Clone Name | bags9m02 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_474079.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2196 Score = 416 bits (210), Expect = e-113 Identities = 477/566 (84%) Strand = Plus / Plus Query: 28 atgcttgtgaagctgaagactgaatgtggctaccagtttacctcaaagttggaaagcatg 87 |||||||||||||||||||| |||||||||||||||||||| ||||| |||||| ||||| Sbjct: 1333 atgcttgtgaagctgaagacggaatgtggctaccagtttacgtcaaaattggaaggcatg 1392 Query: 88 ttcactgatttgaagacgtctcaggatacgatgcaaagtttctatgccaatcttgctggt 147 |||| |||| ||||||| || || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 1393 ttcaatgatctgaagacatcgcatgatactatgcaaagtttttatgctaatctctctggt 1452 Query: 148 gacgttgatggcccaactatatctgtccagatactcaccactggatcctggccaacacaa 207 || |||| ||||||| ||||| |||||||||||||||||||| || ||||||||||| Sbjct: 1453 gatactgatagcccaacaatatcagtccagatactcaccactgggtcttggccaacacag 1512 Query: 208 ccatgcgctacctgcaatcttccacctgagatccttgttgtttctgagcagttccgggca 267 ||||| | ||||||| ||||||||||| || ||| | | |||||| | ||||||||| Sbjct: 1513 ccatgtaccccctgcaaacttccacctgaaattgttgatatatctgagaaattccgggca 1572 Query: 268 cactaccttggcacgcacaatggcaggaggttgacatggcagacaaatatggggaatgca 327 |||||||||||| |||||||||||||| ||||||||||| ||||| |||||||||||| Sbjct: 1573 ttctaccttggcacccacaatggcaggagattgacatggcaaacaaacatggggaatgca 1632 Query: 328 gacattaaggcaacatttggagaccggaagcatgagctaaatgtctcaacttaccagatg 387 || || || ||||| || |||| ||| | ||||||| | |||||||| || || |||||| Sbjct: 1633 gatatcaaagcaacgttcggaggccgcaggcatgagttgaatgtctcgacatatcagatg 1692 Query: 388 tgtgtcctgatgctatttaactcaacagatactctgacctacaaggaaattgagcaggcc 447 |||||||||||||| ||||| ||| ||||| |||| ||| || |||||||||||| Sbjct: 1693 tgtgtcctgatgctgtttaattcagcagatggcttgacttacggtgacattgagcaggcc 1752 Query: 448 acagccataccatctgttgatctgaagcgctgcctccagtctctggcttgtgtgaagggc 507 |||| |||||| || ||||||||| ||||||||||||||||| |||||||| ||||| Sbjct: 1753 acaggtataccacatgctgatctgaaacgctgcctccagtctcttgcttgtgttaagggt 1812 Query: 508 aagaacgtactgcggaaggagcccatgagcaaggatatatctgatagcgactctttccac 567 ||||| || ||||||||||| ||||||||||||||||||||||| ||| ||||| || Sbjct: 1813 aagaatgtgctgcggaaggaacccatgagcaaggatatatctgaagatgacactttctac 1872 Query: 568 ttcaacgacaagtttaccagcaagtt 593 | ||| |||||||| || |||||||| Sbjct: 1873 tacaatgacaagttcacaagcaagtt 1898
>emb|AL731607.3|OSJN00250 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0063C18, complete sequence Length = 150416 Score = 416 bits (210), Expect = e-113 Identities = 477/566 (84%) Strand = Plus / Plus Query: 28 atgcttgtgaagctgaagactgaatgtggctaccagtttacctcaaagttggaaagcatg 87 |||||||||||||||||||| |||||||||||||||||||| ||||| |||||| ||||| Sbjct: 123032 atgcttgtgaagctgaagacggaatgtggctaccagtttacgtcaaaattggaaggcatg 123091 Query: 88 ttcactgatttgaagacgtctcaggatacgatgcaaagtttctatgccaatcttgctggt 147 |||| |||| ||||||| || || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 123092 ttcaatgatctgaagacatcgcatgatactatgcaaagtttttatgctaatctctctggt 123151 Query: 148 gacgttgatggcccaactatatctgtccagatactcaccactggatcctggccaacacaa 207 || |||| ||||||| ||||| |||||||||||||||||||| || ||||||||||| Sbjct: 123152 gatactgatagcccaacaatatcagtccagatactcaccactgggtcttggccaacacag 123211 Query: 208 ccatgcgctacctgcaatcttccacctgagatccttgttgtttctgagcagttccgggca 267 ||||| | ||||||| ||||||||||| || ||| | | |||||| | ||||||||| Sbjct: 123212 ccatgtaccccctgcaaacttccacctgaaattgttgatatatctgagaaattccgggca 123271 Query: 268 cactaccttggcacgcacaatggcaggaggttgacatggcagacaaatatggggaatgca 327 |||||||||||| |||||||||||||| ||||||||||| ||||| |||||||||||| Sbjct: 123272 ttctaccttggcacccacaatggcaggagattgacatggcaaacaaacatggggaatgca 123331 Query: 328 gacattaaggcaacatttggagaccggaagcatgagctaaatgtctcaacttaccagatg 387 || || || ||||| || |||| ||| | ||||||| | |||||||| || || |||||| Sbjct: 123332 gatatcaaagcaacgttcggaggccgcaggcatgagttgaatgtctcgacatatcagatg 123391 Query: 388 tgtgtcctgatgctatttaactcaacagatactctgacctacaaggaaattgagcaggcc 447 |||||||||||||| ||||| ||| ||||| |||| ||| || |||||||||||| Sbjct: 123392 tgtgtcctgatgctgtttaattcagcagatggcttgacttacggtgacattgagcaggcc 123451 Query: 448 acagccataccatctgttgatctgaagcgctgcctccagtctctggcttgtgtgaagggc 507 |||| |||||| || ||||||||| ||||||||||||||||| |||||||| ||||| Sbjct: 123452 acaggtataccacatgctgatctgaaacgctgcctccagtctcttgcttgtgttaagggt 123511 Query: 508 aagaacgtactgcggaaggagcccatgagcaaggatatatctgatagcgactctttccac 567 ||||| || ||||||||||| ||||||||||||||||||||||| ||| ||||| || Sbjct: 123512 aagaatgtgctgcggaaggaacccatgagcaaggatatatctgaagatgacactttctac 123571 Query: 568 ttcaacgacaagtttaccagcaagtt 593 | ||| |||||||| || |||||||| Sbjct: 123572 tacaatgacaagttcacaagcaagtt 123597
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 416 bits (210), Expect = e-113 Identities = 477/566 (84%) Strand = Plus / Plus Query: 28 atgcttgtgaagctgaagactgaatgtggctaccagtttacctcaaagttggaaagcatg 87 |||||||||||||||||||| |||||||||||||||||||| ||||| |||||| ||||| Sbjct: 32763599 atgcttgtgaagctgaagacggaatgtggctaccagtttacgtcaaaattggaaggcatg 32763658 Query: 88 ttcactgatttgaagacgtctcaggatacgatgcaaagtttctatgccaatcttgctggt 147 |||| |||| ||||||| || || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 32763659 ttcaatgatctgaagacatcgcatgatactatgcaaagtttttatgctaatctctctggt 32763718 Query: 148 gacgttgatggcccaactatatctgtccagatactcaccactggatcctggccaacacaa 207 || |||| ||||||| ||||| |||||||||||||||||||| || ||||||||||| Sbjct: 32763719 gatactgatagcccaacaatatcagtccagatactcaccactgggtcttggccaacacag 32763778 Query: 208 ccatgcgctacctgcaatcttccacctgagatccttgttgtttctgagcagttccgggca 267 ||||| | ||||||| ||||||||||| || ||| | | |||||| | ||||||||| Sbjct: 32763779 ccatgtaccccctgcaaacttccacctgaaattgttgatatatctgagaaattccgggca 32763838 Query: 268 cactaccttggcacgcacaatggcaggaggttgacatggcagacaaatatggggaatgca 327 |||||||||||| |||||||||||||| ||||||||||| ||||| |||||||||||| Sbjct: 32763839 ttctaccttggcacccacaatggcaggagattgacatggcaaacaaacatggggaatgca 32763898 Query: 328 gacattaaggcaacatttggagaccggaagcatgagctaaatgtctcaacttaccagatg 387 || || || ||||| || |||| ||| | ||||||| | |||||||| || || |||||| Sbjct: 32763899 gatatcaaagcaacgttcggaggccgcaggcatgagttgaatgtctcgacatatcagatg 32763958 Query: 388 tgtgtcctgatgctatttaactcaacagatactctgacctacaaggaaattgagcaggcc 447 |||||||||||||| ||||| ||| ||||| |||| ||| || |||||||||||| Sbjct: 32763959 tgtgtcctgatgctgtttaattcagcagatggcttgacttacggtgacattgagcaggcc 32764018 Query: 448 acagccataccatctgttgatctgaagcgctgcctccagtctctggcttgtgtgaagggc 507 |||| |||||| || ||||||||| ||||||||||||||||| |||||||| ||||| Sbjct: 32764019 acaggtataccacatgctgatctgaaacgctgcctccagtctcttgcttgtgttaagggt 32764078 Query: 508 aagaacgtactgcggaaggagcccatgagcaaggatatatctgatagcgactctttccac 567 ||||| || ||||||||||| ||||||||||||||||||||||| ||| ||||| || Sbjct: 32764079 aagaatgtgctgcggaaggaacccatgagcaaggatatatctgaagatgacactttctac 32764138 Query: 568 ttcaacgacaagtttaccagcaagtt 593 | ||| |||||||| || |||||||| Sbjct: 32764139 tacaatgacaagttcacaagcaagtt 32764164
