No.
Definition
Score (bits)
E Value
1 dbj|AK058672.1| Oryza sativa (japonica cultivar-group) cDNA clon...
198
2e-47
2 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...
159
1e-35
3 gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...
159
1e-35
4 emb|BX667525.2|CNS09SC3 Oryza sativa chromosome 12, . Partial se...
159
1e-35
5 gb|BT016644.1| Zea mays clone Contig477 mRNA sequence
137
5e-29
6 gb|AY107397.1| Zea mays PCO076624 mRNA sequence
129
1e-26
7 gb|AY105862.1| Zea mays PCO076623 mRNA sequence
113
7e-22
8 gb|BT016851.1| Zea mays clone Contig684 mRNA sequence
105
2e-19
9 emb|AL928747.3|CNS08CBK Oryza sativa chromosome 12, . BAC OSJNBa...
86
2e-13
10 gb|AC114011.5| Oryza sativa (japonica cultivar-group) chromosome...
76
2e-10
11 dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...
76
2e-10
12 gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...
76
2e-10
13 gb|BT016902.1| Zea mays clone Contig735 mRNA sequence
70
1e-08
14 ref|NM_114302.2| Arabidopsis thaliana CEF; protein binding / tra...
68
4e-08
15 ref|NM_001035731.1| Arabidopsis thaliana CEF; protein binding / ...
68
4e-08
16 emb|AJ251579.1|ATH251579 Arabidopsis thaliana mRNA for cef prote...
68
4e-08
17 gb|BT005737.1| Arabidopsis thaliana clone RAFL15-37-G11 (R20941)...
68
4e-08
18 ref|NM_119416.2| Arabidopsis thaliana protein binding AT4G32640 ...
42
2.2
19 ref|XM_859551.1| PREDICTED: Canis familiaris similar to WNK lysi...
42
2.2
20 ref|XM_859534.1| PREDICTED: Canis familiaris similar to WNK lysi...
42
2.2
21 ref|XM_549020.2| PREDICTED: Canis familiaris similar to WNK lysi...
42
2.2
22 ref|XM_859496.1| PREDICTED: Canis familiaris similar to WNK lysi...
42
2.2
23 emb|AL772172.18| Mouse DNA sequence from clone RP23-478A2 on chr...
42
2.2
24 gb|AY749109.1| Arabidopsis thaliana glycogenin-like starch initi...
40
8.8
25 ref|NM_112752.2| Arabidopsis thaliana transferase, transferring ...
40
8.8
26 ref|NM_001035645.1| Arabidopsis thaliana transferase, transferri...
40
8.8
27 gb|AC120366.9| Mus musculus chromosome 1, clone RP24-294P1, comp...
40
8.8
28 gb|AY623111.1| Homo sapiens CDC14 cell division cycle 14 homolog...
40
8.8
29 gb|AC103613.7| Mus musculus chromosome 14, clone RP24-75B12, com...
40
8.8
30 gb|AC112926.7| Mus musculus chromosome 3, clone RP23-215M7, comp...
40
8.8
31 emb|AJ969414.1| Maize yellow stripe virus segment 3, partial seq...
40
8.8
32 gb|AY142690.1| Arabidopsis thaliana unknown protein (At3g18660) ...
40
8.8
33 gb|AY056133.1| Arabidopsis thaliana unknown protein (At3g18660) ...
40
8.8
34 emb|AL138641.2|ATT22K7 Arabidopsis thaliana DNA chromosome 3, BA...
40
8.8
35 gb|AC121161.2| Homo sapiens BAC clone RP11-781M16 from 4, comple...
40
8.8
36 gb|AC012229.8| Homo sapiens chromosome 15, clone RP11-182L7, com...
40
8.8
37 gb|AC125289.1| Homo sapiens chromosome 4 clone RP11-781M16, comp...
40
8.8
38 gb|AC104457.2| Homo sapiens chromosome 1 clone RP5-837M10, compl...
40
8.8
39 gb|AC116560.5| Ustilago hordei clone uhobac-4k21, complete sequence
40
8.8
40 gb|AC114899.5| Ustilago hordei strain 4875-4 clone uhobac-1n1, c...
40
8.8
41 gb|AC026741.6| Homo sapiens chromosome 5 clone CTD-2653M23, comp...
