ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags9l20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF446052.1|AF446051S2 Hordeum vulgare Rpl16 (rpl16) gene, exon 2 and partial cds; chloroplast genes for chloroplast products Length = 406 Score = 583 bits (294), Expect = e-163 Identities = 299/301 (99%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 8 cctaactttttctattatctattaatgtgtatctatccgtaccgtaatatttttaaatat 67 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 68 tatggaattagagaaatttatttacacgctttctcattccattcgcgaggagctggatga 127 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 187 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 247 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 248 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 307 Query: 580 a 580 | Sbjct: 308 a 308
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 496 bits (250), Expect = e-137 Identities = 287/298 (96%), Gaps = 5/298 (1%) Strand = Plus / Minus Query: 283 aactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatattat 342 |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 78097 aactttttctattatctattaatgtgtatctatccgtaccgtaatattttggaatattat 78038 Query: 343 ggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatgagaa 402 | ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 78037 g-aattagataaattta----catgctttctcattccattcgcgaggagctggatgagaa 77983 Query: 403 gaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgactat 462 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 77982 gaaactctcatgtccagttttgcagtagagatggaactaagaaagagaaccatcgactat 77923 Query: 463 aaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttc 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 77922 aaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcctgc 77863 Query: 523 cgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77862 cgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgga 77805 Score = 400 bits (202), Expect = e-108 Identities = 249/260 (95%), Gaps = 6/260 (2%) Strand = Plus / Minus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||| Sbjct: 78362 aaaaaattgtcttatttggtaagtttataaattaacaaataag-acagg-aaag-agtaa 78306 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 78305 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtca 78246 Query: 124 aaataaggatattttttagaaggactacattattatctataaatatagaatttagataaa 183 |||||||||| ||||| ||||||| |||||||| |||||||||||||||||||||||| Sbjct: 78245 aaataaggatttttttaagaaggattacattat---ctataaatatagaatttagataaa 78189 Query: 184 tatccacacacatctggatatattctagatcttcttttttgactatatattatatttttc 243 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78188 tatacacacacatctggatatattctagatcttcttttttgactatatattatatttttc 78129 Query: 244 tgttttaacaaattcaatat 263 |||||||||||||||||||| Sbjct: 78128 tgttttaacaaattcaatat 78109
>gb|AY847073.1| Danthonia spicata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1114 Score = 432 bits (218), Expect = e-118 Identities = 281/301 (93%), Gaps = 11/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||| Sbjct: 804 cctaactttttctattatctattaatgtgtatctatccgta-----atattttttaatat 858 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 859 tatggaattagagaaatttg----cacgctttctcatttcattcgcgaggagctggatga 914 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 915 gaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgac 972 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 973 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaagggaaaatct 1032 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1033 tgccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 1092 Query: 580 a 580 | Sbjct: 1093 a 1093 Score = 91.7 bits (46), Expect = 2e-15 Identities = 142/173 (82%), Gaps = 22/173 (12%) Strand = Plus / Plus Query: 93 agaatactttaccgcgattcaataagagtaaaaataaggatatttttt-----agaagga 147 |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 635 agaatactttaccgcgattcaataagagtaaaaataaggagattttttttttaagaagga 694 Query: 148 ctacattattatctataaatatagaatttagataaatatccacacacatctggatatatt 207 ||| |||||||||||| ||||||| ||||||||| ||||||||||| || Sbjct: 695 ttac---attatctataaa-atagaatatagataaatggacacacacatctaga------ 744 Query: 208 ctagatcttcttttttgactatatattatatttttctgttttaacaaattcaa 260 ||||||||||| ||||||| ||||||||||| ||||||||||||||| Sbjct: 745 --agatcttctttcttgacta-----tatatttttctattttaacaaattcaa 790 Score = 81.8 bits (41), Expect = 2e-12 Identities = 70/76 (92%), Gaps = 3/76 (3%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||||||||||||||||| ||||||||||||||| ||| ||||| |||| ||| | Sbjct: 563 aaaaaattgtcttatttggtaaggttataaattaacaaaaaag-acaggaaaag-agt-a 619 Query: 64 atattcgcccgcgaaa 79 |||||||||||||||| Sbjct: 620 atattcgcccgcgaaa 635
>gb|AF133473.1|AF133473 Otatea acuminata ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1185 Score = 432 bits (218), Expect = e-118 Identities = 281/301 (93%), Gaps = 11/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||||||||||||||| | ||||||||||| |||||||| ||||| Sbjct: 875 cctaactttttctattatctattaatgtgcatctatccgta-----atatttttgaatat 929 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 930 tatggaattagagaaatttg----catgctttctcatttcattcgcgaggagctggatga 985 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 986 gaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgac 1043 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1044 tataaccccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcc 1103 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1104 tgccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 1163 Query: 580 a 580 | Sbjct: 1164 a 1164 Score = 125 bits (63), Expect = 2e-25 Identities = 96/107 (89%), Gaps = 5/107 (4%) Strand = Plus / Plus Query: 157 tatctataaatatagaatttagataaatatccacacacatctggatatattctagatctt 216 |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||| Sbjct: 757 tatctataaatatagaatatagataaatagacacacacatctagatatattctagatctt 816 Query: 217 cttttttgactatatattatatttttctgttttaacaaattcaatat 263 |||| ||||||| ||||||||||| |||||||||||||||||| Sbjct: 817 ctttcttgacta-----tatatttttctattttaacaaattcaatat 858 Score = 115 bits (58), Expect = 2e-22 Identities = 106/118 (89%), Gaps = 8/118 (6%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtt-----tataaattaacaaataagnacaggnaaagn 58 ||||||||| ||||||||||||| | |||||||||||||||||| ||||| |||| Sbjct: 644 aaaaaattgccttatttggtaaggttataatataaattaacaaataag-acagg-aaag- 700 Query: 59 agtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaata 116 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 701 agtaaatattcgcccgcgaaatctttattgaattagaatactttaccgcgattcaata 758
>gb|AY912208.1| Nastus elegantissimus ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1224 Score = 424 bits (214), Expect = e-115 Identities = 280/301 (93%), Gaps = 11/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||||||||||||||| | ||||||||||| |||||||| ||||| Sbjct: 901 cctaactttttctattatctattaatgtgcatctatccgta-----atattttttaatat 955 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 956 tatggaattagagaaatttg----cacgctttctcatttcattcgcgaggagctggatga 1011 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1012 gaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgac 1069 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1070 tataaccccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcc 1129 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1130 tgccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 1189 Query: 580 a 580 | Sbjct: 1190 a 1190 Score = 234 bits (118), Expect = 3e-58 Identities = 235/269 (87%), Gaps = 20/269 (7%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagttt-----ataaattaacaaataagnacaggnaaagn 58 ||||||||| ||||||||||||| || ||||||||||||||||| ||||| |||| Sbjct: 627 aaaaaattgccttatttggtaaggttttaatataaattaacaaataag-acagg-aaag- 683 Query: 59 agtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataag 118 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 684 agtaaatattcgcccgcgaaatctttattgaattagaatactttaccgcgattcaataag 743 Query: 119 agtaaaaataaggatatttttt----agaaggactacattattatctataaatatagaat 174 |||||||||||||| ||||||| |||| || ||| |||||||||||||||||||| Sbjct: 744 agtaaaaataaggagattttttgttaagaaagattac---attatctataaatatagaat 800 Query: 175 ttagataaatatccacacacatctggatatattctagatcttcttttttgactatatatt 234 |||||||||| ||||||||||| ||||||||||||||||||||| ||||||| | Sbjct: 801 atagataaatagacacacacatctagatatattctagatcttctttcttgacta-----t 855 Query: 235 atatttttctgttttaacaaattcaatat 263 |||||| ||| |||||||||||||||||| Sbjct: 856 atatttatctattttaacaaattcaatat 884
>gb|AY847071.1| Glyceria striata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1142 Score = 416 bits (210), Expect = e-113 Identities = 279/301 (92%), Gaps = 11/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 |||||||||||||||||||||||||| ||||||||||||| |||||||| ||||| Sbjct: 832 cctaactttttctattatctattaatccgtatctatccgta-----atattttttaatat 886 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 |||| |||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 887 tatgaaattagagaaatttg----cacgctttctcatttcattcgcgaggagctggatga 942 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||| Sbjct: 943 gaagaaactctcatgtccagttttgcagtagagatggaactaagaaata--accatcgac 1000 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1001 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaagggaaaatcc 1060 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1061 tgccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 1120 Query: 580 a 580 | Sbjct: 1121 a 1121 Score = 256 bits (129), Expect = 7e-65 Identities = 234/262 (89%), Gaps = 14/262 (5%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||| |||||||||||||| ||||||||||||||||||| ||||| |||| ||||| Sbjct: 574 aaaaaattctcttatttggtaagcttataaattaacaaataag-acagg-aaag-agtaa 630 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 631 atattcgcccgcgaaatacttattgaattagaatactttaccgcgattcaataagagtaa 690 Query: 124 aaataaggatatttttt--agaaggactacattattatctataaatatagaatttagata 181 |||||| |||||||||| ||||||| ||| |||||||| ||| ||||||| |||||| Sbjct: 691 aaataaagatatttttttaagaaggattac---attatctagaaa-atagaatatagata 746 Query: 182 aatatccacacacatctggatatattctagatcttcttttttgactatatattatatttt 241 |||| || |||||||| |||||||||| |||||||||| ||||||| |||||||| Sbjct: 747 aatagacatacacatctagatatattctggatcttctttcttgacta-----tatatttt 801 Query: 242 tctgttttaacaaattcaatat 263 ||| |||||||||||||||||| Sbjct: 802 tctattttaacaaattcaatat 823
>gb|AY912212.1| Sirochloa parvifolia ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1217 Score = 416 bits (210), Expect = e-113 Identities = 279/301 (92%), Gaps = 11/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||||||||||||||| | ||||||||||| ||||||| ||||| Sbjct: 893 cctaactttttctattatctattaatgtgcatctatccgta-----atattttggaatat 947 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 948 tatggaattagagaaatttg----cacgctttctcatttcattcgcgaggagctggatga 1003 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1004 gaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgac 1061 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1062 tataaccccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcc 1121 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1122 tgccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 1181 Query: 580 a 580 | Sbjct: 1182 a 1182 Score = 230 bits (116), Expect = 4e-57 Identities = 212/239 (88%), Gaps = 15/239 (6%) Strand = Plus / Plus Query: 29 tataaattaacaaataagnacaggnaaagnagtaaatattcgcccgcgaaattcttattg 88 |||||||||||||||||| ||||| |||| |||||||||||||||||||||| |||||| Sbjct: 649 tataaattaacaaataag-acagg-aaag-agtaaatattcgcccgcgaaatctttattg 705 Query: 89 aattagaatactttaccgcgattcaataagagtaaaaataaggatatttttt----agaa 144 |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 706 aattagaatactttaccgcgattcaataagagtaaaaataaggagattttttgttaagaa 765 Query: 145 ggactacattattatctataaatatagaatttagataaatatccacacacatctggatat 204 || ||| |||||||||||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 766 agattac---attatctataaatatagaatatagataaatagacacacacatctagatat 822 Query: 205 attctagatcttcttttttgactatatattatatttttctgttttaacaaattcaatat 263 |||||||||||||||| ||||||| ||||||| ||| |||||||||||||||||| Sbjct: 823 attctagatcttctttcttgacta-----tatatttatctattttaacaaattcaatat 876
>gb|AY912209.1| Nastus elongatus ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1098 Score = 416 bits (210), Expect = e-113 Identities = 276/297 (92%), Gaps = 11/297 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||||||||||||||| | ||||||||||| |||||||| ||||| Sbjct: 776 cctaactttttctattatctattaatgtgcatctatccgta-----atatttttgaatat 830 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 831 tatggaattagagaaatttg----cacgctttctcatttcattcgcgaggagctggatga 886 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 887 gaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgac 944 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 945 tataaccccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcc 1004 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgct 576 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1005 tgccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgct 1061 Score = 176 bits (89), Expect = 5e-41 Identities = 205/239 (85%), Gaps = 21/239 (8%) Strand = Plus / Plus Query: 29 tataaattaacaaataagnacaggnaaagnagtaaatattcgcccgcgaaattcttattg 88 |||||||||||||||||| ||||| |||| |||||||||||||||||||||| || Sbjct: 538 tataaattaacaaataag-acagg-aaag-agtaaatattcgcccgcgaaatcttt---- 590 Query: 89 aattagaatactttaccgcgattcaataagagtaaaaataaggatatttttt----agaa 144 |||||||||||||||||||||||||||||||||||||||| | ||||||| |||| Sbjct: 591 --ttagaatactttaccgcgattcaataagagtaaaaataagaagattttttgttaagaa 648 Query: 145 ggactacattattatctataaatatagaatttagataaatatccacacacatctggatat 204 || |||||||| ||||||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 649 agattacattat---ctataaatatagaatatagataaatagacacacacatctagatat 705 Query: 205 attctagatcttcttttttgactatatattatatttttctgttttaacaaattcaatat 263 |||||||||||||||| ||||||||||||| | ||| |||||||||||||||||| Sbjct: 706 attctagatcttctttcttgactatatatt-----tatctattttaacaaattcaatat 759
>gb|AY912207.1| Nastus borbonicus ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1219 Score = 416 bits (210), Expect = e-113 Identities = 279/301 (92%), Gaps = 11/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||||||||||||||| | ||||||||||| ||||||| ||||| Sbjct: 895 cctaactttttctattatctattaatgtgcatctatccgta-----atattttggaatat 949 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 950 tatggaattagagaaatttg----cacgctttctcatttcattcgcgaggagctggatga 1005 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1006 gaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgac 1063 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1064 tataaccccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcc 1123 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1124 tgccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 1183 Query: 580 a 580 | Sbjct: 1184 a 1184 Score = 226 bits (114), Expect = 6e-56 Identities = 234/269 (86%), Gaps = 20/269 (7%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtt-----tataaattaacaaataagnacaggnaaagn 58 ||||||||| ||||||||||||| | |||||||||||||||||| ||||| |||| Sbjct: 628 aaaaaattgccttatttggtaaggttataatataaattaacaaataag-acagg-aaag- 684 Query: 59 agtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataag 118 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 685 agtaaatattcgcccgcgaaatctttattgaattagaatactttaccgcgattcaataag 744 Query: 119 agtaaaaataaggatatttttt----agaaggactacattattatctataaatatagaat 174 |||||||||||||| ||||||| |||| || ||| ||||||||||||||| |||| Sbjct: 745 agtaaaaataaggagattttttgttaagaaagattac---attatctataaatatggaat 801 Query: 175 ttagataaatatccacacacatctggatatattctagatcttcttttttgactatatatt 234 |||||||||| ||||||||||| ||||||||||||||||||||| ||||||| | Sbjct: 802 atagataaatagacacacacatctagatatattctagatcttctttcttgacta-----t 856 Query: 235 atatttttctgttttaacaaattcaatat 263 |||||| ||| |||||||||||||||||| Sbjct: 857 atatttatctattttaacaaattcaatat 885
>gb|AY912204.1| Greslania circinata ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1170 Score = 416 bits (210), Expect = e-113 Identities = 279/301 (92%), Gaps = 11/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||||||||||||||| | ||||||||||| ||||||| ||||| Sbjct: 847 cctaactttttctattatctattaatgtgcatctatccgta-----atattttggaatat 901 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 902 tatggaattagagaaatttg----cacgctttctcatttcattcgcgaggagctggatga 957 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 958 gaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgac 1015 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1016 tataaccccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcc 1075 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1076 tgccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 1135 Query: 580 a 580 | Sbjct: 1136 a 1136 Score = 151 bits (76), Expect = 3e-33 Identities = 106/112 (94%), Gaps = 3/112 (2%) Strand = Plus / Plus Query: 29 tataaattaacaaataagnacaggnaaagnagtaaatattcgcccgcgaaattcttattg 88 |||||||||||||||||| ||||| |||| |||||||||||||||||||||| |||||| Sbjct: 681 tataaattaacaaataag-acagg-aaag-agtaaatattcgcccgcgaaatctttattg 737 Query: 89 aattagaatactttaccgcgattcaataagagtaaaaataaggatatttttt 140 |||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 738 aattagaatactttaccgcgattcaataagagtaaaaataaggagatttttt 789
>gb|AY912199.1| Cephalostachyum pergracile ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1226 Score = 416 bits (210), Expect = e-113 Identities = 279/301 (92%), Gaps = 11/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||||||||||||||| | ||||||||||| |||||||| ||||| Sbjct: 902 cctaactttttctattatctattaatgtgcatctatccgta-----atatttttgaatat 956 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 957 tatggaattagagaaatttg----cacgctttctcatttcattcgcgaggagctggatga 1012 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1013 gaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgac 1070 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 |||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||| Sbjct: 1071 tataaccccaaaagaaccagatttcgtaaacaacatagaagaagaatgaagggaaaatcc 1130 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1131 tgccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 1190 Query: 580 a 580 | Sbjct: 1191 a 1191 Score = 226 bits (114), Expect = 6e-56 Identities = 234/269 (86%), Gaps = 20/269 (7%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtt-----tataaattaacaaataagnacaggnaaagn 58 ||||||||| ||||||||||||| | |||||||||||||||||| ||||| |||| Sbjct: 628 aaaaaattgccttatttggtaaggttataatataaattaacaaataag-acagg-aaag- 684 Query: 59 agtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataag 118 |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 685 agtaaatattcgcccgcgaaatctttattgaattaaaatactttaccgcgattcaataag 744 Query: 119 agtaaaaataaggatatttttt----agaaggactacattattatctataaatatagaat 174 |||||||||||||| ||||||| |||| || ||| |||||||||||||||||||| Sbjct: 745 agtaaaaataaggagattttttgttaagaaagattac---attatctataaatatagaat 801 Query: 175 ttagataaatatccacacacatctggatatattctagatcttcttttttgactatatatt 234 |||||||||| ||||||||||| ||||||||||||||||||||| || |||| | Sbjct: 802 atagataaatagacacacacatctagatatattctagatcttctttctttacta-----t 856 Query: 235 atatttttctgttttaacaaattcaatat 263 |||||||||| |||||||||||||||||| Sbjct: 857 atatttttctattttaacaaattcaatat 885
>gb|AY912191.1| Aulonemia patula ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1186 Score = 416 bits (210), Expect = e-113 Identities = 279/301 (92%), Gaps = 11/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||||||||||||||| | ||||||||||| |||||||| ||||| Sbjct: 863 cctaactttttctattatctattaatgtgcatctatccgta-----atatttttgaatat 917 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 ||||||||||||||||||| |||||||||||||| |||||| |||||||||||||| Sbjct: 918 tatggaattagagaaatttg----catgctttctcatttcattcgtgaggagctggatga 973 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 974 gaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgac 1031 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 |||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||| Sbjct: 1032 tataaccccaaaagaaccagatttcgtaaccaacatagaggaagaatgaagggaaaatcc 1091 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1092 tgccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 1151 Query: 580 a 580 | Sbjct: 1152 a 1152 Score = 220 bits (111), Expect = 4e-54 Identities = 233/269 (86%), Gaps = 20/269 (7%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataa-----attaacaaataagnacaggnaaagn 58 ||||||||| ||||||||||||| |||||| |||| |||||||| |||| |||| Sbjct: 596 aaaaaattgccttatttggtaaggttataatataaattagcaaataagg-cagg-aaag- 652 Query: 59 agtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataag 118 |||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||| Sbjct: 653 agtaaatattcgcccgcgaaatctttattgaattagaattctttcccgcgattcaataag 712 Query: 119 agtaaaaataaggatatttttt----agaaggactacattattatctataaatatagaat 174 |||||||||||||| ||||||| |||| || |||||||| ||||||||||||||| Sbjct: 713 agtaaaaataaggagatttttttttaagaaagattacattat---ctataaatatagaat 769 Query: 175 ttagataaatatccacacacatctggatatattctagatcttcttttttgactatatatt 234 |||||||||| |||||||||||| ||||||||||||||||||||| ||||||| | Sbjct: 770 atagataaatagccacacacatctagatatattctagatcttctttcttgacta-----t 824 Query: 235 atatttttctgttttaacaaattcaatat 263 |||||||||| |||||||||||||||||| Sbjct: 825 atatttttctattttaacaaattcaatat 853
>gb|AY912189.1| Arthrostylidium ecuadorense ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1224 Score = 416 bits (210), Expect = e-113 Identities = 279/301 (92%), Gaps = 11/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||||||||||||||| | ||||||||||| ||||||| ||||| Sbjct: 900 cctaactttttctattatctattaatgtgcatctatccgta-----atattttggaatat 954 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 |||||||||||| |||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 955 tatggaattagataaatttg----catgctttctcatttcattcgcgaggagctggatga 1010 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1011 gaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgac 1068 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1069 tataaccccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcc 1128 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1129 tgccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 1188 Query: 580 a 580 | Sbjct: 1189 a 1189 Score = 250 bits (126), Expect = 4e-63 Identities = 237/269 (88%), Gaps = 20/269 (7%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtt-----tataaattaacaaataagnacaggnaaagn 58 ||||||||| ||||||||||||| | |||||||||||||||||| ||||| |||| Sbjct: 626 aaaaaattgccttatttggtaaggttataatataaattaacaaataag-acagg-aaag- 682 Query: 59 agtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataag 118 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 683 agtaaatattcgcccgcgaaatctttattgaattagaatactttaccgcgattcaataag 742 Query: 119 agtaaaaataaggatatttttt----agaaggactacattattatctataaatatagaat 174 |||||||||||||| ||||||| ||||||| ||||||||| |||||||||||||| Sbjct: 743 agtaaaaataaggagatttttttaaaagaaggattacattatt---tataaatatagaat 799 Query: 175 ttagataaatatccacacacatctggatatattctagatcttcttttttgactatatatt 234 |||||||||| ||||||||||| ||||||||||||||||||||| ||||||| | Sbjct: 800 atagataaatagacacacacatctagatatattctagatcttctttcttgacta-----t 854 Query: 235 atatttttctgttttaacaaattcaatat 263 |||||||||| |||||||||||||||||| Sbjct: 855 atatttttctattttaacaaattcaatat 883
>gb|AF133460.1|AF133460 Streptogyna americana ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1228 Score = 416 bits (210), Expect = e-113 Identities = 279/301 (92%), Gaps = 11/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||| Sbjct: 918 cctaactttttctattatctattaatgtgtatctatccgta-----atattttggaatat 972 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 973 tatggaattagagaaatttg----cacgctttctcatttcattcgcgaggagctggatga 1028 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1029 gaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgac 1086 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1087 tataaccccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcc 1146 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1147 tgccgaggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 1206 Query: 580 a 580 | Sbjct: 1207 a 1207 Score = 135 bits (68), Expect = 2e-28 Identities = 104/112 (92%), Gaps = 3/112 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| ||||||||||||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 649 aaaaaattggcttatttggtaaggttatgaattaacaaataag-acagg-aaag-agtaa 705 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaat 115 ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 706 atattcgcccgcgaaatctttattgaattagaatactttaccgcgattcaat 757 Score = 97.6 bits (49), Expect = 4e-17 Identities = 88/101 (87%), Gaps = 5/101 (4%) Strand = Plus / Plus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| ||||||||||| || |||||||||||||||||| | Sbjct: 813 taaatatagaatatagataaataaacacacacatctagacatattctagatcttctttct 872 Query: 223 tgactatatattatatttttctgttttaacaaattcaatat 263 |||||| ||||||||||| ||||||||||||| |||| Sbjct: 873 tgacta-----tatatttttctattttaacaaattccatat 908
>gb|AY847092.1| Arundoclaytonia dissimilis ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1053 Score = 408 bits (206), Expect = e-111 Identities = 275/297 (92%), Gaps = 11/297 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||||||||||||||| | ||||||||||| ||||||| ||||| Sbjct: 768 cctaactttttctattatctattaatgtgcatctatccgta-----atattttggaatat 822 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 |||||||||||| |||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 823 tatggaattagataaatttg----catgctttctcatttcattcgcgaggagctggatga 878 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 879 gaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgac 936 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 937 tataaccccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcc 996 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgct 576 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 997 tgccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgct 1053 Score = 250 bits (126), Expect = 4e-63 Identities = 232/261 (88%), Gaps = 16/261 (6%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| ||||||||||||| ||| ||||||||||||||| ||||| |||| ||||| Sbjct: 505 aaaaaattgccttatttggtaaggttacaaattaacaaataag-acagg-aaag-agtaa 561 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 562 atattcgcccgcgaaatctttattgaattagaatactttaccgcgattcaataagagtaa 621 Query: 124 aaataaggatatttttt----agaaggactacattattatctataaatatagaatttaga 179 ||||||||| ||||||| ||||||| ||||||||| |||||| ||||||| |||| Sbjct: 622 aaataaggagatttttttaaaagaaggattacattatt---tataaa-atagaatataga 677 Query: 180 taaatatccacacacatctggatatattctagatcttcttttttgactatatattatatt 239 |||||| ||||||||||| ||||||||||||||||||||| ||||||| |||||| Sbjct: 678 taaatagacacacacatctagatatattctagatcttctttcttgacta-----tatatt 732 Query: 240 tttctgttttaacaaattcaa 260 ||||| ||||||||||||||| Sbjct: 733 tttctattttaacaaattcaa 753
>gb|AY912211.1| Perrierbambus madagascariensis ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1214 Score = 408 bits (206), Expect = e-111 Identities = 278/301 (92%), Gaps = 11/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||||||||||||||| | ||||||||||| ||||||| ||||| Sbjct: 891 cctaactttttctattatctattaatgtgcatctatccgta-----atattttggaatat 945 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 946 tatggaattagagaaatttg----cacgctttctcatttcattcgcgaggagctggatga 1001 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1002 gaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgac 1059 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1060 tataaccccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcc 1119 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1120 tgccgaggcaatcgtatttgttttggtagatatgctcttcaagcccttgaacccgcttgg 1179 Query: 580 a 580 | Sbjct: 1180 a 1180 Score = 216 bits (109), Expect = 6e-53 Identities = 213/243 (87%), Gaps = 16/243 (6%) Strand = Plus / Plus Query: 29 tataaattaacaaataagnacaggnaaagnagtaaatattcgcccgcgaaattcttattg 88 |||||||||||||||||| ||||| |||| |||||||||||||||| ||||| |||||| Sbjct: 640 tataaattaacaaataag-acagg-aaag-agtaaatattcgcccgggaaatctttattg 696 Query: 89 aattagaatactttaccgcgattcaataagagtaaaaataaggatatttttt----agaa 144 |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 697 aattagaatactttaccgcgattcaataagagtaaaaataaggagattttttgttaagaa 756 Query: 145 ggactacat----tattatctataaatatagaatttagataaatatccacacacatctgg 200 || ||||| ||| ||||||||||||||||| |||||||||| ||||||||||| | Sbjct: 757 agattacattatctataatctataaatatagaatatagataaatagacacacacatctag 816 Query: 201 atatattctagatcttcttttttgactatatattatatttttctgttttaacaaattcaa 260 |||||||||||||||||||| ||||||| ||||||| ||| ||||||||||||||| Sbjct: 817 atatattctagatcttctttcttgacta-----tatatttatctattttaacaaattcaa 871 Query: 261 tat 263 ||| Sbjct: 872 tat 874
>gb|AY912200.1| Schizostachyum brachycladum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1227 Score = 408 bits (206), Expect = e-111 Identities = 278/301 (92%), Gaps = 11/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||||||||||||||| | ||||||||||| ||||||| ||||| Sbjct: 903 cctaactttttctattatctattaatgtgcatctatccgta-----atattttggaatat 957 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 958 tatggaattagagaaatttg----cacgctttctcatttcattcgcgaggagctggatga 1013 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1014 gaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgac 1071 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 |||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||| Sbjct: 1072 tataaccccaaaagaaccagatttcgtaaacaacatagaagaagaatgaagggaaaatcc 1131 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1132 tgccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 1191 Query: 580 a 580 | Sbjct: 1192 a 1192 Score = 198 bits (100), Expect = 1e-47 Identities = 231/269 (85%), Gaps = 18/269 (6%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataa-----attaacaaataagnacaggnaaagn 58 ||||||||| ||||||||||||| |||||| |||| |||||||| ||||| |||| Sbjct: 627 aaaaaattgccttatttggtaaggttataatataaattagcaaataag-acagg-aaag- 683 Query: 59 agtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataag 118 |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 684 agtaaatattcgcccgcgaaatctttattgaattaaaatactttaccgcgattcaataag 743 Query: 119 agtaaaaataaggatatttttt----agaaggactacattattatctataaatatagaat 174 |||||||||||||| ||||||| |||| || ||||||| | | |||| ||||||||| Sbjct: 744 agtaaaaataaggagattttttgttaagaaagattacatta-tctatatatatatagaat 802 Query: 175 ttagataaatatccacacacatctggatatattctagatcttcttttttgactatatatt 234 |||||||||| ||||||||||| ||||||||||||||||||||| || |||| | Sbjct: 803 atagataaatagacacacacatctagatatattctagatcttctttctttacta-----t 857 Query: 235 atatttttctgttttaacaaattcaatat 263 |||||||||| ||||||||||||||||| Sbjct: 858 atatttttctagtttaacaaattcaatat 886
>gb|AY912192.1| Bambusa vulgaris ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1227 Score = 408 bits (206), Expect = e-111 Identities = 278/301 (92%), Gaps = 11/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||||||||||||||| | |||||||| || ||||||| ||||| Sbjct: 903 cctaactttttctattatctattaatgtgcatctatccata-----atattttggaatat 957 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 958 tatggaattagagaaatttg----cacgctttctcatttcattcgcgaggagctggatga 1013 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1014 gaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgac 1071 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1072 tataaccccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcc 1131 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1132 tgccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 1191 Query: 580 a 580 | Sbjct: 1192 a 1192 Score = 226 bits (114), Expect = 6e-56 Identities = 234/269 (86%), Gaps = 20/269 (7%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtt-----tataaattaacaaataagnacaggnaaagn 58 ||||||||| ||||||||||||| | |||||||||||||||||| ||||| |||| Sbjct: 629 aaaaaattgccttatttggtaaggttataatataaattaacaaataag-acagg-aaag- 685 Query: 59 agtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataag 118 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 686 agtaaatattcgcccgcgaaatctttattgaattagaatactttaccgcgattcaataag 745 Query: 119 agtaaaaataaggatatttttt----agaaggactacattattatctataaatatagaat 174 |||||||||||||| ||||||| |||| || ||| |||||| ||||||||||||| Sbjct: 746 agtaaaaataaggagattttttgttaagaaagattac---attatccataaatatagaat 802 Query: 175 ttagataaatatccacacacatctggatatattctagatcttcttttttgactatatatt 234 |||||||||| ||||||||||| ||||||||||||||||||||| ||||||| | Sbjct: 803 atagataaatagacacacacatctagatatattctagatcttctttcttgacta-----t 857 Query: 235 atatttttctgttttaacaaattcaatat 263 |||||| ||| |||||||||||||||||| Sbjct: 858 atatttatctattttaacaaattcaatat 886
>gb|AY847115.1| Streptogyna americana ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1160 Score = 404 bits (204), Expect = e-109 Identities = 273/295 (92%), Gaps = 11/295 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||| Sbjct: 870 cctaactttttctattatctattaatgtgtatctatccgta-----atattttggaatat 924 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 925 tatggaattagagaaatttg----cacgctttctcatttcattcgcgaggagctggatga 980 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 981 gaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgac 1038 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1039 tataaccccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcc 1098 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccg 574 | |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1099 tgccgaggcaatagtatttgttttggtagatatgctcttcaagcacttgaacccg 1153 Score = 228 bits (115), Expect = 2e-56 Identities = 232/265 (87%), Gaps = 17/265 (6%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| ||||||||||||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 608 aaaaaattgccttatttggtaaggttatgaattaacaaataag-acagg-aaag-agtaa 664 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 665 atattcgcccgcgaaatctttattgaattagaatactttaccgcgattcaataagagtaa 724 Query: 124 aaataaggatatttttt-----agaaggactacattattatctataaatatagaatttag 178 ||||||||| ||||||| |||| || ||| |||||||||||| ||||||| ||| Sbjct: 725 aaataaggagattttttttttaagaaagattac---attatctataaa-atagaatatag 780 Query: 179 ataaatatccacacacatctggatatattctagatcttcttttttgactatatattatat 238 ||||||| ||||||||||| ||||||||||||||||||||| || |||| ||||| Sbjct: 781 ataaataaacacacacatctagatatattctagatcttctttcttcacta-----tatat 835 Query: 239 ttttctgttttaacaaattcaatat 263 |||||| ||||||||||||| |||| Sbjct: 836 ttttctattttaacaaattccatat 860