>emb|AL606454.3|OSJN00009 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G05, complete sequence Length = 142556 Score = 416 bits (210), Expect = e-113 Identities = 477/566 (84%) Strand = Plus / Plus Query: 28 atgcttgtgaagctgaagactgaatgtggctaccagtttacctcaaagttggaaagcatg 87 |||||||||||||||||||| |||||||||||||||||||| ||||| |||||| ||||| Sbjct: 25889 atgcttgtgaagctgaagacggaatgtggctaccagtttacgtcaaaattggaaggcatg 25948 Query: 88 ttcactgatttgaagacgtctcaggatacgatgcaaagtttctatgccaatcttgctggt 147 |||| |||| ||||||| || || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 25949 ttcaatgatctgaagacatcgcatgatactatgcaaagtttttatgctaatctctctggt 26008 Query: 148 gacgttgatggcccaactatatctgtccagatactcaccactggatcctggccaacacaa 207 || |||| ||||||| ||||| |||||||||||||||||||| || ||||||||||| Sbjct: 26009 gatactgatagcccaacaatatcagtccagatactcaccactgggtcttggccaacacag 26068 Query: 208 ccatgcgctacctgcaatcttccacctgagatccttgttgtttctgagcagttccgggca 267 ||||| | ||||||| ||||||||||| || ||| | | |||||| | ||||||||| Sbjct: 26069 ccatgtaccccctgcaaacttccacctgaaattgttgatatatctgagaaattccgggca 26128 Query: 268 cactaccttggcacgcacaatggcaggaggttgacatggcagacaaatatggggaatgca 327 |||||||||||| |||||||||||||| ||||||||||| ||||| |||||||||||| Sbjct: 26129 ttctaccttggcacccacaatggcaggagattgacatggcaaacaaacatggggaatgca 26188 Query: 328 gacattaaggcaacatttggagaccggaagcatgagctaaatgtctcaacttaccagatg 387 || || || ||||| || |||| ||| | ||||||| | |||||||| || || |||||| Sbjct: 26189 gatatcaaagcaacgttcggaggccgcaggcatgagttgaatgtctcgacatatcagatg 26248 Query: 388 tgtgtcctgatgctatttaactcaacagatactctgacctacaaggaaattgagcaggcc 447 |||||||||||||| ||||| ||| ||||| |||| ||| || |||||||||||| Sbjct: 26249 tgtgtcctgatgctgtttaattcagcagatggcttgacttacggtgacattgagcaggcc 26308 Query: 448 acagccataccatctgttgatctgaagcgctgcctccagtctctggcttgtgtgaagggc 507 |||| |||||| || ||||||||| ||||||||||||||||| |||||||| ||||| Sbjct: 26309 acaggtataccacatgctgatctgaaacgctgcctccagtctcttgcttgtgttaagggt 26368 Query: 508 aagaacgtactgcggaaggagcccatgagcaaggatatatctgatagcgactctttccac 567 ||||| || ||||||||||| ||||||||||||||||||||||| ||| ||||| || Sbjct: 26369 aagaatgtgctgcggaaggaacccatgagcaaggatatatctgaagatgacactttctac 26428 Query: 568 ttcaacgacaagtttaccagcaagtt 593 | ||| |||||||| || |||||||| Sbjct: 26429 tacaatgacaagttcacaagcaagtt 26454
>dbj|AK069061.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008J21, full insert sequence Length = 2584 Score = 408 bits (206), Expect = e-111 Identities = 476/566 (84%) Strand = Plus / Plus Query: 28 atgcttgtgaagctgaagactgaatgtggctaccagtttacctcaaagttggaaagcatg 87 |||||||||||||||||||| |||||||||||||||||||| ||||| |||||| ||||| Sbjct: 1511 atgcttgtgaagctgaagacggaatgtggctaccagtttacgtcaaaattggaaggcatg 1570 Query: 88 ttcactgatttgaagacgtctcaggatacgatgcaaagtttctatgccaatcttgctggt 147 |||| |||| ||||||| || || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 1571 ttcaatgatctgaagacatcgcatgatactatgcaaagtttttatgctaatctctctggt 1630 Query: 148 gacgttgatggcccaactatatctgtccagatactcaccactggatcctggccaacacaa 207 || |||| ||||||| ||||| |||||||||||||||||| | || ||||||||||| Sbjct: 1631 gatactgatagcccaacaatatcagtccagatactcaccacttggtcttggccaacacag 1690 Query: 208 ccatgcgctacctgcaatcttccacctgagatccttgttgtttctgagcagttccgggca 267 ||||| | ||||||| ||||||||||| || ||| | | |||||| | ||||||||| Sbjct: 1691 ccatgtaccccctgcaaacttccacctgaaattgttgatatatctgagaaattccgggca 1750 Query: 268 cactaccttggcacgcacaatggcaggaggttgacatggcagacaaatatggggaatgca 327 |||||||||||| |||||||||||||| ||||||||||| ||||| |||||||||||| Sbjct: 1751 ttctaccttggcacccacaatggcaggagattgacatggcaaacaaacatggggaatgca 1810 Query: 328 gacattaaggcaacatttggagaccggaagcatgagctaaatgtctcaacttaccagatg 387 || || || ||||| || |||| ||| | ||||||| | |||||||| || || |||||| Sbjct: 1811 gatatcaaagcaacgttcggaggccgcaggcatgagttgaatgtctcgacatatcagatg 1870 Query: 388 tgtgtcctgatgctatttaactcaacagatactctgacctacaaggaaattgagcaggcc 447 |||||||||||||| ||||| ||| ||||| |||| ||| || |||||||||||| Sbjct: 1871 tgtgtcctgatgctgtttaattcagcagatggcttgacttacggtgacattgagcaggcc 1930 Query: 448 acagccataccatctgttgatctgaagcgctgcctccagtctctggcttgtgtgaagggc 507 |||| |||||| || ||||||||| ||||||||||||||||| |||||||| ||||| Sbjct: 1931 acaggtataccacatgctgatctgaaacgctgcctccagtctcttgcttgtgttaagggt 1990 Query: 508 aagaacgtactgcggaaggagcccatgagcaaggatatatctgatagcgactctttccac 567 ||||| || ||||||||||| ||||||||||||||||||||||| ||| ||||| || Sbjct: 1991 aagaatgtgctgcggaaggaacccatgagcaaggatatatctgaagatgacactttctac 2050 Query: 568 ttcaacgacaagtttaccagcaagtt 593 | ||| |||||||| || |||||||| Sbjct: 2051 tacaatgacaagttcacaagcaagtt 2076