40
8.8
42 gb|AC019341.6| Homo sapiens BAC clone RP11-719M18 from 4, comple...
40
8.8
43 gb|AC010380.5| Homo sapiens chromosome 5 clone CTD-2066C3, compl...
40
8.8
44 gb|AC026463.5| Homo sapiens chromosome 5 clone RP11-317I23, comp...
40
8.8
45 gb|AF256764.1|AF256764 Salmo salar clone BHMS129 microsatellite ...
40
8.8
46 gb|AF426190.1| Plagiomnium ellipticum 23S ribosomal RNA gene, pa...
40
8.8
47 gb|AF426189.1| Splachnum luteum 23S ribosomal RNA gene, partial ...
40
8.8
48 dbj|AB026654.1| Arabidopsis thaliana genomic DNA, chromosome 3, ...
40
8.8
49 emb|AM118080.1| Ustilago hordei mating type region MAT-1, strain...
40
8.8
50 gb|AC161883.6| Mus musculus BAC clone RP23-91K1 from chromosome ...
40
8.8
51 gb|AF033642.1| Hylocomium splendens 23S ribosomal RNA gene, part...
40
8.8
52 emb|AL773525.5| Mouse DNA sequence from clone RP23-169L4 on chro...
40
8.8
53 emb|AL590994.13| Mouse DNA sequence from clone RP23-382C19 on ch...
40
8.8
>dbj|AP008218.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
sequence
Length = 27566993
Score = 159 bits (80), Expect = 1e-35
Identities = 128/144 (88%)
Strand = Plus / Minus
Query: 171 ttcagtgtgcacttctttacaccacggtttatgggcaaagaaggatacgggtcataaata 230
|||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 13862328 ttcagtgtgcacttctttacacgacggtatatggacaaagaaggatacgggtcataaacc 13862269
Query: 231 tttcacttccatgcacaagcacgctcaacaaccttttccgatatgctgatctggaagcac 290
| |||||| ||||||||| ||||| |||||||||||||||||||||||||||| |||
Sbjct: 13862268 tctcactttcatgcacaaatgtgctcagcaaccttttccgatatgctgatctggaaacac 13862209
Query: 291 agttcacatatgttgttaagcaag 314
|||| || |||||||| |||||||
Sbjct: 13862208 agtttacctatgttgtgaagcaag 13862185
Score = 139 bits (70), Expect = 1e-29
Identities = 130/150 (86%)
Strand = Plus / Minus
Query: 325 cattccatcaagttctctgtcccaagtaagggaccaggtaacaagtacatgcatcaacat 384
||||||||||| |||| |||||||| |||||||| || || || ||||||||||| ||
Sbjct: 13861620 cattccatcaacacctctatcccaagttagggaccaagtgacgagcacatgcatcaatat 13861561
Query: 385 tctccaggcctaccgaaaacattgtgcatctgtgagttcttctggacagttgattcttcc 444
|||||| | ||||||||||||||||||||||| |||||||| ||||| |||||||||||
Sbjct: 13861560 actccagtcttaccgaaaacattgtgcatctgtaagttcttcgggacaattgattcttcc 13861501
Query: 445 ggaggctttaaaacttctgcctttgtatac 474
|||||| |||| || ||||||||||||||
Sbjct: 13861500 tgaggctctaaagctcctgcctttgtatac 13861471
Score = 131 bits (66), Expect = 3e-27
Identities = 111/126 (88%)
Strand = Plus / Minus
Query: 501 tgaggaatgatgggagagtagacgatcgatcctattgggtctctgttgtctcctcagttt 560
|||||| |||||||||| | || ||||| ||||||||||| || |||||| ||| |||
Sbjct: 13861354 tgaggactgatgggagattggatgatcggtcctattgggtgtcaactgtctcttcaattt 13861295
Query: 561 ctgtgttattagccattccattggtgttccctaggatgattgctctccatgatcttacat 620
|||||||| |||||||||||||||||||||||||||||||||| |||||||||||| | |
Sbjct: 13861294 ctgtgttactagccattccattggtgttccctaggatgattgccctccatgatcttgcgt 13861235
Query: 621 caaggg 626
||||||
Sbjct: 13861234 caaggg 13861229
Score = 85.7 bits (43), Expect = 2e-13
Identities = 59/63 (93%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 26 aggggcttcaagttcaagnactattctggcaacttctgcaagcgtgttcctactgatatt 85