>gb|AY912216.1| Streptogyna americana ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1172 Score = 404 bits (204), Expect = e-109 Identities = 273/295 (92%), Gaps = 11/295 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||| Sbjct: 882 cctaactttttctattatctattaatgtgtatctatccgta-----atattttggaatat 936 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 937 tatggaattagagaaatttg----cacgctttctcatttcattcgcgaggagctggatga 992 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 993 gaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgac 1050 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1051 tataaccccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcc 1110 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccg 574 | |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1111 tgccgaggcaatagtatttgttttggtagatatgctcttcaagcacttgaacccg 1165 Score = 184 bits (93), Expect = 2e-43 Identities = 233/275 (84%), Gaps = 26/275 (9%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| ||||||||||||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 609 aaaaaattgccttatttggtaaggttatgaattaacaaataag-acagg-aaag-agtaa 665 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaat-----aag 118 ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 666 atattcgcccgcgaaatctttattgaattagaatactttaccgcgattcaattcaataag 725 Query: 119 ag-----taaaaataaggatatttttt-----agaaggactacattattatctataaata 168 || |||||||||||| ||||||| |||| || ||||| |||||||||||| Sbjct: 726 agtaaaataaaaataaggagattttttttttaagaaagattacat---tatctataaata 782 Query: 169 tagaatttagataaatatccacacacatctggatatattctagatcttcttttttgacta 228 |||||| |||||||||| ||||||||||| ||||||||||||||||||||| || |||| Sbjct: 783 tagaatatagataaataaacacacacatctagatatattctagatcttctttcttcacta 842 Query: 229 tatattatatttttctgttttaacaaattcaatat 263 ||||||||||| ||||||||||||| |||| Sbjct: 843 -----tatatttttctattttaacaaattccatat 872
>gb|AF133487.1|AF133487 Puelia olyriformis ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1217 Score = 402 bits (203), Expect = e-109 Identities = 272/294 (92%), Gaps = 11/294 (3%) Strand = Plus / Plus Query: 287 ttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatattatggaa 346 |||||||||||||||||||| ||||||||||||| |||||||| |||||||||||| Sbjct: 914 ttttctattatctattaatgtgtatctatccgta-----atatttttgaatattatggaa 968 Query: 347 ttagagaaatttatttacatgctttctcattccattcgcgaggagctggatgagaagaaa 406 |||||||||||| || ||||||||||| |||||||||||||||||||||||||||| Sbjct: 969 ttagagaaatttg----cacgctttctcatttcattcgcgaggagctggatgagaagaaa 1024 Query: 407 ctctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgactataacc 466 |||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||| Sbjct: 1025 ctctcatgtccagttttgcagtagagatggaactaaaaaaga--accatcgactataacc 1082 Query: 467 ccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgag 526 |||||||||| |||||||| ||||||||||||||||||||||| |||||||||| ||||| Sbjct: 1083 ccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccgag 1142 Query: 527 gcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1143 gcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgga 1196 Score = 147 bits (74), Expect = 5e-32 Identities = 110/118 (93%), Gaps = 3/118 (2%) Strand = Plus / Plus Query: 15 ttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaaatattcgcccg 74 |||||||||||| |||| |||||||||||||| ||||| |||| |||||||||||||||| Sbjct: 662 ttatttggtaaggttatgaattaacaaataag-acagg-aaag-agtaaatattcgcccg 718 Query: 75 cgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 132 |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 719 cgaaatctttattggattagaatactttaccgcgattcaataagagtaaaaataagga 776 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%), Gaps = 5/88 (5%) Strand = Plus / Plus Query: 176 tagataaatatccacacacatctggatatattctagatcttcttttttgactatatatta 235 |||||||||| ||||||||||| ||||||||||||||||||||| ||||||| || Sbjct: 819 tagataaatagacacacacatctagatatattctagatcttctttcttgacta-----ta 873 Query: 236 tatttttctgttttaacaaattcaatat 263 ||||||||| ||||||||||| |||||| Sbjct: 874 tatttttctattttaacaaatccaatat 901
>gb|AY847072.1| Melica altissima ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1139 Score = 400 bits (202), Expect = e-108 Identities = 277/301 (92%), Gaps = 11/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 |||||||||||||||||||||||||| |||||||||| || |||||||| ||||| Sbjct: 829 cctaactttttctattatctattaatctgtatctatcccta-----atattttttaatat 883 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 |||| |||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 884 tatgaaattagagaaatttg----cacgctttctcatttcattcgcgaggagctggatga 939 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||| |||| |||||| ||||||||| Sbjct: 940 gaagaaactctcatgtccagttttgcagtagagatgggactacgaaaga--accatcgac 997 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 998 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaagggaaaatcc 1057 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1058 tgccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 1117 Query: 580 a 580 | Sbjct: 1118 a 1118 Score = 248 bits (125), Expect = 2e-62 Identities = 206/226 (91%), Gaps = 9/226 (3%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||||||||||||||||| ||||||||||||||||||| ||||| |||| ||||| Sbjct: 573 aaaaaattgtcttatttggtaagattataaattaacaaataag-acagg-aaag-agtaa 629 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 630 atattcgcccgcgaaatacttattgaattagaatactttaccgcgattcaataagagtaa 689 Query: 124 aaataa--ggatattttttagaaggactacattattatctataaatatagaatttagata 181 |||||| ||| ||||| ||||||| ||| |||||||||||| ||||||| |||||| Sbjct: 690 aaataaatagatttttttaagaaggattac---attatctataaa-atagaatatagata 745 Query: 182 aatatccacacacatctggatatattctagatcttcttttttgact 227 |||| || |||||||||||||||||||||||||||||| |||||| Sbjct: 746 aatagacatacacatctggatatattctagatcttctttcttgact 791
>gb|AY912205.1| Greslania rivularis ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1228 Score = 400 bits (202), Expect = e-108 Identities = 277/301 (92%), Gaps = 11/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||| ||||||||||||||||||||| | ||||||||||| ||||||| ||||| Sbjct: 905 cctaattttttctattatctattaatgtgcatctatccgta-----atattttggaatat 959 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 960 tatggaattagagaaatttg----cacgctttctcatttcattcgcgaggagctggatga 1015 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||| Sbjct: 1016 gaagaaactctcatgtccagttttgcactagagatggaactaagaaaga--accatcgac 1073 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1074 tataaccccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcc 1133 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1134 tgccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 1193 Query: 580 a 580 | Sbjct: 1194 a 1194 Score = 222 bits (112), Expect = 1e-54 Identities = 211/239 (88%), Gaps = 15/239 (6%) Strand = Plus / Plus Query: 29 tataaattaacaaataagnacaggnaaagnagtaaatattcgcccgcgaaattcttattg 88 |||||||||||||||||| ||||| |||| |||||||||||||||||||||| |||||| Sbjct: 661 tataaattaacaaataag-acagg-aaag-agtaaatattcgcccgcgaaatctttattg 717 Query: 89 aattagaatactttaccgcgattcaataagagtaaaaataaggatatttttt----agaa 144 ||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 718 aattagaatactttatcgcgattcaataagagtaaaaataaggagattttttgttaagaa 777 Query: 145 ggactacattattatctataaatatagaatttagataaatatccacacacatctggatat 204 || ||| |||||||||||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 778 agattac---attatctataaatatagaatatagataaatagacacacacatctagatat 834 Query: 205 attctagatcttcttttttgactatatattatatttttctgttttaacaaattcaatat 263 |||||||||||||||| ||||||| ||||||| ||| |||||||||||||||||| Sbjct: 835 attctagatcttctttcttgacta-----tatatttatctattttaacaaattcaatat 888
>gb|AY912193.1| Oxytenanthera abyssinica ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1222 Score = 400 bits (202), Expect = e-108 Identities = 277/301 (92%), Gaps = 11/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||||||||||||||| | |||||||| || ||||||| ||||| Sbjct: 898 cctaactttttctattatctattaatgtgcatctatccata-----atattttggaatat 952 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 ||||||||||||||||||| || | ||||||||| ||||||||||||||||||||| Sbjct: 953 tatggaattagagaaatttg----cacgttttctcatttcattcgcgaggagctggatga 1008 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1009 gaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgac 1066 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1067 tataaccccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcc 1126 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1127 tgccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 1186 Query: 580 a 580 | Sbjct: 1187 a 1187 Score = 226 bits (114), Expect = 6e-56 Identities = 234/269 (86%), Gaps = 20/269 (7%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtt-----tataaattaacaaataagnacaggnaaagn 58 ||||||||| ||||||||||||| | |||||||||||||||||| ||||| |||| Sbjct: 624 aaaaaattgccttatttggtaaggttataatataaattaacaaataag-acagg-aaag- 680 Query: 59 agtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataag 118 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 681 agtaaatattcgcccgcgaaatctttattgaattagaatactttaccgcgattcaataag 740 Query: 119 agtaaaaataaggatatttttt----agaaggactacattattatctataaatatagaat 174 |||||||||||||| ||||||| |||| || ||| |||||| ||||||||||||| Sbjct: 741 agtaaaaataaggagattttttgttaagaaagattac---attatccataaatatagaat 797 Query: 175 ttagataaatatccacacacatctggatatattctagatcttcttttttgactatatatt 234 |||||||||| ||||||||||| ||||||||||||||||||||| ||||||| | Sbjct: 798 atagataaatagacacacacatctagatatattctagatcttctttcttgacta-----t 852 Query: 235 atatttttctgttttaacaaattcaatat 263 |||||| ||| |||||||||||||||||| Sbjct: 853 atatttatctattttaacaaattcaatat 881
>gb|AF133471.1|AF133471 Glaziophyton mirabile ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1222 Score = 400 bits (202), Expect = e-108 Identities = 278/301 (92%), Gaps = 12/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||| ||||||||||| | ||||||||||| |||||||| ||||| Sbjct: 919 cctaactttttctat-atctattaatgtgcatctatccgta-----atatttttgaatat 972 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 973 tatggaattagagaaatttg----catgctttctcatttcattcgcgaggagctggatga 1028 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1029 gaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgac 1086 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1087 tataaccccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcc 1146 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1147 tgccgaggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttgg 1206 Query: 580 a 580 | Sbjct: 1207 a 1207 Score = 220 bits (111), Expect = 4e-54 Identities = 234/269 (86%), Gaps = 22/269 (8%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtt-----tataaattaacaaataagnacaggnaaagn 58 ||||||||| ||||||||||||| | |||||||||||||||||| ||||| |||| Sbjct: 647 aaaaaattgccttatttggtaaggttataatataaattaacaaataag-acagg-aaag- 703 Query: 59 agtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataag 118 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 704 agtaaatattcgcccgcgaaatccttattgaattagaatactttaccgcgattcaataag 763 Query: 119 agtaaaaataaggatatttttt----agaaggactacattattatctataaatatagaat 174 || |||||||||| ||||||| |||| || |||| |||||||||||||||||| Sbjct: 764 ag-caaaataaggagatttttttttaagaaagattaca----tatctataaatatagaat 818 Query: 175 ttagataaatatccacacacatctggatatattctagatcttcttttttgactatatatt 234 |||||||||| ||||||||||| ||||||||||||||||||||| ||||||| | Sbjct: 819 atagataaatagacacacacatctagatatattctagatcttctttcttgacta-----t 873 Query: 235 atatttttctgttttaacaaattcaatat 263 |||||||||| |||||||||||||||||| Sbjct: 874 atatttttctattttaacaaattcaatat 902
>gb|AF133475.1|AF133475 Avena sativa ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1187 Score = 398 bits (201), Expect = e-108 Identities = 244/257 (94%), Gaps = 6/257 (2%) Strand = Plus / Plus Query: 324 taatatttttaaatattatggaattagagaaatttatttacatgctttctcattccattc 383 |||||||||| |||||||||||||||||||||||| || ||||||||||| ||||| Sbjct: 916 taatatttttgaatattatggaattagagaaatttg----cacgctttctcatttcattc 971 Query: 384 gcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaactaag 443 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 972 gcgaggagctggatgagaagaaactctcatgtccagttttgcagtagagatggaactaag 1031 Query: 444 aaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagaggaag 503 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1032 aaaga--accatcgactataaccccaaaagaaccagatttcgcaaacaacatagaggaag 1089 Query: 504 aatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttcaagc 563 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1090 aatgaaaggaaaatcctgccgaggcaatcgtatttgttttggtagatatgctcttcaagc 1149 Query: 564 acttgaacccgcttgga 580 ||||||||| ||||||| Sbjct: 1150 acttgaacctgcttgga 1166 Score = 131 bits (66), Expect = 3e-27 Identities = 191/228 (83%), Gaps = 20/228 (8%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||| |||||||||||||| ||||||||||||||||||| |||| ||| ||||| Sbjct: 603 aaaaaattttcttatttggtaaggttataaattaacaaataag-acag--aaaagagtaa 659 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcga------ttcaataa 117 ||||||||||||||||| ||| | ||||||||||||||||| | |||||||| Sbjct: 660 atattcgcccgcgaaatccttttaaaattagaatactttaccattaccattattcaataa 719 Query: 118 gagtaaaaataaggatattttttagaaggactacattattatctataa-atatagaattt 176 |||||||||||| |||||||| |||| |||| | ||||||| ||||||||||| Sbjct: 720 gagtaaaaataaagatatttt----aagg-----attactctctataaaatatagaattt 770 Query: 177 agataa-atatccacacacatctggatatattctagatcttctttttt 223 |||||| ||| ||||||||||| |||||||||||||||||||||||| Sbjct: 771 agataatatagacacacacatctagatatattctagatcttctttttt 818 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/71 (90%), Gaps = 4/71 (5%) Strand = Plus / Plus Query: 164 aaatatagaatttagataa-atatccacacacatctggatatattctagatcttcttttt 222 ||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||| Sbjct: 758 aaatatagaatttagataatatagacacacacatctagatatattctagatcttcttttt 817 Query: 223 t---gactata 230 | ||||||| Sbjct: 818 ttttgactata 828
>gb|AY912213.1| Valiha diffusa ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1163 Score = 394 bits (199), Expect = e-106 Identities = 268/290 (92%), Gaps = 11/290 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||||||||||||||| | ||||||||||| ||||||| ||||| Sbjct: 885 cctaactttttctattatctattaatgtgcatctatccgta-----atattttggaatat 939 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 940 tatggaattagagaaatttg----cacgctttctcatttcattcgcgaggagctggatga 995 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 996 gaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgac 1053 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1054 tataaccccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcc 1113 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttga 569 | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1114 tgccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttga 1163 Score = 214 bits (108), Expect = 2e-52 Identities = 210/239 (87%), Gaps = 15/239 (6%) Strand = Plus / Plus Query: 29 tataaattaacaaataagnacaggnaaagnagtaaatattcgcccgcgaaattcttattg 88 |||||||||||||||||| ||||| |||| ||| |||||||||||||||||| |||||| Sbjct: 648 tataaattaacaaataag-acagg-aaag-agttaatattcgcccgcgaaatctttattg 704 Query: 89 aattagaatactttaccgcgattcaataagagtaaaaataaggatatttttt----agaa 144 |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 705 aattagaatactttaccgcgattcaataagagtaaaaataaggagattttttgttaagaa 764 Query: 145 ggactacattattatctataaatatagaatttagataaatatccacacacatctggatat 204 || ||| |||||||||||||||||||| | |||||||| ||||||||||| ||||| Sbjct: 765 agattac---attatctataaatatagaatatggataaatagacacacacatctagatat 821 Query: 205 attctagatcttcttttttgactatatattatatttttctgttttaacaaattcaatat 263 |||||||||||||||| ||||||| ||||||| ||| |||||||||||||||||| Sbjct: 822 attctagatcttctttcttgacta-----tatatttatctattttaacaaattcaatat 875
>gb|AF133486.1|AF133486 Molinia caerulea ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1211 Score = 392 bits (198), Expect = e-106 Identities = 276/301 (91%), Gaps = 11/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 |||||||||||||||||| |||| ||| ||||||||||||| |||| ||| ||||| Sbjct: 901 cctaactttttctattatatattgatgtgtatctatccgta-----atatctttgaatat 955 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 956 tatggaattagagaaatttg----cacgctttctcatttcattcgcgaggagctggatga 1011 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1012 gaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgac 1069 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 ||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1070 tataaccccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcc 1129 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1130 tgccgaggcaatcgtatttgttttggtagatatgctcttcaagtacttgaacccgcttgg 1189 Query: 580 a 580 | Sbjct: 1190 a 1190 Score = 131 bits (66), Expect = 3e-27 Identities = 114/126 (90%), Gaps = 3/126 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| |||||||||||| ||||||||||||||||||| ||||| |||| ||||| Sbjct: 657 aaaaaattgctttatttggtaaggttataaattaacaaataag-acagg-aaag-agtaa 713 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| |||||| |||| |||||||||| ||||||||||||||||| Sbjct: 714 atattcgcccgcgaaatctttattggattaagatactttaccacgattcaataagagtaa 773 Query: 124 aaataa 129 |||||| Sbjct: 774 aaataa 779 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 201 atatattctagatcttcttttttgactatatatt 234 |||||||||||||||||||| ||||||||||||| Sbjct: 834 atatattctagatcttctttcttgactatatatt 867
>gb|AF133474.1|AF133474 Poa pratensis ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1097 Score = 392 bits (198), Expect = e-106 Identities = 276/301 (91%), Gaps = 11/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||||||||||||||| |||||||||| || |||||||| ||||| Sbjct: 787 cctaactttttctattatctattaatgtgtatctatcccta-----atatttttgaatat 841 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 ||||||||||||||||||| || ||| ||||||| ||||||||||||||||||||| Sbjct: 842 tatggaattagagaaatttg----cacgctctctcatttcattcgcgaggagctggatga 897 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 || |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 898 gacgaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgac 955 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 956 tataacccgaaaagaaccagatttcgcaaacaacatcgaggaagaatgaaaggaaaatcc 1015 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 1016 tgccgaggcaatcgtatttgttttggtagatatgctcttcaagcactggaacctgcttgg 1075 Query: 580 a 580 | Sbjct: 1076 a 1076 Score = 157 bits (79), Expect = 5e-35 Identities = 115/123 (93%), Gaps = 3/123 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||||||||||||||||| ||||||||||||||||||| ||||| |||| ||||| Sbjct: 664 aaaaaattgtcttatttggtaaggttataaattaacaaataag-acagg-aaag-agtaa 720 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 721 atattcgcccgcgaaatccttattgaattagaatactttaccattattcaataagagtaa 780 Query: 124 aaa 126 ||| Sbjct: 781 aaa 783
>gb|AF133472.1|AF133472 Chusquea ramosissima ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1193 Score = 392 bits (198), Expect = e-106 Identities = 276/301 (91%), Gaps = 11/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||||||||||||||| | |||||| | || ||||||| ||||| Sbjct: 883 cctaactttttctattatctattaatgtgcatctatacata-----atattttggaatat 937 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 |||||||||||| |||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 938 tatggaattagataaatttg----cacgctttctcatttcattcgcgaggagctggatga 993 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 994 gaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgac 1051 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1052 tataaccccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcc 1111 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1112 taccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 1171 Query: 580 a 580 | Sbjct: 1172 a 1172 Score = 107 bits (54), Expect = 4e-20 Identities = 134/160 (83%), Gaps = 12/160 (7%) Strand = Plus / Plus Query: 108 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 163 |||||||||||||||||| |||||| ||||||| |||| || |||||||| |||| Sbjct: 723 gattcaataagagtaaaantaaggagatttttttttaagaaagattacattat---ctat 779 Query: 164 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 223 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 780 aaatatataatacggataaatagacacacacatctagatatattctagatcttctttctt 839 Query: 224 gactatatattatatttttctgttttaacaaattcaatat 263 ||||| ||||||||||| |||||||||||| ||||| Sbjct: 840 gacta-----tatatttttctattttaacaaattaaatat 874 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/82 (86%), Gaps = 8/82 (9%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtt-----tataaattaacaaataagnacaggnaaagn 58 ||||||||| ||||||||||||| | |||||||||||||||||| ||||| |||| Sbjct: 640 aaaaaattgccttatttggtaaggttataatataaattaacaaataag-acagg-aaag- 696 Query: 59 agtaaatattcgcccgcgaaat 80 |||||| ||||||||||||||| Sbjct: 697 agtaaacattcgcccgcgaaat 718
>gb|AF133468.1|AF133468 Schizostachyum luzonicum ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1225 Score = 392 bits (198), Expect = e-106 Identities = 277/301 (92%), Gaps = 12/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||| ||||||||||| | ||||||||||| ||||||| ||||| Sbjct: 916 cctaactttttctat-atctattaatgtgcatctatccgta-----atattttggaatat 969 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 970 tatggaattagagaaatttg----cacgctttctcatttcattcgcgaggagctggatga 1025 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1026 gaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgac 1083 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1084 tataaccccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcc 1143 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1144 tgccgaggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 1203 Query: 580 a 580 | Sbjct: 1204 a 1204 Score = 212 bits (107), Expect = 1e-51 Identities = 233/269 (86%), Gaps = 22/269 (8%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtt-----tataaattaacaaataagnacaggnaaagn 58 ||||||||| ||||||||||||| | |||||||||||||||||| ||||| |||| Sbjct: 651 aaaaaattgccttatttggtaaggttataatataaattaacaaataag-acagg-aaag- 707 Query: 59 agtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataag 118 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 708 agtaaatattcgcccgcgaaatctttattgaattagaatactttaccgcgattcaataag 767 Query: 119 agtaaaaataaggatatttttt----agaaggactacattattatctataaatatagaat 174 ||| |||||||||| ||||||| |||| || |||| |||||||||||||||||| Sbjct: 768 agt-aaaataaggagattttttgttaagaaagattaca----tatctataaatatagaat 822 Query: 175 ttagataaatatccacacacatctggatatattctagatcttcttttttgactatatatt 234 |||||||||| ||||||||||| ||||||||||||||||||||| ||||||| | Sbjct: 823 atagataaatagacacacacatctagatatattctagatcttctttcttgacta-----t 877 Query: 235 atatttttctgttttaacaaattcaatat 263 |||||| ||| |||||||||||||||||| Sbjct: 878 atatttatctattttaacaaattcaatat 906
>gb|AF133467.1|AF133467 Phyllostachys pubescens ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1232 Score = 392 bits (198), Expect = e-106 Identities = 276/301 (91%), Gaps = 11/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||||||||||||||| | |||||||| || ||||| |||||| Sbjct: 922 cctaactttttctattatctattaatgtgcatctatccata-----atattccaaaatat 976 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 977 tatggaattagagaaatttg----cacgctttctcatttcattcgcgaggagctggatga 1032 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1033 gaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgac 1090 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1091 tataaccccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcc 1150 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1151 tgccgaggcaatcgtatttgttttggtagatatgctctgcaagcacttgaacccgcttgg 1210 Query: 580 a 580 | Sbjct: 1211 a 1211 Score = 232 bits (117), Expect = 1e-57 Identities = 232/264 (87%), Gaps = 16/264 (6%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| ||||||||||||| ||||||||||||||||||| ||||| |||| ||||| Sbjct: 654 aaaaaattgccttatttggtaaggttataaattaacaaataag-acagg-aaag-agtaa 710 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 711 atattcgcccgcgaaatctttattgaattagaatactttcccgcgattcaataagagt-c 769 Query: 124 aaataaggatatttttt----agaaggactacattattatctataaatatagaatttaga 179 |||||||| ||||||| |||| || ||| |||||||||||||||||||| |||| Sbjct: 770 gaataaggagatttttttttaagaaagattac---attatctataaatatagaatataga 826 Query: 180 taaatatccacacacatctggatatattctagatcttcttttttgactatatattatatt 239 |||||| ||||||||||| ||||||||||||||||||||| ||||||| |||||| Sbjct: 827 taaatagacacacacatctagatatattctagatcttctttcttgacta-----tatatt 881 Query: 240 tttctgttttaacaaattcaatat 263 ||||| |||||||||||||||||| Sbjct: 882 tttctattttaacaaattcaatat 905
>gb|AF133466.1|AF133466 Pseudosasa japonica ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1225 Score = 392 bits (198), Expect = e-106 Identities = 276/301 (91%), Gaps = 11/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||||||||||||||| | |||||||| || ||||| |||||| Sbjct: 915 cctaactttttctattatctattaatgtgcatctatccata-----atattccaaaatat 969 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 970 tatggaattagagaaatttg----cacgctttctcatttcattcgcgaggagctggatga 1025 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1026 gaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgac 1083 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1084 tataaccccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcc 1143 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1144 tgccgaggcaatcgtatttgttttggtagatatgctctgcaagcacttgaacccgcttgg 1203 Query: 580 a 580 | Sbjct: 1204 a 1204 Score = 226 bits (114), Expect = 6e-56 Identities = 231/264 (87%), Gaps = 16/264 (6%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| ||||||||||||| ||||||||||||||||||| ||||| |||| ||||| Sbjct: 654 aaaaaattgccttatttggtaaggttataaattaacaaataag-acagg-aaag-agtaa 710 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||| Sbjct: 711 atattcgcccgcgaaatctttattgaattagantactttcccgcgattcaataagagt-c 769 Query: 124 aaataaggatatttttt----agaaggactacattattatctataaatatagaatttaga 179 ||||||||| ||||||| |||| || ||| |||||||||||||||||||| |||| Sbjct: 770 aaataaggagatttttttttaagaaagattac---attatctataaatatagaatataga 826 Query: 180 taaatatccacacacatctggatatattctagatcttcttttttgactatatattatatt 239 |||||| ||||||||||| ||||||||||||||||||||| ||||||| |||||| Sbjct: 827 taaatagacacacacatctagatatattctagatcttctttcttgacta-----tatatt 881 Query: 240 tttctgttttaacaaattcaatat 263 ||||| ||| |||||||||||||| Sbjct: 882 tttctatttgaacaaattcaatat 905
>gb|AF133459.1|AF133459 Ehrharta calycina ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1192 Score = 389 bits (196), Expect = e-105 Identities = 274/299 (91%), Gaps = 11/299 (3%) Strand = Plus / Plus Query: 286 tttttctattatctattaatgngtatctatccgtaccgt-----aatatttttaaatatt 340 ||||||||||||||||||||| |||||||||||| | ||||||||| |||||| Sbjct: 878 tttttctattatctattaatgtctatctatccgtaatatttttgaatatttttgaatatt 937 Query: 341 atggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatgag 400 ||||||||||| |||||| ||| |||||||||| |||||||||||||||||||||| Sbjct: 938 atggaattagataaatttg----catactttctcatttcattcgcgaggagctggatgag 993 Query: 401 aagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgact 460 |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 994 aagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgact 1051 Query: 461 ataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcct 520 ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1052 ataaccccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcct 1111 Query: 521 tccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1112 gccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 1170 Score = 139 bits (70), Expect = 1e-29 Identities = 109/118 (92%), Gaps = 3/118 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||||| |||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 632 aaaaaattgtcttatttgataaggttatgaattaacaaataag-acagg-aaag-agtaa 688 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagt 121 ||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||| Sbjct: 689 atattcgcccgcgaaatccttattgaattagaatactttaccgtgattcaataggagt 746 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattcta 210 |||||||||||| |||||||||| | ||||||||| ||||||||||| Sbjct: 789 taaatatagaatatagataaataaacgcacacatctagatatattcta 836
>gb|AF133476.1|AF133476 Brachyelytrum erectum ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1248 Score = 387 bits (195), Expect = e-104 Identities = 273/298 (91%), Gaps = 11/298 (3%) Strand = Plus / Plus Query: 283 aactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatattat 342 ||||||||||||||| |||||||| | |||||| |||| |||||||| |||||||| Sbjct: 947 aactttttctattatatattaatgtgcatctattcgta-----atatttttgaatattat 1001 Query: 343 ggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatgagaa 402 || ||||||||||||| || ||||||||||| |||||||||||||||||||||||| Sbjct: 1002 ggcattagagaaatttg----cacgctttctcatttcattcgcgaggagctggatgagaa 1057 Query: 403 gaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgactat 462 |||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||| Sbjct: 1058 gaaactctcatgtccagttttgcagtagagatggaactaagaaaga--actatcgactat 1115 Query: 463 aaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttc 522 ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| | Sbjct: 1116 aaccccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgc 1175 Query: 523 cgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1176 cgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgga 1233 Score = 135 bits (68), Expect = 2e-28 Identities = 107/116 (92%), Gaps = 3/116 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| ||||||||||||| ||||||||||||||||||| ||||| |||| ||||| Sbjct: 650 aaaaaattgccttatttggtaaggttataaattaacaaataag-acagg-aaag-agtaa 706 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataaga 119 ||||||||||||||||| |||||||||||||||||||||| | | ||||||||||| Sbjct: 707 atattcgcccgcgaaatccttattgaattagaatactttaacccaattcaataaga 762 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 162 ataaatatagaatttagataaatatccacacacatctggatatattctagatcttctttt 221 ||||||||||||| | |||||||| |||| |||| | ||||||||||| ||||||||| Sbjct: 805 ataaatatagaatatggataaatagacacaaacatttagatatattctaaatcttctttc 864 Query: 222 ttgactatatatt 234 ||||||||||||| Sbjct: 865 ttgactatatatt 877 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaa 304 ||||||||||||||||||||||||| Sbjct: 922 cctaactttttctattatctattaa 946
>gb|AF133465.1|AF133465 Arundinaria gigantea ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1225 Score = 387 bits (195), Expect = e-104 Identities = 275/301 (91%), Gaps = 11/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||||||||||||||| | |||||||| || ||||| |||||| Sbjct: 915 cctaactttttctattatctattaatgtgcatctatccata-----atattccaaaatat 969 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 970 tatggaattagagaaatttg----cacgctttctcatttcattcgcgaggagctggatga 1025 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1026 gaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgac 1083 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 |||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1084 tataaccccaaaagnaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcc 1143 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1144 tgccgaggcaatcgtatttgttttggtagatatgctctgcaagcacttgaacccgcttgg 1203 Query: 580 a 580 | Sbjct: 1204 a 1204 Score = 232 bits (117), Expect = 1e-57 Identities = 232/264 (87%), Gaps = 16/264 (6%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| ||||||||||||| ||||||||||||||||||| ||||| |||| ||||| Sbjct: 654 aaaaaattgccttatttggtaaggttataaattaacaaataag-acagg-aaag-agtaa 710 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 711 atattcgcccgcgaaatctttattgaattagaatactttcccgcgattcaataagagt-c 769 Query: 124 aaataaggatatttttt----agaaggactacattattatctataaatatagaatttaga 179 ||||||||| ||||||| |||| || ||| |||||||||||||||||||| |||| Sbjct: 770 aaataaggagatttttttttaagaaagattac---attatctataaatatagaatataga 826 Query: 180 taaatatccacacacatctggatatattctagatcttcttttttgactatatattatatt 239 |||||| ||||||||||| ||||||||||||||||||||| ||||||| |||||| Sbjct: 827 taaatagacacacacatctagatatattctagatcttctttcttgacta-----tatatt 881 Query: 240 tttctgttttaacaaattcaatat 263 ||||| ||| |||||||||||||| Sbjct: 882 tttctatttgaacaaattcaatat 905
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 379 bits (191), Expect = e-102 Identities = 277/302 (91%), Gaps = 8/302 (2%) Strand = Plus / Minus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 |||||||||||||||||| |||| ||| ||||||||| || |||||||||| ||||| Sbjct: 80116 cctaactttttctattatatattgatgtgtatctatc--ta---taatatttttgaatat 80062 Query: 340 tatggaattagagaaattt-atttacatgctttctcattccattcgcgaggagctggatg 398 ||||||||||||||||| ||| || ||||||||||| |||||||||||||||||||| Sbjct: 80061 tatggaattagagaaatgacattcgcacgctttctcatttcattcgcgaggagctggatg 80002 Query: 399 agaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcga 458 |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 80001 agaagaaactctcatgtccagttttgtagtagagatggaactaagaaaga--accatcga 79944 Query: 459 ctataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatc 518 |||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||| Sbjct: 79943 ctataaccccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatc 79884 Query: 519 cttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttg 578 || ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 79883 ctgccgaggcaatcatatttgttttggtagatatgctcttcaagtacttgaacccgcttg 79824 Query: 579 ga 580 || Sbjct: 79823 ga 79822 Score = 125 bits (63), Expect = 2e-25 Identities = 111/123 (90%), Gaps = 3/123 (2%) Strand = Plus / Minus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| ||||||| |||| || |||||||||||||||| ||||| |||| ||||| Sbjct: 80366 aaaaaattgctttatttgataaggttctaaattaacaaataag-acagg-aaag-agtaa 80310 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||| ||| Sbjct: 80309 atattcgcccgcgaaatccttattggattagaatactttaccacgattcaataagaataa 80250 Query: 124 aaa 126 ||| Sbjct: 80249 aaa 80247 Score = 75.8 bits (38), Expect = 1e-10 Identities = 51/54 (94%), Gaps = 1/54 (1%) Strand = Plus / Minus Query: 198 tggatatattctagatcttcttttttgactatatattatatttttctgttttaa 251 ||||||||||||||||||||||| ||||||||||||| ||||||||| |||||| Sbjct: 80195 tggatatattctagatcttctttcttgactatatatt-tatttttcttttttaa 80143