>emb|AL732332.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0306F03, complete sequence Length = 91539 Score = 408 bits (206), Expect = e-111 Identities = 476/566 (84%) Strand = Plus / Plus Query: 28 atgcttgtgaagctgaagactgaatgtggctaccagtttacctcaaagttggaaagcatg 87 |||||||||||||||||||| |||||||||||||||||||| ||||| |||||| ||||| Sbjct: 33849 atgcttgtgaagctgaagacggaatgtggctaccagtttacgtcaaaattggaaggcatg 33908 Query: 88 ttcactgatttgaagacgtctcaggatacgatgcaaagtttctatgccaatcttgctggt 147 |||| |||| | ||||| || || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 33909 ttcaatgatctaaagacatcgcatgatactatgcaaagtttttatgctaatctctctggt 33968 Query: 148 gacgttgatggcccaactatatctgtccagatactcaccactggatcctggccaacacaa 207 || |||| ||||||| ||||| |||||||||||||||||||| || ||||||||||| Sbjct: 33969 gatactgatagcccaacaatatcagtccagatactcaccactgggtcttggccaacacag 34028 Query: 208 ccatgcgctacctgcaatcttccacctgagatccttgttgtttctgagcagttccgggca 267 ||||| | ||||||| ||||||||||| || ||| | | |||||| | ||||||||| Sbjct: 34029 ccatgtaccccctgcaaacttccacctgaaattgttgatatatctgagaaattccgggca 34088 Query: 268 cactaccttggcacgcacaatggcaggaggttgacatggcagacaaatatggggaatgca 327 |||||||||||| |||||||||||||| ||||||||||| ||||| |||||||||||| Sbjct: 34089 ttctaccttggcacccacaatggcaggagattgacatggcaaacaaacatggggaatgca 34148 Query: 328 gacattaaggcaacatttggagaccggaagcatgagctaaatgtctcaacttaccagatg 387 || || || ||||| || |||| ||| | ||||||| | |||||||| || || |||||| Sbjct: 34149 gatatcaaagcaacgttcggaggccgcaggcatgagttgaatgtctcgacatatcagatg 34208 Query: 388 tgtgtcctgatgctatttaactcaacagatactctgacctacaaggaaattgagcaggcc 447 |||||||||||||| ||||| ||| ||||| |||| ||| || |||||||||||| Sbjct: 34209 tgtgtcctgatgctgtttaattcagcagatggcttgacttacggtgacattgagcaggcc 34268 Query: 448 acagccataccatctgttgatctgaagcgctgcctccagtctctggcttgtgtgaagggc 507 |||| |||||| || ||||||||| ||||||||||||||||| |||||||| ||||| Sbjct: 34269 acaggtataccacatgctgatctgaaacgctgcctccagtctcttgcttgtgttaagggt 34328 Query: 508 aagaacgtactgcggaaggagcccatgagcaaggatatatctgatagcgactctttccac 567 ||||| || ||||||||||| ||||||||||||||||||||||| ||| ||||| || Sbjct: 34329 aagaatgtgctgcggaaggaacccatgagcaaggatatatctgaagatgacactttctac 34388 Query: 568 ttcaacgacaagtttaccagcaagtt 593 | ||| |||||||| || |||||||| Sbjct: 34389 tacaatgacaagttcacaagcaagtt 34414
>gb|AY111946.1| Zea mays CL296_1 mRNA sequence Length = 1397 Score = 115 bits (58), Expect = 2e-22 Identities = 82/90 (91%) Strand = Plus / Plus Query: 27 catgcttgtgaagctgaagactgaatgtggctaccagtttacctcaaagttggaaagcat 86 ||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||| Sbjct: 238 catgcttgtgaagctgaagacggaatgtggctaccagttcacttcaaagttggagggcat 297 Query: 87 gttcactgatttgaagacgtctcaggatac 116 | ||||||||||||| || ||||||||||| Sbjct: 298 gatcactgatttgaatacctctcaggatac 327 Score = 111 bits (56), Expect = 3e-21 Identities = 223/278 (80%), Gaps = 3/278 (1%) Strand = Plus / Plus Query: 271 taccttggcacgcacaatggcaggaggttgacatggcagacaaatatggggaatgcagac 330 ||||||||||| || |||||||||||| | |||||||| ||||| ||||||||||| ||| Sbjct: 488 taccttggcacacataatggcaggaggctaacatggcaaacaaacatggggaatgctgac 547 Query: 331 attaaggcaacatttgga---gaccggaagcatgagctaaatgtctcaacttaccagatg 387 || || |||||||||||| | | |||||||| || || |||||||| ||||||||| Sbjct: 548 atcaaagcaacatttggaaatggcaacaagcatgaactgaacgtctcaacataccagatg 607 Query: 388 tgtgtcctgatgctatttaactcaacagatactctgacctacaaggaaattgagcaggcc 447 ||||| || ||||| ||||| ||| || || |||| ||| |||||||||||| | Sbjct: 608 tgtgttctcatgctgtttaattcatcaaatgtcttgacttaccgtgaaattgagcagtct 667 Query: 448 acagccataccatctgttgatctgaagcgctgcctccagtctctggcttgtgtgaagggc 507 ||||| |||||| ||| ||| ||||||| ||||||| ||| || ||| ||||||||| Sbjct: 668 acagcaataccaactgctgacttgaagcgatgcctcctgtcgctagctcttgtgaagggt 727 Query: 508 aagaacgtactgcggaaggagcccatgagcaaggatat 545 | | || ||||| || |||||||||||||||||||| Sbjct: 728 agacaagtcctgcgaaaagagcccatgagcaaggatat 765 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 166 atatctgtccagatactcaccactggatcctggccaacaca 206 ||||||||||| |||||||||||||| || ||| ||||||| Sbjct: 383 atatctgtccatatactcaccactgggtcatggtcaacaca 423
>ref|XM_480292.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2507 Score = 109 bits (55), Expect = 1e-20 Identities = 148/179 (82%) Strand = Plus / Plus Query: 154 gatggcccaactatatctgtccagatactcaccactggatcctggccaacacaaccatgc 213 |||| ||| ||||||||||||||||||||||||||||| || ||||| ||||||||||| Sbjct: 1669 gatgcccctactatatctgtccagatactcaccactgggtcttggcccacacaaccatgt 1728 Query: 214 gctacctgcaatcttccacctgagatccttgttgtttctgagcagttccgggcacactac 273 |||||||| ||||| |||||||| |||| || || ||| ||| |||| |||| Sbjct: 1729 aacacctgcaaccttcctcctgagattcttggcgtgtccgagatgtttcggggtttctac 1788 Query: 274 cttggcacgcacaatggcaggaggttgacatggcagacaaatatggggaatgcagacat 332 ||||| || |||||||||||||| |||||||||| ||||| ||||| | ||||||||| Sbjct: 1789 cttggtacccacaatggcaggagactgacatggcaaacaaacatgggtactgcagacat 1847 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 28 atgcttgtgaagctgaagactgaatgtggctaccagtttacctcaaagttggaaagcatg 87 |||||||||||||| ||||| |||||||| || ||||| || ||||| ||||| ||||| Sbjct: 1543 atgcttgtgaagctcaagacagaatgtggatatcagttcacttcaaaattggagggcatg 1602 Query: 88 ttcactgatttgaagacgtctcaggatac 116 |||| |||||||||||| ||||| ||||| Sbjct: 1603 ttcaatgatttgaagacctctcatgatac 1631 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 439 gagcaggccacagccataccatctgttgatctgaagcgctgcctccagtctctggcttgt 498 |||||| | ||||| |||||||| | || |||||||||||||| |||||||| || | Sbjct: 1957 gagcagactacagcgataccatccgcggacctgaagcgctgccttcagtctctcgcgctt 2016 Query: 499 gtgaagggcaagaacgtactgcggaaggagcccatgagca 538 ||||||||||||||||| ||||| ||||| || ||||||| Sbjct: 2017 gtgaagggcaagaacgttctgcgcaaggaacctatgagca 2056
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 109 bits (55), Expect = 1e-20 Identities = 148/179 (82%) Strand = Plus / Minus Query: 154 gatggcccaactatatctgtccagatactcaccactggatcctggccaacacaaccatgc 213 |||| ||| ||||||||||||||||||||||||||||| || ||||| ||||||||||| Sbjct: 4147910 gatgcccctactatatctgtccagatactcaccactgggtcttggcccacacaaccatgt 4147851 Query: 214 gctacctgcaatcttccacctgagatccttgttgtttctgagcagttccgggcacactac 273 |||||||| ||||| |||||||| |||| || || ||| ||| |||| |||| Sbjct: 4147850 aacacctgcaaccttcctcctgagattcttggcgtgtccgagatgtttcggggtttctac 4147791 Query: 274 cttggcacgcacaatggcaggaggttgacatggcagacaaatatggggaatgcagacat 332 ||||| || |||||||||||||| |||||||||| ||||| ||||| | ||||||||| Sbjct: 4147790 cttggtacccacaatggcaggagactgacatggcaaacaaacatgggtactgcagacat 4147732 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 28 atgcttgtgaagctgaagactgaatgtggctaccagtttacctcaaagttggaaagcatg 87 |||||||||||||| ||||| |||||||| || ||||| || ||||| ||||| ||||| Sbjct: 4148036 atgcttgtgaagctcaagacagaatgtggatatcagttcacttcaaaattggagggcatg 4147977 Query: 88 ttcactgatttgaagacgtctcaggatac 116 |||| |||||||||||| ||||| ||||| Sbjct: 4147976 ttcaatgatttgaagacctctcatgatac 4147948 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Minus Query: 439 gagcaggccacagccataccatctgttgatctgaagcgctgcctccagtctctggcttgt 498 |||||| | ||||| |||||||| | || |||||||||||||| |||||||| || | Sbjct: 4147622 gagcagactacagcgataccatccgcggacctgaagcgctgccttcagtctctcgcgctt 4147563 Query: 499 gtgaagggcaagaacgtactgcggaaggagcccatgagca 538 ||||||||||||||||| ||||| ||||| || ||||||| Sbjct: 4147562 gtgaagggcaagaacgttctgcgcaaggaacctatgagca 4147523