|||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 13863724 agggacttcaagttcaag-actattctggcaacttctgccggcgtgttcctactgatatt 13863666
Query: 86 gat 88
|||
Sbjct: 13863665 gat 13863663
Score = 75.8 bits (38), Expect = 2e-10
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 98 attgactctgacaaaaccataatggttaccttcaagcatgatgataagtttcaggagaat 157
|||||||| ||||||||||||||||| ||||| ||||||||||| || || |||||||||
Sbjct: 13863153 attgactcggacaaaaccataatggtcacctttaagcatgatgacaaattgcaggagaat 13863094
Query: 158 acagagtgtg 167
|||| ||||
Sbjct: 13863093 tcagaatgtg 13863084
Score = 44.1 bits (22), Expect = 0.56
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1 gctgtcatgcgtgtcaggtgcagtca 26
|||||||||||||| |||||||||||
Sbjct: 13863832 gctgtcatgcgtgtgaggtgcagtca 13863807
>gb|DP000011.1 | Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
Length = 27492551
Score = 159 bits (80), Expect = 1e-35
Identities = 128/144 (88%)
Strand = Plus / Minus
Query: 171 ttcagtgtgcacttctttacaccacggtttatgggcaaagaaggatacgggtcataaata 230
|||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 13816608 ttcagtgtgcacttctttacacgacggtatatggacaaagaaggatacgggtcataaacc 13816549
Query: 231 tttcacttccatgcacaagcacgctcaacaaccttttccgatatgctgatctggaagcac 290
| |||||| ||||||||| ||||| |||||||||||||||||||||||||||| |||
Sbjct: 13816548 tctcactttcatgcacaaatgtgctcagcaaccttttccgatatgctgatctggaaacac 13816489
Query: 291 agttcacatatgttgttaagcaag 314
|||| || |||||||| |||||||
Sbjct: 13816488 agtttacctatgttgtgaagcaag 13816465
Score = 139 bits (70), Expect = 1e-29
Identities = 130/150 (86%)
Strand = Plus / Minus
Query: 325 cattccatcaagttctctgtcccaagtaagggaccaggtaacaagtacatgcatcaacat 384
||||||||||| |||| |||||||| |||||||| || || || ||||||||||| ||
Sbjct: 13815900 cattccatcaacacctctatcccaagttagggaccaagtgacgagcacatgcatcaatat 13815841
Query: 385 tctccaggcctaccgaaaacattgtgcatctgtgagttcttctggacagttgattcttcc 444
|||||| | ||||||||||||||||||||||| |||||||| ||||| |||||||||||
Sbjct: 13815840 actccagtcttaccgaaaacattgtgcatctgtaagttcttcgggacaattgattcttcc 13815781
Query: 445 ggaggctttaaaacttctgcctttgtatac 474
|||||| |||| || ||||||||||||||
Sbjct: 13815780 tgaggctctaaagctcctgcctttgtatac 13815751
Score = 131 bits (66), Expect = 3e-27
Identities = 111/126 (88%)
Strand = Plus / Minus
Query: 501 tgaggaatgatgggagagtagacgatcgatcctattgggtctctgttgtctcctcagttt 560
|||||| |||||||||| | || ||||| ||||||||||| || |||||| ||| |||
Sbjct: 13815634 tgaggactgatgggagattggatgatcggtcctattgggtgtcaactgtctcttcaattt 13815575
Query: 561 ctgtgttattagccattccattggtgttccctaggatgattgctctccatgatcttacat 620
|||||||| |||||||||||||||||||||||||||||||||| |||||||||||| | |
Sbjct: 13815574 ctgtgttactagccattccattggtgttccctaggatgattgccctccatgatcttgcgt 13815515
Query: 621 caaggg 626
||||||
Sbjct: 13815514 caaggg 13815509
Score = 85.7 bits (43), Expect = 2e-13
Identities = 59/63 (93%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 26 aggggcttcaagttcaagnactattctggcaacttctgcaagcgtgttcctactgatatt 85
|||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 13818004 agggacttcaagttcaag-actattctggcaacttctgccggcgtgttcctactgatatt 13817946
Query: 86 gat 88
|||
Sbjct: 13817945 gat 13817943
Score = 75.8 bits (38), Expect = 2e-10
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 98 attgactctgacaaaaccataatggttaccttcaagcatgatgataagtttcaggagaat 157