>gb|AF133477.1|AF133477 Zea mays ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1190 Score = 379 bits (191), Expect = e-102 Identities = 277/302 (91%), Gaps = 8/302 (2%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 |||||||||||||||||| |||| ||| ||||||||| || |||||||||| ||||| Sbjct: 875 cctaactttttctattatatattgatgtgtatctatc--ta---taatatttttgaatat 929 Query: 340 tatggaattagagaaattt-atttacatgctttctcattccattcgcgaggagctggatg 398 ||||||||||||||||| ||| || ||||||||||| |||||||||||||||||||| Sbjct: 930 tatggaattagagaaatgacattcgcacgctttctcatttcattcgcgaggagctggatg 989 Query: 399 agaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcga 458 |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 990 agaagaaactctcatgtccagttttgtagtagagatggaactaagaaaga--accatcga 1047 Query: 459 ctataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatc 518 |||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||| Sbjct: 1048 ctataaccccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatc 1107 Query: 519 cttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttg 578 || ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1108 ctgccgaggcaatcatatttgttttggtagatatgctcttcaagtacttgaacccgcttg 1167 Query: 579 ga 580 || Sbjct: 1168 ga 1169 Score = 117 bits (59), Expect = 4e-23 Identities = 110/123 (89%), Gaps = 3/123 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| ||||||| || | || |||||||||||||||| ||||| |||| ||||| Sbjct: 624 aaaaaattgctttatttgataggattctaaattaacaaataag-acagg-aaag-agtaa 680 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||| ||| Sbjct: 681 atattcgcccgcgaaatccttattggattagaatactttaccacgattcaataagaataa 740 Query: 124 aaa 126 ||| Sbjct: 741 aaa 743 Score = 75.8 bits (38), Expect = 1e-10 Identities = 51/54 (94%), Gaps = 1/54 (1%) Strand = Plus / Plus Query: 198 tggatatattctagatcttcttttttgactatatattatatttttctgttttaa 251 ||||||||||||||||||||||| ||||||||||||| ||||||||| |||||| Sbjct: 796 tggatatattctagatcttctttcttgactatatatt-tatttttcttttttaa 848
>gb|AF133458.1|AF133458 Leersia virginica ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1209 Score = 377 bits (190), Expect = e-101 Identities = 274/301 (91%), Gaps = 11/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 |||| ||||||||||| |||||||||| ||||||||||||| ||||||| ||||| Sbjct: 899 cctagctttttctattttctattaatgtgtatctatccgta-----atattttagaatat 953 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 ||||||||||||||||||| || |||||||||| |||||||||||||||||||| Sbjct: 954 tatggaattagagaaatttg----cacactttctcatttgattcgcgaggagctggatga 1009 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||| Sbjct: 1010 gaagaaactctcatgtccagttttgcagtagagatggaactaaga--gagaaccttcgac 1067 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1068 tataaccccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcc 1127 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1128 taccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccacttgg 1187 Query: 580 a 580 | Sbjct: 1188 a 1188 Score = 163 bits (82), Expect = 8e-37 Identities = 115/122 (94%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||||| |||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 629 aaaaaattgtcttatttgataaggttatgaattaacaaataag-acagg-aaag-agtaa 685 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 686 atattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataagagtaa 745 Query: 124 aa 125 || Sbjct: 746 aa 747 Score = 111 bits (56), Expect = 3e-21 Identities = 74/80 (92%) Strand = Plus / Plus Query: 155 attatctataaatatagaatttagataaatatccacacacatctggatatattctagatc 214 |||||||||||||||||||| |||||||||| || |||||||| ||||||||||||||| Sbjct: 787 attatctataaatatagaatatagataaataaacatacacatctagatatattctagatc 846 Query: 215 ttcttttttgactatatatt 234 |||||| ||||||||||||| Sbjct: 847 ttctttcttgactatatatt 866
>gb|AY847081.1| Phragmites australis ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1166 Score = 373 bits (188), Expect = e-100 Identities = 243/260 (93%), Gaps = 6/260 (2%) Strand = Plus / Plus Query: 321 ccgtaatatttttaaatattatggaattagagaaatttatttacatgctttctcattcca 380 ||||||||| ||| |||||||||||||||||||||||| || ||||||||||| || Sbjct: 892 ccgtaatatctttgaatattatggaattagagaaatttg----cacgctttctcatttca 947 Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 948 ttcgcgaggagctggatgagaagaaactctcatgtccagttttgcagtagagatggaact 1007 Query: 441 aagaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagagg 500 |||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 1008 aagaaaga--accatcgactataaccccaaaagaactagatttcgtaaacaacatagagg 1065 Query: 501 aagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttca 560 ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1066 aagaatgaagggaaaatcctgccgaggcaatcgtatttgttttggtagatatgctcttca 1125 Query: 561 agcacttgaacccgcttgga 580 || ||||||||||||||||| Sbjct: 1126 agtacttgaacccgcttgga 1145 Score = 147 bits (74), Expect = 5e-32 Identities = 117/126 (92%), Gaps = 4/126 (3%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||||||||||||||||| ||||||||||||||||||| ||||| |||| ||||| Sbjct: 624 aaaaaattgtcttatttggtaaggttataaattaacaaataag-acagg-aaag-agtaa 680 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| |||||| |||||||||||||| | ||||||||||||||||| Sbjct: 681 atattcgcccgcgaaatctttattggattagaatacttta-cacgattcaataagagtaa 739 Query: 124 aaataa 129 |||||| Sbjct: 740 aaataa 745 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 201 atatattctagatcttcttttttgactatatatt 234 |||||||||||||||||||| ||||||||||||| Sbjct: 797 atatattctagatcttctttcttgactatatatt 830
>gb|AY847074.1| Merxmuellera macowanii ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1077 Score = 373 bits (188), Expect = e-100 Identities = 243/260 (93%), Gaps = 6/260 (2%) Strand = Plus / Plus Query: 321 ccgtaatatttttaaatattatggaattagagaaatttatttacatgctttctcattcca 380 ||||||||||||| |||||||||||||||||||||||| || ||||||||||| || Sbjct: 803 ccgtaatatttttgaatattatggaattagagaaatttg----cacgctttctcatttca 858 Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 859 ttcgcgaggagctggatgagaagaaactctcatgtccagttttgcagtagagatggaact 918 Query: 441 aagaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagagg 500 |||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 919 aagaaaga--accatcgactataaccccaaaagaactagatttcgtaaacaacatagagg 976 Query: 501 aagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttca 560 ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 977 aagaatgaagggaaaatcctgccgaggcaatcgtatttgttttggtagatatgctcttca 1036 Query: 561 agcacttgaacccgcttgga 580 || ||||||||| ||||||| Sbjct: 1037 agtacttgaacctgcttgga 1056 Score = 141 bits (71), Expect = 3e-30 Identities = 116/127 (91%), Gaps = 3/127 (2%) Strand = Plus / Plus Query: 6 aaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaaat 65 ||||||| |||||||||||| ||||||||||||||||||| ||||| |||| ||||||| Sbjct: 623 aaaattgctttatttggtaaggttataaattaacaaataag-acagg-aaag-agtaaat 679 Query: 66 attcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaa 125 ||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||| Sbjct: 680 attcgcccgcgaaatctttattggattagaatactttaccatgattcaataagagtaaaa 739 Query: 126 ataagga 132 ||||||| Sbjct: 740 ataagga 746
>gb|AY912194.1| Chusquea bambusoides ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1174 Score = 373 bits (188), Expect = e-100 Identities = 234/248 (94%), Gaps = 6/248 (2%) Strand = Plus / Plus Query: 333 taaatattatggaattagagaaatttatttacatgctttctcattccattcgcgaggagc 392 |||||||||||||||||||||||||| || ||||||||||| |||||||||||||| Sbjct: 898 taaatattatggaattagagaaatttg----cacgctttctcatttcattcgcgaggagc 953 Query: 393 tggatgagaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaac 452 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 954 tggatgagaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--ac 1011 Query: 453 catcgactataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaagg 512 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 1012 catcgactataaccccaaaagaaccagatttcgtaaacaacatagaggaagaatgaaggg 1071 Query: 513 aaaatccttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacc 572 |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1072 aaaatcctgccgaggcagtcgtatttgttttggtagatatgctcttcaagcacttgaacc 1131 Query: 573 cgcttgga 580 |||||||| Sbjct: 1132 cgcttgga 1139 Score = 97.6 bits (49), Expect = 4e-17 Identities = 88/101 (87%), Gaps = 5/101 (4%) Strand = Plus / Plus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||| ||| ||||||||| ||||||||||| ||||||||||||||||||||| | Sbjct: 744 taaatatataatacagataaatagacacacacatctagatatattctagatcttctttct 803 Query: 223 tgactatatattatatttttctgttttaacaaattcaatat 263 |||||| ||||||||||| |||||||||||||||||| Sbjct: 804 tgacta-----tatatttttctattttaacaaattcaatat 839 Score = 67.9 bits (34), Expect = 3e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgta 320 ||||||||||||||||||||||||||| | ||||||||||| Sbjct: 856 cctaactttttctattatctattaatgtgcatctatccgta 896 Score = 60.0 bits (30), Expect = 8e-06 Identities = 72/82 (87%), Gaps = 8/82 (9%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtt-----tataaattaacaaataagnacaggnaaagn 58 ||||||||| ||||||||||||| | |||||||||||||||||| ||||| |||| Sbjct: 609 aaaaaattgccttatttggtaaggttataatataaattaacaaataag-acagg-aaag- 665 Query: 59 agtaaatattcgcccgcgaaat 80 |||||||||||||||||||||| Sbjct: 666 agtaaatattcgcccgcgaaat 687 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 108 gattcaataagagtaaaaataaggatatttttt 140 |||||||||||||||||||||||||||| |||| Sbjct: 692 gattcaataagagtaaaaataaggatatatttt 724
>gb|AF133485.1|AF133485 Arundo donax ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1207 Score = 373 bits (188), Expect = e-100 Identities = 243/260 (93%), Gaps = 6/260 (2%) Strand = Plus / Plus Query: 321 ccgtaatatttttaaatattatggaattagagaaatttatttacatgctttctcattcca 380 ||||||||| ||| ||||||||||||||||||||||||| || ||||||||||| || Sbjct: 933 ccgtaatatctttgaatattatggaattagagaaattta----cacgctttctcatttca 988 Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 989 ttcgcgaggagctggatgagaagaaactctcatgtccagttttgcagtagagatggaact 1048 Query: 441 aagaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagagg 500 |||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 1049 aagaaaga--accatcgactataaccccaaaagaactagatttcgtaaacaacatagagg 1106 Query: 501 aagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttca 560 ||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 1107 aagaatgaagggaaaatcctgccgaggcaatcgtatttgttttggtagatacgctcttca 1166 Query: 561 agcacttgaacccgcttgga 580 || ||||||||||||||||| Sbjct: 1167 agtacttgaacccgcttgga 1186 Score = 153 bits (77), Expect = 8e-34 Identities = 119/129 (92%), Gaps = 3/129 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| |||||||||||| ||||||||||||||||||| ||||| |||| ||||| Sbjct: 666 aaaaaattgctttatttggtaaggttataaattaacaaataag-acagg-aaag-agtaa 722 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||| Sbjct: 723 atattcgcccgcgaaatctttattggattagaatactttaccacgattcaataagagtaa 782 Query: 124 aaataagga 132 ||||||||| Sbjct: 783 aaataagga 791 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 198 tggatatattctagatcttcttttttgactatatatt 234 ||||||||||||||||||||||| ||||||||||||| Sbjct: 839 tggatatattctagatcttctttcttgactatatatt 875
>gb|AF133484.1|AF133484 Phragmites australis ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1199 Score = 373 bits (188), Expect = e-100 Identities = 243/260 (93%), Gaps = 6/260 (2%) Strand = Plus / Plus Query: 321 ccgtaatatttttaaatattatggaattagagaaatttatttacatgctttctcattcca 380 ||||||||| ||| |||||||||||||||||||||||| || ||||||||||| || Sbjct: 925 ccgtaatatctttgaatattatggaattagagaaatttg----cacgctttctcatttca 980 Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 981 ttcgcgaggagctggatgagaagaaactctcatgtccagttttgcagtagagatggaact 1040 Query: 441 aagaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagagg 500 |||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 1041 aagaaaga--accatcgactataaccccaaaagaactagatttcgtaaacaacatagagg 1098 Query: 501 aagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttca 560 ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1099 aagaatgaagggaaaatcctgccgaggcaatcgtatttgttttggtagatatgctcttca 1158 Query: 561 agcacttgaacccgcttgga 580 || ||||||||||||||||| Sbjct: 1159 agtacttgaacccgcttgga 1178 Score = 163 bits (82), Expect = 8e-37 Identities = 118/126 (93%), Gaps = 3/126 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||||||||||||||||| ||||||||||||||||||| ||||| |||| ||||| Sbjct: 655 aaaaaattgtcttatttggtaaggttataaattaacaaataag-acagg-aaag-agtaa 711 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||| Sbjct: 712 atattcgcccgcgaaatctttattggattagaatactttaccacgattcaataagagtaa 771 Query: 124 aaataa 129 |||||| Sbjct: 772 aaataa 777 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 201 atatattctagatcttcttttttgactatatatt 234 |||||||||||||||||||| ||||||||||||| Sbjct: 830 atatattctagatcttctttcttgactatatatt 863
>gb|AF133470.1|AF133470 Bambusa longispiculata ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1206 Score = 373 bits (188), Expect = e-100 Identities = 274/301 (91%), Gaps = 12/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||| ||||||||||| | |||||||| || ||||||| ||||| Sbjct: 917 cctaactttttctat-atctattaatgtgcatctatccata-----atattttggaatat 970 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 971 tatggaattagagaaatttg----cacgctttctcatttcattcgcgaggagctggatga 1026 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||| Sbjct: 1027 gaagaaactctcatgtccagttttgcagtagagatggaactaaganaga--accatcgac 1084 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1085 tataaccccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcc 1144 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1145 tnccgaggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttgg 1204 Query: 580 a 580 | Sbjct: 1205 a 1205 Score = 204 bits (103), Expect = 2e-49 Identities = 232/269 (86%), Gaps = 22/269 (8%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtt-----tataaattaacaaataagnacaggnaaagn 58 ||||||||||||||||||||||| | |||||||||||||||||| ||||| |||| Sbjct: 645 aaaaaattgtcttatttggtaaggttataatataaattaacaaataag-acagg-aaag- 701 Query: 59 agtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataag 118 |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| Sbjct: 702 agtaaatattcgcccgcgaaatctttattgaattagaatacttaaccgcgattcaataag 761 Query: 119 agtaaaaataaggatatttttt----agaaggactacattattatctataaatatagaat 174 ||| |||||||||| ||||||| |||| || ||| ||||| ||||||||||||| Sbjct: 762 agt-aaaataaggagattttttgttaagaaagattac----ttatccataaatatagaat 816 Query: 175 ttagataaatatccacacacatctggatatattctagatcttcttttttgactatatatt 234 |||||||||| ||||||||||| ||||||||||||||||||||| ||||||| | Sbjct: 817 atagataaatagacacacacatctagatatattctagatcttctttcttgacta-----t 871 Query: 235 atatttttctgttttaacaaattcaatat 263 |||||| ||| |||||||||||||||||| Sbjct: 872 atatttatctattttaacaaattcaatat 900
>gb|AF133469.1|AF133469 Nastus elatus ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1211 Score = 373 bits (188), Expect = e-100 Identities = 267/291 (91%), Gaps = 12/291 (4%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||| ||||||||||| | ||||||||||| ||||||| ||||| Sbjct: 922 cctaactttttctat-atctattaatgtgcatctatccgta-----atattttggaatat 975 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 976 tatggaattagagaaatttg----cacgctttctcatttcattcgcgaggagctggatga 1031 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1032 gaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgac 1089 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1090 tataaccccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcc 1149 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaa 570 | |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1150 tgccgaggcaattgtatttgttttggtagatatgctcttcaagcacttgaa 1200 Score = 212 bits (107), Expect = 1e-51 Identities = 233/269 (86%), Gaps = 22/269 (8%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtt-----tataaattaacaaataagnacaggnaaagn 58 ||||||||| ||||||||||||| | |||||||||||||||||| ||||| |||| Sbjct: 650 aaaaaattgccttatttggtaaggttataatataaattaacaaataag-acagg-aaag- 706 Query: 59 agtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataag 118 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 707 agtaaatattcgcccgcgaaatctttattgaattagaatactttaccgcgattcaataag 766 Query: 119 agtaaaaataaggatatttttt----agaaggactacattattatctataaatatagaat 174 ||| |||||||||| ||||||| |||| || |||| |||||||||||||||||| Sbjct: 767 agt-aaaataaggagattttttgttaagaaagattaca----tatctataaatatagaat 821 Query: 175 ttagataaatatccacacacatctggatatattctagatcttcttttttgactatatatt 234 |||||||||| ||||||||||| ||||||||||||||||||||| ||||||| | Sbjct: 822 atagataaatagacacacacatctagatatattctagatcttctttcttgacta-----t 876 Query: 235 atatttttctgttttaacaaattcaatat 263 |||||| ||| |||||||||||||||||| Sbjct: 877 atatttatctattttaacaaattcaatat 905
>gb|AF133462.1|AF133462 Pariana radiciflora ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1262 Score = 373 bits (188), Expect = e-100 Identities = 263/287 (91%), Gaps = 11/287 (3%) Strand = Plus / Plus Query: 294 ttatctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagaga 353 ||||||||||||| | |||||| |||||||||||| |||||||||||||||||||| Sbjct: 966 ttatctattaatgtgcatctat-----ccgtaatattttaaaatattatggaattagaga 1020 Query: 354 aatttatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcat 413 |||| || ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1021 ----gatttgcacgctttctcatttcattcgcgaggagctggatgagaagaaactctcat 1076 Query: 414 gtccagttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaag 473 ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1077 gtccagttttgcagtagagatggaactaagaa--agaaccatcgactataaccccaaaag 1134 Query: 474 aaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcg 533 |||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||| | Sbjct: 1135 aaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccgaggcaattg 1194 Query: 534 tatttgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 ||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1195 tatttgttttggtagatatgctcttcaagcacttgaacctgcttgga 1241 Score = 113 bits (57), Expect = 7e-22 Identities = 75/81 (92%) Strand = Plus / Plus Query: 154 tattatctataaatatagaatttagataaatatccacacacatctggatatattctagat 213 ||||||||||||||||||||| |||||||||| |||| |||||| |||||||||||||| Sbjct: 807 tattatctataaatatagaatatagataaatagacacagacatctagatatattctagat 866 Query: 214 cttcttttttgactatatatt 234 ||||||| ||||||||||||| Sbjct: 867 cttctttcttgactatatatt 887 Score = 107 bits (54), Expect = 4e-20 Identities = 125/141 (88%), Gaps = 11/141 (7%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| ||||||| ||| ||||||||||||||||||| ||||| |||| ||||| Sbjct: 654 aaaaaattgncttattt---aaggttataaattaacaaataag-acagg-aaag-agtaa 707 Query: 64 atattcgcccgcgaaattcttatt--gaatta--gaatactttaccgcgattcaataaga 119 ||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||| Sbjct: 708 atattcgcccgcgaaatccttattaagaattaaagaatactttaccgcgattcaataaga 767 Query: 120 gtaaaaataaggatatttttt 140 || ||||||||| ||||||| Sbjct: 768 gt-caaataaggagatttttt 787
>gb|AF133492.1|AF133492 Humbertochloa greenwayi ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1218 Score = 371 bits (187), Expect = 2e-99 Identities = 268/294 (91%), Gaps = 11/294 (3%) Strand = Plus / Plus Query: 287 ttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatattatggaa 346 ||||||| |||||||||||| ||||||||||||| ||||||| |||||| ||||| Sbjct: 921 ttttctagtatctattaatgtgtatctatccgta-----atattttggaatattctggaa 975 Query: 347 ttagagaaatttatttacatgctttctcattccattcgcgaggagctggatgagaagaaa 406 |||||||| ||| || |||||||||| |||||||||||||||||||||||||||| Sbjct: 976 ttagagaagtttg----cacactttctcatttcattcgcgaggagctggatgagaagaaa 1031 Query: 407 ctctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgactataacc 466 |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 1032 ctctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgactataacc 1089 Query: 467 ccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgag 526 ||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||| Sbjct: 1090 ccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccgag 1149 Query: 527 gcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 ||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1150 gcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccacttgga 1203 Score = 131 bits (66), Expect = 3e-27 Identities = 111/122 (90%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||| ||| |||||||| |||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 651 aaaaagttgccttatttgataaggttatgaattaacaaataag-acagg-aaag-agtaa 707 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 708 atattcgcccgcgaaatctttattgaattagagtactttaccgcgattcaataagagtaa 767 Query: 124 aa 125 || Sbjct: 768 aa 769 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| ||||||||||| ||||||||||||||| ||||| | Sbjct: 811 taaatatagaatatagataaataaacacacacatctagatatattctagatcgtctttct 870 Query: 223 tgactata 230 || ||||| Sbjct: 871 tggctata 878
>gb|AY847083.1| Paspalum conjugatum ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1157 Score = 369 bits (186), Expect = 7e-99 Identities = 272/300 (90%), Gaps = 7/300 (2%) Strand = Plus / Plus Query: 281 ctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatatt 340 ||||||||||||||||| |||| ||| |||||||||| || ||||||| |||||| Sbjct: 846 ctaactttttctattatatattgatgtgtatctatccata-----atattttggaatatt 900 Query: 341 atggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatgag 400 ||||||||| | ||| ||| ||| ||||||||||| |||||||||||||||||||||| Sbjct: 901 atggaattaaataaagaaattcacacgctttctcatttcattcgcgaggagctggatgag 960 Query: 401 aagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgact 460 |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| | Sbjct: 961 aagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgagt 1018 Query: 461 ataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcct 520 |||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1019 ataaccccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcct 1078 Query: 521 tccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1079 gccgaggcaatcgtatttgttttggtagatatgctcttcaagtacttgaacccgcttgga 1138 Score = 69.9 bits (35), Expect = 9e-09 Identities = 105/126 (83%), Gaps = 13/126 (10%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| ||||||| |||| || |||||||||||||||| ||||| |||| ||||| Sbjct: 621 aaaaaattgctttatttgataaggttctaaattaacaaataag-acagg-aaag-agtaa 677 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| |||| |||||||||| ||||||||||||| ||| Sbjct: 678 atattcgcccgcgaaatcctta----------atactttaccacgattcaataagaataa 727 Query: 124 aaataa 129 |||||| Sbjct: 728 aaataa 733 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 198 tggatatattctagatcttcttttttgactatatatt 234 |||||||| |||||||||||||| ||||||||||||| Sbjct: 776 tggatatactctagatcttctttcttgactatatatt 812
>gb|AF133461.1|AF133461 Buergersiochloa bambusoides ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1216 Score = 369 bits (186), Expect = 7e-99 Identities = 273/301 (90%), Gaps = 11/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 906 cctaactttttctattatctattaatgtacatctatccgta-----atatttttgaatat 960 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 |||| |||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 961 tatgaaattagagaaatttg----cacgctttctcatttcattcgcgaggagctggatga 1016 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||| Sbjct: 1017 gaagaaactctcatgtccagttttgcaatagagatggaactaagaaaga--accatcgat 1074 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 |||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||| Sbjct: 1075 tataaccccaaaagaaccagtattcgtaaacaacatagaggaagaatgaagggaaaatcc 1134 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1135 taccgaggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 1194 Query: 580 a 580 | Sbjct: 1195 a 1195 Score = 242 bits (122), Expect = 1e-60 Identities = 231/260 (88%), Gaps = 13/260 (5%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| ||||||||||||| ||||||||||||||||||| ||||| |||| ||||| Sbjct: 645 aaaaaattgccttatttggtaaggttataaattaacaaataag-acagg-aaag-agtaa 701 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 702 atattcgcccgcgaaatccttattgaattagaatactttaccgcgattcaataagagt-a 760 Query: 124 aaataaggatattttttagaaggactacattattatctataaatatagaatttagataaa 183 ||||||||| ||||||| | | |||||| ||||||||||||||||| |||||||| Sbjct: 761 aaataaggagattttttttta-taatacatt---atctataaatatagaatatagataaa 816 Query: 184 tatccacacacatctggatatattctagatcttcttttttgactatatattatatttttc 243 || ||||||||||| |||||||||| |||||||||| ||||||| |||||||||| Sbjct: 817 tagacacacacatctagatatattctggatcttctttcttgacta-----tatatttttc 871 Query: 244 tgttttaacaaattcaatat 263 | |||||||||||||||||| Sbjct: 872 tattttaacaaattcaatat 891
>gb|AY912197.1| Neurolepis nana ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1230 Score = 367 bits (185), Expect = 3e-98 Identities = 278/307 (90%), Gaps = 13/307 (4%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||||||||||||||| | |||||||| |||||||||| ||||| Sbjct: 896 cctaactttttctattatctattaatgtgcatctatcc-----gtaatattttggaatat 950 Query: 340 tat-----ggaattagagaa-atttatttacatgctttctcattccattcgcgaggagct 393 ||| |||||||||| | | |||| || ||||||||||| ||||||||||||||| Sbjct: 951 tatattatggaattagagtagagaaatttgcacgctttctcatttcattcgcgaggagct 1010 Query: 394 ggatgagaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaacc 453 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 1011 ggatgagaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--acc 1068 Query: 454 atcgactataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaagga 513 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 1069 atcgactataaccccaaaagaaccagatttcgtaaacaacatagaggaagaatgaaggga 1128 Query: 514 aaatccttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaaccc 573 ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1129 aaatcttgccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaaccc 1188 Query: 574 gcttgga 580 ||||||| Sbjct: 1189 gcttgga 1195 Score = 117 bits (59), Expect = 4e-23 Identities = 135/159 (84%), Gaps = 11/159 (6%) Strand = Plus / Plus Query: 108 gattcaataagagtaaaaataaggatatttttt---agaaggactacattattatctata 164 ||||||||||||||||||||||||| ||||||| |||| || |||||||| ||||| Sbjct: 731 gattcaataagagtaaaaataaggagatttttttttagaaagattacattat---ctata 787 Query: 165 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 224 |||||| ||| ||||||||| ||||| ||||| ||||||||||||||||||||| ||| Sbjct: 788 aatatataatacagataaatagacacacgcatctagatatattctagatcttctttcttg 847 Query: 225 actatatattatatttttctgttttaacaaattcaatat 263 |||| ||||||||||| |||||||||||| ||||| Sbjct: 848 acta-----tatatttttctattttaacaaatttaatat 881 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/82 (85%), Gaps = 8/82 (9%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataa-----attaacaaataagnacaggnaaagn 58 ||||||||| ||||||||||||| |||||| ||||||||||||| |||| ||| Sbjct: 648 aaaaaattgccttatttggtaaggttataatataaattaacaaataag-acag--aaaag 704 Query: 59 agtaaatattcgcccgcgaaat 80 |||||||||||||||||||||| Sbjct: 705 agtaaatattcgcccgcgaaat 726
>gb|AY847085.1| Arundinella hirta ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1186 Score = 363 bits (183), Expect = 4e-97 Identities = 275/302 (91%), Gaps = 8/302 (2%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 |||||||||||||||||| |||| ||| ||||| ||| || |||||||||| ||||| Sbjct: 871 cctaactttttctattatatattgatgtgtatccatc--ta---taatatttttgaatat 925 Query: 340 tatggaattagagaaatttattta-catgctttctcattccattcgcgaggagctggatg 398 ||||||||||||||||| | || || ||||||||||| |||||||||||||||||||| Sbjct: 926 tatggaattagagaaatgaaattcgcacgctttctcatttcattcgcgaggagctggatg 985 Query: 399 agaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcga 458 |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 986 agaagaaactctcatgtccagttttgtagtagagatggaactaagaaaga--accatcga 1043 Query: 459 ctataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatc 518 |||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||| Sbjct: 1044 ctataaccccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatc 1103 Query: 519 cttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttg 578 || |||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1104 ctgccgaggtaatcatatttgttttggtagatatgctcttcaagtacttgaacccgcttg 1163 Query: 579 ga 580 || Sbjct: 1164 ga 1165 Score = 79.8 bits (40), Expect = 9e-12 Identities = 105/123 (85%), Gaps = 9/123 (7%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| ||||||| ||| || |||||||||||||||| ||||| |||| ||||| Sbjct: 627 aaaaaattgctttatttgataaagttctaaattaacaaataag-acagg-aaag-agtaa 683 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| || |||||||||||||||| ||||||||||||| ||| Sbjct: 684 atattcgcccgcgaaatcct------attagaatactttaccacgattcaataagaataa 737 Query: 124 aaa 126 ||| Sbjct: 738 aaa 740 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 201 atatattctagatcttcttttttgactatatatt 234 |||||||||||||||||||| ||||||||||||| Sbjct: 797 atatattctagatcttctttcttgactatatatt 830
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 363 bits (183), Expect = 4e-97 Identities = 275/302 (91%), Gaps = 8/302 (2%) Strand = Plus / Minus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 |||||||||||||||||| |||| ||| ||| ||||| || ||||||||| ||||| Sbjct: 1201 cctaactttttctattatatattgatgtgtacctatc--ta---taatattttggaatat 1147 Query: 340 tatggaattagagaaatttattta-catgctttctcattccattcgcgaggagctggatg 398 ||||||||||||||||| | || || ||||||||||| |||||||||||||||||||| Sbjct: 1146 tatggaattagagaaatgaaattcgcacgctttctcatttcattcgcgaggagctggatg 1087 Query: 399 agaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcga 458 |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 1086 agaagaaactctcatgtccagttttgtagtagagatggaactaagaaaga--accatcga 1029 Query: 459 ctataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatc 518 |||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||| Sbjct: 1028 ctataaccccaaaagaactagatttcgtaaacaacatagaggaagaatgaatggaaaatc 969 Query: 519 cttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttg 578 || ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 968 ctgccgaggcaatcatatttgttttggtagatatgctcttcaagtacttgaacccgcttg 909 Query: 579 ga 580 || Sbjct: 908 ga 907 Score = 129 bits (65), Expect = 1e-26 Identities = 116/129 (89%), Gaps = 3/129 (2%) Strand = Plus / Minus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| ||||||| |||| || |||||||||||||||| ||||| |||| ||||| Sbjct: 1445 aaaaaattgctttatttgataaggttctaaattaacaaataag-acagg-aaag-agtaa 1389 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||| ||| Sbjct: 1388 atattcgcccgcgaaatccttattggattagaatactttaccacgattcaataagaataa 1329 Query: 124 aaataagga 132 ||| ||||| Sbjct: 1328 aaaaaagga 1320 Score = 73.8 bits (37), Expect = 6e-10 Identities = 56/61 (91%), Gaps = 1/61 (1%) Strand = Plus / Minus Query: 200 gatatattctagatcttcttttttgactatatattatatttttctgttttaacaaattca 259 ||||||||||||||||||||| ||||||||||||| ||||||||| |||||| ||| ||| Sbjct: 1273 gatatattctagatcttctttcttgactatatatt-tatttttcttttttaagaaagtca 1215 Query: 260 a 260 | Sbjct: 1214 a 1214
>gb|AF133478.1|AF133478 Sorghum bicolor ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1200 Score = 363 bits (183), Expect = 4e-97 Identities = 241/258 (93%), Gaps = 3/258 (1%) Strand = Plus / Plus Query: 324 taatatttttaaatattatggaattagagaaatttattta-catgctttctcattccatt 382 |||||||||| |||||||||||||||||||||| | || || ||||||||||| |||| Sbjct: 924 taatatttttgaatattatggaattagagaaatgaaattcgcacgctttctcatttcatt 983 Query: 383 cgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaactaa 442 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 984 cgcgaggagctggatgagaagaaactctcatgtccagttttgtagtagagatggaactaa 1043 Query: 443 gaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagaggaa 502 |||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 1044 gaaaga--accatcgactataaccccaaaagaactagatttcgtaaacaacatagaggaa 1101 Query: 503 gaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttcaag 562 ||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1102 gaatgaagggaaaatcctgccgaggcaatcatatttgttttggtagatatgctcttcaag 1161 Query: 563 cacttgaacccgcttgga 580 ||||||||||||||||| Sbjct: 1162 tacttgaacccgcttgga 1179 Score = 73.8 bits (37), Expect = 6e-10 Identities = 56/61 (91%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 200 gatatattctagatcttcttttttgactatatattatatttttctgttttaacaaattca 259 ||||||||||||||||||||| ||||||||||||| ||||||||| |||||| ||| ||| Sbjct: 815 gatatattctagatcttctttcttgactatatatt-tatttttcttttttaagaaagtca 873 Query: 260 a 260 | Sbjct: 874 a 874 Score = 69.9 bits (35), Expect = 9e-09 Identities = 95/112 (84%), Gaps = 11/112 (9%) Strand = Plus / Plus Query: 15 ttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaaatattcgcccg 74 ||||||| |||| || |||||||||||||||| ||||| |||| |||||||||||||||| Sbjct: 662 ttatttgataaggttctaaattaacaaataag-acagg-aaag-agtaaatattcgcccg 718 Query: 75 cgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaa 126 |||||| | ||||||||||||||| ||||||||||||| |||||| Sbjct: 719 cgaaatcc--------ttagaatactttaccacgattcaataagaataaaaa 762