>dbj|AP005606.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1590_E05 Length = 148205 Score = 109 bits (55), Expect = 1e-20 Identities = 148/179 (82%) Strand = Plus / Minus Query: 154 gatggcccaactatatctgtccagatactcaccactggatcctggccaacacaaccatgc 213 |||| ||| ||||||||||||||||||||||||||||| || ||||| ||||||||||| Sbjct: 47533 gatgcccctactatatctgtccagatactcaccactgggtcttggcccacacaaccatgt 47474 Query: 214 gctacctgcaatcttccacctgagatccttgttgtttctgagcagttccgggcacactac 273 |||||||| ||||| |||||||| |||| || || ||| ||| |||| |||| Sbjct: 47473 aacacctgcaaccttcctcctgagattcttggcgtgtccgagatgtttcggggtttctac 47414 Query: 274 cttggcacgcacaatggcaggaggttgacatggcagacaaatatggggaatgcagacat 332 ||||| || |||||||||||||| |||||||||| ||||| ||||| | ||||||||| Sbjct: 47413 cttggtacccacaatggcaggagactgacatggcaaacaaacatgggtactgcagacat 47355 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 28 atgcttgtgaagctgaagactgaatgtggctaccagtttacctcaaagttggaaagcatg 87 |||||||||||||| ||||| |||||||| || ||||| || ||||| ||||| ||||| Sbjct: 47659 atgcttgtgaagctcaagacagaatgtggatatcagttcacttcaaaattggagggcatg 47600 Query: 88 ttcactgatttgaagacgtctcaggatac 116 |||| |||||||||||| ||||| ||||| Sbjct: 47599 ttcaatgatttgaagacctctcatgatac 47571 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Minus Query: 439 gagcaggccacagccataccatctgttgatctgaagcgctgcctccagtctctggcttgt 498 |||||| | ||||| |||||||| | || |||||||||||||| |||||||| || | Sbjct: 47245 gagcagactacagcgataccatccgcggacctgaagcgctgccttcagtctctcgcgctt 47186 Query: 499 gtgaagggcaagaacgtactgcggaaggagcccatgagca 538 ||||||||||||||||| ||||| ||||| || ||||||| Sbjct: 47185 gtgaagggcaagaacgttctgcgcaaggaacctatgagca 47146
>dbj|AP005501.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0458D06 Length = 166038 Score = 109 bits (55), Expect = 1e-20 Identities = 148/179 (82%) Strand = Plus / Minus Query: 154 gatggcccaactatatctgtccagatactcaccactggatcctggccaacacaaccatgc 213 |||| ||| ||||||||||||||||||||||||||||| || ||||| ||||||||||| Sbjct: 141023 gatgcccctactatatctgtccagatactcaccactgggtcttggcccacacaaccatgt 140964 Query: 214 gctacctgcaatcttccacctgagatccttgttgtttctgagcagttccgggcacactac 273 |||||||| ||||| |||||||| |||| || || ||| ||| |||| |||| Sbjct: 140963 aacacctgcaaccttcctcctgagattcttggcgtgtccgagatgtttcggggtttctac 140904 Query: 274 cttggcacgcacaatggcaggaggttgacatggcagacaaatatggggaatgcagacat 332 ||||| || |||||||||||||| |||||||||| ||||| ||||| | ||||||||| Sbjct: 140903 cttggtacccacaatggcaggagactgacatggcaaacaaacatgggtactgcagacat 140845 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 28 atgcttgtgaagctgaagactgaatgtggctaccagtttacctcaaagttggaaagcatg 87 |||||||||||||| ||||| |||||||| || ||||| || ||||| ||||| ||||| Sbjct: 141149 atgcttgtgaagctcaagacagaatgtggatatcagttcacttcaaaattggagggcatg 141090 Query: 88 ttcactgatttgaagacgtctcaggatac 116 |||| |||||||||||| ||||| ||||| Sbjct: 141089 ttcaatgatttgaagacctctcatgatac 141061 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Minus Query: 439 gagcaggccacagccataccatctgttgatctgaagcgctgcctccagtctctggcttgt 498 |||||| | ||||| |||||||| | || |||||||||||||| |||||||| || | Sbjct: 140735 gagcagactacagcgataccatccgcggacctgaagcgctgccttcagtctctcgcgctt 140676 Query: 499 gtgaagggcaagaacgtactgcggaaggagcccatgagca 538 ||||||||||||||||| ||||| ||||| || ||||||| Sbjct: 140675 gtgaagggcaagaacgttctgcgcaaggaacctatgagca 140636
>dbj|AK066234.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058A05, full insert sequence Length = 2506 Score = 109 bits (55), Expect = 1e-20 Identities = 148/179 (82%) Strand = Plus / Plus Query: 154 gatggcccaactatatctgtccagatactcaccactggatcctggccaacacaaccatgc 213 |||| ||| ||||||||||||||||||||||||||||| || ||||| ||||||||||| Sbjct: 1668 gatgcccctactatatctgtccagatactcaccactgggtcttggcccacacaaccatgt 1727 Query: 214 gctacctgcaatcttccacctgagatccttgttgtttctgagcagttccgggcacactac 273 |||||||| ||||| |||||||| |||| || || ||| ||| |||| |||| Sbjct: 1728 aacacctgcaaccttcctcctgagattcttggcgtgtccgagatgtttcggggtttctac 1787 Query: 274 cttggcacgcacaatggcaggaggttgacatggcagacaaatatggggaatgcagacat 332 ||||| || |||||||||||||| |||||||||| ||||| ||||| | ||||||||| Sbjct: 1788 cttggtacccacaatggcaggagactgacatggcaaacaaacatgggtactgcagacat 1846 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 28 atgcttgtgaagctgaagactgaatgtggctaccagtttacctcaaagttggaaagcatg 87 ||||||| |||||| ||||| |||||||| || ||||| || ||||| ||||| ||||| Sbjct: 1542 atgcttgcgaagctcaagacagaatgtggatatcagttcacttcaaaattggagggcatg 1601 Query: 88 ttcactgatttgaagacgtctcaggatac 116 |||| |||||||||||| ||||| ||||| Sbjct: 1602 ttcaatgatttgaagacctctcatgatac 1630 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 439 gagcaggccacagccataccatctgttgatctgaagcgctgcctccagtctctggcttgt 498 |||||| | ||||| |||||||| | || |||||||||||||| |||||||| || | Sbjct: 1956 gagcagactacagcgataccatccgcggacctgaagcgctgccttcagtctctcgcgctt 2015 Query: 499 gtgaagggcaagaacgtactgcggaaggagcccatgagca 538 ||||||||||||||||| ||||| ||||| || ||||||| Sbjct: 2016 gtgaagggcaagaacgttctgcgcaaggaacctatgagca 2055
>dbj|AK061805.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-A02, full insert sequence Length = 1078 Score = 109 bits (55), Expect = 1e-20 Identities = 148/179 (82%) Strand = Plus / Plus Query: 154 gatggcccaactatatctgtccagatactcaccactggatcctggccaacacaaccatgc 213 |||| ||| ||||||||||||||||||||||||||||| || ||||| ||||||||||| Sbjct: 240 gatgcccctactatatctgtccagatactcaccactgggtcttggcccacacaaccatgt 299 Query: 214 gctacctgcaatcttccacctgagatccttgttgtttctgagcagttccgggcacactac 273 |||||||| ||||| |||||||| |||| || || ||| ||| |||| |||| Sbjct: 300 aacacctgcaaccttcctcctgagattcttggcgtgtccgagatgtttcggggtttctac 359 Query: 274 cttggcacgcacaatggcaggaggttgacatggcagacaaatatggggaatgcagacat 332 ||||| || |||||||||||||| |||||||||| ||||| ||||| | ||||||||| Sbjct: 360 cttggtacccacaatggcaggagactgacatggcaaacaaacatgggtactgcagacat 418 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 28 atgcttgtgaagctgaagactgaatgtggctaccagtttacctcaaagttggaaagcatg 87 |||||||||||||| ||||| |||||||| || ||||| || ||||| ||||| ||||| Sbjct: 114 atgcttgtgaagctcaagacagaatgtggatatcagttcacttcaaaattggagggcatg 173 Query: 88 ttcactgatttgaagacgtctcaggatac 116 |||| |||||||||||| ||||| ||||| Sbjct: 174 ttcaatgatttgaagacctctcatgatac 202 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 439 gagcaggccacagccataccatctgttgatctgaagcgctgcctccagtctctggcttgt 498 |||||| | ||||| |||||||| | || |||||||||||||| |||||||| || | Sbjct: 528 gagcagactacagcgataccatccgcggacctgaagcgctgccttcagtctctcgcgctt 587 Query: 499 gtgaagggcaagaacgtactgcggaaggagcccatgagca 538 ||||||||||||||||| ||||| ||||| || ||||||| Sbjct: 588 gtgaagggcaagaacgttctgcgcaaggaacctatgagca 627