|||||||| ||||||||||||||||| ||||| ||||||||||| || || |||||||||
Sbjct: 13817433 attgactcggacaaaaccataatggtcacctttaagcatgatgacaaattgcaggagaat 13817374
Query: 158 acagagtgtg 167
|||| ||||
Sbjct: 13817373 tcagaatgtg 13817364
Score = 44.1 bits (22), Expect = 0.56
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1 gctgtcatgcgtgtcaggtgcagtca 26
|||||||||||||| |||||||||||
Sbjct: 13818112 gctgtcatgcgtgtgaggtgcagtca 13818087
>emb|BX667525.2 |CNS09SC3 Oryza sativa chromosome 12, . Partial sequence from PAC P0185F07 of
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 50021
Score = 159 bits (80), Expect = 1e-35
Identities = 128/144 (88%)
Strand = Plus / Minus
Query: 171 ttcagtgtgcacttctttacaccacggtttatgggcaaagaaggatacgggtcataaata 230
|||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 31131 ttcagtgtgcacttctttacacgacggtatatggacaaagaaggatacgggtcataaacc 31072
Query: 231 tttcacttccatgcacaagcacgctcaacaaccttttccgatatgctgatctggaagcac 290
| |||||| ||||||||| ||||| |||||||||||||||||||||||||||| |||
Sbjct: 31071 tctcactttcatgcacaaatgtgctcagcaaccttttccgatatgctgatctggaaacac 31012
Query: 291 agttcacatatgttgttaagcaag 314
|||| || |||||||| |||||||
Sbjct: 31011 agtttacctatgttgtgaagcaag 30988
Score = 139 bits (70), Expect = 1e-29
Identities = 130/150 (86%)
Strand = Plus / Minus
Query: 325 cattccatcaagttctctgtcccaagtaagggaccaggtaacaagtacatgcatcaacat 384
||||||||||| |||| |||||||| |||||||| || || || ||||||||||| ||
Sbjct: 30423 cattccatcaacacctctatcccaagttagggaccaagtgacgagcacatgcatcaatat 30364
Query: 385 tctccaggcctaccgaaaacattgtgcatctgtgagttcttctggacagttgattcttcc 444
|||||| | ||||||||||||||||||||||| |||||||| ||||| |||||||||||
Sbjct: 30363 actccagtcttaccgaaaacattgtgcatctgtaagttcttcgggacaattgattcttcc 30304
Query: 445 ggaggctttaaaacttctgcctttgtatac 474
|||||| |||| || ||||||||||||||
Sbjct: 30303 tgaggctctaaagctcctgcctttgtatac 30274
Score = 131 bits (66), Expect = 3e-27
Identities = 111/126 (88%)
Strand = Plus / Minus
Query: 501 tgaggaatgatgggagagtagacgatcgatcctattgggtctctgttgtctcctcagttt 560
|||||| |||||||||| | || ||||| ||||||||||| || |||||| ||| |||
Sbjct: 30157 tgaggactgatgggagattggatgatcggtcctattgggtgtcaactgtctcttcaattt 30098
Query: 561 ctgtgttattagccattccattggtgttccctaggatgattgctctccatgatcttacat 620
|||||||| |||||||||||||||||||||||||||||||||| |||||||||||| | |
Sbjct: 30097 ctgtgttactagccattccattggtgttccctaggatgattgccctccatgatcttgcgt 30038
Query: 621 caaggg 626
||||||
Sbjct: 30037 caaggg 30032
Score = 85.7 bits (43), Expect = 2e-13
Identities = 59/63 (93%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 26 aggggcttcaagttcaagnactattctggcaacttctgcaagcgtgttcctactgatatt 85
|||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 32527 agggacttcaagttcaag-actattctggcaacttctgccggcgtgttcctactgatatt 32469
Query: 86 gat 88
|||
Sbjct: 32468 gat 32466
Score = 75.8 bits (38), Expect = 2e-10
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 98 attgactctgacaaaaccataatggttaccttcaagcatgatgataagtttcaggagaat 157
|||||||| ||||||||||||||||| ||||| ||||||||||| || || |||||||||
Sbjct: 31956 attgactcggacaaaaccataatggtcacctttaagcatgatgacaaattgcaggagaat 31897
Query: 158 acagagtgtg 167
|||| ||||
Sbjct: 31896 tcagaatgtg 31887
