>TRI37_HUMAN (O94972) Tripartite motif protein 37 (Mulibrey nanism protein)|
          Length = 964

 Score = 34.3 bits (77), Expect = 0.35
 Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
 Frame = +3

Query: 384 SESSAAQPVEEENRIAGCDFEYTIDDFGESDTDEFFAPMERNEVCGSRISESSLA----- 548
           S   A +  E+E +I   D+ + + D G+ D D  +   E N++ GS  S SS A     
Sbjct: 490 SVREAKEDEEDEEKIQNEDYHHELSD-GDLDLDLVYED-EVNQLDGSSSSASSTATSNTE 547

Query: 549 -QPVEEETRIADSDVEY 596
              ++EET   ++DVEY
Sbjct: 548 ENDIDEETMSGENDVEY 564

>MID2_YEAST (P36027) Mating process protein MID2 (Serine-rich protein SMS1)|
           (Protein kinase A interference protein)
          Length = 376

 Score = 33.9 bits (76), Expect = 0.45
 Identities = 30/119 (25%), Positives = 45/119 (37%)
 Frame = -2

Query: 610 KSSMGYSTSESAILVSSSTGWAREDSEILDPQTSFRSIGAKNXXXXXXXXXXXXXXXSQP 431
           +SS+   +S S+IL SS    +  DS  L   TS RS+ +                    
Sbjct: 43  RSSVSRVSSSSSILSSSMVSSSSADSSSLTSSTSSRSLVSHTSSSTSIASISFTSFSFSS 102

Query: 430 AILFSSSTGWAAEDSEILDAKTSLRSIGTKESSVSDSPPTIXXXXXXXXXXXSEASPPT 254
               SSS+  A+ DS    + +   +  T ESS S +  +            S +SP T
Sbjct: 103 DSSTSSSSS-ASSDSSSSSSFSISSTSATSESSTSSTQTSTSSSSSLSSTPSSSSSPST 160

>TRI37_MOUSE (Q6PCX9) Tripartite motif protein 37|
          Length = 961

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
 Frame = +3

Query: 411 EEENRIAGCDFEYTIDDFGESDTDEFFAPMERNEVCGSRISESSLA------QPVEEETR 572
           +EE +I   D+ + + D G+ D D      E N + GS  S SS A        ++EET 
Sbjct: 500 DEEEKIQNEDYHHELSD-GDLDLD-LVGEDEVNHLDGSSSSASSTATSNTEENDIDEETM 557

Query: 573 IADSDVEY 596
             ++DVEY
Sbjct: 558 SGENDVEY 565

>Y5843_ARATH (Q9FT92) Protein At5g08430|
          Length = 553

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 19/58 (32%), Positives = 29/58 (50%)
 Frame = +3

Query: 306 GIVGGESDTDDSFVPMERSEVFASRISESSAAQPVEEENRIAGCDFEYTIDDFGESDT 479
           GI+GGE+ T++S V   +S +  + +   S  QP   E      D E   DD G+ +T
Sbjct: 426 GIIGGETPTEESKVSQLQSSIPVNNVDNGSQVQPNPSEVIELSDDDE---DDNGDGET 480

>TPIS_TREPA (O83548) Triosephosphate isomerase (EC 5.3.1.1) (TIM)|
           (Triose-phosphate isomerase)
          Length = 249

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
 Frame = -1

Query: 194 ALDVAREILHRANDSL---HVAGEGWAAR-GELGILGGEEVHREIQVLPRREVEHGVGEL 27
           ALD   ++L  +N  L    V+ E W A  GE+ +L  E++  ++ ++   E  HG GE 
Sbjct: 45  ALDAVGKVLRGSNVLLGAQDVSSEEWGAHTGEVSVLQLEDLGVQVVIVGHSERRHGRGEN 104

Query: 26  D 24
           D
Sbjct: 105 D 105

>RYR3_HUMAN (Q15413) Ryanodine receptor 3 (Brain-type ryanodine receptor) (RyR3)|
            (RYR-3) (Brain ryanodine receptor-calcium release
            channel)
          Length = 4870

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
 Frame = +3

Query: 315  GGESDTDDSFVPMERSEVF----ASRISESSAAQPVEEENRIAGCDFEYTIDDFGESDTD 482
            GGE +  + FV      +F    AS+ISES +A   EEE      D  Y ++  GE + D
Sbjct: 4076 GGEQEKMELFVNFCEDTIFEMQLASQISESDSADRPEEEEEDE--DSSYVLEIAGEEEED 4133

Query: 483  EFFAP 497
                P
Sbjct: 4134 GSLEP 4138

>ZN638_MOUSE (Q61464) Zinc finger protein 638 (Nuclear protein 220) (Zinc-finger|
           matrin-like protein)
          Length = 1960

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 3/103 (2%)
 Frame = +3

Query: 261 GDASDHGLRTLDLETGIVGGESDTDD---SFVPMERSEVFASRISESSAAQPVEEENRIA 431
           G AS +G     LE  I   E  TD+    F P +        IS + +   V   +   
Sbjct: 212 GHASKYGYTEDPLEVRIYDPEIPTDEVKNEFQPQQS-------ISATVSTPNVICNSVFP 264

Query: 432 GCDFEYTIDDFGESDTDEFFAPMERNEVCGSRISESSLAQPVE 560
           G D    +D  GES +  FF      ++ G  IS  S+ +PV+
Sbjct: 265 GGDMFRQMDFPGESSSQSFFPVESGTKMSGLHISGQSVLEPVK 307

>WSC2_YEAST (P53832) Cell wall integrity and stress response component 2|
           precursor
          Length = 503

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 21/78 (26%), Positives = 29/78 (37%)
 Frame = -2

Query: 418 SSSTGWAAEDSEILDAKTSLRSIGTKESSVSDSPPTIXXXXXXXXXXXSEASPPTAAXXX 239
           SSST  +++ S  LD KTS  S  T  SS S S  +            S +S  ++    
Sbjct: 138 SSSTSVSSKTSTKLDTKTSTSSSATHSSS-SSSTTSTTTSSSETTTSSSSSSSSSSTSTT 196

Query: 238 XXXXXXXXXXXSDERPST 185
                      +   PST
Sbjct: 197 STTSTTSSTTSTSSSPST 214

>DMXL2_HUMAN (Q8TDJ6) Protein DmX-like 2 (Rabconnectin-3)|
          Length = 3036

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = -1

Query: 659 HVQVRCFVNSAPFHVTEVINGIFNIRVSDSGFFFHWLGQRGF*NS*STNLIPFHRSKKL 483
           H  +   +N A      ++   FN+   + GF  HWL  + F  + ST +   H+ +KL
Sbjct: 357 HFHIAASINPATDIPNVLVGTAFNVDDGNGGFVVHWLNNKEFHFTSSTEVF-MHQLRKL 414


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,027,240
Number of Sequences: 219361
Number of extensions: 1918085
Number of successful extensions: 6006
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6003
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6484657212
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)