>ref|NM_189710.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1350 Score = 95.6 bits (48), Expect = 2e-16 Identities = 100/116 (86%), Gaps = 1/116 (0%) Strand = Plus / Plus Query: 436 attgagcaggccacagccataccatctgttgatctgaagcgctgcctccagtctctggct 495 |||||||||||||| | |||||| || ||||||||| ||||||||||||||||| ||| Sbjct: 136 attgagcaggccactggtataccacatgctgatctgaaacgctgcctccagtctcttgct 195 Query: 496 tgtgtgaagggcaagaacgtactgcggaaggagcccatgagcaaggatatatctga 551 ||||| ||| | ||||| || |||||||||| ||||||||||| ||||||||||| Sbjct: 196 tgtgttaagagtaagaatgtgttgcggaaggaacccatgagcaa-gatatatctga 250
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 95.6 bits (48), Expect = 2e-16 Identities = 100/116 (86%), Gaps = 1/116 (0%) Strand = Plus / Plus Query: 436 attgagcaggccacagccataccatctgttgatctgaagcgctgcctccagtctctggct 495 |||||||||||||| | |||||| || ||||||||| ||||||||||||||||| ||| Sbjct: 41344050 attgagcaggccactggtataccacatgctgatctgaaacgctgcctccagtctcttgct 41344109 Query: 496 tgtgtgaagggcaagaacgtactgcggaaggagcccatgagcaaggatatatctga 551 ||||| ||| | ||||| || |||||||||| ||||||||||| ||||||||||| Sbjct: 41344110 tgtgttaagagtaagaatgtgttgcggaaggaacccatgagcaa-gatatatctga 41344164
>dbj|AP004031.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0432C03 Length = 164394 Score = 95.6 bits (48), Expect = 2e-16 Identities = 100/116 (86%), Gaps = 1/116 (0%) Strand = Plus / Plus Query: 436 attgagcaggccacagccataccatctgttgatctgaagcgctgcctccagtctctggct 495 |||||||||||||| | |||||| || ||||||||| ||||||||||||||||| ||| Sbjct: 35543 attgagcaggccactggtataccacatgctgatctgaaacgctgcctccagtctcttgct 35602 Query: 496 tgtgtgaagggcaagaacgtactgcggaaggagcccatgagcaaggatatatctga 551 ||||| ||| | ||||| || |||||||||| ||||||||||| ||||||||||| Sbjct: 35603 tgtgttaagagtaagaatgtgttgcggaaggaacccatgagcaa-gatatatctga 35657
>ref|XM_467770.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2534 Score = 83.8 bits (42), Expect = 6e-13 Identities = 179/224 (79%), Gaps = 3/224 (1%) Strand = Plus / Plus Query: 187 actggatcctggccaacacaaccatgcgctacctgcaatcttccacctgagatccttgtt 246 ||||| || ||||||||||| || ||| || ||||||| |||||| |||| ||||||| Sbjct: 1601 actggttcttggccaacacagccctgccctccctgcaaccttccaactgaaatccttgca 1660 Query: 247 gtttctgagcagttccgggcacactaccttggcacgcacaatggcaggaggttgacatgg 306 | | ||| |||||||| || |||||||||| || |||| |||| |||| ||||||||| Sbjct: 1661 atatgtgataagttccggacatactaccttggaactcacagtggccggagattgacatgg 1720 Query: 307 cagacaaatatggggaatgcagacattaaggcaacatttgg---agaccggaagcatgag 363 || ||||| ||||| | || ||||| || || |||||||| || | ||||||||| Sbjct: 1721 caaacaaacatgggaacagctgacataaaagccacatttgggaaaggtcagaagcatgaa 1780 Query: 364 ctaaatgtctcaacttaccagatgtgtgtcctgatgctatttaa 407 |||||||| || ||||| ||||||||||| || ||||| ||||| Sbjct: 1781 ctaaatgtatccacttatcagatgtgtgttctcatgctgtttaa 1824 Score = 60.0 bits (30), Expect = 9e-06 Identities = 93/114 (81%) Strand = Plus / Plus Query: 478 tgcctccagtctctggcttgtgtgaagggcaagaacgtactgcggaaggagcccatgagc 537 ||||| || ||||| |||||||| ||||| ||||| || || || ||||| ||||||||| Sbjct: 1895 tgccttcaatctcttgcttgtgtcaaggggaagaatgttctccgcaaggaacccatgagc 1954 Query: 538 aaggatatatctgatagcgactctttccacttcaacgacaagtttaccagcaag 591 || |||||||| || ||| | ||| |||||||||||||||| || |||||| Sbjct: 1955 aaagatatatcggaggatgacacattctacttcaacgacaagttcacaagcaag 2008 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 43 aagactgaatgtggctaccagtttacctcaaagttggaaagcatgttcactgatttgaag 102 ||||| |||||||| |||||||| || || || || || ||||||||||||| ||||| Sbjct: 1454 aagacagaatgtgggtaccagttcacttccaaattagagggcatgttcactgacatgaag 1513 Query: 103 acgtctcagga 113 || |||||||| Sbjct: 1514 acctctcagga 1524
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 83.8 bits (42), Expect = 6e-13 Identities = 179/224 (79%), Gaps = 3/224 (1%) Strand = Plus / Minus Query: 187 actggatcctggccaacacaaccatgcgctacctgcaatcttccacctgagatccttgtt 246 ||||| || ||||||||||| || ||| || ||||||| |||||| |||| ||||||| Sbjct: 31329180 actggttcttggccaacacagccctgccctccctgcaaccttccaactgaaatccttgca 31329121 Query: 247 gtttctgagcagttccgggcacactaccttggcacgcacaatggcaggaggttgacatgg 306 | | ||| |||||||| || |||||||||| || |||| |||| |||| ||||||||| Sbjct: 31329120 atatgtgataagttccggacatactaccttggaactcacagtggccggagattgacatgg 31329061 Query: 307 cagacaaatatggggaatgcagacattaaggcaacatttgg---agaccggaagcatgag 363 || ||||| ||||| | || ||||| || || |||||||| || | ||||||||| Sbjct: 31329060 caaacaaacatgggaacagctgacataaaagccacatttgggaaaggtcagaagcatgaa 31329001 Query: 364 ctaaatgtctcaacttaccagatgtgtgtcctgatgctatttaa 407 |||||||| || ||||| ||||||||||| || ||||| ||||| Sbjct: 31329000 ctaaatgtatccacttatcagatgtgtgttctcatgctgtttaa 31328957 Score = 60.0 bits (30), Expect = 9e-06 Identities = 93/114 (81%) Strand = Plus / Minus Query: 478 tgcctccagtctctggcttgtgtgaagggcaagaacgtactgcggaaggagcccatgagc 537 ||||| || ||||| |||||||| ||||| ||||| || || || ||||| ||||||||| Sbjct: 31328886 tgccttcaatctcttgcttgtgtcaaggggaagaatgttctccgcaaggaacccatgagc 31328827 Query: 538 aaggatatatctgatagcgactctttccacttcaacgacaagtttaccagcaag 591 || |||||||| || ||| | ||| |||||||||||||||| || |||||| Sbjct: 31328826 aaagatatatcggaggatgacacattctacttcaacgacaagttcacaagcaag 31328773 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Minus Query: 43 aagactgaatgtggctaccagtttacctcaaagttggaaagcatgttcactgatttgaag 102 ||||| |||||||| |||||||| || || || || || ||||||||||||| ||||| Sbjct: 31329327 aagacagaatgtgggtaccagttcacttccaaattagagggcatgttcactgacatgaag 31329268 Query: 103 acgtctcagga 113 || |||||||| Sbjct: 31329267 acctctcagga 31329257