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 363 bits (183), Expect = 4e-97 Identities = 275/302 (91%), Gaps = 8/302 (2%) Strand = Plus / Minus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 |||||||||||||||||| |||| ||| ||| ||||| || ||||||||| ||||| Sbjct: 80758 cctaactttttctattatatattgatgtgtacctatc--ta---taatattttggaatat 80704 Query: 340 tatggaattagagaaatttattta-catgctttctcattccattcgcgaggagctggatg 398 ||||||||||||||||| | || || ||||||||||| |||||||||||||||||||| Sbjct: 80703 tatggaattagagaaatgaaattcgcacgctttctcatttcattcgcgaggagctggatg 80644 Query: 399 agaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcga 458 |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 80643 agaagaaactctcatgtccagttttgtagtagagatggaactaagaaaga--accatcga 80586 Query: 459 ctataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatc 518 |||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||| Sbjct: 80585 ctataaccccaaaagaactagatttcgtaaacaacatagaggaagaatgaatggaaaatc 80526 Query: 519 cttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttg 578 || ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 80525 ctgccgaggcaatcatatttgttttggtagatatgctcttcaagtacttgaacccgcttg 80466 Query: 579 ga 580 || Sbjct: 80465 ga 80464 Score = 129 bits (65), Expect = 1e-26 Identities = 116/129 (89%), Gaps = 3/129 (2%) Strand = Plus / Minus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| ||||||| |||| || |||||||||||||||| ||||| |||| ||||| Sbjct: 81002 aaaaaattgctttatttgataaggttctaaattaacaaataag-acagg-aaag-agtaa 80946 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||| ||| Sbjct: 80945 atattcgcccgcgaaatccttattggattagaatactttaccacgattcaataagaataa 80886 Query: 124 aaataagga 132 ||| ||||| Sbjct: 80885 aaaaaagga 80877 Score = 73.8 bits (37), Expect = 6e-10 Identities = 56/61 (91%), Gaps = 1/61 (1%) Strand = Plus / Minus Query: 200 gatatattctagatcttcttttttgactatatattatatttttctgttttaacaaattca 259 ||||||||||||||||||||| ||||||||||||| ||||||||| |||||| ||| ||| Sbjct: 80830 gatatattctagatcttctttcttgactatatatt-tatttttcttttttaagaaagtca 80772 Query: 260 a 260 | Sbjct: 80771 a 80771
>gb|AY847093.1| Thysanolaena latifolia ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1182 Score = 361 bits (182), Expect = 2e-96 Identities = 272/301 (90%), Gaps = 11/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 |||||||||||||||||| |||| ||| ||||||||||||| |||||||| ||||| Sbjct: 872 cctaactttttctattatatattgatgtgtatctatccgta-----atatttttgaatat 926 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 || ||||||||||||||| | || ||||| ||||| |||||| |||||||||||||| Sbjct: 927 tacggaattagagaaattga----cacgctttatcatttcattcgtgaggagctggatga 982 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 983 gaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgac 1040 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 ||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1041 tataaccccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcc 1100 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | ||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||| Sbjct: 1101 tgccgaggcaatcgtatctgttttggtagatatgctcttcaagtacttgaaccagcttgg 1160 Query: 580 a 580 | Sbjct: 1161 a 1161 Score = 89.7 bits (45), Expect = 1e-14 Identities = 111/128 (86%), Gaps = 5/128 (3%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| |||||||||||| ||||||||||||||||| | ||||| |||| ||||| Sbjct: 633 aaaaaattgctttatttggtaaggttataaattaacaaatatg-acagg-aaag-agtaa 689 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 || ||| |||||||||| |||||| |||| |||||||| | ||||||||||||| ||| Sbjct: 690 attttcccccgcgaaatctttattggattataatacttt--cacgattcaataagaataa 747 Query: 124 aaataagg 131 |||||||| Sbjct: 748 aaataagg 755 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 198 tggatatattctagatcttcttttttgactatatatt 234 ||||||||||||||||||||||| |||||||| |||| Sbjct: 804 tggatatattctagatcttctttcttgactatctatt 840
>gb|AY847091.1| Gynerium sagittatum ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1184 Score = 361 bits (182), Expect = 2e-96 Identities = 272/301 (90%), Gaps = 11/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 |||||||||||||||||| |||| ||| |||||||||| || ||||| |||||| Sbjct: 874 cctaactttttctattatatattgatgtgtatctatccata-----atattccaaaatat 928 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 |||||||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 929 tatggaattagagaaattcg----cacgctttctcatttcattcgcgaggagctggatga 984 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||| Sbjct: 985 gaagaaactctcatgtccagttttgcagtagagatggaactaagaaaaa--accatcgac 1042 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 ||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1043 tataaccccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcc 1102 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1103 tgccgaggcaatcgtatttgttttggtagatatgctcttcaagtacttgaacccgcttgg 1162 Query: 580 a 580 | Sbjct: 1163 a 1163 Score = 109 bits (55), Expect = 1e-20 Identities = 110/123 (89%), Gaps = 4/123 (3%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| |||||||||||| || |||||||||||||||| ||||| |||| ||||| Sbjct: 631 aaaaaattgctttatttggtaaggttctaaattaacaaataag-acagg-aaag-agtaa 687 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| ||||||| ||||||| |||||| | ||||||||||||| ||| Sbjct: 688 atattcgcccgcgaaatccttattggattagaaaacttta-cacgattcaataagaataa 746 Query: 124 aaa 126 ||| Sbjct: 747 aaa 749 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 198 tggatatattctagatcttcttttttgactatatatt 234 ||||||||||||||||||||||| || |||||||||| Sbjct: 802 tggatatattctagatcttctttctttactatatatt 838
>gb|AY912214.1| Temburongia simplex ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1075 Score = 361 bits (182), Expect = 2e-96 Identities = 259/284 (91%), Gaps = 11/284 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||||||||||||||| | ||||||||||| ||||||| ||||| Sbjct: 800 cctaactttttctattatctattaatgtgcatctatccgta-----atattttggaatat 854 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 855 tatggaattagagaaatttg----catgctttctcatttcattcgcgaggagctggatga 910 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 911 gaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgac 968 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| || Sbjct: 969 tataaccccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaacccc 1028 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagc 563 | |||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 1029 tgccgaagcaatcgtatttgttttggtanatatgctcttcaagc 1072 Score = 214 bits (108), Expect = 2e-52 Identities = 210/239 (87%), Gaps = 15/239 (6%) Strand = Plus / Plus Query: 29 tataaattaacaaataagnacaggnaaagnagtaaatattcgcccgcgaaattcttattg 88 |||||||||||||||||| ||||| |||| ||||| |||||||||||||||| |||||| Sbjct: 556 tataaattaacaaataag-acagg-aaag-agtaattattcgcccgcgaaatctttattg 612 Query: 89 aattagaatactttaccgcgattcaataagagtaaaaataaggatatttttt----agaa 144 ||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||| Sbjct: 613 aattagaatactttaccgcgattcaataagagtaaaattaaggagattttttgttaagaa 672 Query: 145 ggactacattattatctataaatatagaatttagataaatatccacacacatctggatat 204 || ||| |||||||||||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 673 agattac---attatctataaatatagaatatagataaatagacacacacatctagatat 729 Query: 205 attctagatcttcttttttgactatatattatatttttctgttttaacaaattcaatat 263 |||||||||||||||| ||||||| ||||||| ||| |||||||||||||||||| Sbjct: 730 attctagatcttctttcttgacta-----tatatttatctattttaacaaattcaatat 783
>gb|AF133463.1|AF133463 Sucrea maculata ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1190 Score = 361 bits (182), Expect = 2e-96 Identities = 241/260 (92%), Gaps = 6/260 (2%) Strand = Plus / Plus Query: 321 ccgtaatatttttaaatattatggaattagagaaatttatttacatgctttctcattcca 380 ||||||||||||| |||||||||||||||||||||||| || ||||||||||| | Sbjct: 933 ccgtaatatttttgaatattatggaattagagaaatttg----cacgctttctcatttna 988 Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 |||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||| Sbjct: 989 ttcgcgaggagctggatgagaagaaactttcatgtccagttttgcagtagagatgaaact 1048 Query: 441 aagaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagagg 500 |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1049 aagaaaga--accatcgactataaccccaaaagaaccagatttcgtaaacaacatagagg 1106 Query: 501 aagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttca 560 ||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 1107 aagaatgaagggaaaatcctnccgaggcaattgtatttgttttggtagatatgctcttca 1166 Query: 561 agcacttgaacccgcttgga 580 ||||||||||||| |||||| Sbjct: 1167 agcacttgaacccacttgga 1186 Score = 161 bits (81), Expect = 3e-36 Identities = 127/137 (92%), Gaps = 4/137 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||||||||||||||||| ||||||||||||||||||| ||||| |||| ||||| Sbjct: 642 aaaaaattgtcttatttggtaaggttataaattaacaaataag-acagg-aaag-agtaa 698 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||| Sbjct: 699 atattcgcccgcgaaatccttattgaattagaatactttactgtgattcaataagagt-c 757 Query: 124 aaataaggatatttttt 140 ||||||||| ||||||| Sbjct: 758 aaataaggagatttttt 774 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%), Gaps = 5/88 (5%) Strand = Plus / Plus Query: 176 tagataaatatccacacacatctggatatattctagatcttcttttttgactatatatta 235 |||||||||| ||||||||||| ||||||||||||||||||||| ||||||| || Sbjct: 804 tagataaatagacacacacatctagatatattctagatcttctttcttgacta-----ta 858 Query: 236 tatttttctgttttaacaaattcaatat 263 ||||||||| ||||||||||||| |||| Sbjct: 859 tatttttctattttaacaaattccatat 886
>gb|AF133482.1|AF133482 Chasmanthium laxum ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1195 Score = 357 bits (180), Expect = 3e-95 Identities = 241/260 (92%), Gaps = 6/260 (2%) Strand = Plus / Plus Query: 321 ccgtaatatttttaaatattatggaattagagaaatttatttacatgctttctcattcca 380 ||||||||||||| ||||||||||||||||||||||| || ||||||||||| || Sbjct: 921 ccgtaatatttttgaatattatggaattagagaaattcg----cacgctttctcatttca 976 Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 977 tttgcgaggagctggatgagaagaaactctcatgtccagttttgcagtagagatggaact 1036 Query: 441 aagaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagagg 500 |||||||| ||| |||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 1037 aagaaaga--accgtcgactataaccccaaaagaactagatttcgtaaacaacatagagg 1094 Query: 501 aagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttca 560 ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1095 aagaatgaagggaaaatcctgccgaggcaatcgtatttgttttggtagatatgctcttca 1154 Query: 561 agcacttgaacccgcttgga 580 || ||||||||||||||||| Sbjct: 1155 agtacttgaacccgcttgga 1174 Score = 93.7 bits (47), Expect = 6e-16 Identities = 107/123 (86%), Gaps = 8/123 (6%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||| |||||||||||| ||||||||||||||||||| ||||| |||| ||||| Sbjct: 646 aaaaaattgttttatttggtaaggttataaattaacaaataag-acagg-aaag-agtaa 702 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| |||||| |||||| ||||||||||||||||| ||| Sbjct: 703 atattcgcccgcgaaatctttattggcttagaa-----caccgcgattcaataagaataa 757 Query: 124 aaa 126 ||| Sbjct: 758 aaa 760 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 198 tggatatattctagatcttcttttttgactat 229 ||||||||||||||||||||||| |||||||| Sbjct: 816 tggatatattctagatcttctttcttgactat 847
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 355 bits (179), Expect = 1e-94 Identities = 275/302 (91%), Gaps = 9/302 (2%) Strand = Plus / Minus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 |||||||||||||||||| |||| ||| ||||||||| || |||||||||| ||||| Sbjct: 80099 cctaactttttctattatatattgatgtgtatctatc--ta---taatatttttgaatat 80045 Query: 340 tatggaattagagaaattt-atttacatgctttctcattccattcgcgaggagctggatg 398 ||||||||||||||||| ||| || |||| |||||| |||||||||||||||||||| Sbjct: 80044 tatggaattagagaaatgacattcgcacgctt-ctcatttcattcgcgaggagctggatg 79986 Query: 399 agaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcga 458 |||||||||||||||||||||||||| |||||||||||||||||||| || |||||||| Sbjct: 79985 agaagaaactctcatgtccagttttgtagtagagatggaactaagaagga--accatcga 79928 Query: 459 ctataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatc 518 |||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||| Sbjct: 79927 ctataaccccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatc 79868 Query: 519 cttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttg 578 || ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 79867 ctgccgaggcaatcatatttgttttggtagatatgctcttcaagtacttgaacccgcttg 79808 Query: 579 ga 580 || Sbjct: 79807 ga 79806 Score = 123 bits (62), Expect = 7e-25 Identities = 113/126 (89%), Gaps = 3/126 (2%) Strand = Plus / Minus Query: 1 accaaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnag 60 |||| ||||||| ||||||| |||| || |||||||||||||||| ||||| |||| || Sbjct: 80353 accacaaaattgctttatttgataaggttctaaattaacaaataag-acagg-aaag-ag 80297 Query: 61 taaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagag 120 |||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||| Sbjct: 80296 taaatattcgcccgcgaaatccttattggattagaatactttaccacgattcaataagaa 80237 Query: 121 taaaaa 126 |||||| Sbjct: 80236 taaaaa 80231 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 198 tggatatattctagatcttcttttttgactatatattatatttttctgttttaa 251 ||||||||||||||||||||||| ||||||||||||| |||||||| |||||| Sbjct: 80179 tggatatattctagatcttctttcttgactatatatttaatttttcttttttaa 80126
>gb|M15176.1|MZECPPG Zea mays chloroplast Eco x DNA Length = 1368 Score = 355 bits (179), Expect = 1e-94 Identities = 275/302 (91%), Gaps = 9/302 (2%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 |||||||||||||||||| |||| ||| ||||||||| || |||||||||| ||||| Sbjct: 478 cctaactttttctattatatattgatgtgtatctatc--ta---taatatttttgaatat 532 Query: 340 tatggaattagagaaattt-atttacatgctttctcattccattcgcgaggagctggatg 398 ||||||||||||||||| ||| || |||| |||||| |||||||||||||||||||| Sbjct: 533 tatggaattagagaaatgacattcgcacgctt-ctcatttcattcgcgaggagctggatg 591 Query: 399 agaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcga 458 |||||||||||||||||||||||||| |||||||||||||||||||| || |||||||| Sbjct: 592 agaagaaactctcatgtccagttttgtagtagagatggaactaagaagga--accatcga 649 Query: 459 ctataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatc 518 |||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||| Sbjct: 650 ctataaccccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatc 709 Query: 519 cttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttg 578 || ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 710 ctgccgaggcaatcatatttgttttggtagatatgctcttcaagtacttgaacccgcttg 769 Query: 579 ga 580 || Sbjct: 770 ga 771 Score = 123 bits (62), Expect = 7e-25 Identities = 113/126 (89%), Gaps = 3/126 (2%) Strand = Plus / Plus Query: 1 accaaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnag 60 |||| ||||||| ||||||| |||| || |||||||||||||||| ||||| |||| || Sbjct: 224 accacaaaattgctttatttgataaggttctaaattaacaaataag-acagg-aaag-ag 280 Query: 61 taaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagag 120 |||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||| Sbjct: 281 taaatattcgcccgcgaaatccttattggattagaatactttaccacgattcaataagaa 340 Query: 121 taaaaa 126 |||||| Sbjct: 341 taaaaa 346 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 198 tggatatattctagatcttcttttttgactatatattatatttttctgttttaa 251 ||||||||||||||||||||||| ||||||||||||| |||||||| |||||| Sbjct: 398 tggatatattctagatcttctttcttgactatatatttaatttttcttttttaa 451
>gb|AY847114.1| Spartochloa scirpoidea ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1176 Score = 351 bits (177), Expect = 2e-93 Identities = 270/300 (90%), Gaps = 11/300 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 |||||||||||||||||| |||| ||| ||||||||||||| |||||||| ||||| Sbjct: 866 cctaactttttctattatatattgatgtgtatctatccgta-----atatttttgaatat 920 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 || ||||||||||||||| |||||||| ||||| |||||| |||||||||||||| Sbjct: 921 tacggaattagagaaattgg----catgctttatcatttcattcgtgaggagctggatga 976 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 977 gaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgac 1034 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 |||| |||||||||||| |||||||| || |||||||||||||||||||| ||||||||| Sbjct: 1035 tatatccccaaaagaactagatttcgtaaccaacatagaggaagaatgaagggaaaatcc 1094 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1095 tgccgaggcaatcgtatgtgttttggtagatatgctcttcaagtacttgaacccgcttgg 1154 Score = 123 bits (62), Expect = 7e-25 Identities = 116/129 (89%), Gaps = 5/129 (3%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| |||||||||||| ||||||||||||||||||| ||||| |||| ||||| Sbjct: 631 aaaaaattgctttatttggtaaggttataaattaacaaataag-acagg-aaag-agtaa 687 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||| ||||||| ||||||||||||| | ||||||||||||| ||| Sbjct: 688 atattcgcccgcgaaacccttattggattagaatacttt--cacgattcaataagaataa 745 Query: 124 aaataagga 132 ||||||||| Sbjct: 746 aaataagga 754 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 198 tggatatattctagatcttcttttttgactat 229 ||||||||||||||||||||||| |||||||| Sbjct: 796 tggatatattctagatcttctttcttgactat 827
>gb|AY912195.1| Chusquea culeou ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1181 Score = 351 bits (177), Expect = 2e-93 Identities = 271/300 (90%), Gaps = 12/300 (4%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||||||||||||||| | |||||||| || ||||||| ||||| Sbjct: 858 cctaactttttctattatctattaatgtgcatctatccata-----atattttggaatat 912 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 |||||||||||| |||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 913 tatggaattagataaatttg----cacgctttctcatttcattcgcgaggagctggatga 968 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| | Sbjct: 969 gaagaaactctcatgtccagttttgcagtagagatggaactaagaa--agaaccatcgcc 1026 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 |||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||| Sbjct: 1027 tataaccccaaaagaaccagatttcgtaaacaacatagaggaagaatg-aagggaaatcc 1085 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | || ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1086 tgcctaggcaatagtatttgttttggtagatatgctcttcaagcacttgagcccgcttgg 1145 Score = 127 bits (64), Expect = 4e-26 Identities = 137/160 (85%), Gaps = 11/160 (6%) Strand = Plus / Plus Query: 108 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 163 ||||||||||||||||||||||||||||||||| |||| || |||||||| |||| Sbjct: 697 gattcaataagagtaaaaataaggatatttttttttaagaaagattacattat---ctat 753 Query: 164 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 223 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 754 aaatatataatacggataaatagacacacacatctagatatattctagatcttctttctt 813 Query: 224 gactatatattatatttttctgttttaacaaattcaatat 263 |||||||||| ||||||| |||||||||||| ||||| Sbjct: 814 gactatatat----tttttctattttaacaaattaaatat 849 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/82 (86%), Gaps = 8/82 (9%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtt-----tataaattaacaaataagnacaggnaaagn 58 ||||||||| ||||||||||||| | |||||||||||||||||| ||||| |||| Sbjct: 614 aaaaaattgccttatttggtaaggttataatataaattaacaaataag-acagg-aaag- 670 Query: 59 agtaaatattcgcccgcgaaat 80 |||||| ||||||||||||||| Sbjct: 671 agtaaacattcgcccgcgaaat 692
>gb|AY847079.1| Merxmuellera rangei ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1166 Score = 349 bits (176), Expect = 6e-93 Identities = 240/260 (92%), Gaps = 6/260 (2%) Strand = Plus / Plus Query: 321 ccgtaatatttttaaatattatggaattagagaaatttatttacatgctttctcattcca 380 |||||||||||| ||||||||||||||| |||||||| || ||||||||||| || Sbjct: 892 ccgtaatattttggaatattatggaattaaagaaatttg----cacgctttctcatttca 947 Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 948 ttcgtgaggagctggatgagaagaaactctcatgtccagttttgcagtagagatggaact 1007 Query: 441 aagaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagagg 500 |||||||| |||||||||||||||||||||||||| |||||||| |||||||| ||||| Sbjct: 1008 aagaaaga--accatcgactataaccccaaaagaactagatttcgtaaacaacacagagg 1065 Query: 501 aagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttca 560 ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1066 aagaatgaagggaaaatcctgccgaggcaatcgtatttgttttggtagatatgctcttca 1125 Query: 561 agcacttgaacccgcttgga 580 || ||||||||||||||||| Sbjct: 1126 agtacttgaacccgcttgga 1145 Score = 111 bits (56), Expect = 3e-21 Identities = 105/116 (90%), Gaps = 4/116 (3%) Strand = Plus / Plus Query: 15 ttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaaatattcgcccg 74 |||||||||||| || ||||||| |||||||| ||||| |||| |||||||||||||||| Sbjct: 625 ttatttggtaagattctaaattaccaaataag-acagg-aaag-agtaaatattcgcccg 681 Query: 75 cgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataag 130 |||| | ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 682 cgaatct-ttattgaattagaatactttaccatgattcaataagagtaaaaataag 736 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 201 atatattctagatcttcttttttgactatatatt 234 |||||||||||||||||||| || |||||||||| Sbjct: 788 atatattctagatcttctttctttactatatatt 821
>ref|XM_479424.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2154 Score = 349 bits (176), Expect = 6e-93 Identities = 257/283 (90%), Gaps = 11/283 (3%) Strand = Plus / Plus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| |||||||| |||||||||||| |||||| ||||||||||||| Sbjct: 423 ctattaatgtgtatctat-----ccgtaatattttagaatattgtggaattagagaa--- 474 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 475 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 533 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 534 agttttgcagtagagatggaactaag--agagaaccatcgactataaccccaaaagaacc 591 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||| Sbjct: 592 agatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccgaggcaattgtatt 651 Query: 538 tgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 652 tgttttggtagatatgctcttcaagcacttgaacccacttgga 694 Score = 163 bits (82), Expect = 8e-37 Identities = 115/122 (94%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||||| |||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 158 aaaaaattgtcttatttgataaggttatgaattaacaaataag-acagg-aaag-agtaa 214 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 215 atattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataagagtaa 274 Query: 124 aa 125 || Sbjct: 275 aa 276 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 309 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 368 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 369 tgactatatatt 380
>ref|XM_479423.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2154 Score = 349 bits (176), Expect = 6e-93 Identities = 257/283 (90%), Gaps = 11/283 (3%) Strand = Plus / Plus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| |||||||| |||||||||||| |||||| ||||||||||||| Sbjct: 423 ctattaatgtgtatctat-----ccgtaatattttagaatattgtggaattagagaa--- 474 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 475 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 533 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 534 agttttgcagtagagatggaactaag--agagaaccatcgactataaccccaaaagaacc 591 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||| Sbjct: 592 agatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccgaggcaattgtatt 651 Query: 538 tgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 652 tgttttggtagatatgctcttcaagcacttgaacccacttgga 694 Score = 163 bits (82), Expect = 8e-37 Identities = 115/122 (94%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||||| |||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 158 aaaaaattgtcttatttgataaggttatgaattaacaaataag-acagg-aaag-agtaa 214 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 215 atattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataagagtaa 274 Query: 124 aa 125 || Sbjct: 275 aa 276 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 309 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 368 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 369 tgactatatatt 380
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 349 bits (176), Expect = 6e-93 Identities = 257/283 (90%), Gaps = 11/283 (3%) Strand = Plus / Minus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| |||||||| |||||||||||| |||||| ||||||||||||| Sbjct: 78300 ctattaatgtgtatctat-----ccgtaatattttagaatattgtggaattagagaa--- 78249 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 78248 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 78190 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 78189 agttttgcagtagagatggaactaag--agagaaccatcgactataaccccaaaagaacc 78132 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||| Sbjct: 78131 agatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccgaggcaattgtatt 78072 Query: 538 tgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 78071 tgttttggtagatatgctcttcaagcacttgaacccacttgga 78029 Score = 163 bits (82), Expect = 8e-37 Identities = 115/122 (94%), Gaps = 3/122 (2%) Strand = Plus / Minus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||||| |||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 78574 aaaaaattgtcttatttgataaggttatgaattaacaaataag-acagg-aaag-agtaa 78518 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 78517 atattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataagagtaa 78458 Query: 124 aa 125 || Sbjct: 78457 aa 78456 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 78414 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 78355 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 78354 tgactatatatt 78343
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 349 bits (176), Expect = 6e-93 Identities = 257/283 (90%), Gaps = 11/283 (3%) Strand = Plus / Minus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| |||||||| |||||||||||| |||||| ||||||||||||| Sbjct: 78300 ctattaatgtgtatctat-----ccgtaatattttagaatattgtggaattagagaa--- 78249 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 78248 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 78190 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 78189 agttttgcagtagagatggaactaag--agagaaccatcgactataaccccaaaagaacc 78132 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||| Sbjct: 78131 agatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccgaggcaattgtatt 78072 Query: 538 tgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 78071 tgttttggtagatatgctcttcaagcacttgaacccacttgga 78029 Score = 163 bits (82), Expect = 8e-37 Identities = 115/122 (94%), Gaps = 3/122 (2%) Strand = Plus / Minus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||||| |||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 78574 aaaaaattgtcttatttgataaggttatgaattaacaaataag-acagg-aaag-agtaa 78518 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 78517 atattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataagagtaa 78458 Query: 124 aa 125 || Sbjct: 78457 aa 78456 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 78414 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 78355 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 78354 tgactatatatt 78343
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 349 bits (176), Expect = 6e-93 Identities = 257/283 (90%), Gaps = 11/283 (3%) Strand = Plus / Minus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| |||||||| |||||||||||| |||||| ||||||||||||| Sbjct: 78244 ctattaatgtgtatctat-----ccgtaatattttagaatattgtggaattagagaa--- 78193 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 78192 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 78134 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 78133 agttttgcagtagagatggaactaag--agagaaccatcgactataaccccaaaagaacc 78076 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||| Sbjct: 78075 agatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccgaggcaattgtatt 78016 Query: 538 tgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 78015 tgttttggtagatatgctcttcaagcacttgaacccacttgga 77973 Score = 163 bits (82), Expect = 8e-37 Identities = 115/122 (94%), Gaps = 3/122 (2%) Strand = Plus / Minus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||||| |||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 78517 aaaaaattgtcttatttgataaggttatgaattaacaaataag-acagg-aaag-agtaa 78461 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 78460 atattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataagagtaa 78401 Query: 124 aa 125 || Sbjct: 78400 aa 78399 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 78358 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 78299 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 78298 tgactatatatt 78287
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 349 bits (176), Expect = 6e-93 Identities = 257/283 (90%), Gaps = 11/283 (3%) Strand = Plus / Minus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| |||||||| |||||||||||| |||||| ||||||||||||| Sbjct: 54311 ctattaatgtgtatctat-----ccgtaatattttagaatattgtggaattagagaa--- 54260 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 54259 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 54201 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 54200 agttttgcagtagagatggaactaag--agagaaccatcgactataaccccaaaagaacc 54143 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||| Sbjct: 54142 agatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccgaggcaattgtatt 54083 Query: 538 tgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 54082 tgttttggtagatatgctcttcaagcacttgaacccacttgga 54040 Score = 163 bits (82), Expect = 8e-37 Identities = 115/122 (94%), Gaps = 3/122 (2%) Strand = Plus / Minus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||||| |||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 54580 aaaaaattgtcttatttgataaggttatgaattaacaaataag-acagg-aaag-agtaa 54524 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 54523 atattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataagagtaa 54464 Query: 124 aa 125 || Sbjct: 54463 aa 54462 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 54425 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 54366 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 54365 tgactatatatt 54354
>gb|AC134345.2| Oryza sativa (jpaonica cultivar-group) chromosome 5 PAC clone P0012A07, complete sequence Length = 136858 Score = 349 bits (176), Expect = 6e-93 Identities = 257/283 (90%), Gaps = 11/283 (3%) Strand = Plus / Minus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| |||||||| |||||||||||| |||||| ||||||||||||| Sbjct: 127139 ctattaatgtgtatctat-----ccgtaatattttagaatattgtggaattagagaa--- 127088 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 127087 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 127029 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 127028 agttttgcagtagagatggaactaag--agagaaccatcgactataaccccaaaagaacc 126971 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||| Sbjct: 126970 agatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccgaggcaattgtatt 126911 Query: 538 tgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 126910 tgttttggtagatatgctcttcaagcacttgaacccacttgga 126868 Score = 163 bits (82), Expect = 8e-37 Identities = 115/122 (94%), Gaps = 3/122 (2%) Strand = Plus / Minus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||||| |||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 127408 aaaaaattgtcttatttgataaggttatgaattaacaaataag-acagg-aaag-agtaa 127352 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 127351 atattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataagagtaa 127292 Query: 124 aa 125 || Sbjct: 127291 aa 127290 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 127253 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 127194 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 127193 tgactatatatt 127182
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 349 bits (176), Expect = 6e-93 Identities = 257/283 (90%), Gaps = 11/283 (3%) Strand = Plus / Plus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| ||||||||||| ||||||||| |||||| ||||||||||||| Sbjct: 72452 ctattaatgtgtatctatccg-----taatattttagaatattgtggaattagagaa--- 72503 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 72504 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 72562 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 72563 agttttgcagtagagatggaactaag--agagaaccatcgactataaccccaaaagaacc 72620 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||| Sbjct: 72621 agatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccgaggcaattgtatt 72680 Query: 538 tgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 72681 tgttttggtagatatgctcttcaagcacttgaacccacttgga 72723 Score = 163 bits (82), Expect = 8e-37 Identities = 115/122 (94%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||||| |||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 72180 aaaaaattgtcttatttgataaggttatgaattaacaaataag-acagg-aaag-agtaa 72236 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 72237 atattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataagagtaa 72296 Query: 124 aa 125 || Sbjct: 72297 aa 72298 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 72338 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 72397 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 72398 tgactatatatt 72409
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 349 bits (176), Expect = 6e-93 Identities = 257/283 (90%), Gaps = 11/283 (3%) Strand = Plus / Minus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| |||||||| |||||||||||| |||||| ||||||||||||| Sbjct: 76489 ctattaatgtgtatctat-----ccgtaatattttagaatattgtggaattagagaa--- 76438 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 76437 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 76379 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 76378 agttttgcagtagagatggaactaag--agagaaccatcgactataaccccaaaagaacc 76321 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||| Sbjct: 76320 agatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccgaggcaattgtatt 76261 Query: 538 tgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 76260 tgttttggtagatatgctcttcaagcacttgaacccacttgga 76218 Score = 163 bits (82), Expect = 8e-37 Identities = 115/122 (94%), Gaps = 3/122 (2%) Strand = Plus / Minus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||||| |||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 76756 aaaaaattgtcttatttgataaggttatgaattaacaaataag-acagg-aaag-agtaa 76700 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 76699 atattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataagagtaa 76640 Query: 124 aa 125 || Sbjct: 76639 aa 76638 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 76603 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 76544 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 76543 tgactatatatt 76532