Score = 44.1 bits (22), Expect = 0.56
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1 gctgtcatgcgtgtcaggtgcagtca 26
|||||||||||||| |||||||||||
Sbjct: 32635 gctgtcatgcgtgtgaggtgcagtca 32610
>gb|AC114011.5 | Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBa0078f20, complete sequence
Length = 151042
Score = 75.8 bits (38), Expect = 2e-10
Identities = 92/110 (83%)
Strand = Plus / Plus
Query: 362 gtaacaagtacatgcatcaacattctccaggcctaccgaaaacattgtgcatctgtgagt 421
||||||| |||||| || || ||||||||| ||||||| ||| ||||||||||||| ||
Sbjct: 86472 gtaacaaatacatgtataaatattctccagtcctaccgtaaatattgtgcatctgtaagc 86531
Query: 422 tcttctggacagttgattcttccggaggctttaaaacttctgcctttgta 471
|| ||||| |||||||| ||||| ||||| | ||||| ||||| |||||
Sbjct: 86532 tcatctgggcagttgatccttccagaggcactcaaactcctgcccttgta 86581
Score = 75.8 bits (38), Expect = 2e-10
Identities = 59/65 (90%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 24 tcaggggcttcaagttcaagnactattctggcaacttctgcaagcgtgttcctactgata 83
||||||||| |||||||| | |||||| |||||| ||||||||||||||||||||||| |
Sbjct: 84255 tcaggggctccaagttca-ggactattttggcaatttctgcaagcgtgttcctactgaca 84313
Query: 84 ttgat 88
|||||
Sbjct: 84314 ttgat 84318
Score = 69.9 bits (35), Expect = 1e-08
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 548 gtctcctcagtttctgtgttattagccattccattggtgttccctaggatgattgctctc 607
||||||||||||||||| ||||||| ||||||||||||||||||| ||||| | |
Sbjct: 86742 gtctcctcagtttctgttctattagctgttccattggtgttccctagattgattccgatt 86801
Query: 608 catgatcttacatcaaggg 626
|||||||| ||||||||||
Sbjct: 86802 catgatctcacatcaaggg 86820
Score = 69.9 bits (35), Expect = 1e-08
Identities = 107/131 (81%)
Strand = Plus / Plus
Query: 169 ttttcagtgtgcacttctttacaccacggtttatgggcaaagaaggatacgggtcataaa 228
||||||||| || ||||| ||||| || || ||||| ||||||||||| || || || ||
Sbjct: 86112 ttttcagtgcgctcttctctacactactgtatatggacaaagaaggattcgagttatgaa 86171
Query: 229 tatttcacttccatgcacaagcacgctcaacaaccttttccgatatgctgatctggaagc 288
| ||||| |||||||||| || ||||| || || ||||||||||||||| ||||| |
Sbjct: 86172 cctctcactcccatgcacaaacatgctcagtaatctcttccgatatgctgatttggaaac 86231
Query: 289 acagttcacat 299
|||||| ||||
Sbjct: 86232 acagtttacat 86242
Score = 67.9 bits (34), Expect = 4e-08
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 98 attgactctgacaaaaccataatggttaccttcaagcatgatgataagtttcaggagaat 157
||||| ||||||||||| |||||||| ||||| ||||| ||||| ||||| ||||| |||
Sbjct: 85156 attgattctgacaaaactataatggtcacctttaagcacgatgacaagttacaggaaaat 85215
Query: 158 acagagtgtggttt 171
|||| ||||||||
Sbjct: 85216 tcagaatgtggttt 85229
>dbj|AP008217.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
sequence
Length = 28386948
Score = 75.8 bits (38), Expect = 2e-10
Identities = 92/110 (83%)
Strand = Plus / Plus
Query: 362 gtaacaagtacatgcatcaacattctccaggcctaccgaaaacattgtgcatctgtgagt 421
||||||| |||||| || || ||||||||| ||||||| ||| ||||||||||||| ||
Sbjct: 16346037 gtaacaaatacatgtataaatattctccagtcctaccgtaaatattgtgcatctgtaagc 16346096
Query: 422 tcttctggacagttgattcttccggaggctttaaaacttctgcctttgta 471
|| ||||| |||||||| ||||| ||||| | ||||| ||||| |||||
Sbjct: 16346097 tcatctgggcagttgatccttccagaggcactcaaactcctgcccttgta 16346146
Score = 75.8 bits (38), Expect = 2e-10