>dbj|AP005733.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0024K03 Length = 119796 Score = 83.8 bits (42), Expect = 6e-13 Identities = 179/224 (79%), Gaps = 3/224 (1%) Strand = Plus / Minus Query: 187 actggatcctggccaacacaaccatgcgctacctgcaatcttccacctgagatccttgtt 246 ||||| || ||||||||||| || ||| || ||||||| |||||| |||| ||||||| Sbjct: 11754 actggttcttggccaacacagccctgccctccctgcaaccttccaactgaaatccttgca 11695 Query: 247 gtttctgagcagttccgggcacactaccttggcacgcacaatggcaggaggttgacatgg 306 | | ||| |||||||| || |||||||||| || |||| |||| |||| ||||||||| Sbjct: 11694 atatgtgataagttccggacatactaccttggaactcacagtggccggagattgacatgg 11635 Query: 307 cagacaaatatggggaatgcagacattaaggcaacatttgg---agaccggaagcatgag 363 || ||||| ||||| | || ||||| || || |||||||| || | ||||||||| Sbjct: 11634 caaacaaacatgggaacagctgacataaaagccacatttgggaaaggtcagaagcatgaa 11575 Query: 364 ctaaatgtctcaacttaccagatgtgtgtcctgatgctatttaa 407 |||||||| || ||||| ||||||||||| || ||||| ||||| Sbjct: 11574 ctaaatgtatccacttatcagatgtgtgttctcatgctgtttaa 11531 Score = 60.0 bits (30), Expect = 9e-06 Identities = 93/114 (81%) Strand = Plus / Minus Query: 478 tgcctccagtctctggcttgtgtgaagggcaagaacgtactgcggaaggagcccatgagc 537 ||||| || ||||| |||||||| ||||| ||||| || || || ||||| ||||||||| Sbjct: 11460 tgccttcaatctcttgcttgtgtcaaggggaagaatgttctccgcaaggaacccatgagc 11401 Query: 538 aaggatatatctgatagcgactctttccacttcaacgacaagtttaccagcaag 591 || |||||||| || ||| | ||| |||||||||||||||| || |||||| Sbjct: 11400 aaagatatatcggaggatgacacattctacttcaacgacaagttcacaagcaag 11347 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Minus Query: 43 aagactgaatgtggctaccagtttacctcaaagttggaaagcatgttcactgatttgaag 102 ||||| |||||||| |||||||| || || || || || ||||||||||||| ||||| Sbjct: 11901 aagacagaatgtgggtaccagttcacttccaaattagagggcatgttcactgacatgaag 11842 Query: 103 acgtctcagga 113 || |||||||| Sbjct: 11841 acctctcagga 11831
>dbj|AP004114.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1118_G04 Length = 134464 Score = 83.8 bits (42), Expect = 6e-13 Identities = 179/224 (79%), Gaps = 3/224 (1%) Strand = Plus / Minus Query: 187 actggatcctggccaacacaaccatgcgctacctgcaatcttccacctgagatccttgtt 246 ||||| || ||||||||||| || ||| || ||||||| |||||| |||| ||||||| Sbjct: 99048 actggttcttggccaacacagccctgccctccctgcaaccttccaactgaaatccttgca 98989 Query: 247 gtttctgagcagttccgggcacactaccttggcacgcacaatggcaggaggttgacatgg 306 | | ||| |||||||| || |||||||||| || |||| |||| |||| ||||||||| Sbjct: 98988 atatgtgataagttccggacatactaccttggaactcacagtggccggagattgacatgg 98929 Query: 307 cagacaaatatggggaatgcagacattaaggcaacatttgg---agaccggaagcatgag 363 || ||||| ||||| | || ||||| || || |||||||| || | ||||||||| Sbjct: 98928 caaacaaacatgggaacagctgacataaaagccacatttgggaaaggtcagaagcatgaa 98869 Query: 364 ctaaatgtctcaacttaccagatgtgtgtcctgatgctatttaa 407 |||||||| || ||||| ||||||||||| || ||||| ||||| Sbjct: 98868 ctaaatgtatccacttatcagatgtgtgttctcatgctgtttaa 98825 Score = 60.0 bits (30), Expect = 9e-06 Identities = 93/114 (81%) Strand = Plus / Minus Query: 478 tgcctccagtctctggcttgtgtgaagggcaagaacgtactgcggaaggagcccatgagc 537 ||||| || ||||| |||||||| ||||| ||||| || || || ||||| ||||||||| Sbjct: 98754 tgccttcaatctcttgcttgtgtcaaggggaagaatgttctccgcaaggaacccatgagc 98695 Query: 538 aaggatatatctgatagcgactctttccacttcaacgacaagtttaccagcaag 591 || |||||||| || ||| | ||| |||||||||||||||| || |||||| Sbjct: 98694 aaagatatatcggaggatgacacattctacttcaacgacaagttcacaagcaag 98641 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Minus Query: 43 aagactgaatgtggctaccagtttacctcaaagttggaaagcatgttcactgatttgaag 102 ||||| |||||||| |||||||| || || || || || ||||||||||||| ||||| Sbjct: 99195 aagacagaatgtgggtaccagttcacttccaaattagagggcatgttcactgacatgaag 99136 Query: 103 acgtctcagga 113 || |||||||| Sbjct: 99135 acctctcagga 99125
>dbj|AK072402.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079J03, full insert sequence Length = 2535 Score = 83.8 bits (42), Expect = 6e-13 Identities = 179/224 (79%), Gaps = 3/224 (1%) Strand = Plus / Plus Query: 187 actggatcctggccaacacaaccatgcgctacctgcaatcttccacctgagatccttgtt 246 ||||| || ||||||||||| || ||| || ||||||| |||||| |||| ||||||| Sbjct: 1601 actggttcttggccaacacagccctgccctccctgcaaccttccaactgaaatccttgca 1660 Query: 247 gtttctgagcagttccgggcacactaccttggcacgcacaatggcaggaggttgacatgg 306 | | ||| |||||||| || |||||||||| || |||| |||| |||| ||||||||| Sbjct: 1661 atatgtgataagttccggacatactaccttggaactcacagtggccggagattgacatgg 1720 Query: 307 cagacaaatatggggaatgcagacattaaggcaacatttgg---agaccggaagcatgag 363 || ||||| ||||| | || ||||| || || |||||||| || | ||||||||| Sbjct: 1721 caaacaaacatgggaacagctgacataaaagccacatttgggaaaggtcagaagcatgaa 1780 Query: 364 ctaaatgtctcaacttaccagatgtgtgtcctgatgctatttaa 407 |||||||| || ||||| ||||||||||| || ||||| ||||| Sbjct: 1781 ctaaatgtatccacttatcagatgtgtgttctcatgctgtttaa 1824 Score = 60.0 bits (30), Expect = 9e-06 Identities = 93/114 (81%) Strand = Plus / Plus Query: 478 tgcctccagtctctggcttgtgtgaagggcaagaacgtactgcggaaggagcccatgagc 537 ||||| || ||||| |||||||| ||||| ||||| || || || ||||| ||||||||| Sbjct: 1895 tgccttcaatctcttgcttgtgtcaaggggaagaatgttctccgcaaggaacccatgagc 1954 Query: 538 aaggatatatctgatagcgactctttccacttcaacgacaagtttaccagcaag 591 || |||||||| || ||| | ||| |||||||||||||||| || |||||| Sbjct: 1955 aaagatatatcggaggatgacacattctacttcaacgacaagttcacaagcaag 2008 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 43 aagactgaatgtggctaccagtttacctcaaagttggaaagcatgttcactgatttgaag 102 ||||| |||||||| |||||||| || || || || || ||||||||||||| ||||| Sbjct: 1454 aagacagaatgtgggtaccagttcacttccaaattagagggcatgttcactgacatgaag 1513 Query: 103 acgtctcagga 113 || |||||||| Sbjct: 1514 acctctcagga 1524
