE + + K+S
Sbjct: 376 PNELNNLIKKNSDVITWTPRPGATLDLGRMLKDPTDSKGIIEPPEGTKIYKDS 428



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>CMAH_GORGO (Q8MJC8) Cytidine monophosphate-N-acetylneuraminic acid hydroxylase|
           (EC 1.14.18.2) (CMP-N-acetylneuraminate monooxygenase)
           (CMP-N-acetylneuraminic acid hydroxylase) (CMP-NeuAc
           hydroxylase) (CMP-Neu5Ac hydroxylase) (Fragment)
          Length = 600

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 12/53 (22%)
 Frame = -2

Query: 539 PNRIDRLLSHHSSVLCF*PRPGYT------------KAEVLKPPEESTVQKNS 417
           PN ++ L+  +S V+ + PRPG T               +++PPE + + K+S
Sbjct: 376 PNELNNLIKKNSDVITWTPRPGATLDLGRMLKDPTDSKGIIEPPEGTKIYKDS 428



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>CMAH_PANTR (O97598) Cytidine monophosphate-N-acetylneuraminic acid hydroxylase|
           (EC 1.14.18.2) (CMP-N-acetylneuraminate monooxygenase)
           (CMP-N-acetylneuraminic acid hydroxylase) (CMP-NeuAc
           hydroxylase) (CMP-Neu5Ac hydroxylase)
          Length = 590

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 12/53 (22%)
 Frame = -2

Query: 539 PNRIDRLLSHHSSVLCF*PRPGYT------------KAEVLKPPEESTVQKNS 417
           PN ++ L+  +S V+ + PRPG T               +++PPE + + K+S
Sbjct: 381 PNELNNLIKKNSDVITWTPRPGATLDLGRMLKDPTDSKGIIEPPEGTKIYKDS 433



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>CMAH_MACMU (Q9TUJ2) Cytidine monophosphate-N-acetylneuraminic acid hydroxylase|
           (EC 1.14.18.2) (CMP-N-acetylneuraminate monooxygenase)
           (CMP-N-acetylneuraminic acid hydroxylase) (CMP-NeuAc
           hydroxylase) (CMP-Neu5Ac hydroxylase)
          Length = 590

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 12/53 (22%)
 Frame = -2

Query: 539 PNRIDRLLSHHSSVLCF*PRPGYT------------KAEVLKPPEESTVQKNS 417
           PN ++ L+  +S V+ + PRPG T               +++PPE + + K+S
Sbjct: 381 PNELNNLIKKNSDVITWTPRPGATLDLGRMLKDPTDSKGIIEPPEGTKIYKDS 433



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>NUAM_SOLTU (Q43644) NADH-ubiquinone oxidoreductase 75 kDa subunit,|
           mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3)
           (Complex I-75KD) (CI-75KD) (76 kDa mitochondrial complex
           I subunit)
          Length = 738

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +2

Query: 314 AGIGIPSSSLSQVRDQVTSTCINILQAYRKHCASVSSS 427
           AG+G+P  SL  +R ++ +   N+L+   +  A+ S+S
Sbjct: 658 AGVGLPYDSLGAIRSRIKTVAPNLLEVDERQPATFSTS 695


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,028,831
Number of Sequences: 219361
Number of extensions: 1971069
Number of successful extensions: 3988
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3985
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6029593548
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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