Identities = 59/65 (90%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 24 tcaggggcttcaagttcaagnactattctggcaacttctgcaagcgtgttcctactgata 83
||||||||| |||||||| | |||||| |||||| ||||||||||||||||||||||| |
Sbjct: 16343820 tcaggggctccaagttca-ggactattttggcaatttctgcaagcgtgttcctactgaca 16343878
Query: 84 ttgat 88
|||||
Sbjct: 16343879 ttgat 16343883
Score = 69.9 bits (35), Expect = 1e-08
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 548 gtctcctcagtttctgtgttattagccattccattggtgttccctaggatgattgctctc 607
||||||||||||||||| ||||||| ||||||||||||||||||| ||||| | |
Sbjct: 16346307 gtctcctcagtttctgttctattagctgttccattggtgttccctagattgattccgatt 16346366
Query: 608 catgatcttacatcaaggg 626
|||||||| ||||||||||
Sbjct: 16346367 catgatctcacatcaaggg 16346385
Score = 69.9 bits (35), Expect = 1e-08
Identities = 107/131 (81%)
Strand = Plus / Plus
Query: 169 ttttcagtgtgcacttctttacaccacggtttatgggcaaagaaggatacgggtcataaa 228
||||||||| || ||||| ||||| || || ||||| ||||||||||| || || || ||
Sbjct: 16345677 ttttcagtgcgctcttctctacactactgtatatggacaaagaaggattcgagttatgaa 16345736
Query: 229 tatttcacttccatgcacaagcacgctcaacaaccttttccgatatgctgatctggaagc 288
| ||||| |||||||||| || ||||| || || ||||||||||||||| ||||| |
Sbjct: 16345737 cctctcactcccatgcacaaacatgctcagtaatctcttccgatatgctgatttggaaac 16345796
Query: 289 acagttcacat 299
|||||| ||||
Sbjct: 16345797 acagtttacat 16345807
Score = 67.9 bits (34), Expect = 4e-08
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 98 attgactctgacaaaaccataatggttaccttcaagcatgatgataagtttcaggagaat 157
||||| ||||||||||| |||||||| ||||| ||||| ||||| ||||| ||||| |||
Sbjct: 16344721 attgattctgacaaaactataatggtcacctttaagcacgatgacaagttacaggaaaat 16344780
Query: 158 acagagtgtggttt 171
|||| ||||||||
Sbjct: 16344781 tcagaatgtggttt 16344794
>gb|DP000010.1 | Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
Length = 28369397
Score = 75.8 bits (38), Expect = 2e-10
Identities = 92/110 (83%)
Strand = Plus / Plus
Query: 362 gtaacaagtacatgcatcaacattctccaggcctaccgaaaacattgtgcatctgtgagt 421
||||||| |||||| || || ||||||||| ||||||| ||| ||||||||||||| ||
Sbjct: 16436016 gtaacaaatacatgtataaatattctccagtcctaccgtaaatattgtgcatctgtaagc 16436075
Query: 422 tcttctggacagttgattcttccggaggctttaaaacttctgcctttgta 471
|| ||||| |||||||| ||||| ||||| | ||||| ||||| |||||
Sbjct: 16436076 tcatctgggcagttgatccttccagaggcactcaaactcctgcccttgta 16436125
Score = 75.8 bits (38), Expect = 2e-10
Identities = 59/65 (90%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 24 tcaggggcttcaagttcaagnactattctggcaacttctgcaagcgtgttcctactgata 83
||||||||| |||||||| | |||||| |||||| ||||||||||||||||||||||| |
Sbjct: 16433799 tcaggggctccaagttca-ggactattttggcaatttctgcaagcgtgttcctactgaca 16433857
Query: 84 ttgat 88
|||||
Sbjct: 16433858 ttgat 16433862
Score = 69.9 bits (35), Expect = 1e-08
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 548 gtctcctcagtttctgtgttattagccattccattggtgttccctaggatgattgctctc 607
||||||||||||||||| ||||||| ||||||||||||||||||| ||||| | |
Sbjct: 16436286 gtctcctcagtttctgttctattagctgttccattggtgttccctagattgattccgatt 16436345
Query: 608 catgatcttacatcaaggg 626
|||||||| ||||||||||
Sbjct: 16436346 catgatctcacatcaaggg 16436364
Score = 69.9 bits (35), Expect = 1e-08
Identities = 107/131 (81%)