>gb|BT018336.1| Zea mays clone EL01T0402H09.c mRNA sequence Length = 1303 Score = 77.8 bits (39), Expect = 4e-11 Identities = 125/153 (81%), Gaps = 3/153 (1%) Strand = Plus / Plus Query: 259 ttccgggcacactaccttggcacgcacaatggcaggaggttgacatggcagacaaatatg 318 ||||||||| | || ||||| || |||||||||||||| ||||||||||| ||||| ||| Sbjct: 381 ttccgggcatattatcttggaactcacaatggcaggagattgacatggcaaacaaacatg 440 Query: 319 gggaatgcagacattaaggcaacatttgg---agaccggaagcatgagctaaatgtctca 375 || | || || || || || |||||||| || || ||||||||| |||||||| || Sbjct: 441 ggtacagctgatataaaagccacatttggaaaaggccagaagcatgaactaaatgtatcc 500 Query: 376 acttaccagatgtgtgtcctgatgctatttaac 408 ||||| ||||||||||| || ||||| |||||| Sbjct: 501 acttatcagatgtgtgttctcatgctgtttaac 533 Score = 48.1 bits (24), Expect = 0.033 Identities = 57/68 (83%) Strand = Plus / Plus Query: 484 cagtctctggcttgtgtgaagggcaagaacgtactgcggaaggagcccatgagcaaggat 543 ||||| || |||||||| ||||| || || || || || |||||||| ||||||||||| Sbjct: 609 cagtcacttgcttgtgtcaaggggaaaaatgttctccgtaaggagcctatgagcaaggac 668 Query: 544 atatctga 551 |||||||| Sbjct: 669 atatctga 676 Score = 46.1 bits (23), Expect = 0.13 Identities = 77/95 (81%) Strand = Plus / Plus Query: 43 aagactgaatgtggctaccagtttacctcaaagttggaaagcatgttcactgatttgaag 102 ||||| |||||||| |||||||| || || ||| | || |||||||||||||| |||| Sbjct: 162 aagacagaatgtggataccagttcacttccaagctagagggcatgttcactgatatgaaa 221 Query: 103 acgtctcaggatacgatgcaaagtttctatgccaa 137 || || ||||| || |||||| ||||||||||| Sbjct: 222 acctcccaggacaccatgcaagacttctatgccaa 256
>gb|AY111672.1| Zea mays CL37763_1 mRNA sequence Length = 887 Score = 71.9 bits (36), Expect = 2e-09 Identities = 119/146 (81%), Gaps = 3/146 (2%) Strand = Plus / Plus Query: 259 ttccgggcacactaccttggcacgcacaatggcaggaggttgacatggcagacaaatatg 318 ||||||||| | || ||||| || |||||||||||||| ||||||||||| ||||| ||| Sbjct: 103 ttccgggcatattatcttggaactcacaatggcaggagattgacatggcaaacaaacatg 162 Query: 319 gggaatgcagacattaaggcaacatttgg---agaccggaagcatgagctaaatgtctca 375 || | || || || || || |||||||| || || ||||||||| |||||||| || Sbjct: 163 ggtacagctgatataaaagccacatttggaaaaggccagaagcatgaactaaatgtatcc 222 Query: 376 acttaccagatgtgtgtcctgatgct 401 ||||| ||||||||||| || ||||| Sbjct: 223 acttatcagatgtgtgttctcatgct 248
>ref|NM_102447.3| Arabidopsis thaliana ATCUL3/ATCUL3A/CUL3/CUL3A; protein binding / ubiquitin-protein ligase AT1G26830 (ATCUL3/ATCUL3A/CUL3/CUL3A) mRNA, complete cds Length = 2526 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 34 gtgaagctgaagactgaatgtggctaccagtttacctcaaagttggaaagcatgttcact 93 ||||| || ||||| ||||||||||| ||||| || ||||| |||||| ||||||||||| Sbjct: 1502 gtgaaactaaagacagaatgtggctatcagttcacttcaaaattggaaggcatgttcact 1561 Query: 94 gatttgaagac 104 || ||||||| Sbjct: 1562 gacatgaagac 1572
>emb|AJ344252.1|ATH344252 Arabidopsis thaliana mRNA for cullin 3a (cul3a gene) Length = 2544 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 34 gtgaagctgaagactgaatgtggctaccagtttacctcaaagttggaaagcatgttcact 93 ||||| || ||||| ||||||||||| ||||| || ||||| |||||| ||||||||||| Sbjct: 1502 gtgaaactaaagacagaatgtggctatcagttcacttcaaaattggaaggcatgttcact 1561 Query: 94 gatttgaagac 104 || ||||||| Sbjct: 1562 gacatgaagac 1572
>emb|AJ319540.1|ATH319540 Arabidopsis thaliana partial mRNA for cullin 3a (cul3a gene) Length = 1204 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 34 gtgaagctgaagactgaatgtggctaccagtttacctcaaagttggaaagcatgttcact 93 ||||| || ||||| ||||||||||| ||||| || ||||| |||||| ||||||||||| Sbjct: 158 gtgaaactaaagacagaatgtggctatcagttcacttcaaaattggaaggcatgttcact 217 Query: 94 gatttgaagac 104 || ||||||| Sbjct: 218 gacatgaagac 228
>gb|AC006535.7|AC006535 Genomic sequence for Arabidopsis thaliana BAC T24P13 from chromosome I, complete sequence Length = 98630 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 34 gtgaagctgaagactgaatgtggctaccagtttacctcaaagttggaaagcatgttcact 93 ||||| || ||||| ||||||||||| ||||| || ||||| |||||| ||||||||||| Sbjct: 97272 gtgaaactaaagacagaatgtggctatcagttcacttcaaaattggaaggcatgttcact 97331 Query: 94 gatttgaagac 104 || ||||||| Sbjct: 97332 gacatgaagac 97342
>gb|AC005508.1|AC005508 Arabidopsis thaliana chromosome I BAC T2P11 genomic sequence, complete sequence Length = 85372 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 34 gtgaagctgaagactgaatgtggctaccagtttacctcaaagttggaaagcatgttcact 93 ||||| || ||||| ||||||||||| ||||| || ||||| |||||| ||||||||||| Sbjct: 5427 gtgaaactaaagacagaatgtggctatcagttcacttcaaaattggaaggcatgttcact 5486 Query: 94 gatttgaagac 104 || ||||||| Sbjct: 5487 gacatgaagac 5497
>gb|AC146568.11| Medicago truncatula clone mth2-101o18, complete sequence Length = 129921 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 354 gaagcatgagctaaatgtctcaacttaccagatgtgtgtcctgatgct 401 |||||||||| |||||||||| || ||||| ||||||||||| ||||| Sbjct: 71564 gaagcatgagttaaatgtctctacctaccaaatgtgtgtccttatgct 71517 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Minus Query: 32 ttgtgaagctgaagactgaatgtggctaccagtttacctcaaa 74 |||| ||||| ||||||||||||||||| || ||||| ||||| Sbjct: 71889 ttgttaagctcaagactgaatgtggctatcaatttacatcaaa 71847
>gb|AC122544.1| Genomic sequence for Lycopersicon esculentum, clone L136C6, complete sequence Length = 121637 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 292 aggaggttgacatggcagacaaatatgggga 322 ||||||||| ||||||||||||||||||||| Sbjct: 54415 aggaggttgtcatggcagacaaatatgggga 54445 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 487 tctctggcttgtgtgaagggcaagaacgtactgcggaaggagcccatgagcaaggatat 545 ||||| |||||||| ||||| ||||| || || ||||||| || |||||||||||||| Sbjct: 54613 tctctcgcttgtgtcaaggggaagaatgttttgaggaaggaaccaatgagcaaggatat 54671
>gb|AC160992.2| Mus musculus BAC clone RP23-147I23 from chromosome 9, complete sequence Length = 215980 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 320 ggaatgcagacattaaggcaacatttg 346 ||||||||||||||||| ||||||||| Sbjct: 189162 ggaatgcagacattaagccaacatttg 189188
>gb|AC113548.22| Mus musculus chromosome 9, clone RP23-268F15, complete sequence Length = 195273 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 320 ggaatgcagacattaaggcaacatttg 346 ||||||||||||||||| ||||||||| Sbjct: 10115 ggaatgcagacattaagccaacatttg 10141
>emb|AL391601.6| Human DNA sequence from clone RP11-551D9 on chromosome 13, complete sequence Length = 145871 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 355 aagcatgagctaaatgtctca 375 ||||||||||||||||||||| Sbjct: 73993 aagcatgagctaaatgtctca 74013
>emb|AL360294.11| Human DNA sequence from clone RP11-400F1 on chromosome 1, complete sequence Length = 111990 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 561 tttccacttcaacgacaagtt 581 ||||||||||||||||||||| Sbjct: 19535 tttccacttcaacgacaagtt 19555