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 349 bits (176), Expect = 6e-93 Identities = 257/283 (90%), Gaps = 11/283 (3%) Strand = Plus / Minus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| |||||||| |||||||||||| |||||| ||||||||||||| Sbjct: 10553 ctattaatgtgtatctat-----ccgtaatattttagaatattgtggaattagagaa--- 10502 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10501 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 10443 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10442 agttttgcagtagagatggaactaag--agagaaccatcgactataaccccaaaagaacc 10385 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||| Sbjct: 10384 agatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccgaggcaattgtatt 10325 Query: 538 tgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 10324 tgttttggtagatatgctcttcaagcacttgaacccacttgga 10282 Score = 163 bits (82), Expect = 8e-37 Identities = 115/122 (94%), Gaps = 3/122 (2%) Strand = Plus / Minus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||||| |||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 10820 aaaaaattgtcttatttgataaggttatgaattaacaaataag-acagg-aaag-agtaa 10764 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 10763 atattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataagagtaa 10704 Query: 124 aa 125 || Sbjct: 10703 aa 10702 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 10667 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 10608 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 10607 tgactatatatt 10596
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 349 bits (176), Expect = 6e-93 Identities = 257/283 (90%), Gaps = 11/283 (3%) Strand = Plus / Plus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| |||||||| |||||||||||| |||||| ||||||||||||| Sbjct: 9191379 ctattaatgtgtatctat-----ccgtaatattttagaatattgtggaattagagaa--- 9191430 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9191431 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 9191489 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9191490 agttttgcagtagagatggaactaag--agagaaccatcgactataaccccaaaagaacc 9191547 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||| Sbjct: 9191548 agatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccgaggcaattgtatt 9191607 Query: 538 tgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 9191608 tgttttggtagatatgctcttcaagcacttgaacccacttgga 9191650 Score = 349 bits (176), Expect = 6e-93 Identities = 257/283 (90%), Gaps = 11/283 (3%) Strand = Plus / Plus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| ||||||||| ||||||||||| |||||| ||||||||||||| Sbjct: 9114426 ctattaatgtgtatctatc-----cgtaatattttagaatattgtggaattagagaa--- 9114477 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9114478 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 9114536 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9114537 agttttgcagtagagatggaactaag--agagaaccatcgactataaccccaaaagaacc 9114594 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||| Sbjct: 9114595 agatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccgaggcaattgtatt 9114654 Query: 538 tgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 9114655 tgttttggtagatatgctcttcaagcacttgaacccacttgga 9114697 Score = 163 bits (82), Expect = 8e-37 Identities = 115/122 (94%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||||| |||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 9191107 aaaaaattgtcttatttgataaggttatgaattaacaaataag-acagg-aaag-agtaa 9191163 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9191164 atattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataagagtaa 9191223 Query: 124 aa 125 || Sbjct: 9191224 aa 9191225 Score = 163 bits (82), Expect = 8e-37 Identities = 115/122 (94%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||||| |||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 9114154 aaaaaattgtcttatttgataaggttatgaattaacaaataag-acagg-aaag-agtaa 9114210 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9114211 atattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataagagtaa 9114270 Query: 124 aa 125 || Sbjct: 9114271 aa 9114272 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 9191265 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 9191324 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 9191325 tgactatatatt 9191336 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 9114312 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 9114371 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 9114372 tgactatatatt 9114383
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 349 bits (176), Expect = 6e-93 Identities = 257/283 (90%), Gaps = 11/283 (3%) Strand = Plus / Minus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| |||||||| |||||||||||| |||||| ||||||||||||| Sbjct: 10370097 ctattaatgtgtatctat-----ccgtaatattttagaatattgtggaattagagaa--- 10370046 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10370045 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 10369987 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10369986 agttttgcagtagagatggaactaag--agagaaccatcgactataaccccaaaagaacc 10369929 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||| Sbjct: 10369928 agatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccgaggcaattgtatt 10369869 Query: 538 tgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 10369868 tgttttggtagatatgctcttcaagcacttgaacccacttgga 10369826 Score = 163 bits (82), Expect = 8e-37 Identities = 115/122 (94%), Gaps = 3/122 (2%) Strand = Plus / Minus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||||| |||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 10370364 aaaaaattgtcttatttgataaggttatgaattaacaaataag-acagg-aaag-agtaa 10370308 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 10370307 atattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataagagtaa 10370248 Query: 124 aa 125 || Sbjct: 10370247 aa 10370246 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 10370211 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 10370152 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 10370151 tgactatatatt 10370140
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 349 bits (176), Expect = 6e-93 Identities = 257/283 (90%), Gaps = 11/283 (3%) Strand = Plus / Plus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| |||||||||| |||||||||| |||||| ||||||||||||| Sbjct: 14455393 ctattaatgtgtatctatcc-----gtaatattttagaatattgtggaattagagaa--- 14455444 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 14455445 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 14455503 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 14455504 agttttgcagtagagatggaactaag--agagaaccatcgactataaccccaaaagaacc 14455561 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||| Sbjct: 14455562 agatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccgaggcaattgtatt 14455621 Query: 538 tgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 14455622 tgttttggtagatatgctcttcaagcacttgaacccacttgga 14455664 Score = 341 bits (172), Expect = 2e-90 Identities = 256/283 (90%), Gaps = 11/283 (3%) Strand = Plus / Plus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| ||||||||| ||||||||||| |||||| ||||||||||||| Sbjct: 11895582 ctattaatgtgtatctatc-----cgtaatattttagaatattgtggaattagagaa--- 11895633 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 11895634 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 11895692 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 11895693 agttttgcagtagagatggaactaag--agagaaccattgactataaccccaaaagaacc 11895750 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||| Sbjct: 11895751 agatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccgaggcaattgtatt 11895810 Query: 538 tgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 11895811 tgttttggtagatatgctcttcaagcacttgaacccacttgga 11895853 Score = 163 bits (82), Expect = 8e-37 Identities = 115/122 (94%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||||| |||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 14455125 aaaaaattgtcttatttgataaggttatgaattaacaaataag-acagg-aaag-agtaa 14455181 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 14455182 atattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataagagtaa 14455241 Query: 124 aa 125 || Sbjct: 14455242 aa 14455243 Score = 125 bits (63), Expect = 2e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataag 118 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 11895369 agtaaatattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataag 11895428 Query: 119 agtaaaa 125 ||||||| Sbjct: 11895429 agtaaaa 11895435 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 14455279 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 14455338 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 14455339 tgactatatatt 14455350 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 11895468 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 11895527 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 11895528 tgactatatatt 11895539
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 349 bits (176), Expect = 6e-93 Identities = 257/283 (90%), Gaps = 11/283 (3%) Strand = Plus / Minus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| |||||||| |||||||||||| |||||| ||||||||||||| Sbjct: 27923783 ctattaatgtgtatctat-----ccgtaatattttagaatattgtggaattagagaa--- 27923732 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 27923731 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 27923673 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 27923672 agttttgcagtagagatggaactaag--agagaaccatcgactataaccccaaaagaacc 27923615 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||| Sbjct: 27923614 agatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccgaggcaattgtatt 27923555 Query: 538 tgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 27923554 tgttttggtagatatgctcttcaagcacttgaacccacttgga 27923512 Score = 163 bits (82), Expect = 8e-37 Identities = 115/122 (94%), Gaps = 3/122 (2%) Strand = Plus / Minus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||||| |||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 27924048 aaaaaattgtcttatttgataaggttatgaattaacaaataag-acagg-aaag-agtaa 27923992 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 27923991 atattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataagagtaa 27923932 Query: 124 aa 125 || Sbjct: 27923931 aa 27923930 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 27923897 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 27923838 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 27923837 tgactatatatt 27923826
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 349 bits (176), Expect = 6e-93 Identities = 257/283 (90%), Gaps = 11/283 (3%) Strand = Plus / Minus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| |||||||| |||||||||||| |||||| ||||||||||||| Sbjct: 12756852 ctattaatgtgtatctat-----ccgtaatattttagaatattgtggaattagagaa--- 12756801 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 12756800 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 12756742 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 12756741 agttttgcagtagagatggaactaag--agagaaccatcgactataaccccaaaagaacc 12756684 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||| Sbjct: 12756683 agatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccgaggcaattgtatt 12756624 Query: 538 tgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 12756623 tgttttggtagatatgctcttcaagcacttgaacccacttgga 12756581 Score = 333 bits (168), Expect = 4e-88 Identities = 249/275 (90%), Gaps = 11/275 (4%) Strand = Plus / Plus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| |||||||||| |||||||||| |||||| ||||||||||||| Sbjct: 19544729 ctattaatgtgtatctatcc-----gtaatattttagaatattgtggaattagagaa--- 19544780 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19544781 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 19544839 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19544840 agttttgcagtagagatggaactaag--agagaaccatcgactataaccccaaaagaacc 19544897 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| |||||||||||||||||||| || |||||||||| |||||||||| ||||| Sbjct: 19544898 agatttcgtaaacaacatagaggaagaataaagggaaaatcctaccgaggcaattgtatt 19544957 Query: 538 tgttttggtagatatgctcttcaagcacttgaacc 572 ||||||||||||||||||||||||||||||||||| Sbjct: 19544958 tgttttggtagatatgctcttcaagcacttgaacc 19544992 Score = 163 bits (82), Expect = 8e-37 Identities = 115/122 (94%), Gaps = 3/122 (2%) Strand = Plus / Minus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||||| |||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 12757121 aaaaaattgtcttatttgataaggttatgaattaacaaataag-acagg-aaag-agtaa 12757065 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 12757064 atattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataagagtaa 12757005 Query: 124 aa 125 || Sbjct: 12757004 aa 12757003 Score = 155 bits (78), Expect = 2e-34 Identities = 114/122 (93%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||||| |||| |||| |||||||||||||| ||| | |||| ||||| Sbjct: 19544463 aaaaaattgtcttatttgataaggttatgaattaacaaataag-acatg-aaag-agtaa 19544519 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 19544520 atattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataagagtaa 19544579 Query: 124 aa 125 || Sbjct: 19544580 aa 19544581 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 12756966 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 12756907 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 12756906 tgactatatatt 12756895 Score = 81.8 bits (41), Expect = 2e-12 Identities = 66/73 (90%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttctttt- 221 |||||||||||| |||||||||| || |||||||| ||||||||||||||| |||||| Sbjct: 19544614 taaatatagaatatagataaataaacatacacatctagatatattctagatcctcttttc 19544673 Query: 222 ttgactatatatt 234 ||||||||||||| Sbjct: 19544674 ttgactatatatt 19544686
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 349 bits (176), Expect = 6e-93 Identities = 257/283 (90%), Gaps = 11/283 (3%) Strand = Plus / Minus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| |||||||| |||||||||||| |||||| ||||||||||||| Sbjct: 33498066 ctattaatgtgtatctat-----ccgtaatattttagaatattgtggaattagagaa--- 33498015 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 33498014 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 33497956 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 33497955 agttttgcagtagagatggaactaag--agagaaccatcgactataaccccaaaagaacc 33497898 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||| Sbjct: 33497897 agatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccgaggcaattgtatt 33497838 Query: 538 tgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 33497837 tgttttggtagatatgctcttcaagcacttgaacccacttgga 33497795 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 195 atctggatatattctagatcttcttttttgactatatatt 234 |||| ||||||||||||||| ||||| ||||||||||||| Sbjct: 33498148 atctagatatattctagatcctctttcttgactatatatt 33498109 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 551 atgctcttcaagcacttgaa 570 |||||||||||||||||||| Sbjct: 36440985 atgctcttcaagcacttgaa 36441004
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 349 bits (176), Expect = 6e-93 Identities = 257/283 (90%), Gaps = 11/283 (3%) Strand = Plus / Minus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| |||||||| |||||||||||| |||||| ||||||||||||| Sbjct: 43263 ctattaatgtgtatctat-----ccgtaatattttagaatattgtggaattagagaa--- 43212 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 43211 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 43153 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 43152 agttttgcagtagagatggaactaag--agagaaccatcgactataaccccaaaagaacc 43095 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||| Sbjct: 43094 agatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccgaggcaattgtatt 43035 Query: 538 tgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 43034 tgttttggtagatatgctcttcaagcacttgaacccacttgga 42992 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 195 atctggatatattctagatcttcttttttgactatatatt 234 |||| ||||||||||||||| ||||| ||||||||||||| Sbjct: 43345 atctagatatattctagatcctctttcttgactatatatt 43306
>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E03 Length = 159980 Score = 349 bits (176), Expect = 6e-93 Identities = 257/283 (90%), Gaps = 11/283 (3%) Strand = Plus / Minus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| |||||||| |||||||||||| |||||| ||||||||||||| Sbjct: 87141 ctattaatgtgtatctat-----ccgtaatattttagaatattgtggaattagagaa--- 87090 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 87089 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 87031 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 87030 agttttgcagtagagatggaactaag--agagaaccatcgactataaccccaaaagaacc 86973 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||| Sbjct: 86972 agatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccgaggcaattgtatt 86913 Query: 538 tgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 86912 tgttttggtagatatgctcttcaagcacttgaacccacttgga 86870 Score = 163 bits (82), Expect = 8e-37 Identities = 115/122 (94%), Gaps = 3/122 (2%) Strand = Plus / Minus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||||| |||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 87406 aaaaaattgtcttatttgataaggttatgaattaacaaataag-acagg-aaag-agtaa 87350 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 87349 atattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataagagtaa 87290 Query: 124 aa 125 || Sbjct: 87289 aa 87288 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 87255 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 87196 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 87195 tgactatatatt 87184
>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1343_D04 Length = 143407 Score = 349 bits (176), Expect = 6e-93 Identities = 257/283 (90%), Gaps = 11/283 (3%) Strand = Plus / Minus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| |||||||| |||||||||||| |||||| ||||||||||||| Sbjct: 13117 ctattaatgtgtatctat-----ccgtaatattttagaatattgtggaattagagaa--- 13066 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 13065 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 13007 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 13006 agttttgcagtagagatggaactaag--agagaaccatcgactataaccccaaaagaacc 12949 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||| Sbjct: 12948 agatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccgaggcaattgtatt 12889 Query: 538 tgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 12888 tgttttggtagatatgctcttcaagcacttgaacccacttgga 12846 Score = 163 bits (82), Expect = 8e-37 Identities = 115/122 (94%), Gaps = 3/122 (2%) Strand = Plus / Minus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||||| |||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 13382 aaaaaattgtcttatttgataaggttatgaattaacaaataag-acagg-aaag-agtaa 13326 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 13325 atattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataagagtaa 13266 Query: 124 aa 125 || Sbjct: 13265 aa 13264 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 13231 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 13172 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 13171 tgactatatatt 13160
>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0465E03 Length = 151206 Score = 349 bits (176), Expect = 6e-93 Identities = 257/283 (90%), Gaps = 11/283 (3%) Strand = Plus / Plus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| ||||||||||| ||||||||| |||||| ||||||||||||| Sbjct: 147196 ctattaatgtgtatctatccg-----taatattttagaatattgtggaattagagaa--- 147247 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 147248 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 147306 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 147307 agttttgcagtagagatggaactaag--agagaaccatcgactataaccccaaaagaacc 147364 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||| Sbjct: 147365 agatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccgaggcaattgtatt 147424 Query: 538 tgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 147425 tgttttggtagatatgctcttcaagcacttgaacccacttgga 147467 Score = 163 bits (82), Expect = 8e-37 Identities = 115/122 (94%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||||| |||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 146928 aaaaaattgtcttatttgataaggttatgaattaacaaataag-acagg-aaag-agtaa 146984 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 146985 atattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataagagtaa 147044 Query: 124 aa 125 || Sbjct: 147045 aa 147046 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 147082 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 147141 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 147142 tgactatatatt 147153
>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1585_D02 Length = 103172 Score = 349 bits (176), Expect = 6e-93 Identities = 257/283 (90%), Gaps = 11/283 (3%) Strand = Plus / Plus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| ||||||||| ||||||||||| |||||| ||||||||||||| Sbjct: 54958 ctattaatgtgtatctatc-----cgtaatattttagaatattgtggaattagagaa--- 55009 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 55010 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 55068 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 55069 agttttgcagtagagatggaactaag--agagaaccatcgactataaccccaaaagaacc 55126 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||| Sbjct: 55127 agatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccgaggcaattgtatt 55186 Query: 538 tgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 55187 tgttttggtagatatgctcttcaagcacttgaacccacttgga 55229 Score = 163 bits (82), Expect = 8e-37 Identities = 115/122 (94%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||||| |||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 54690 aaaaaattgtcttatttgataaggttatgaattaacaaataag-acagg-aaag-agtaa 54746 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 54747 atattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataagagtaa 54806 Query: 124 aa 125 || Sbjct: 54807 aa 54808 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 54844 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 54903 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 54904 tgactatatatt 54915
>dbj|AK105308.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-B12, full insert sequence Length = 2166 Score = 349 bits (176), Expect = 6e-93 Identities = 257/283 (90%), Gaps = 11/283 (3%) Strand = Plus / Plus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| |||||||||| |||||||||| |||||| ||||||||||||| Sbjct: 433 ctattaatgtgtatctatcc-----gtaatattttagaatattgtggaattagagaa--- 484 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 485 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 543 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 544 agttttgcagtagagatggaactaag--agagaaccatcgactataaccccaaaagaacc 601 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||| Sbjct: 602 agatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccgaggcaattgtatt 661 Query: 538 tgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 662 tgttttggtagatatgctcttcaagcacttgaacccacttgga 704 Score = 163 bits (82), Expect = 8e-37 Identities = 115/122 (94%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||||| |||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 158 aaaaaattgtcttatttgataaggttatgaattaacaaataag-acagg-aaag-agtaa 214 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 215 atattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataagagtaa 274 Query: 124 aa 125 || Sbjct: 275 aa 276 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 319 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 378 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 379 tgactatatatt 390
>dbj|AK071967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084G06, full insert sequence Length = 1764 Score = 349 bits (176), Expect = 6e-93 Identities = 257/283 (90%), Gaps = 11/283 (3%) Strand = Plus / Plus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| ||||||||||| ||||||||| |||||| ||||||||||||| Sbjct: 648 ctattaatgtgtatctatccg-----taatattttagaatattgtggaattagagaa--- 699 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 700 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 758 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 759 agttttgcagtagagatggaactaag--agagaaccatcgactataaccccaaaagaacc 816 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||| Sbjct: 817 agatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccgaggcaattgtatt 876 Query: 538 tgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 877 tgttttggtagatatgctcttcaagcacttgaacccacttgga 919 Score = 163 bits (82), Expect = 8e-37 Identities = 115/122 (94%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||||| |||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 373 aaaaaattgtcttatttgataaggttatgaattaacaaataag-acagg-aaag-agtaa 429 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 430 atattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataagagtaa 489 Query: 124 aa 125 || Sbjct: 490 aa 491 Score = 79.8 bits (40), Expect = 9e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||| ||| || |||||||| ||||||||||||||| ||||| | Sbjct: 534 taaatatagaatatagatagataaacatacacatctagatatattctagatcctctttct 593 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 594 tgactatatatt 605
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 349 bits (176), Expect = 6e-93 Identities = 257/283 (90%), Gaps = 11/283 (3%) Strand = Plus / Minus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| |||||||| |||||||||||| |||||| ||||||||||||| Sbjct: 10376136 ctattaatgtgtatctat-----ccgtaatattttagaatattgtggaattagagaa--- 10376085 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10376084 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 10376026 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10376025 agttttgcagtagagatggaactaag--agagaaccatcgactataaccccaaaagaacc 10375968 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||| Sbjct: 10375967 agatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccgaggcaattgtatt 10375908 Query: 538 tgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 10375907 tgttttggtagatatgctcttcaagcacttgaacccacttgga 10375865 Score = 163 bits (82), Expect = 8e-37 Identities = 115/122 (94%), Gaps = 3/122 (2%) Strand = Plus / Minus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||||| |||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 10376403 aaaaaattgtcttatttgataaggttatgaattaacaaataag-acagg-aaag-agtaa 10376347 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 10376346 atattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataagagtaa 10376287 Query: 124 aa 125 || Sbjct: 10376286 aa 10376285 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 10376250 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 10376191 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 10376190 tgactatatatt 10376179
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 349 bits (176), Expect = 6e-93 Identities = 257/283 (90%), Gaps = 11/283 (3%) Strand = Plus / Minus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| |||||||| |||||||||||| |||||| ||||||||||||| Sbjct: 78244 ctattaatgtgtatctat-----ccgtaatattttagaatattgtggaattagagaa--- 78193 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 78192 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 78134 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 78133 agttttgcagtagagatggaactaag--agagaaccatcgactataaccccaaaagaacc 78076 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||| Sbjct: 78075 agatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccgaggcaattgtatt 78016 Query: 538 tgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 78015 tgttttggtagatatgctcttcaagcacttgaacccacttgga 77973 Score = 163 bits (82), Expect = 8e-37 Identities = 115/122 (94%), Gaps = 3/122 (2%) Strand = Plus / Minus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||||| |||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 78514 aaaaaattgtcttatttgataaggttatgaattaacaaataag-acagg-aaag-agtaa 78458 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 78457 atattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataagagtaa 78398 Query: 124 aa 125 || Sbjct: 78397 aa 78396 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 78358 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 78299 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 78298 tgactatatatt 78287
>gb|AY847082.1| Andropogon gerardii ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1186 Score = 347 bits (175), Expect = 3e-92 Identities = 239/258 (92%), Gaps = 3/258 (1%) Strand = Plus / Plus Query: 324 taatatttttaaatattatggaattagagaaatttattta-catgctttctcattccatt 382 ||||||||| |||||||||||||||||||||| | || || ||||||||||| |||| Sbjct: 910 taatattttggaatattatggaattagagaaatgaaattcgcacgctttctcatttcatt 969 Query: 383 cgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaactaa 442 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 970 cgcgaggagctggatgagaagaaactctcatgtccagttttgtagtagagatggaactaa 1029 Query: 443 gaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagaggaa 502 |||||| ||| |||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 1030 gaaaga--accgtcgactataaccccaaaagaactagatttcgtaaacaacatagaggaa 1087 Query: 503 gaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttcaag 562 ||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1088 gaatgaagggaaaatcctgccgaggcaatcatatttgttttggtagatatgctcttcaag 1147 Query: 563 cacttgaacccgcttgga 580 ||||||||||||||||| Sbjct: 1148 tacttgaacccgcttgga 1165 Score = 113 bits (57), Expect = 7e-22 Identities = 115/129 (89%), Gaps = 4/129 (3%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| ||||||| |||| || |||||||||||||||| ||||| |||| ||||| Sbjct: 630 aaaaaattgctttatttgataaggttctaaattaacaaataag-acagg-aaag-agtaa 686 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| ||||||| |||||||||||||| | ||||||||||||| ||| Sbjct: 687 atattcgcccgcgaaatccttattggattagaatacttta-cacgattcaataagaataa 745 Query: 124 aaataagga 132 ||| ||||| Sbjct: 746 aaaaaagga 754 Score = 69.9 bits (35), Expect = 9e-09 Identities = 57/63 (90%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 198 tggatatattctagatcttcttttttgactatatattatatttttctgttttaacaaatt 257 ||||||||||||||||||||||| ||||||||||||| | ||||||| |||||| ||| | Sbjct: 798 tggatatattctagatcttctttcttgactatatatt-tctttttcttttttaagaaagt 856 Query: 258 caa 260 ||| Sbjct: 857 caa 859
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 347 bits (175), Expect = 3e-92 Identities = 257/283 (90%), Gaps = 10/283 (3%) Strand = Plus / Minus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| |||||||| |||||||||||| |||||| ||||||||||||||| Sbjct: 78288 ctattaatgtgtatctat-----ccgtaatattttagaatattgtggaattagagaaat- 78235 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 || || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 78234 --ttggcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 78177 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 78176 agttttgcagtagagatggaactaag--agagaaccatcgactataaccccaaaagaacc 78119 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||| Sbjct: 78118 agatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccgaggcaattgtatt 78059 Query: 538 tgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 78058 tgttttggtagatatgctcttcaagcacttgaacccacttgga 78016 Score = 163 bits (82), Expect = 8e-37 Identities = 115/122 (94%), Gaps = 3/122 (2%) Strand = Plus / Minus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||||| |||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 78562 aaaaaattgtcttatttgataaggttatgaattaacaaataag-acagg-aaag-agtaa 78506 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 78505 atattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataagagtaa 78446 Query: 124 aa 125 || Sbjct: 78445 aa 78444 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 78402 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 78343 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 78342 tgactatatatt 78331
>gb|AY847099.1| Chasmanthium laxum rpl16 gene, intron; chloroplast Length = 1165 Score = 345 bits (174), Expect = 1e-91 Identities = 271/301 (90%), Gaps = 12/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 |||||||||||||||||| |||| || ||||||||||||| |||||||| ||||| Sbjct: 856 cctaactttttctattatatattgatatgtatctatccgta-----atatttttgaatat 910 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 |||||||||||||||||| || ||||||||||| |||| |||||||||||||||| Sbjct: 911 tatggaattagagaaattcg----cacgctttctcatttcatttgcgaggagctggatga 966 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||| Sbjct: 967 gaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accgtcgac 1024 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 ||||||||||||||||| |||||||| || |||||||||||||||||||| ||||||||| Sbjct: 1025 tataaccccaaaagaactagatttcgtaa-caacatagaggaagaatgaagggaaaatcc 1083 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1084 tgccgaggcaatagtatttgttttggtagatatgctcttcaagtacttgaacccgcttgg 1143 Query: 580 a 580 | Sbjct: 1144 a 1144 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/81 (91%), Gaps = 3/81 (3%) Strand = Plus / Plus Query: 15 ttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaaatattcgcccg 74 |||||||||||| ||||||||||||||||||| ||||| |||| |||||||||||||||| Sbjct: 633 ttatttggtaaggttataaattaacaaataag-acagg-aaag-agtaaatattcgcccg 689 Query: 75 cgaaattcttattgaattaga 95 |||||| |||||| |||||| Sbjct: 690 cgaaatctttattggattaga 710 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 198 tggatatattctagatcttcttttttgactat 229 ||||||||||||||||||||||| |||||||| Sbjct: 786 tggatatattctagatcttctttcttgactat 817
>gb|AF133464.1|AF133464 Lithachne pauciflora ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1189 Score = 345 bits (174), Expect = 1e-91 Identities = 264/293 (90%), Gaps = 11/293 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||||||||||||||| | ||||||||||| |||||||| ||||| Sbjct: 879 cctaactttttctattatctattaatgtgcatctatccgta-----atatttttgaatat 933 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 |||| | ||||| |||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 934 tatgaagttagataaatttg----cacgctttctcatttcattcgcgaggagctggatga 989 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||| ||||||||||||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 990 gaagaaactttcatgtccagttttgcagtagagatggaactaaaaaaga--accatcgac 1047 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 ||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1048 tataaccccaaaagaaccaaatttcgtaaacaacatagaggaagaatgaagggaaaatcc 1107 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacc 572 | |||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1108 taccgaagcagtcgtatttgttttggtagatatgctcttcaagcacttgaacc 1160 Score = 123 bits (62), Expect = 7e-25 Identities = 107/118 (90%), Gaps = 3/118 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||||||||||| ||||| ||||||||||||||||||| | ||| |||| ||||| Sbjct: 644 aaaaaattgtcttatttagtaaggttataaattaacaaataag-atagg-aaag-agtaa 700 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagt 121 ||||||||||||||||| ||||||||| | ||| ||||||| |||||||||||||||| Sbjct: 701 atattcgcccgcgaaatccttattgaagtggaaaactttactgcgattcaataagagt 758 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%), Gaps = 5/73 (6%) Strand = Plus / Plus Query: 191 acacatctggatatattctagatcttcttttttgactatatattatatttttctgtttta 250 |||||||| ||||||||||||||||| ||| ||||||| ||||||||||| ||||| Sbjct: 802 acacatctagatatattctagatcttttttcttgacta-----tatatttttctatttta 856 Query: 251 acaaattcaatat 263 |||||||| |||| Sbjct: 857 acaaattccatat 869