Strand = Plus / Plus
Query: 169 ttttcagtgtgcacttctttacaccacggtttatgggcaaagaaggatacgggtcataaa 228
||||||||| || ||||| ||||| || || ||||| ||||||||||| || || || ||
Sbjct: 16435656 ttttcagtgcgctcttctctacactactgtatatggacaaagaaggattcgagttatgaa 16435715
Query: 229 tatttcacttccatgcacaagcacgctcaacaaccttttccgatatgctgatctggaagc 288
| ||||| |||||||||| || ||||| || || ||||||||||||||| ||||| |
Sbjct: 16435716 cctctcactcccatgcacaaacatgctcagtaatctcttccgatatgctgatttggaaac 16435775
Query: 289 acagttcacat 299
|||||| ||||
Sbjct: 16435776 acagtttacat 16435786
Score = 67.9 bits (34), Expect = 4e-08
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 98 attgactctgacaaaaccataatggttaccttcaagcatgatgataagtttcaggagaat 157
||||| ||||||||||| |||||||| ||||| ||||| ||||| ||||| ||||| |||
Sbjct: 16434700 attgattctgacaaaactataatggtcacctttaagcacgatgacaagttacaggaaaat 16434759
Query: 158 acagagtgtggttt 171
|||| ||||||||
Sbjct: 16434760 tcagaatgtggttt 16434773
>gb|AF426190.1 | Plagiomnium ellipticum 23S ribosomal RNA gene, partial sequence;
internal transcribed spacer 2, 4.5S ribosomal RNA gene,
internal transcribed spacer 3, and 5S ribosomal RNA
gene, complete sequence; 5S rRNA-trnR intergenic spacer,
partial sequence; chloroplast genes for chloroplast
products
Length = 743
Score = 40.1 bits (20), Expect = 8.8
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 566 ttattagccattccattggt 585
||||||||||||||||||||
Sbjct: 679 ttattagccattccattggt 698
>gb|AF426189.1 | Splachnum luteum 23S ribosomal RNA gene, partial sequence; internal
transcribed spacer 2, 4.5S ribosomal RNA gene, internal
transcribed spacer 3, and 5S ribosomal RNA gene,
complete sequence; 5S rRNA-trnR intergenic spacer,
partial sequence; chloroplast genes for chloroplast
products
Length = 737
Score = 40.1 bits (20), Expect = 8.8
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 566 ttattagccattccattggt 585
||||||||||||||||||||
Sbjct: 670 ttattagccattccattggt 689
>gb|AF033642.1 | Hylocomium splendens 23S ribosomal RNA gene, partial sequence;
internal transcribed spacer 2, 4.5S ribosomal RNA gene,
internal transcribed spacer 3, and 5S ribosomal RNA
gene, complete sequence, chloroplast genes for
chloroplast RNAs
Length = 765
Score = 40.1 bits (20), Expect = 8.8
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 566 ttattagccattccattggt 585
||||||||||||||||||||
Sbjct: 692 ttattagccattccattggt 711
>emb|AL590994.13 | Mouse DNA sequence from clone RP23-382C19 on chromosome 11, complete
sequence
Length = 207814
Score = 40.1 bits (20), Expect = 8.8
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 478 ggccttggttaaaagcatag 497
||||||||||||||||||||
Sbjct: 55328 ggccttggttaaaagcatag 55347
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,767,472
Number of Sequences: 3902068
Number of extensions: 5767472
Number of successful extensions: 102494
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 102243
Number of HSP's gapped (non-prelim): 231
length of query: 645
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 622
effective length of database: 17,143,297,704
effective search space: 10663131171888
effective search space used: 10663131171888
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)