>emb|BX067147.1|CNS09NZ3 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC50CH01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 972 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 376 acttaccagatgtgtgtcctgatgctatttaac 408 ||||| ||||||||||| |||||||| |||||| Sbjct: 441 acttatcagatgtgtgtactgatgctgtttaac 473
>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 Length = 2356219 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 atggggaatgcagacattaag 336 ||||||||||||||||||||| Sbjct: 69107 atggggaatgcagacattaag 69087
>gb|AC158648.2| Mus musculus 6 BAC RP23-431M16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 205189 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 392 tcctgatgctatttaactcaa 412 ||||||||||||||||||||| Sbjct: 96714 tcctgatgctatttaactcaa 96694
>gb|AC155836.5| Mus musculus 6 BAC RP24-511F13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 147664 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 392 tcctgatgctatttaactcaa 412 ||||||||||||||||||||| Sbjct: 9814 tcctgatgctatttaactcaa 9794
>gb|AC112997.10| Mus musculus chromosome 8, clone RP24-484I6, complete sequence Length = 191413 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 tgtgaagctgaagactgaat 52 |||||||||||||||||||| Sbjct: 6916 tgtgaagctgaagactgaat 6897
>gb|AC119190.7| Mus musculus chromosome 8, clone RP24-178B9, complete sequence Length = 139843 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 tgtgaagctgaagactgaat 52 |||||||||||||||||||| Sbjct: 107094 tgtgaagctgaagactgaat 107075
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 ttgctggtgacgttgatggc 159 |||||||||||||||||||| Sbjct: 1002419 ttgctggtgacgttgatggc 1002438
>ref|XM_855092.1| PREDICTED: Canis familiaris similar to Cullin-3 (CUL-3), transcript variant 6 (LOC477392), mRNA Length = 3888 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 43 aagactgaatgtggctaccagtttacctcaaa 74 |||||||||||||||| |||||||| ||||| Sbjct: 1394 aagactgaatgtggctgtcagtttacatcaaa 1425
>ref|XM_855050.1| PREDICTED: Canis familiaris similar to Cullin-3 (CUL-3), transcript variant 5 (LOC477392), mRNA Length = 3817 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 43 aagactgaatgtggctaccagtttacctcaaa 74 |||||||||||||||| |||||||| ||||| Sbjct: 1311 aagactgaatgtggctgtcagtttacatcaaa 1342
>ref|XM_855012.1| PREDICTED: Canis familiaris similar to Cullin-3 (CUL-3), transcript variant 4 (LOC477392), mRNA Length = 3745 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 43 aagactgaatgtggctaccagtttacctcaaa 74 |||||||||||||||| |||||||| ||||| Sbjct: 1311 aagactgaatgtggctgtcagtttacatcaaa 1342
>ref|XM_854981.1| PREDICTED: Canis familiaris similar to Cullin-3 (CUL-3), transcript variant 3 (LOC477392), mRNA Length = 3736 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 43 aagactgaatgtggctaccagtttacctcaaa 74 |||||||||||||||| |||||||| ||||| Sbjct: 1311 aagactgaatgtggctgtcagtttacatcaaa 1342
>ref|XM_854942.1| PREDICTED: Canis familiaris similar to Cullin-3 (CUL-3), transcript variant 2 (LOC477392), mRNA Length = 3618 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 43 aagactgaatgtggctaccagtttacctcaaa 74 |||||||||||||||| |||||||| ||||| Sbjct: 1311 aagactgaatgtggctgtcagtttacatcaaa 1342
>ref|XM_534586.2| PREDICTED: Canis familiaris similar to Cullin-3 (CUL-3), transcript variant 1 (LOC477392), mRNA Length = 3805 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 43 aagactgaatgtggctaccagtttacctcaaa 74 |||||||||||||||| |||||||| ||||| Sbjct: 1311 aagactgaatgtggctgtcagtttacatcaaa 1342
>emb|AL356103.8| Human DNA sequence from clone RP4-713A24 on chromosome 1p22.2-31.1 Contains STSs and GSSs, complete sequence Length = 112069 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 acttaccagatgtgtgtcct 395 |||||||||||||||||||| Sbjct: 94666 acttaccagatgtgtgtcct 94647
>emb|X95609.1|CEDNAMEC8 C.elegans mec-8 gene Length = 5103 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 tggctaccagtttacctcaaagtt 77 ||||| |||||||||||||||||| Sbjct: 2189 tggctgccagtttacctcaaagtt 2212
>gb|AC106732.2| Homo sapiens chromosome 5 clone CTD-2275D24, complete sequence Length = 119012 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 cagtctctggcttgtgtgaa 503 |||||||||||||||||||| Sbjct: 15100 cagtctctggcttgtgtgaa 15081
>dbj|BS000102.1| Pan troglodytes chromosome 22 clone:RP43-107D21, map 22, complete sequences Length = 65478 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 tgacatggcagacaaatatg 318 |||||||||||||||||||| Sbjct: 34356 tgacatggcagacaaatatg 34337
>emb|BX255920.4| Zebrafish DNA sequence from clone CH211-155K23 in linkage group 20, complete sequence Length = 92280 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 cttgttgtttctgagcagtt 260 |||||||||||||||||||| Sbjct: 43512 cttgttgtttctgagcagtt 43493
>dbj|AP001693.1| Homo sapiens genomic DNA, chromosome 21q, section 37/105 Length = 340000 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 tgacatggcagacaaatatg 318 |||||||||||||||||||| Sbjct: 69762 tgacatggcagacaaatatg 69743
>emb|BX005250.7| Zebrafish DNA sequence from clone DKEY-35H6 in linkage group 14, complete sequence Length = 281427 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 aaagttggaaagcatgttca 91 |||||||||||||||||||| Sbjct: 76222 aaagttggaaagcatgttca 76241
>dbj|AP001340.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B2289H10, LL56-APP region, complete sequence Length = 58771 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 tgacatggcagacaaatatg 318 |||||||||||||||||||| Sbjct: 6571 tgacatggcagacaaatatg 6552 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,168,030 Number of Sequences: 3902068 Number of extensions: 5168030 Number of successful extensions: 84542 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 55 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 84287 Number of HSP's gapped (non-prelim): 249 length of query: 593 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 570 effective length of database: 17,143,297,704 effective search space: 9771679691280 effective search space used: 9771679691280 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)