>gb|AF276970.1| Spartina maritima ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 656 Score = 343 bits (173), Expect = 4e-91 Identities = 264/292 (90%), Gaps = 12/292 (4%) Strand = Plus / Plus Query: 289 ttctattatctattaatgngtatctatccgtaccgtaatatttttaaatattatggaatt 348 ||||||||| |||| ||| ||||||||||||| |||||||| |||||||||||||| Sbjct: 357 ttctattatatattgatgtgtatctatccgta-----atatttttgaatattatggaatt 411 Query: 349 agagaaatttatttacatgctttctcattccattcgcgaggagctggatgagaagaaact 408 || |||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 412 tgaaaaatttg----catgctttctcatttcattcgcgaggagctggatgagaagaaact 467 Query: 409 ctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgactataacccc 468 |||||||||||||||| ||||||| |||||||| ||||| |||||||||||||||||| Sbjct: 468 ctcatgtccagttttgacgtagaga-ggaactaaaaaaga--accatcgactataacccc 524 Query: 469 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 528 |||||||| |||||||| ||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 525 aaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccgaggc 584 Query: 529 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 585 aatcgtatttgttttggtagatatgctcttcaagtacttgaacccgcttgga 636 Score = 95.6 bits (48), Expect = 2e-16 Identities = 90/100 (90%), Gaps = 3/100 (3%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| |||||||||||| ||||||||||||||||||| ||| | |||| ||||| Sbjct: 95 aaaaaattgctttatttggtaaggttataaattaacaaataag-acaag-aaag-agtaa 151 Query: 64 atattcgcccgcgaaattcttattgaattagaatacttta 103 ||||||||||||||||| |||||| |||||||||||||| Sbjct: 152 atattcgcccgcgaaatctttattggattagaatacttta 191 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 108 gattcaataagagtaaaaataaggatatt 136 ||||||||||| |||||||||||||||| Sbjct: 220 gattcaataaggttaaaaataaggatatt 248
>gb|AF276969.1| Spartina anglica ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 680 Score = 343 bits (173), Expect = 4e-91 Identities = 264/292 (90%), Gaps = 12/292 (4%) Strand = Plus / Plus Query: 289 ttctattatctattaatgngtatctatccgtaccgtaatatttttaaatattatggaatt 348 ||||||||| |||| ||| ||||||||||||| |||||||| |||||||||||||| Sbjct: 381 ttctattatatattgatgtgtatctatccgta-----atatttttgaatattatggaatt 435 Query: 349 agagaaatttatttacatgctttctcattccattcgcgaggagctggatgagaagaaact 408 || |||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 436 tgaaaaatttg----catgctttctcatttcattcgcgaggagctggatgagaagaaact 491 Query: 409 ctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgactataacccc 468 |||||||||||||||| ||||||| |||||||| ||||| |||||||||||||||||| Sbjct: 492 ctcatgtccagttttgacgtagaga-ggaactaaaaaaga--accatcgactataacccc 548 Query: 469 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 528 |||||||| |||||||| ||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 549 aaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccgaggc 608 Query: 529 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 609 aatcgtatttgttttggtagatatgctcttcaagtacttgaacccgcttgga 660 Score = 101 bits (51), Expect = 2e-18 Identities = 102/115 (88%), Gaps = 3/115 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| |||||||||||| ||||||||||||||||||| ||| | |||| ||||| Sbjct: 95 aaaaaattgctttatttggtaaggttataaattaacaaataag-acaag-aaag-agtaa 151 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataag 118 ||||||||||||||||| |||||| ||||||||||||||| ||||||||||| Sbjct: 152 atattcgcccgcgaaatctttattggattagaatactttactatgattcaataag 206 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 108 gattcaataagagtaaaaataaggatatt 136 ||||||||||| |||||||||||||||| Sbjct: 244 gattcaataaggttaaaaataaggatatt 272
>gb|AF276968.1| Spartina alterniflora ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 680 Score = 343 bits (173), Expect = 4e-91 Identities = 264/292 (90%), Gaps = 12/292 (4%) Strand = Plus / Plus Query: 289 ttctattatctattaatgngtatctatccgtaccgtaatatttttaaatattatggaatt 348 ||||||||| |||| ||| ||||||||||||| |||||||| |||||||||||||| Sbjct: 381 ttctattatatattgatgtgtatctatccgta-----atatttttgaatattatggaatt 435 Query: 349 agagaaatttatttacatgctttctcattccattcgcgaggagctggatgagaagaaact 408 || |||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 436 tgaaaaatttg----catgctttctcatttcattcgcgaggagctggatgagaagaaact 491 Query: 409 ctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgactataacccc 468 |||||||||||||||| ||||||| |||||||| ||||| |||||||||||||||||| Sbjct: 492 ctcatgtccagttttgacgtagaga-ggaactaaaaaaga--accatcgactataacccc 548 Query: 469 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 528 |||||||| |||||||| ||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 549 aaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccgaggc 608 Query: 529 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 609 aatcgtatttgttttggtagatatgctcttcaagtacttgaacccgcttgga 660 Score = 101 bits (51), Expect = 2e-18 Identities = 102/115 (88%), Gaps = 3/115 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| |||||||||||| ||||||||||||||||||| ||| | |||| ||||| Sbjct: 95 aaaaaattgctttatttggtaaggttataaattaacaaataag-acaag-aaag-agtaa 151 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataag 118 ||||||||||||||||| |||||| ||||||||||||||| ||||||||||| Sbjct: 152 atattcgcccgcgaaatctttattggattagaatactttactatgattcaataag 206 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 108 gattcaataagagtaaaaataaggatatt 136 ||||||||||| |||||||||||||||| Sbjct: 244 gattcaataaggttaaaaataaggatatt 272
>ref|XM_450631.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2141 Score = 341 bits (172), Expect = 2e-90 Identities = 256/283 (90%), Gaps = 11/283 (3%) Strand = Plus / Plus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| ||||||||| ||||||||||| |||||| ||||||||||||| Sbjct: 410 ctattaatgtgtatctatc-----cgtaatattttagaatattgtggaattagagaa--- 461 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 462 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 520 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 521 agttttgcagtagagatggaactaag--agagaaccattgactataaccccaaaagaacc 578 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||| Sbjct: 579 agatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccgaggcaattgtatt 638 Query: 538 tgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 639 tgttttggtagatatgctcttcaagcacttgaacccacttgga 681 Score = 125 bits (63), Expect = 2e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataag 118 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 197 agtaaatattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataag 256 Query: 119 agtaaaa 125 ||||||| Sbjct: 257 agtaaaa 263 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 296 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 355 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 356 tgactatatatt 367
>ref|XM_506652.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1001_G09.24 mRNA Length = 1742 Score = 341 bits (172), Expect = 2e-90 Identities = 256/283 (90%), Gaps = 11/283 (3%) Strand = Plus / Plus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| |||||||||| |||||||||| |||||| ||||||||||||| Sbjct: 625 ctattaatgtgtatctatcc-----gtaatattttagaatattgtggaattagagaa--- 676 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 677 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 735 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 736 agttttgcagtagagatggaactaag--agagaaccattgactataaccccaaaagaacc 793 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||| Sbjct: 794 agatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccgaggcaattgtatt 853 Query: 538 tgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 854 tgttttggtagatatgctcttcaagcacttgaacccacttgga 896 Score = 125 bits (63), Expect = 2e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataag 118 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 412 agtaaatattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataag 471 Query: 119 agtaaaa 125 ||||||| Sbjct: 472 agtaaaa 478 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 511 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 570 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 571 tgactatatatt 582
>ref|XM_481019.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2157 Score = 341 bits (172), Expect = 2e-90 Identities = 256/283 (90%), Gaps = 11/283 (3%) Strand = Plus / Plus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| ||||||||||| ||||||||| |||||| ||||||||||||| Sbjct: 424 ctattaatgtgtatctatccg-----taatattttagaatattgtggaattagagaa--- 475 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 476 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 534 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 535 agttttgcagtagagatggaactaag--agagaaccatcgactataaccccaaaagaacc 592 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| ||||||||||| ||||||||||| |||||||||| |||||||||| ||||| Sbjct: 593 agatttcgtaaacaacataggggaagaatgaagggaaaatcctaccgaggcaattgtatt 652 Query: 538 tgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 653 tgttttggtagatatgctcttcaagcacttgaacccacttgga 695 Score = 163 bits (82), Expect = 8e-37 Identities = 115/122 (94%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||||| |||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 158 aaaaaattgtcttatttgataaggttatgaattaacaaataag-acagg-aaag-agtaa 214 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 215 atattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataagagtaa 274 Query: 124 aa 125 || Sbjct: 275 aa 276 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 310 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 369 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 370 tgactatatatt 381
>ref|XM_507181.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0036E18.24 mRNA Length = 2157 Score = 341 bits (172), Expect = 2e-90 Identities = 256/283 (90%), Gaps = 11/283 (3%) Strand = Plus / Plus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| ||||||||||| ||||||||| |||||| ||||||||||||| Sbjct: 424 ctattaatgtgtatctatccg-----taatattttagaatattgtggaattagagaa--- 475 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 476 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 534 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 535 agttttgcagtagagatggaactaag--agagaaccatcgactataaccccaaaagaacc 592 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| ||||||||||| ||||||||||| |||||||||| |||||||||| ||||| Sbjct: 593 agatttcgtaaacaacataggggaagaatgaagggaaaatcctaccgaggcaattgtatt 652 Query: 538 tgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 653 tgttttggtagatatgctcttcaagcacttgaacccacttgga 695 Score = 163 bits (82), Expect = 8e-37 Identities = 115/122 (94%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||||| |||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 158 aaaaaattgtcttatttgataaggttatgaattaacaaataag-acagg-aaag-agtaa 214 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 215 atattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataagagtaa 274 Query: 124 aa 125 || Sbjct: 275 aa 276 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 310 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 369 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 370 tgactatatatt 381
>gb|AY847101.1| Orthoclada laxa ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1068 Score = 341 bits (172), Expect = 2e-90 Identities = 227/244 (93%), Gaps = 6/244 (2%) Strand = Plus / Plus Query: 337 tattatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctgga 396 ||||||||||||||||||||| || ||||||| ||| |||||||||||||||||| Sbjct: 810 tattatggaattagagaaattcg----cacgctttcttatttcattcgcgaggagctgga 865 Query: 397 tgagaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatc 456 |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 866 tgagaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatc 923 Query: 457 gactataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaa 516 |||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||| Sbjct: 924 gactataaccccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaa 983 Query: 517 tccttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgct 576 |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 984 tcctgccgaggcaatcgtatttgttttggtagatatgctcttcaagtacttgaacccgct 1043 Query: 577 tgga 580 |||| Sbjct: 1044 tgga 1047 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/81 (90%), Gaps = 3/81 (3%) Strand = Plus / Plus Query: 15 ttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaaatattcgcccg 74 |||||||||||| ||||||||||||||||||| ||||| |||| |||||| ||||||||| Sbjct: 639 ttatttggtaaggttataaattaacaaataag-acagg-aaag-agtaaacattcgcccg 695 Query: 75 cgaaattcttattgaattaga 95 |||||| |||||| |||||| Sbjct: 696 cgaaatctttattggattaga 716
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 341 bits (172), Expect = 2e-90 Identities = 256/283 (90%), Gaps = 11/283 (3%) Strand = Plus / Plus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| |||||||||| |||||||||| |||||| ||||||||||||| Sbjct: 9258761 ctattaatgtgtatctatcc-----gtaatattttagaatattgtggaattagagaa--- 9258812 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9258813 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 9258871 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9258872 agttttgcagtagagatggaactaag--agagaaccatcgactataaccccaaaagaacc 9258929 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| ||||||||||| ||||||||||| |||||||||| |||||||||| ||||| Sbjct: 9258930 agatttcgtaaacaacataggggaagaatgaagggaaaatcctaccgaggcaattgtatt 9258989 Query: 538 tgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 9258990 tgttttggtagatatgctcttcaagcacttgaacccacttgga 9259032 Score = 163 bits (82), Expect = 8e-37 Identities = 115/122 (94%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||||| |||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 9258495 aaaaaattgtcttatttgataaggttatgaattaacaaataag-acagg-aaag-agtaa 9258551 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9258552 atattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataagagtaa 9258611 Query: 124 aa 125 || Sbjct: 9258612 aa 9258613 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 9258647 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 9258706 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 9258707 tgactatatatt 9258718 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 385 cgaggagctggatgagaagaaactctcatg 414 ||||||||||||||||||||| |||||||| Sbjct: 20690526 cgaggagctggatgagaagaagctctcatg 20690555 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 450 aaccatcgactataaccccaaaa 472 ||||||||||||||||||||||| Sbjct: 20690821 aaccatcgactataaccccaaaa 20690843 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 358 tatttacatgctttctcattc 378 ||||||||||||||||||||| Sbjct: 19893419 tatttacatgctttctcattc 19893439
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 341 bits (172), Expect = 2e-90 Identities = 256/283 (90%), Gaps = 11/283 (3%) Strand = Plus / Plus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| ||||||||| ||||||||||| |||||| ||||||||||||| Sbjct: 69974 ctattaatgtgtatctatc-----cgtaatattttagaatattgtggaattagagaa--- 70025 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 70026 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 70084 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 70085 agttttgcagtagagatggaactaag--agagaaccatcgactataaccccaaaagaacc 70142 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| ||||||||||| ||||||||||| |||||||||| |||||||||| ||||| Sbjct: 70143 agatttcgtaaacaacataggggaagaatgaagggaaaatcctaccgaggcaattgtatt 70202 Query: 538 tgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 70203 tgttttggtagatatgctcttcaagcacttgaacccacttgga 70245 Score = 163 bits (82), Expect = 8e-37 Identities = 115/122 (94%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||||| |||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 69708 aaaaaattgtcttatttgataaggttatgaattaacaaataag-acagg-aaag-agtaa 69764 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 69765 atattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataagagtaa 69824 Query: 124 aa 125 || Sbjct: 69825 aa 69826 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 69860 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 69919 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 69920 tgactatatatt 69931
>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1001_G09 Length = 118018 Score = 341 bits (172), Expect = 2e-90 Identities = 256/283 (90%), Gaps = 11/283 (3%) Strand = Plus / Plus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| ||||||||||| ||||||||| |||||| ||||||||||||| Sbjct: 77072 ctattaatgtgtatctatccg-----taatattttagaatattgtggaattagagaa--- 77123 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 77124 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 77182 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 77183 agttttgcagtagagatggaactaag--agagaaccattgactataaccccaaaagaacc 77240 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||| Sbjct: 77241 agatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccgaggcaattgtatt 77300 Query: 538 tgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 77301 tgttttggtagatatgctcttcaagcacttgaacccacttgga 77343 Score = 125 bits (63), Expect = 2e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataag 118 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 76859 agtaaatattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataag 76918 Query: 119 agtaaaa 125 ||||||| Sbjct: 76919 agtaaaa 76925 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 76958 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 77017 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 77018 tgactatatatt 77029
>dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0441A12 Length = 185437 Score = 341 bits (172), Expect = 2e-90 Identities = 256/283 (90%), Gaps = 11/283 (3%) Strand = Plus / Plus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| ||||||||| ||||||||||| |||||| ||||||||||||| Sbjct: 62 ctattaatgtgtatctatc-----cgtaatattttagaatattgtggaattagagaa--- 113 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 114 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 172 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 173 agttttgcagtagagatggaactaag--agagaaccattgactataaccccaaaagaacc 230 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||| Sbjct: 231 agatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccgaggcaattgtatt 290 Query: 538 tgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 291 tgttttggtagatatgctcttcaagcacttgaacccacttgga 333
>gb|AF133483.1|AF133483 Zeugites pittieri ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1107 Score = 339 bits (171), Expect = 6e-90 Identities = 204/214 (95%), Gaps = 2/214 (0%) Strand = Plus / Plus Query: 367 gctttctcattccattcgcgaggagctggatgagaagaaactctcatgtccagttttgga 426 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 875 gctttcttatttcattcgcgaggagctggatgagaagaaactctcatgtccagttttgca 934 Query: 427 gtagagatggaactaagaaagagaaccatcgactataaccccaaaagaaccagatttcgc 486 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 935 gtagagatggaactaagaaaga--accatcgactataaccccaaaagaactagatttcgt 992 Query: 487 aaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggt 546 ||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||| Sbjct: 993 aaacaacatagaggaagaatgaagggcaaatcctgccgaggcaatcgtatttgttttggt 1052 Query: 547 agatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||| Sbjct: 1053 agatatgctcttcaagcacttgaacccgcttgga 1086 Score = 79.8 bits (40), Expect = 9e-12 Identities = 82/92 (89%), Gaps = 3/92 (3%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| |||||||||||| ||||||||||||||||||| ||||| |||| ||||| Sbjct: 654 aaaaaattgctttatttggtaaggttataaattaacaaataag-acagg-aaag-agtaa 710 Query: 64 atattcgcccgcgaaattcttattgaattaga 95 | ||||||||||||||| |||||| |||||| Sbjct: 711 acattcgcccgcgaaatctttattggattaga 742
>gb|AY847098.1| Chasmanthium latifolium ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1132 Score = 337 bits (170), Expect = 2e-89 Identities = 269/301 (89%), Gaps = 11/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 |||| ||||||||||||| |||| || ||||||||||||| |||||||| ||||| Sbjct: 822 cctacctttttctattatatattgatatgtatctatccgta-----atatttttgaatat 876 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 |||||||||||||||||| || ||||||||||| |||| |||||||||||||||| Sbjct: 877 tatggaattagagaaattcg----cacgctttctcatttcatttgcgaggagctggatga 932 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| |||||||||||| |||||||||| ||| ||||| Sbjct: 933 gaagaaactctcatgtccagttttgcagtagagatggacctaagaaaga--accgtcgac 990 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 ||||||||||||||||| |||||||| || |||||||||||||||||||| ||||||||| Sbjct: 991 tataaccccaaaagaactagatttcgtaaccaacatagaggaagaatgaagggaaaatcc 1050 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 1051 tgccgaggcaatcgtatttgttttggtagatatgctcttcaagtacttgagcccgcttgg 1110 Query: 580 a 580 | Sbjct: 1111 a 1111 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 198 tggatatattctagatcttcttttttgactat 229 ||||||||||||||||||||||| |||||||| Sbjct: 754 tggatatattctagatcttctttcttgactat 785 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaattcttattgaattaga 95 |||||||||||||||||||||| |||||| |||||| Sbjct: 643 agtaaatattcgcccgcgaaatctttattggattaga 679
>gb|AY847094.1| Centotheca lappacea ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 815 Score = 337 bits (170), Expect = 2e-89 Identities = 269/301 (89%), Gaps = 11/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 |||||||||||||||||| |||| ||| |||||||||| || |||||||| ||||| Sbjct: 505 cctaactttttctattatatattgatgtgtatctatccata-----atatttttgaatat 559 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 || ||||||||||||||| || ||||| ||||| |||||| |||||||||||||| Sbjct: 560 tacggaattagagaaattgg----cacgctttatcatttcattcgtgaggagctggatga 615 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 616 gaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgac 673 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 ||||||||||||||||| |||||||| || |||||||||||||||||||| ||||||||| Sbjct: 674 tataaccccaaaagaactagatttcgtaaccaacatagaggaagaatgaagggaaaatcc 733 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | ||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 734 tgccgaggccatcgtatctgttttggtagatatgctcttcaagtacttgaacccgcttgg 793 Query: 580 a 580 | Sbjct: 794 a 794 Score = 87.7 bits (44), Expect = 4e-14 Identities = 111/129 (86%), Gaps = 12/129 (9%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| |||||||||||| ||||||||||||||||||| ||||| |||| ||||| Sbjct: 281 aaaaaattgctttatttggtaaggttataaattaacaaataag-acagg-aaag-agtaa 337 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||| || |||||||||||||| | ||||||||||||| ||| Sbjct: 338 atattcgcccgcgaa--------tggattagaatacttta-cacgattcaataagaataa 388 Query: 124 aaataagga 132 ||||||||| Sbjct: 389 aaataagga 397 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 198 tggatatattctagatcttcttttttgactatatatt 234 ||||||||||||||||||||||| |||||||| |||| Sbjct: 438 tggatatattctagatcttctttattgactatctatt 474
>gb|AY912201.1| Cathariostachys capitata ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1202 Score = 337 bits (170), Expect = 2e-89 Identities = 269/301 (89%), Gaps = 11/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||||||||||||||| | ||||||||||| ||||||| ||||| Sbjct: 899 cctaactttttctattatctattaatgtgcatctatccgta-----atattttggaatat 953 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 954 tatggaattagagaaatttg----cacgctttctcatttcattcgcgaggagctggatga 1009 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||| Sbjct: 1010 gaagaaactctcatgtccagttttgcagtagagatggacctaagaaaga--accatcgac 1067 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 ||||||||||||||| |||||||||| | || ||||||||||||||||| ||||||||| Sbjct: 1068 tataaccccaaaagagccagatttcgtatccatcatagaggaagaatgaagggaaaatcc 1127 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | || ||| ||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1128 tgcctaggtaatggtatttgttttggtagatatgctcttcaagcacttgcccccgcttgg 1187 Query: 580 a 580 | Sbjct: 1188 a 1188 Score = 176 bits (89), Expect = 5e-41 Identities = 158/180 (87%), Gaps = 7/180 (3%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataag 118 |||| ||||||||||||||||| ||||||||||||||||||| |||||||||||| || Sbjct: 683 agtagatattcgcccgcgaaatctttattgaattagaatacttgcccgcgattcaatcag 742 Query: 119 agtaaaaataaggatatttttt----agaaggactacattattatctataaatatagaat 174 |||||||||||||| ||||||| |||| || |||||||| ||||||||||||||| Sbjct: 743 agtaaaaataaggagattttttgttaagaaagattacattat---ctataaatatagaat 799 Query: 175 ttagataaatatccacacacatctggatatattctagatcttcttttttgactatatatt 234 |||||||||| | ||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 800 atagataaatagacccacacatctagatatattctagatcttctttcttgactatatatt 859
>gb|AY847113.1| Micraira lazaridis ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 757 Score = 333 bits (168), Expect = 4e-88 Identities = 264/295 (89%), Gaps = 11/295 (3%) Strand = Plus / Plus Query: 286 tttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatattatgga 345 ||||| |||||| |||| ||| |||||||||| ||||||| ||| ||||||||||| Sbjct: 453 tttttatattatatattgatgtgtatctatcc-----gtaatatctttgaatattatgga 507 Query: 346 attagagaaatttatttacatgctttctcattccattcgcgaggagctggatgagaagaa 405 ||||||||| |||| || |||||||||| ||||||||||||||||||||||||||| Sbjct: 508 attagagaa----atttgcacactttctcatttcattcgcgaggagctggatgagaagaa 563 Query: 406 actctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgactataac 465 ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 564 actctcatgtccagttttgcagtagagatggaactaagaa--agaaccatcgactataac 621 Query: 466 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 525 || |||||||| |||||||| || |||||||||||||||||||| ||||||||| |||| Sbjct: 622 ccgaaaagaactagatttcgtaaccaacatagaggaagaatgaagggaaaatcccgccga 681 Query: 526 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||| |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 682 ggcaattgtatttgttttggtagatatgctcttcaagtacttgaacccgcttgga 736 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 198 tggatatattctagatcttcttttttgactatatatt 234 ||||||||||||||||||||||| || |||||||||| Sbjct: 418 tggatatattctagatcttctttctttactatatatt 454 Score = 58.0 bits (29), Expect = 3e-05 Identities = 42/45 (93%), Gaps = 1/45 (2%) Strand = Plus / Plus Query: 1 accaaaaaattgtcttatttggtaagtttataaattaacaaataa 45 |||||||||||| |||||||||||| |||||||||||||||||| Sbjct: 282 accaaaaaattgctttatttggtaag-ttataaattaacaaataa 325 Score = 52.0 bits (26), Expect = 0.002 Identities = 49/54 (90%), Gaps = 2/54 (3%) Strand = Plus / Plus Query: 84 tattgaattagaatactttaccgcgattcaata-agagtaaaaataaggatatt 136 ||||| |||||||||||||||| ||||| |||| ||||||||||||||| |||| Sbjct: 326 tattgtattagaatactttaccacgatt-aatatagagtaaaaataagggtatt 378
>gb|AY847105.1| Zeugites americanus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 944 Score = 333 bits (168), Expect = 4e-88 Identities = 223/240 (92%), Gaps = 6/240 (2%) Strand = Plus / Plus Query: 341 atggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatgag 400 ||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||| Sbjct: 690 atggaattagagaaattaat----atgctttcttatttcattcgcgaggagctggatgag 745 Query: 401 aagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgact 460 |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 746 aagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgact 803 Query: 461 ataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcct 520 |||||||||||||||| ||||||| ||||||||||||||||||||||| || ||||||| Sbjct: 804 ataaccccaaaagaactcgatttcgtaaacaacatagaggaagaatgaaggggaaatcct 863 Query: 521 tccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 864 gccgaggcaatcgtatttgttttggtagatatgctcttcaagtacttgaacccgcttgga 923 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/81 (87%), Gaps = 4/81 (4%) Strand = Plus / Plus Query: 15 ttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaaatattcgcccg 74 |||||||||||| |||||||| |||||||||| |||| |||| |||||| ||||||||| Sbjct: 516 ttatttggtaaggttataaat-aacaaataagg-cagg-aaag-agtaaacattcgcccg 571 Query: 75 cgaaattcttattgaattaga 95 |||||| |||||| |||||| Sbjct: 572 cgaaatctttattggattaga 592
>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006J12, complete sequence Length = 157069 Score = 333 bits (168), Expect = 4e-88 Identities = 249/275 (90%), Gaps = 11/275 (4%) Strand = Plus / Plus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| |||||||||| |||||||||| |||||| ||||||||||||| Sbjct: 145441 ctattaatgtgtatctatcc-----gtaatattttagaatattgtggaattagagaa--- 145492 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 145493 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 145551 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 145552 agttttgcagtagagatggaactaag--agagaaccatcgactataaccccaaaagaacc 145609 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| |||||||||||||||||||| || |||||||||| |||||||||| ||||| Sbjct: 145610 agatttcgtaaacaacatagaggaagaataaagggaaaatcctaccgaggcaattgtatt 145669 Query: 538 tgttttggtagatatgctcttcaagcacttgaacc 572 ||||||||||||||||||||||||||||||||||| Sbjct: 145670 tgttttggtagatatgctcttcaagcacttgaacc 145704 Score = 155 bits (78), Expect = 2e-34 Identities = 114/122 (93%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||||| |||| |||| |||||||||||||| ||| | |||| ||||| Sbjct: 145175 aaaaaattgtcttatttgataaggttatgaattaacaaataag-acatg-aaag-agtaa 145231 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 145232 atattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataagagtaa 145291 Query: 124 aa 125 || Sbjct: 145292 aa 145293 Score = 81.8 bits (41), Expect = 2e-12 Identities = 66/73 (90%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttctttt- 221 |||||||||||| |||||||||| || |||||||| ||||||||||||||| |||||| Sbjct: 145326 taaatatagaatatagataaataaacatacacatctagatatattctagatcctcttttc 145385 Query: 222 ttgactatatatt 234 ||||||||||||| Sbjct: 145386 ttgactatatatt 145398
>gb|AC104708.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1174_H11, complete sequence Length = 102567 Score = 333 bits (168), Expect = 4e-88 Identities = 249/275 (90%), Gaps = 11/275 (4%) Strand = Plus / Plus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| ||||||||||| ||||||||| |||||| ||||||||||||| Sbjct: 4628 ctattaatgtgtatctatccg-----taatattttagaatattgtggaattagagaa--- 4679 Query: 358 tatttacatgctttctcattccattcgcgaggagctggatgagaagaaactctcatgtcc 417 |||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 4680 -atttgcacactttctcatttgattcgcgaggagctggatgagaagaaactctcatgtcc 4738 Query: 418 agttttggagtagagatggaactaagaaagagaaccatcgactataaccccaaaagaacc 477 ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 4739 agttttgcagtagagatggaactaag--agagaaccatcgactataaccccaaaagaacc 4796 Query: 478 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 537 |||||||| |||||||||||||||||||| || |||||||||| |||||||||| ||||| Sbjct: 4797 agatttcgtaaacaacatagaggaagaataaagggaaaatcctaccgaggcaattgtatt 4856 Query: 538 tgttttggtagatatgctcttcaagcacttgaacc 572 ||||||||||||||||||||||||||||||||||| Sbjct: 4857 tgttttggtagatatgctcttcaagcacttgaacc 4891 Score = 155 bits (78), Expect = 2e-34 Identities = 114/122 (93%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||||| |||| |||| |||||||||||||| ||| | |||| ||||| Sbjct: 4362 aaaaaattgtcttatttgataaggttatgaattaacaaataag-acatg-aaag-agtaa 4418 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4419 atattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataagagtaa 4478 Query: 124 aa 125 || Sbjct: 4479 aa 4480 Score = 81.8 bits (41), Expect = 2e-12 Identities = 66/73 (90%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttctttt- 221 |||||||||||| |||||||||| || |||||||| ||||||||||||||| |||||| Sbjct: 4513 taaatatagaatatagataaataaacatacacatctagatatattctagatcctcttttc 4572 Query: 222 ttgactatatatt 234 ||||||||||||| Sbjct: 4573 ttgactatatatt 4585
>gb|AY847104.1| Zeugites sylvaticus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1051 Score = 331 bits (167), Expect = 1e-87 Identities = 203/214 (94%), Gaps = 2/214 (0%) Strand = Plus / Plus Query: 367 gctttctcattccattcgcgaggagctggatgagaagaaactctcatgtccagttttgga 426 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 819 gctttcttatttcattcgcgaggagctggatgagaagaaactctcatgtccagttttgca 878 Query: 427 gtagagatggaactaagaaagagaaccatcgactataaccccaaaagaaccagatttcgc 486 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 879 gtagagatggaactaagaaaga--accatcgactataaccccaaaagaactagatttcgt 936 Query: 487 aaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggt 546 ||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||| Sbjct: 937 aaacaacatagaggaagaatgaagggcaaatcctgccgaggcaatcgtatttgttttggt 996 Query: 547 agatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||| ||||||||||||||||| Sbjct: 997 agatatgctcttcaagtacttgaacccgcttgga 1030 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/81 (88%), Gaps = 3/81 (3%) Strand = Plus / Plus Query: 15 ttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaaatattcgcccg 74 |||||||||||| |||||||||| |||||||| ||||| |||| |||||| ||||||||| Sbjct: 609 ttatttggtaaggttataaattaccaaataag-acagg-aaag-agtaaacattcgcccg 665 Query: 75 cgaaattcttattgaattaga 95 | ||||| |||||| |||||| Sbjct: 666 ctaaatttttattggattaga 686
>gb|AY847102.1| Lophatherum gracile ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1078 Score = 331 bits (167), Expect = 1e-87 Identities = 203/214 (94%), Gaps = 2/214 (0%) Strand = Plus / Plus Query: 367 gctttctcattccattcgcgaggagctggatgagaagaaactctcatgtccagttttgga 426 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 846 gctttcttatttcattcgcgaggagctggatgagaagaaactctcatgtccagttttgca 905 Query: 427 gtagagatggaactaagaaagagaaccatcgactataaccccaaaagaaccagatttcgc 486 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 906 gtagagatggaactaagaaaga--accatcgactataaccccaaaagaactagatttcgt 963 Query: 487 aaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggt 546 ||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||| Sbjct: 964 aaacaacatagaggaagaatgaagggcaaatcctgccgaggcaatcgtatttgttttggt 1023 Query: 547 agatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||| ||||||||||||||||| Sbjct: 1024 agatatgctcttcaagtacttgaacccgcttgga 1057 Score = 69.9 bits (35), Expect = 9e-09 Identities = 83/95 (87%), Gaps = 3/95 (3%) Strand = Plus / Plus Query: 1 accaaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnag 60 |||||||||| | |||||||||||| |||||||||| |||||||| ||||| |||| || Sbjct: 628 accaaaaaatggctttatttggtaaggttataaattaccaaataag-acagg-aaag-ag 684 Query: 61 taaatattcgcccgcgaaattcttattgaattaga 95 |||| ||||||||||||||| |||||| |||||| Sbjct: 685 taaacattcgcccgcgaaatctttattggattaga 719
>gb|AY847080.1| Sporobolus indicus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1023 Score = 331 bits (167), Expect = 1e-87 Identities = 203/214 (94%), Gaps = 2/214 (0%) Strand = Plus / Plus Query: 367 gctttctcattccattcgcgaggagctggatgagaagaaactctcatgtccagttttgga 426 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 791 gctttctcatttcattcgcgaggagctggatgagaagaaactctcatgtccagttttgca 850 Query: 427 gtagagatggaactaagaaagagaaccatcgactataaccccaaaagaaccagatttcgc 486 |||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||| Sbjct: 851 gtagagatggaactaaaaaaga--accatcgactataaccccaaaagaactagatttcgt 908 Query: 487 aaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggt 546 ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct: 909 aaacaacatagaggaagaatgaagggaaaatcctgccgaggcaatcgtatttgttttggt 968 Query: 547 agatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||| ||||||||| ||||||| Sbjct: 969 agatatgctcttcaagtacttgaacctgcttgga 1002 Score = 113 bits (57), Expect = 7e-22 Identities = 117/133 (87%), Gaps = 3/133 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| |||||||||||| ||||||||||||||||||| ||| | |||| ||||| Sbjct: 615 aaaaaattgctttatttggtaaggttataaattaacaaataag-acaag-aaag-agtaa 671 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| |||||| ||||||||||||||| ||||||||||| ||| Sbjct: 672 atattcgcccgcgaaatctttattggattagaatactttactatgattcaataaggttaa 731 Query: 124 aaataaggatatt 136 ||| ||||||||| Sbjct: 732 aaaaaaggatatt 744
>gb|AY847077.1| Stipagrostis zeyheri ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1146 Score = 331 bits (167), Expect = 1e-87 Identities = 228/247 (92%), Gaps = 6/247 (2%) Strand = Plus / Plus Query: 334 aaatattatggaattagagaaatttatttacatgctttctcattccattcgcgaggagct 393 ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||| Sbjct: 885 aaatattatggaattagagaaatttg----cacgctttctcatttcattcgcgaggagct 940 Query: 394 ggatgagaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaacc 453 ||||||||||||| ||||||||||||||||| |||||||||||| ||||| || | ||| Sbjct: 941 ggatgagaagaaattctcatgtccagttttgcagtagagatggagctaaggaaaa--acc 998 Query: 454 atcgactataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaagga 513 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||| Sbjct: 999 atcgactataaccccaaaagaactagatttcgtaaacaacatagaggaagaatgaaggga 1058 Query: 514 aaatccttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaaccc 573 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1059 aaatcctgccgaggcaatcgtatttgttttggtagatatgctcttcaagtacttgaaccc 1118 Query: 574 gcttgga 580 ||||||| Sbjct: 1119 gcttgga 1125 Score = 69.9 bits (35), Expect = 9e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 84 tattgaattagaatactttaccgcgattcaataagagtaaaaa 126 ||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 670 tattggattagaatactttaccacgattcaataagagtaaaaa 712 Score = 46.1 bits (23), Expect = 0.13 Identities = 39/43 (90%), Gaps = 1/43 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataag 46 ||||||||| |||||||||| | ||||||||||||||||||| Sbjct: 628 aaaaaattgctttatttggta-gattataaattaacaaataag 669
>gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genomic sequence, complete sequence Length = 141691 Score = 331 bits (167), Expect = 1e-87 Identities = 237/259 (91%), Gaps = 6/259 (2%) Strand = Plus / Minus Query: 322 cgtaatatttttaaatattatggaattagagaaatttatttacatgctttctcattccat 381 ||||||||||| |||||| ||||||||||||||||| || |||||||||| || Sbjct: 15205 cgtaatattttagaatattgtggaattagagaaatttg----cacactttctcatttgat 15150 Query: 382 tcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaacta 441 ||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||| Sbjct: 15149 tcgcgaggagctggatgagaagaaactctcatgtctacttttgcagtagagatggaacta 15090 Query: 442 agaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagagga 501 ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 15089 aga--gagaaccatcgactataaccccaaaagaaccagatttcgtaaacaacatagagga 15032 Query: 502 agaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttcaa 561 |||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 15031 agaatgaagggaaaatcctaccgaggcaattgtatttgttttggtagatatgctcttcaa 14972 Query: 562 gcacttgaacccgcttgga 580 |||||||||||| |||||| Sbjct: 14971 gcacttgaacccacttgga 14953 Score = 79.8 bits (40), Expect = 9e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 14192 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 14251 Query: 223 tgactatatatt 234 |||| ||||||| Sbjct: 14252 tgaccatatatt 14263 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 102 taccgcgattcaataagagtaaaa 125 |||||||||||||||||||||||| Sbjct: 14137 taccgcgattcaataagagtaaaa 14160
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 331 bits (167), Expect = 1e-87 Identities = 237/259 (91%), Gaps = 6/259 (2%) Strand = Plus / Minus Query: 322 cgtaatatttttaaatattatggaattagagaaatttatttacatgctttctcattccat 381 ||||||||||| |||||| ||||||||||||||||| || |||||||||| || Sbjct: 24639019 cgtaatattttagaatattgtggaattagagaaatttg----cacactttctcatttgat 24638964 Query: 382 tcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaacta 441 ||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||| Sbjct: 24638963 tcgcgaggagctggatgagaagaaactctcatgtctacttttgcagtagagatggaacta 24638904 Query: 442 agaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagagga 501 ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 24638903 aga--gagaaccatcgactataaccccaaaagaaccagatttcgtaaacaacatagagga 24638846 Query: 502 agaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttcaa 561 |||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 24638845 agaatgaagggaaaatcctaccgaggcaattgtatttgttttggtagatatgctcttcaa 24638786 Query: 562 gcacttgaacccgcttgga 580 |||||||||||| |||||| Sbjct: 24638785 gcacttgaacccacttgga 24638767 Score = 79.8 bits (40), Expect = 9e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 24638006 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 24638065 Query: 223 tgactatatatt 234 |||| ||||||| Sbjct: 24638066 tgaccatatatt 24638077 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 102 taccgcgattcaataagagtaaaa 125 |||||||||||||||||||||||| Sbjct: 24637951 taccgcgattcaataagagtaaaa 24637974
>emb|AL732379.5|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0025B02 of library OSJNBa from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136470 Score = 331 bits (167), Expect = 1e-87 Identities = 237/259 (91%), Gaps = 6/259 (2%) Strand = Plus / Minus Query: 322 cgtaatatttttaaatattatggaattagagaaatttatttacatgctttctcattccat 381 ||||||||||| |||||| ||||||||||||||||| || |||||||||| || Sbjct: 71065 cgtaatattttagaatattgtggaattagagaaatttg----cacactttctcatttgat 71010 Query: 382 tcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaacta 441 ||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||| Sbjct: 71009 tcgcgaggagctggatgagaagaaactctcatgtctacttttgcagtagagatggaacta 70950 Query: 442 agaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagagga 501 ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 70949 aga--gagaaccatcgactataaccccaaaagaaccagatttcgtaaacaacatagagga 70892 Query: 502 agaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttcaa 561 |||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 70891 agaatgaagggaaaatcctaccgaggcaattgtatttgttttggtagatatgctcttcaa 70832 Query: 562 gcacttgaacccgcttgga 580 |||||||||||| |||||| Sbjct: 70831 gcacttgaacccacttgga 70813 Score = 79.8 bits (40), Expect = 9e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 70052 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 70111 Query: 223 tgactatatatt 234 |||| ||||||| Sbjct: 70112 tgaccatatatt 70123 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 102 taccgcgattcaataagagtaaaa 125 |||||||||||||||||||||||| Sbjct: 69997 taccgcgattcaataagagtaaaa 70020
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 331 bits (167), Expect = 1e-87 Identities = 237/259 (91%), Gaps = 6/259 (2%) Strand = Plus / Minus Query: 322 cgtaatatttttaaatattatggaattagagaaatttatttacatgctttctcattccat 381 ||||||||||| |||||| ||||||||||||||||| || |||||||||| || Sbjct: 24556488 cgtaatattttagaatattgtggaattagagaaatttg----cacactttctcatttgat 24556433 Query: 382 tcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaacta 441 ||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||| Sbjct: 24556432 tcgcgaggagctggatgagaagaaactctcatgtctacttttgcagtagagatggaacta 24556373 Query: 442 agaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagagga 501 ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 24556372 aga--gagaaccatcgactataaccccaaaagaaccagatttcgtaaacaacatagagga 24556315 Query: 502 agaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttcaa 561 |||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 24556314 agaatgaagggaaaatcctaccgaggcaattgtatttgttttggtagatatgctcttcaa 24556255 Query: 562 gcacttgaacccgcttgga 580 |||||||||||| |||||| Sbjct: 24556254 gcacttgaacccacttgga 24556236 Score = 79.8 bits (40), Expect = 9e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 24555475 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 24555534 Query: 223 tgactatatatt 234 |||| ||||||| Sbjct: 24555535 tgaccatatatt 24555546 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 102 taccgcgattcaataagagtaaaa 125 |||||||||||||||||||||||| Sbjct: 24555420 taccgcgattcaataagagtaaaa 24555443
>gb|AF133488.1|AF133488 Pharus lappulaceus ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1182 Score = 331 bits (167), Expect = 1e-87 Identities = 203/214 (94%), Gaps = 2/214 (0%) Strand = Plus / Plus Query: 367 gctttctcattccattcgcgaggagctggatgagaagaaactctcatgtccagttttgga 426 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 950 gctttctcatttcattcgcgaggagctggatgagaagaaactctcatgtccagttttgca 1009 Query: 427 gtagagatggaactaagaaagagaaccatcgactataaccccaaaagaaccagatttcgc 486 |||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1010 gtagagatggaattaagaaaga--accatcgactataaccccaaaagaactagatttcgt 1067 Query: 487 aaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggt 546 ||||||||||||||||||||||| ||||| |||| ||| ||||||||||||||||||||| Sbjct: 1068 aaacaacatagaggaagaatgaagggaaagtcctgccggggcaatcgtatttgttttggt 1127 Query: 547 agatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||| Sbjct: 1128 agatatgctcttcaagcacttgaacccgcttgga 1161 Score = 109 bits (55), Expect = 1e-20 Identities = 109/123 (88%), Gaps = 3/123 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| |||||||||||| ||||||||| | |||||| ||||| |||| ||||| Sbjct: 613 aaaaaattgctttatttggtaaggttataaattgatgaataag-acagg-aaag-agtaa 669 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| |||||| ||||||||||||||| | |||||||||||||||| Sbjct: 670 atattcgcccgcgaaatctttattggattagaatactttactgtgattcaataagagtaa 729 Query: 124 aaa 126 ||| Sbjct: 730 aaa 732 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 177 agataaatatccacacacatctggatatattctagatcttcttttttgactatatat 233 ||||||||| ||||||| ||| ||||||||||| ||||||||| |||| ||||||| Sbjct: 779 agataaatagacacacacgtctagatatattctatatcttctttcttgattatatat 835 Score = 54.0 bits (27), Expect = 5e-04 Identities = 53/62 (85%), Gaps = 5/62 (8%) Strand = Plus / Plus Query: 287 ttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatattatggaa 346 |||| ||||||||||||||| |||||||||||| |||||||| |||||||||||| Sbjct: 874 ttttgtattatctattaatgtatatctatccgta-----atatttttgaatattatggaa 928 Query: 347 tt 348 || Sbjct: 929 tt 930
>gb|AY847112.1| Cyperochloa hirsuta ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 931 Score = 329 bits (166), Expect = 6e-87 Identities = 268/301 (89%), Gaps = 11/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 |||||||||||||||||| |||| ||| ||||||||||||| ||||| |||||| Sbjct: 621 cctaactttttctattatatattgatgtgtatctatccgta-----atattcaaaaatat 675 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 || ||||||||||||||| |||||||| ||||| |||||| |||||||||||||| Sbjct: 676 tacggaattagagaaattgg----catgctttatcatttcattcgtgaggagctggatga 731 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||| ||||||||||||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 732 gaagaaactatcatgtccagttttgcagtagagatggaactaaaaaaga--accatcgac 789 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 ||||||||||||||||| | |||||| ||||||||||||||||||||||| ||||||||| Sbjct: 790 tataaccccaaaagaactatatttcgtaaacaacatagaggaagaatgaagggaaaatcc 849 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 850 tgccgaggcaatcgtatctgttttggtagatatgctcttcaagtacttgaacccgcttgg 909 Query: 580 a 580 | Sbjct: 910 a 910 Score = 109 bits (55), Expect = 1e-20 Identities = 106/118 (89%), Gaps = 4/118 (3%) Strand = Plus / Plus Query: 15 ttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaaatattcgcccg 74 |||||||||||| |||||||||||||||||| ||||| |||| |||||||||||||||| Sbjct: 396 ttatttggtaaggttataaattaacaaataa-aacagg-aaag-agtaaatattcgcccg 452 Query: 75 cgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 132 |||||| |||||| |||| ||||||||| | ||||||||||||| |||||||||||| Sbjct: 453 cgaaatctttattggattaaaatacttta-cacgattcaataagaataaaaataagga 509 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 198 tggatatattctagatcttcttttttgactatatatt 234 ||||||||||||| ||||||||| |||||||| |||| Sbjct: 552 tggatatattctaaatcttctttcttgactatctatt 588
>gb|AY847088.1| Loudetia simplex ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1028 Score = 329 bits (166), Expect = 6e-87 Identities = 268/301 (89%), Gaps = 11/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 |||||||||||||||||| |||| ||| |||||||||| || ||||||| ||||| Sbjct: 718 cctaactttttctattatatattgatgtgtatctatccata-----atattttggaatat 772 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 |||||||||||| ||||| || |||||||||| |||||||||||||||| |||| Sbjct: 773 tatggaattagacaaattcg----cacactttctcatttcattcgcgaggagctgtatga 828 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| || Sbjct: 829 gaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatctac 886 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 ||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 887 tataaccccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcc 946 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | ||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||| Sbjct: 947 taccgaggcaatcgtatatgttttggtagatatgcccttcaagtacttgaacccgcttgg 1006 Query: 580 a 580 | Sbjct: 1007 a 1007 Score = 131 bits (66), Expect = 3e-27 Identities = 108/118 (91%), Gaps = 3/118 (2%) Strand = Plus / Plus Query: 15 ttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaaatattcgcccg 74 |||||||||||| ||||||||||||||||||| ||||| |||| |||||||||||||||| Sbjct: 591 ttatttggtaaggttataaattaacaaataag-acagg-aaag-agtaaatattcgcccg 647 Query: 75 cgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 132 |||||| |||||| |||||||||||||| | ||||||||||||| |||||||||||| Sbjct: 648 cgaaatctttattggattagaatactttatcacgattcaataagaataaaaataagga 705
>gb|AY847087.1| Danthoniopsis petiolata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1147 Score = 329 bits (166), Expect = 6e-87 Identities = 268/301 (89%), Gaps = 11/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 |||||| ||||||||||| ||| ||| ||||||||||||| ||||||| ||||| Sbjct: 837 cctaaccttttctattatatatggatgtgtatctatccgta-----atattttggaatat 891 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 |||||||||||| ||||| || |||||||||| ||||||||||||||||||||| Sbjct: 892 tatggaattagacaaattcg----cacactttctcatttcattcgcgaggagctggatga 947 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||| Sbjct: 948 gaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accgtcgac 1005 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 ||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1006 tataaccccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcc 1065 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | ||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||| Sbjct: 1066 taccgaggcaatcgtatatgttttggtagatatgcccttcaagtacttgaacccgcttgg 1125 Query: 580 a 580 | Sbjct: 1126 a 1126 Score = 129 bits (65), Expect = 1e-26 Identities = 117/129 (90%), Gaps = 4/129 (3%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| |||||||||||| ||||||||||||||||||| ||||| |||| ||||| Sbjct: 608 aaaaaattgctttatttggtaaggttataaattaacaaataag-acagg-aaag-agtaa 664 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| |||||| |||||||||||||| | ||||||||||||| ||| Sbjct: 665 atattcgcccgcgaaatctttattggattagaatacttta-cacgattcaataagaataa 723 Query: 124 aaataagga 132 ||||||||| Sbjct: 724 aaataagga 732 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 201 atatattctagatcttcttttttgactatatatt 234 |||||||||||||||||||| ||||||||||||| Sbjct: 777 atatattctagatcttctttcttgactatatatt 810
>gb|AF133490.1|AF133490 Streptochaeta angustifolia ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1243 Score = 329 bits (166), Expect = 6e-87 Identities = 265/297 (89%), Gaps = 11/297 (3%) Strand = Plus / Plus Query: 284 actttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatattatg 343 ||||||| ||||||||||||||| ||||||||||||| ||||||| | ||||||| Sbjct: 937 actttttgtattatctattaatgtgtatctatccgta-----atattttggagtattatg 991 Query: 344 gaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatgagaag 403 ||||| ||| ||||| || ||||||||||| ||||||||||||||||||||||||| Sbjct: 992 gaattggaggaatttg----cacgctttctcatttcattcgcgaggagctggatgagaag 1047 Query: 404 aaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgactata 463 |||||||||||||||||| || ||||||||||||| ||||||||| |||||||| |||| Sbjct: 1048 aaactctcatgtccagttctgcagtagagatggaattaagaaaga--accatcgattata 1105 Query: 464 accccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttcc 523 ||||||||||||| |||||||| ||||||||||||||||||||||| ||||| |||| || Sbjct: 1106 accccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaagtcctgcc 1165 Query: 524 gaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 1166 gaggcaatcgtatttgttttggcagatatgctcttcaagcacttgaacccacttgga 1222 Score = 85.7 bits (43), Expect = 1e-13 Identities = 118/139 (84%), Gaps = 8/139 (5%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| |||||||||||| || | |||| || |||||| ||||| |||| ||||| Sbjct: 672 aaaaaattgctttatttggtaaggttttgaattgacgaataag-acagg-aaag-agtaa 728 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttac-----cgcgattcaataag 118 ||||||||||||||||| |||||| |||| |||||||||| || ||||||||||| Sbjct: 729 atattcgcccgcgaaatctttattggattacaatactttactttaccgtgattcaataag 788 Query: 119 agtaaaaataaggatattt 137 |||||||||||||| |||| Sbjct: 789 agtaaaaataaggagattt 807 Score = 44.1 bits (22), Expect = 0.50 Identities = 49/58 (84%) Strand = Plus / Plus Query: 176 tagataaatatccacacacatctggatatattctagatcttcttttttgactatatat 233 |||||||||| |||| |||||| |||| ||| || |||||||| |||||||||||| Sbjct: 844 tagataaatagacacagacatctagatagattttatctcttctttcttgactatatat 901
>gb|AY847090.1| Isachne arundinacea ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1101 Score = 325 bits (164), Expect = 9e-86 Identities = 225/244 (92%), Gaps = 6/244 (2%) Strand = Plus / Plus Query: 337 tattatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctgga 396 ||||||||||||||| |||||| |||||||||||||| |||||||||||||||||| Sbjct: 843 tattatggaattagataaatttg----catgctttctcatttcattcgcgaggagctgga 898 Query: 397 tgagaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatc 456 |||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||| Sbjct: 899 tgagaagaaactctcatgtccagttttgcaatagagatggaactaagaaaga--accatc 956 Query: 457 gactataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaa 516 |||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||| Sbjct: 957 gactataaccccaaaagaactcgatttcgtaaacaacatagaggaagaatgaagggaaaa 1016 Query: 517 tccttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgct 576 ||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1017 tcccacagaggcaatcgtatttgttttggtagatatgctcttcaagtacttgaacccgct 1076 Query: 577 tgga 580 |||| Sbjct: 1077 tgga 1080 Score = 135 bits (68), Expect = 2e-28 Identities = 117/128 (91%), Gaps = 4/128 (3%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| |||||||||||||| ||||||||||||||||| ||||| |||| ||||| Sbjct: 591 aaaaaattgctttatttggtaagtt-ataaattaacaaataag-acagg-aaag-agtaa 646 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 | ||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||| Sbjct: 647 aaattcgcccgcgaaatctttattggattagaatactttaccacgattcaataagagtaa 706 Query: 124 aaataagg 131 |||||||| Sbjct: 707 aaataagg 714 Score = 44.1 bits (22), Expect = 0.50 Identities = 37/42 (88%) Strand = Plus / Plus Query: 193 acatctggatatattctagatcttcttttttgactatatatt 234 |||| |||||||||| |||||||||||| | |||||||||| Sbjct: 754 acatttggatatattatagatcttctttctaaactatatatt 795
>gb|AY847107.1| Zeugites hackelii ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1073 Score = 323 bits (163), Expect = 4e-85 Identities = 202/214 (94%), Gaps = 2/214 (0%) Strand = Plus / Plus Query: 367 gctttctcattccattcgcgaggagctggatgagaagaaactctcatgtccagttttgga 426 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 841 gctttcttatttcattcgcgaggagctggatgagaagaaactctcatgtccagttttgca 900 Query: 427 gtagagatggaactaagaaagagaaccatcgactataaccccaaaagaaccagatttcgc 486 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 901 gtagagatggaactaagaaaga--accatcgactataaccccaaaagaactagatttcgt 958 Query: 487 aaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggt 546 ||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||| Sbjct: 959 aaacaacatagaggaagaatgaagggcaaatcctgccgaggcaatcgtatttgttttggt 1018 Query: 547 agatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||| |||||| |||||||||| Sbjct: 1019 agatatgctcttcaagtacttgagcccgcttgga 1052 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/64 (90%), Gaps = 3/64 (4%) Strand = Plus / Plus Query: 15 ttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaaatattcgcccg 74 |||||||||||| |||||||||| |||||||| ||||| |||| |||||| ||||||||| Sbjct: 638 ttatttggtaaggttataaattaccaaataag-acagg-aaag-agtaaacattcgcccg 694 Query: 75 cgaa 78 |||| Sbjct: 695 cgaa 698
>gb|AY847106.1| Zeugites capillaris ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1062 Score = 323 bits (163), Expect = 4e-85 Identities = 202/214 (94%), Gaps = 2/214 (0%) Strand = Plus / Plus Query: 367 gctttctcattccattcgcgaggagctggatgagaagaaactctcatgtccagttttgga 426 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 837 gctttcttatttcattcgcgaggagctggatgagaagaaactctcatgtccagttttgca 896 Query: 427 gtagagatggaactaagaaagagaaccatcgactataaccccaaaagaaccagatttcgc 486 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 897 gtagagatggaactaagaaaga--accatcgactataaccccaaaagaactagatttcgt 954 Query: 487 aaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggt 546 ||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||| Sbjct: 955 aaacaacatagaggaagaatgaagggcaaatcctgccgaggcaatcgtatttgttttggc 1014 Query: 547 agatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||| ||||||||||||||||| Sbjct: 1015 agatatgctcttcaagtacttgaacccgcttgga 1048 Score = 60.0 bits (30), Expect = 8e-06 Identities = 60/66 (90%), Gaps = 3/66 (4%) Strand = Plus / Plus Query: 15 ttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaaatattcgcccg 74 |||||||||||| |||||||||| |||||||| ||||| |||| |||||| ||||||||| Sbjct: 634 ttatttggtaaggttataaattaccaaataag-acagg-aaag-agtaaacattcgcccg 690 Query: 75 cgaaat 80 |||||| Sbjct: 691 cgaaat 696
>gb|AY847084.1| Pennisetum setaceum ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1016 Score = 323 bits (163), Expect = 4e-85 Identities = 227/247 (91%), Gaps = 6/247 (2%) Strand = Plus / Plus Query: 334 aaatattatggaattagagaaatttatttacatgctttctcattccattcgcgaggagct 393 |||||||||||||||||||||||| || |||||||||| |||||||||||||| Sbjct: 755 aaatattatggaattagagaaattcg----cacactttctcatttaattcgcgaggagct 810 Query: 394 ggatgagaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaacc 453 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 811 ggatgagaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--acc 868 Query: 454 atcgactataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaagga 513 ||||||||||||| |||||||| |||||||| ||||||||||||||||||||||| ||| Sbjct: 869 gtcgactataacccaaaaagaactagatttcgtaaacaacatagaggaagaatgaaggga 928 Query: 514 aaatccttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaaccc 573 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 929 aaatcctgccgaggcaatcgtatttgttttggtagatatgctcttcaagtacttgaaccc 988 Query: 574 gcttgga 580 ||||||| Sbjct: 989 gcttgga 995 Score = 137 bits (69), Expect = 5e-29 Identities = 117/129 (90%), Gaps = 3/129 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| ||||||| |||| || |||||||||||||||| ||||| |||| ||||| Sbjct: 622 aaaaaattgctttatttgataagattctaaattaacaaataag-acagg-aaag-agtaa 678 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||| ||| Sbjct: 679 atattcgcccgcgaaatccttattggattagaatactttaccacgattcaataagaataa 738 Query: 124 aaataagga 132 ||||||||| Sbjct: 739 aaataagga 747
>gb|AY847075.1| Karroochloa purpurea ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1053 Score = 323 bits (163), Expect = 4e-85 Identities = 226/244 (92%), Gaps = 6/244 (2%) Strand = Plus / Plus Query: 337 tattatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctgga 396 |||||||||||| ||||||||| || ||||||||||| |||||||||||||||||| Sbjct: 795 tattatggaattcgagaaatttg----cacgctttctcatttcattcgcgaggagctgga 850 Query: 397 tgagaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatc 456 |||||||||||||||||||||||||||| ||||||||||||||||| |||| |||| ||| Sbjct: 851 tgagaagaaactctcatgtccagttttgcagtagagatggaactaa-aaag-gaactatc 908 Query: 457 gactataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaa 516 ||||||||||| |||||||| |||||||| ||||||||||||||||||||||| |||||| Sbjct: 909 gactataaccctaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaa 968 Query: 517 tccttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgct 576 |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 969 tcctgccgaggcaatcgtatttgttttggtagatatgctcttcaagtacttgaacccgct 1028 Query: 577 tgga 580 |||| Sbjct: 1029 tgga 1032 Score = 87.7 bits (44), Expect = 4e-14 Identities = 98/112 (87%), Gaps = 3/112 (2%) Strand = Plus / Plus Query: 15 ttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaaatattcgcccg 74 ||||||||||| ||||||||||||||||||| ||||| |||| |||||||||||||||| Sbjct: 614 ttatttggtaaaattataaattaacaaataag-acagg-aaag-agtaaatattcgcccg 670 Query: 75 cgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaa 126 |||||| |||||| ||| ||||||||||| ||||||||||| |||||| Sbjct: 671 cgaaatatttattggattcgaatactttactataattcaataagactaaaaa 722
>gb|AY847086.1| Danthoniopsis dinteri ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1152 Score = 321 bits (162), Expect = 1e-84 Identities = 267/301 (88%), Gaps = 11/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 |||||||||||||||||| |||| ||| ||||||||||||| ||||||| ||||| Sbjct: 842 cctaactttttctattatatattgatgtgtatctatccgta-----atattttggaatat 896 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 |||||||||||| ||||| || |||||||||| ||||||||||||||||||||| Sbjct: 897 tatggaattagacaaattcg----cacactttctcatttcattcgcgaggagctggatga 952 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 |||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||| Sbjct: 953 gaagaaactctcatgtcctgttttgcagtagagatggaactaagaaaga--accatcgac 1010 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 ||| ||||||||||||| |||||||| || |||||||||||||||||||| ||||||||| Sbjct: 1011 tatgaccccaaaagaactagatttcgtaaccaacatagaggaagaatgaagggaaaatcc 1070 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | ||||||||||||||| ||||||||||||||||| ||||||| |||||| ||||||||| Sbjct: 1071 taccgaggcaatcgtatatgttttggtagatatgcccttcaagtacttgagcccgcttgg 1130 Query: 580 a 580 | Sbjct: 1131 a 1131 Score = 121 bits (61), Expect = 3e-24 Identities = 116/129 (89%), Gaps = 4/129 (3%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| |||||||||||| ||||||||||||||||||| ||||| |||| ||||| Sbjct: 613 aaaaaattgctttatttggtaaggttataaattaacaaataag-acagg-aaag-agtaa 669 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| ||||| |||||||||||||| | ||||||||||||| ||| Sbjct: 670 atattcgcccgcgaaatctttattagattagaatacttta-cacgattcaataagaataa 728 Query: 124 aaataagga 132 ||||||||| Sbjct: 729 aaataagga 737 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 198 tggatatattctagatcttcttttttgactatatatt 234 ||||||||||||||||||| ||| || |||||||||| Sbjct: 779 tggatatattctagatcttttttctttactatatatt 815
>gb|AY912215.1| Temochloa liliana ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1149 Score = 321 bits (162), Expect = 1e-84 Identities = 232/254 (91%), Gaps = 6/254 (2%) Strand = Plus / Plus Query: 327 tatttttaaatattatggaattagagaaatttatttacatgctttctcattccattcgcg 386 |||||||| | || |||||||||||||||||| || ||||||| ||| |||||||| Sbjct: 867 tatttttataaataatggaattagagaaatttg----cacgctttcttatttcattcgcg 922 Query: 387 aggagctggatgagaagaaactctcatgtccagttttggagtagagatggaactaagaaa 446 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 923 aggagctggatgagaagaaactctcatgtccagttttgcagtagagatggaactaagaaa 982 Query: 447 gagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagaggaagaat 506 | |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 983 aa--accatcgactataaccccaaaagaactagatttcgtaaacaacatagaggaagaat 1040 Query: 507 gaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttcaagcact 566 ||| ||||||||| |||||||||| |||||||||||||||||||||||||||||| ||| Sbjct: 1041 gaagggaaaatccggccgaggcaattgtatttgttttggtagatatgctcttcaagtact 1100 Query: 567 tgaacccgcttgga 580 |||||||||||||| Sbjct: 1101 tgaacccgcttgga 1114 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataag 118 |||||||||||||||||||||| |||||| ||| |||||||||||| ||||| |||||| Sbjct: 672 agtaaatattcgcccgcgaaatctttattggatttgaatactttaccacgatttaataag 731 Query: 119 agtaaaaa 126 |||||||| Sbjct: 732 agtaaaaa 739 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataag 46 ||||||||| |||||||||||| ||||||||||||||||||| Sbjct: 612 aaaaaattgctttatttggtaaggttataaattaacaaataag 654
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 321 bits (162), Expect = 1e-84 Identities = 192/201 (95%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 380 attcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaac 439 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 23180875 attcgcgaggagctggatgagaagaaactctcatgtccagttttgcagtagagatggaac 23180934 Query: 440 taagaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 ||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 23180935 taaga--gagaaccatcgactaaaaccccaaaagaaccagatttcgtaaacaacatagag 23180992 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 23180993 gaagaatgaagggaaaatcctaccgaggcaattgtatttgttttggtagatatgctcttc 23181052 Query: 560 aagcacttgaacccgcttgga 580 |||||||||||||| |||||| Sbjct: 23181053 aagcacttgaacccacttgga 23181073 Score = 155 bits (78), Expect = 2e-34 Identities = 114/122 (93%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||| | |||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 23180543 aaaaaattgtcttattcgataaggttatgaattaacaaataag-acagg-aaag-agtaa 23180599 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 23180600 atattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataagagtaa 23180659 Query: 124 aa 125 || Sbjct: 23180660 aa 23180661 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 23180694 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 23180753 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 23180754 tgactatatatt 23180765 Score = 52.0 bits (26), Expect = 0.002 Identities = 52/61 (85%), Gaps = 5/61 (8%) Strand = Plus / Plus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| ||||||||||| ||||||||| |||||| |||||||||||||||| Sbjct: 23180808 ctattaatgtgtatctatccg-----taatattttagaatattgtggaattagagaaatt 23180862 Query: 358 t 358 | Sbjct: 23180863 t 23180863 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 324 taatatttttaaatattatgg 344 ||||||||||||||||||||| Sbjct: 17688007 taatatttttaaatattatgg 17687987
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 321 bits (162), Expect = 1e-84 Identities = 192/201 (95%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 380 attcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaac 439 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 131523 attcgcgaggagctggatgagaagaaactctcatgtccagttttgcagtagagatggaac 131582 Query: 440 taagaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 ||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 131583 taaga--gagaaccatcgactaaaaccccaaaagaaccagatttcgtaaacaacatagag 131640 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 131641 gaagaatgaagggaaaatcctaccgaggcaattgtatttgttttggtagatatgctcttc 131700 Query: 560 aagcacttgaacccgcttgga 580 |||||||||||||| |||||| Sbjct: 131701 aagcacttgaacccacttgga 131721 Score = 155 bits (78), Expect = 2e-34 Identities = 114/122 (93%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||| | |||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 131191 aaaaaattgtcttattcgataaggttatgaattaacaaataag-acagg-aaag-agtaa 131247 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 131248 atattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataagagtaa 131307 Query: 124 aa 125 || Sbjct: 131308 aa 131309 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 131342 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 131401 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 131402 tgactatatatt 131413 Score = 52.0 bits (26), Expect = 0.002 Identities = 52/61 (85%), Gaps = 5/61 (8%) Strand = Plus / Plus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| ||||||||||| ||||||||| |||||| |||||||||||||||| Sbjct: 131456 ctattaatgtgtatctatccg-----taatattttagaatattgtggaattagagaaatt 131510 Query: 358 t 358 | Sbjct: 131511 t 131511
>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0642B07 Length = 139297 Score = 321 bits (162), Expect = 1e-84 Identities = 192/201 (95%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 380 attcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaac 439 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 15637 attcgcgaggagctggatgagaagaaactctcatgtccagttttgcagtagagatggaac 15696 Query: 440 taagaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 ||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 15697 taaga--gagaaccatcgactaaaaccccaaaagaaccagatttcgtaaacaacatagag 15754 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 15755 gaagaatgaagggaaaatcctaccgaggcaattgtatttgttttggtagatatgctcttc 15814 Query: 560 aagcacttgaacccgcttgga 580 |||||||||||||| |||||| Sbjct: 15815 aagcacttgaacccacttgga 15835 Score = 155 bits (78), Expect = 2e-34 Identities = 114/122 (93%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||| | |||| |||| |||||||||||||| ||||| |||| ||||| Sbjct: 15305 aaaaaattgtcttattcgataaggttatgaattaacaaataag-acagg-aaag-agtaa 15361 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 15362 atattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataagagtaa 15421 Query: 124 aa 125 || Sbjct: 15422 aa 15423 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 15456 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 15515 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 15516 tgactatatatt 15527 Score = 52.0 bits (26), Expect = 0.002 Identities = 52/61 (85%), Gaps = 5/61 (8%) Strand = Plus / Plus Query: 298 ctattaatgngtatctatccgtaccgtaatatttttaaatattatggaattagagaaatt 357 ||||||||| ||||||||| ||||||||||| |||||| |||||||||||||||| Sbjct: 15570 ctattaatgtgtatctatc-----cgtaatattttagaatattgtggaattagagaaatt 15624 Query: 358 t 358 | Sbjct: 15625 t 15625
>gb|AY847078.1| Eragrostis curvula ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1163 Score = 319 bits (161), Expect = 6e-84 Identities = 236/260 (90%), Gaps = 6/260 (2%) Strand = Plus / Plus Query: 321 ccgtaatatttttaaatattatggaattagagaaatttatttacatgctttctcattcca 380 |||||||||||||||||||||||||||||||||||||| || ||||||||||| || Sbjct: 889 ccgtaatatttttaaatattatggaattagagaaatttg----cacgctttctcatttca 944 Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 945 ttcgcgaggagctggatgagaagaaactctcatgtccagttttgtagtagagatggaact 1004 Query: 441 aagaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagagg 500 | ||| ||||||||||||||||||||||||||| | |||||||| || |||||||| Sbjct: 1005 a--aaaaagaaccatcgactataaccccaaaagacctagatttcgtaactttcatagagg 1062 Query: 501 aagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttca 560 ||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 1063 aagaatgaagggaaaatcctgccgaggcaatcgtatttgttttggtagatatgcttttca 1122 Query: 561 agcacttgaacccgcttgga 580 || |||| |||||| ||||| Sbjct: 1123 agtacttcaacccgnttgga 1142 Score = 121 bits (61), Expect = 3e-24 Identities = 118/133 (88%), Gaps = 3/133 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| ||||||| |||| ||||||||||||||||||| ||| | |||| ||||| Sbjct: 626 aaaaaattgctttatttgttaaggttataaattaacaaataag-acaag-aaag-agtaa 682 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| ||||||| ||| ||||||||||| ||||||||||| |||| Sbjct: 683 atattcgcccgcgaaatccttattggattcgaatactttactatgattcaataagggtaa 742 Query: 124 aaataaggatatt 136 ||||||||||||| Sbjct: 743 aaataaggatatt 755 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 198 tggatatattctagatcttcttttttgactatatatt 234 ||||||||||||||||||| ||| ||||||||||||| Sbjct: 795 tggatatattctagatcttttttcttgactatatatt 831
>gb|AF133480.1|AF133480 Zoysia matrella ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1204 Score = 319 bits (161), Expect = 6e-84 Identities = 261/292 (89%), Gaps = 12/292 (4%) Strand = Plus / Plus Query: 289 ttctattatctattaatgngtatctatccgtaccgtaatatttttaaatattatggaatt 348 ||||||||| |||| ||| ||||||||||||| ||||||| ||||||||| |||| Sbjct: 904 ttctattatatattgatgtgtatctatccgta-----atattttggaatattatgaaatt 958 Query: 349 agagaaatttatttacatgctttctcattccattcgcgaggagctggatgagaagaaact 408 || |||||| || ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 959 cgaaaaatttg----cacgctttctcatttcattcgcgaggagctggatgagaagaaact 1014 Query: 409 ctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgactataacccc 468 |||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 1015 ctcatgtccagttttgcagtagagatggaacta--aaaaagaaccatcgactataacccc 1072 Query: 469 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 528 |||||||| |||||||| |||||||||||| |||||||||| | |||||||| ||||||| Sbjct: 1073 aaaagaactagatttcgtaaacaacataga-gaagaatgaaggtaaaatcctgccgaggc 1131 Query: 529 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1132 aatcgtatttgttttggtagatatgctcttcaagtacttgaacccgcttgga 1183 Score = 89.7 bits (45), Expect = 1e-14 Identities = 115/133 (86%), Gaps = 4/133 (3%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| |||||||||||| ||||||||||||||||||| ||| | |||| ||||| Sbjct: 658 aaaaaattgctttatttggtaaggttataaattaacaaataag-acaag-aaag-agtaa 714 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| |||||| ||||||||| ||||| ||| || || |||| | Sbjct: 715 atattcgcccgcgaaatctttattggattagaatagtttactatgatcca-taggagtca 773 Query: 124 aaataaggatatt 136 ||||||||||||| Sbjct: 774 aaataaggatatt 786 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 201 atatattctagatcttcttttttgactatatatt 234 |||||||| ||||||||||| || |||||||||| Sbjct: 839 atatattccagatcttctttctttactatatatt 872
>gb|AY847100.1| Chasmanthium sessiliflorum ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1142 Score = 315 bits (159), Expect = 9e-83 Identities = 267/301 (88%), Gaps = 12/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 |||||||||||||||||| |||| || ||||||||||||| |||||||| ||||| Sbjct: 833 cctaactttttctattatatattgatatgtatctatccgta-----atatttttgaatat 887 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 |||||||||||||||||| || ||||||||||| |||| ||||||||||||||| Sbjct: 888 tatggaattagagaaattcg----cacgctttctcatttcattt-cgaggagctggatga 942 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| |||||||||||| |||||||||| ||| ||||| Sbjct: 943 gaagaaactctcatgtccagttttgcagtagagatggacctaagaaaga--accgtcgac 1000 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 ||||||||||||||||| |||||||| || || ||||||||||||||||| ||||||||| Sbjct: 1001 tataaccccaaaagaactagatttcgtaancatcatagaggaagaatgaagggaaaatcc 1060 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | || |||||||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 1061 tgccaaggcaatcgtatttgttttggtagatatgctcttcaagtacttgagcccgcttgg 1120 Query: 580 a 580 | Sbjct: 1121 a 1121 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/81 (91%), Gaps = 3/81 (3%) Strand = Plus / Plus Query: 15 ttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaaatattcgcccg 74 |||||||||||| ||||||||||||||||||| ||||| |||| |||||||||||||||| Sbjct: 612 ttatttggtaaggttataaattaacaaataag-acagg-aaag-agtaaatattcgcccg 668 Query: 75 cgaaattcttattgaattaga 95 |||||| |||||| |||||| Sbjct: 669 cgaaatctttattggattaga 689 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 198 tggatatattctagatcttcttttttgactat 229 ||||||||||||||||||||||| |||||||| Sbjct: 764 tggatatattctagatcttctttcttgactat 795
>gb|AY847095.1| Megastachya mucronata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1154 Score = 315 bits (159), Expect = 9e-83 Identities = 264/298 (88%), Gaps = 11/298 (3%) Strand = Plus / Plus Query: 283 aactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatattat 342 ||||||||||||| | |||| ||| ||||||||||||| ||||| |||||||| Sbjct: 847 aactttttctattctatattgatgtgtatctatccgta-----atattcaaaaatattac 901 Query: 343 ggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatgagaa 402 ||||||||||||||| | || ||||| ||||| |||||| ||||||||||||||||| Sbjct: 902 ggaattagagaaattga----cacgctttatcatttcattcgtgaggagctggatgagaa 957 Query: 403 gaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgactat 462 |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 958 gaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgactat 1015 Query: 463 aaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttc 522 |||||||||||||| ||||||| || |||||||||||||||||||| |||||||||| | Sbjct: 1016 aaccccaaaagaactcgatttcgtaaccaacatagaggaagaatgaagggaaaatcctgc 1075 Query: 523 cgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 1076 cgaggcaatcgtatctgttttggtagatacgctcttcaagtacttgaacccgcttgga 1133 Score = 121 bits (61), Expect = 3e-24 Identities = 116/129 (89%), Gaps = 4/129 (3%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||| |||||||||||| || |||||||||||||||| ||||| |||| ||||| Sbjct: 624 aaaaaattgttttatttggtaaggttttaaattaacaaataag-acagg-aaag-agtaa 680 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| |||||| |||||||||||||| | ||||||||||||| ||| Sbjct: 681 atattcgcccgcgaaatctttattggattagaatacttta-cacgattcaataagaataa 739 Query: 124 aaataagga 132 ||| ||||| Sbjct: 740 aaaaaagga 748 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 198 tggatatattctagatcttcttttttgactat 229 |||||||||||| |||||||||| |||||||| Sbjct: 788 tggatatattctggatcttctttcttgactat 819
>gb|AY847076.1| Aristida purpurea var. curvifolia ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1112 Score = 313 bits (158), Expect = 4e-82 Identities = 266/301 (88%), Gaps = 11/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 |||||||||||||||||| |||| ||| |||| ||||| || ||||||||| | || Sbjct: 802 cctaactttttctattatatattgatgtgtatttatccata-----atatttttataaat 856 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 |||||||||||||||||| || ||||||| ||| ||||||||||||||||||||| Sbjct: 857 aatggaattagagaaatttg----cacgctttcttatttcattcgcgaggagctggatga 912 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||| Sbjct: 913 gaagaaactctcatgtccagttttgcagtagagatggaactaagaaaaa--accatcgac 970 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 ||||||||||||||||| | |||||| |||||||||| |||||||||||| ||||||||| Sbjct: 971 tataaccccaaaagaactaaatttcgtaaacaacataaaggaagaatgaagggaaaatcc 1030 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 |||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 1031 ggccgaggcaattgtatttgttttggtaaatatgctcttcaagtacttgaacccgcttgg 1090 Query: 580 a 580 | Sbjct: 1091 a 1091 Score = 95.6 bits (48), Expect = 2e-16 Identities = 108/123 (87%), Gaps = 4/123 (3%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| |||||||||||| ||||||||||||||||||| ||| | |||| ||||| Sbjct: 607 aaaaaattgctttatttggtaaggttataaattaacaaataag-aca-gtaaag-agtaa 663 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||| ||||||||||| |||||| ||| |||||||||| | ||||| ||||||||||| Sbjct: 664 atatttgcccgcgaaatctttattggatttgaatacttta-cacgatttaataagagtaa 722 Query: 124 aaa 126 ||| Sbjct: 723 aaa 725
>gb|AF133481.1|AF133481 Chloris distichophylla ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1180 Score = 311 bits (157), Expect = 1e-81 Identities = 190/200 (95%), Gaps = 2/200 (1%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 962 ttcgcgaggagctggatgagaagaaactctcatgtccagttttgcagtagagatggaact 1021 Query: 441 aagaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagagg 500 || ||| | |||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 1022 aaaaaaaa--accatcgactataaccccaaaagaactagatttcgtaaacaacatagagg 1079 Query: 501 aagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttca 560 ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1080 aagaatgaagggaaaatcctgccgaggcaatcgtatttgttttggtagatatgctcttca 1139 Query: 561 agcacttgaacccgcttgga 580 || ||||||||||||||||| Sbjct: 1140 agtacttgaacccgcttgga 1159 Score = 115 bits (58), Expect = 2e-22 Identities = 109/122 (89%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 |||||||||||||||||| |||| ||||||||||||||||||| ||| | |||| ||||| Sbjct: 648 aaaaaattgtcttatttgataaggttataaattaacaaataag-acaag-aaag-agtaa 704 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| |||||| ||||||||||||||| ||||||||||| |||| Sbjct: 705 atattcgcccgcgaaatctttattggattagaatactttactatgattcaataagggtaa 764 Query: 124 aa 125 || Sbjct: 765 aa 766 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 323 gtaatatttttaaatattatggaattagagaaattt 358 ||||||||||| |||||||||||||||||||||||| Sbjct: 922 gtaatatttttgaatattatggaattagagaaattt 957 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 198 tggatatattctagatcttcttttttgactatatatt 234 ||||||||||||||||||||||| || |||||||||| Sbjct: 820 tggatatattctagatcttctttctttactatatatt 856
>gb|AY847111.1| Zeugites sagittatus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1018 Score = 309 bits (156), Expect = 5e-81 Identities = 200/214 (93%), Gaps = 2/214 (0%) Strand = Plus / Plus Query: 367 gctttctcattccattcgcgaggagctggatgagaagaaactctcatgtccagttttgga 426 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 786 gctttcttatttcattcgcgaggagctggatgagaagaaactctcatgtccagttttgca 845 Query: 427 gtagagatggaactaagaaagagaaccatcgactataaccccaaaagaaccagatttcgc 486 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 846 gtagagatggaactaagaaaga--accatcgactataaccccaaaagaactagatttcgt 903 Query: 487 aaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggt 546 |||| ||||| |||||||||||| || ||||||| ||||||||||||||||||||||||| Sbjct: 904 aaaccacatanaggaagaatgaagggcaaatcctgccgaggcaatcgtatttgttttggt 963 Query: 547 agatatgctcttcaagcacttgaacccgcttgga 580 | |||||||||||||| ||||||||||||||||| Sbjct: 964 acatatgctcttcaagtacttgaacccgcttgga 997 Score = 69.9 bits (35), Expect = 9e-09 Identities = 83/95 (87%), Gaps = 3/95 (3%) Strand = Plus / Plus Query: 1 accaaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnag 60 |||||||||| | |||||||||||| |||||||||| |||||||| ||||| |||| || Sbjct: 568 accaaaaaatggctttatttggtaaggttataaattaccaaataag-acagg-aaag-ag 624 Query: 61 taaatattcgcccgcgaaattcttattgaattaga 95 |||| ||||||||||||||| |||||| |||||| Sbjct: 625 taaacattcgcccgcgaaatctttattggattaga 659
>gb|AY847110.1| Zeugites pringlei ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1060 Score = 309 bits (156), Expect = 5e-81 Identities = 220/240 (91%), Gaps = 6/240 (2%) Strand = Plus / Plus Query: 341 atggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatgag 400 ||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||| Sbjct: 806 atggaattagagaaattaat----atgctttcttatttcattcgcgaggagctggatgag 861 Query: 401 aagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgact 460 |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 862 aagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgact 919 Query: 461 ataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcct 520 |||||||||||||||| ||||||| ||||||||||||||||||||||| || ||||| Sbjct: 920 ataaccccaaaagaactcgatttcgtaaacaacatagaggaagaatgaaggggaaatctc 979 Query: 521 tccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 | |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 980 tgcgaggcaatcgtatttgttttggtagatatgctcttcaagtacttgagcccgcttgga 1039 Score = 60.0 bits (30), Expect = 8e-06 Identities = 71/81 (87%), Gaps = 3/81 (3%) Strand = Plus / Plus Query: 15 ttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaaatattcgcccg 74 |||||||||||| || |||||||||||||||| |||| |||| |||||| ||||||||| Sbjct: 630 ttatttggtaagattttaaattaacaaataagg-cagg-aaag-agtaaacattcgcccg 686 Query: 75 cgaaattcttattgaattaga 95 |||||| |||||| |||||| Sbjct: 687 cgaaatctttattggattaga 707
>gb|AY847109.1| Zeugites munroanus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 952 Score = 309 bits (156), Expect = 5e-81 Identities = 220/240 (91%), Gaps = 6/240 (2%) Strand = Plus / Plus Query: 341 atggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatgag 400 ||||||||||||||||| || ||||||||| ||| ||||||||||||||||||||| Sbjct: 698 atggaattagagaaattaat----atgctttcttatttcattcgcgaggagctggatgaa 753 Query: 401 aagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgact 460 || ||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| Sbjct: 754 aataaactctcatgtccagttttgcagtaaagatggaactaagaaaga--accatcgact 811 Query: 461 ataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcct 520 |||||||||||||||| |||||||| ||||||||||||||||||||||| || ||||||| Sbjct: 812 ataaccccaaaagaactagatttcgtaaacaacatagaggaagaatgaaggggaaatcct 871 Query: 521 tccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 872 gccgaggcaatcgtatttgttttggtatatatgctcttcaagtacttgaacccgcttgga 931 Score = 60.0 bits (30), Expect = 8e-06 Identities = 71/81 (87%), Gaps = 3/81 (3%) Strand = Plus / Plus Query: 15 ttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaaatattcgcccg 74 |||||||||||| ||||||||||||||||||| |||| |||| |||||| |||| |||| Sbjct: 516 ttatttggtaaggttataaattaacaaataagg-cagg-aaag-agtaaacattcccccg 572 Query: 75 cgaaattcttattgaattaga 95 |||||| |||||| |||||| Sbjct: 573 cgaaatctttattggattaga 593
>gb|AY847108.1| Zeugites mexicanus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1056 Score = 309 bits (156), Expect = 5e-81 Identities = 220/240 (91%), Gaps = 6/240 (2%) Strand = Plus / Plus Query: 341 atggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatgag 400 ||||||||||||||||| || ||||||||| ||| |||| ||||||||||||||||| Sbjct: 802 atggaattagagaaattaat----atgctttcttatttcatttgcgaggagctggatgag 857 Query: 401 aagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgact 460 |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 858 aagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatcgact 915 Query: 461 ataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcct 520 |||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 916 ataaccccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcct 975 Query: 521 tccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgga 580 |||||||| |||||||||| |||||||||||||||||| || |||||| |||||||||| Sbjct: 976 gccgaggcagtcgtatttgtattggtagatatgctcttcgagtacttgaccccgcttgga 1035 Score = 67.9 bits (34), Expect = 3e-08 Identities = 72/81 (88%), Gaps = 3/81 (3%) Strand = Plus / Plus Query: 15 ttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaaatattcgcccg 74 |||||||||||| ||||||||||||||||||| |||| |||| |||||| ||||||||| Sbjct: 626 ttatttggtaaggttataaattaacaaataagg-cagg-aaag-agtaaacattcgcccg 682 Query: 75 cgaaattcttattgaattaga 95 |||||| |||||| |||||| Sbjct: 683 cgaaatctttattggattaga 703
>gb|AY847103.1| Pohlidium petiolatum rpl16 gene, intron; chloroplast Length = 1018 Score = 309 bits (156), Expect = 5e-81 Identities = 224/244 (91%), Gaps = 7/244 (2%) Strand = Plus / Plus Query: 337 tattatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctgga 396 ||||||||||||||||||||| || ||||||| ||| ||||||||||||||||| Sbjct: 761 tattatggaattagagaaattcg----cacgctttcttatttgattcgcgaggagctgga 816 Query: 397 tgagaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatc 456 |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 817 tgagaagaaactctcatgtccagttttgcagtagagatggaactaagaaaga--accatc 874 Query: 457 gactataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaa 516 |||||||||||||||||||| |||||||| ||||||||||||||||||||||| || ||| Sbjct: 875 gactataaccccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggcaaa 934 Query: 517 tccttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgct 576 |||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||| Sbjct: 935 tcctgccgaggcaatcgta-ttgttttggtagatatgctcttcaagtacttgaacccgct 993 Query: 577 tgga 580 |||| Sbjct: 994 tgga 997 Score = 69.9 bits (35), Expect = 9e-09 Identities = 71/81 (87%), Gaps = 3/81 (3%) Strand = Plus / Plus Query: 15 ttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaaatattcgcccg 74 |||||||||||| ||||||||||||||||||| ||||| || | ||||| ||||||||| Sbjct: 586 ttatttggtaaggttataaattaacaaataag-acaggaaagg--gtaaacattcgcccg 642 Query: 75 cgaaattcttattgaattaga 95 |||||| |||||| |||||| Sbjct: 643 cgaaatctttattggattaga 663
>gb|AY912198.1| Guadua angustifolia ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1079 Score = 297 bits (150), Expect = 2e-77 Identities = 207/225 (92%), Gaps = 11/225 (4%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||||||||||||||| | ||||||||||| |||||||| ||||| Sbjct: 755 cctaactttttctattatctattaatgtgcatctatccgta-----atatttttgaatat 809 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 810 tatggaattagagaaatttg----catgctttctcatttcattcgcgaggagctggatga 865 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 866 gaagaaactctcatgtccagttttgcagtagagatggaactaagaa--agaaccatcgac 923 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaaga 504 |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 924 tataaccccaaaagaaccagatttcgtaaacaacatagaggaaga 968 Score = 190 bits (96), Expect = 3e-45 Identities = 163/185 (88%), Gaps = 14/185 (7%) Strand = Plus / Plus Query: 85 attgaattagaatactttaccgcgattcaataagagtaaaaataaggatatttttt---- 140 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 562 attgaattagaatactttaccgcgattcaataagagtaaaaataaggagatttttttttt 621 Query: 141 --agaaggactacattattatctataaatatagaatttagataaatatccacacacatct 198 ||||||| |||||||| ||||||||||||||| |||||||||| ||||||||||| Sbjct: 622 taagaaggattacattat---ctataaatatagaatatagataaatagacacacacatct 678 Query: 199 ggatatattctagatcttcttttttgactatatattatatttttctgttttaacaaattc 258 ||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||| Sbjct: 679 agatatattctagatcttctttcttgacta-----tatatttttctattttaacaaattc 733 Query: 259 aatat 263 ||||| Sbjct: 734 aatat 738
>gb|AY912196.1| Neurolepis aristata ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1206 Score = 295 bits (149), Expect = 8e-77 Identities = 269/306 (87%), Gaps = 14/306 (4%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||||||||||||||| | |||||||| |||||||||| ||||| Sbjct: 874 cctaactttttctattatctattaatgtgcatctatcc-----gtaatattttggaatat 928 Query: 340 tat-----ggaattagagaa-atttatttacatgctttctcattccattcgcgaggagct 393 ||| |||||||||| | | |||| || ||||||||||| ||||||||||||||| Sbjct: 929 tatattatggaattagagtagagaaatttgcacgctttctcatttcattcgcgaggagct 988 Query: 394 ggatgagaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaacc 453 ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| || Sbjct: 989 ggatgagaagaaactctcatgtccagttttgcagtagagatggacctaagaaagag--cc 1046 Query: 454 atcgactataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaagga 513 ||||||||| |||||||||| |||||||||| ||||| ||||||||||||||||| ||| Sbjct: 1047 atcgactatgtccccaaaaganccagatttcgtaaacatcatagaggaagaatgaaggga 1106 Query: 514 aaatccttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaaccc 573 || |||| |||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 1107 aacacctt-cgaggcaatcgtatttgttttggtagatatgctcttcaagaacttgacccc 1165 Query: 574 gcttgg 579 |||||| Sbjct: 1166 gcttgg 1171 Score = 107 bits (54), Expect = 4e-20 Identities = 112/130 (86%), Gaps = 6/130 (4%) Strand = Plus / Plus Query: 108 gattcaataagagtaaaaataaggatatttttt---agaaggactacattattatctata 164 ||||||||||||||||||||||||| ||||||| |||| || |||||||| ||||| Sbjct: 709 gattcaataagagtaaaaataaggagatttttttttagaaagattacattat---ctata 765 Query: 165 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 224 |||||| ||| ||||||||| ||| | ||||| ||||||||||||||||||||| ||| Sbjct: 766 aatatataatccagataaatagacactcgcatctagatatattctagatcttctttcttg 825 Query: 225 actatatatt 234 |||||||||| Sbjct: 826 actatatatt 835 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataa 33 ||||||||| ||||||||||||| |||||| Sbjct: 626 aaaaaattgccttatttggtaaggttataa 655
>gb|AF133491.1|AF133491 Joinvillea ascendens ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1229 Score = 295 bits (149), Expect = 8e-77 Identities = 194/208 (93%), Gaps = 2/208 (0%) Strand = Plus / Plus Query: 373 tcattccattcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagag 432 ||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 1003 tcatttcattcgcgaggagctggatgagaagaaactctcatgtccggttttgcagtagag 1062 Query: 433 atggaactaagaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaa 492 |||||| ||||||||| |||||||||||||||||||||||||| |||||||| |||||| Sbjct: 1063 atggaattaagaaaga--accatcgactataaccccaaaagaactagatttcgtaaacaa 1120 Query: 493 catagaggaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatat 552 ||||||||||||||||| |||| |||| ||||||||||| ||||||||||||||||||| Sbjct: 1121 catagaggaagaatgaagggaatgtcctgccgaggcaatcatatttgttttggtagatat 1180 Query: 553 gctcttcaagcacttgaacccgcttgga 580 ||||||||||||||||||||| |||||| Sbjct: 1181 gctcttcaagcacttgaacccacttgga 1208 Score = 79.8 bits (40), Expect = 9e-12 Identities = 107/125 (85%), Gaps = 7/125 (5%) Strand = Plus / Plus Query: 6 aaaattgtcttatttggtaagtttataaattaa----caaataagnacaggnaaagnagt 61 ||||||||||||||||||||| |||| |||| | | |||||| ||||| |||| ||| Sbjct: 636 aaaattgtcttatttggtaaggttatgaattgaacctcgaataag-acagg-aaag-agt 692 Query: 62 aaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagt 121 ||||||||||||||||||| |||||| |||| |||| ||| ||||||||| |||||||| Sbjct: 693 aaatattcgcccgcgaaatctttattggattacaatattttgccgcgattcgataagagt 752 Query: 122 aaaaa 126 ||||| Sbjct: 753 aaaaa 757 Score = 52.0 bits (26), Expect = 0.002 Identities = 34/37 (91%) Strand = Plus / Plus Query: 284 actttttctattatctattaatgngtatctatccgta 320 ||||||| ||||||||||||||| ||||| ||||||| Sbjct: 919 actttttgtattatctattaatgtgtatccatccgta 955
>gb|AF133489.1|AF133489 Anomochloa marantoidea ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1222 Score = 291 bits (147), Expect = 1e-75 Identities = 198/214 (92%), Gaps = 2/214 (0%) Strand = Plus / Plus Query: 367 gctttctcattccattcgcgaggagctggatgagaagaaactctcatgtccagttttgga 426 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 990 gctttctcatttcattcgcgaggagctggatgagaagaaactctcatgtccagttttgca 1049 Query: 427 gtagagatggaactaagaaagagaaccatcgactataaccccaaaagaaccagatttcgc 486 ||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||| Sbjct: 1050 atagagatggaattaagaaaga--accatcgactataaccccaaaagaactcgatttcgt 1107 Query: 487 aaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggt 546 ||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||| Sbjct: 1108 aaacaacatagaggaagaatgaagggaaaatcctgccggggcaatcgtatttgttttggc 1167 Query: 547 agatatgctcttcaagcacttgaacccgcttgga 580 ||||| ||||||||||| ||||||||| |||||| Sbjct: 1168 agatacgctcttcaagcgcttgaacccacttgga 1201 Score = 56.0 bits (28), Expect = 1e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 287 ttttctattatctattaatgngtatctatccgtac 321 |||| ||||||||||||||| |||||||||||||| Sbjct: 919 ttttgtattatctattaatgtgtatctatccgtac 953 Score = 46.1 bits (23), Expect = 0.13 Identities = 69/83 (83%), Gaps = 1/83 (1%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaattcttatt-gaattagaatactttaccgcgattcaataa 117 |||||||||||||||||||||| ||||| | | | |||||||| || |||||||||| Sbjct: 700 agtaaatattcgcccgcgaaatctttattatagtaacaatactttcccatgattcaataa 759 Query: 118 gagtaaaaataaggatatttttt 140 || |||||| || || ||||||| Sbjct: 760 gaataaaaagaaagagatttttt 782 Score = 44.1 bits (22), Expect = 0.50 Identities = 46/53 (86%), Gaps = 2/53 (3%) Strand = Plus / Plus Query: 177 agataaatatccacacacatctggatatattctagatcttcttttttgactat 229 |||||||||| |||||| ||| ||||||||||| |||||||| |||||||| Sbjct: 826 agataaatat--acacacgtctagatatattctatctcttctttcttgactat 876
>gb|AY847089.1| Tristachya biseriata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1150 Score = 283 bits (143), Expect = 3e-73 Identities = 262/301 (87%), Gaps = 11/301 (3%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 |||||||||||||| ||| |||| ||| ||||||||||||| ||||||| ||||| Sbjct: 841 cctaactttttctaatatatattgatgtgtatctatccgta-----atattttggaatat 895 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 |||||||||||| ||||| || |||||||||| ||||||||||||||||||||| Sbjct: 896 tatggaattagacaaattcg----cacactttctcatttcattcgcgaggagctggatga 951 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| |||| |||||||||||| ||||| ||||||||| Sbjct: 952 gaagaaactctcatgtccagttttgcagtaaagatggaactaaaaaaga--accatcgac 1009 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 ||| ||||| ||||||| |||||||| |||| ||||| |||||||||||| ||||||||| Sbjct: 1010 tatnacccccaaagaactagatttcgtaaaccacataaaggaagaatgaagggaaaatcc 1069 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgg 579 | ||||||||||||||| | ||||||||||||||| ||||| | |||||||||||||||| Sbjct: 1070 taccgaggcaatcgtatattttttggtagatatgcccttcaggtacttgaacccgcttgg 1129 Query: 580 a 580 | Sbjct: 1130 a 1130 Score = 111 bits (56), Expect = 3e-21 Identities = 112/129 (86%), Gaps = 3/129 (2%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||| |||||||||||| ||||||||||||||||||| || | ||| ||||| Sbjct: 611 aaaaaattgctttatttggtaaggttataaattaacaaataag-acng--aaaagagtaa 667 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||| ||||||| |||||| |||||||||||||| | ||||||||||| | ||| Sbjct: 668 atattcgcctgcgaaatctttattggattagaatactttatcacgattcaataaaaataa 727 Query: 124 aaataagga 132 ||||||||| Sbjct: 728 aaataagga 736 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 198 tggatatattctagatcttcttttttgactatatatt 234 ||||||||||||||||||||||| ||||||||||||| Sbjct: 778 tggatatattctagatcttctttcttgactatatatt 814
>gb|AY912203.1| Decaryochloa diadelpha ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1173 Score = 272 bits (137), Expect = 1e-69 Identities = 249/285 (87%), Gaps = 13/285 (4%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||||||||||||||| | ||||||||||| ||||||| ||||| Sbjct: 900 cctaactttttctattatctattaatgtgcatctatccgta-----atattttggaatat 954 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 955 tatggaattagagaaatttg----cacgctttctcatttcattcgcgaggagctggatga 1010 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| | Sbjct: 1011 gaagaaactctcatgtccagttttgcagtagagatggaactaagaa--agaaccatcgcc 1068 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcc 519 ||||||||| || | || |||||| | || ||||||||||||||| | || ||| | Sbjct: 1069 tataacccccaagg--cccgatttcngtatcagcatagaggaagaatgnaggggaaaggc 1126 Query: 520 ttccgaggcaatcgtatttgttttggtagatatgctcttcaagca 564 | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1127 tgccgaggcaatcgtatttgttttggtagatatgctcttcaagca 1171 Score = 202 bits (102), Expect = 9e-49 Identities = 228/265 (86%), Gaps = 20/265 (7%) Strand = Plus / Plus Query: 8 aattgtcttatttggtaagtttataa-----attaacaaataagnacaggnaaagnagta 62 ||||| ||||||||||||| |||||| ||||||||||||| ||||| |||| ||| Sbjct: 630 aattgccttatttggtaaggttataataaaaattaacaaataag-acagg-aaag-agtc 686 Query: 63 aatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagta 122 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 687 aatattcgcccgcgaaatctttattgaattagaatactttaccgcgattcaataagagta 746 Query: 123 aaaataaggatatttttt----agaaggactacattattatctataaatatagaatttag 178 |||||||||| ||||||| |||| || ||| |||||||||||||||||||| ||| Sbjct: 747 aaaataaggagattttttgttaagaaagattac---attatctataaatatagaatatag 803 Query: 179 ataaatatccacacacatctggatatattctagatcttcttttttgactatatattatat 238 ||||||| ||||||||||| |||||||||| |||||||||| || |||| ||||| Sbjct: 804 ataaatagacacacacatctagatatattctggatcttctttctttacta-----tatat 858 Query: 239 ttttctgttttaacaaattcaatat 263 || ||| |||||||||||||||||| Sbjct: 859 ttatctattttaacaaattcaatat 883
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 270 bits (136), Expect = 5e-69 Identities = 231/260 (88%), Gaps = 7/260 (2%) Strand = Plus / Plus Query: 321 ccgtaatatttttaaatattatggaattagagaaatttatttacatgctttctcattcca 380 |||||||||||| |||||| | ||||||||||||||| || |||||||||| | Sbjct: 24916058 ccgtaatattttagaatattttcgaattagagaaatttg----cacactttctcatttga 24916113 Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 24916114 ttcgtgaggagctggatgagaagaaactctcatgtccagttttgcagtagagatggaact 24916173 Query: 441 aagaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagagg 500 |||| ||||| ||||||||||||||| ||||| ||||||||||| ||| |||||||||| Sbjct: 24916174 aaga--gagaatcatcgactataaccctaaaaggaccagatttcgtaaataacatagagg 24916231 Query: 501 aagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttca 560 || |||||| |||||||||| |||||||||| |||||||||||| ||||||||||||||| Sbjct: 24916232 aataatgaagggaaaatcctaccgaggcaattgtatttgttttgatagatatgctcttca 24916291 Query: 561 agcacttgaacccgcttgga 580 ||||||| ||||| |||||| Sbjct: 24916292 agcactt-aacccacttgga 24916310 Score = 95.6 bits (48), Expect = 2e-16 Identities = 66/72 (91%) Strand = Plus / Plus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||||||||| | Sbjct: 24915926 taaatatagaatatagataaataaacatacacatctagatatattctagatcttctttct 24915985 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 24915986 tgactatatatt 24915997 Score = 54.0 bits (27), Expect = 5e-04 Identities = 40/43 (93%), Gaps = 1/43 (2%) Strand = Plus / Plus Query: 83 ttattgaattagaatactttaccgcgattcaataagagtaaaa 125 |||||||||||||| |||||||| ||||| ||||||||||||| Sbjct: 24915853 ttattgaattagaa-actttaccacgatttaataagagtaaaa 24915894
>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1215B07 Length = 165957 Score = 270 bits (136), Expect = 5e-69 Identities = 231/260 (88%), Gaps = 7/260 (2%) Strand = Plus / Plus Query: 321 ccgtaatatttttaaatattatggaattagagaaatttatttacatgctttctcattcca 380 |||||||||||| |||||| | ||||||||||||||| || |||||||||| | Sbjct: 77341 ccgtaatattttagaatattttcgaattagagaaatttg----cacactttctcatttga 77396 Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 77397 ttcgtgaggagctggatgagaagaaactctcatgtccagttttgcagtagagatggaact 77456 Query: 441 aagaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagagg 500 |||| ||||| ||||||||||||||| ||||| ||||||||||| ||| |||||||||| Sbjct: 77457 aaga--gagaatcatcgactataaccctaaaaggaccagatttcgtaaataacatagagg 77514 Query: 501 aagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttca 560 || |||||| |||||||||| |||||||||| |||||||||||| ||||||||||||||| Sbjct: 77515 aataatgaagggaaaatcctaccgaggcaattgtatttgttttgatagatatgctcttca 77574 Query: 561 agcacttgaacccgcttgga 580 ||||||| ||||| |||||| Sbjct: 77575 agcactt-aacccacttgga 77593 Score = 95.6 bits (48), Expect = 2e-16 Identities = 66/72 (91%) Strand = Plus / Plus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || |||||||| ||||||||||||||||||||| | Sbjct: 77209 taaatatagaatatagataaataaacatacacatctagatatattctagatcttctttct 77268 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 77269 tgactatatatt 77280 Score = 54.0 bits (27), Expect = 5e-04 Identities = 40/43 (93%), Gaps = 1/43 (2%) Strand = Plus / Plus Query: 83 ttattgaattagaatactttaccgcgattcaataagagtaaaa 125 |||||||||||||| |||||||| ||||| ||||||||||||| Sbjct: 77136 ttattgaattagaa-actttaccacgatttaataagagtaaaa 77177
>gb|AY912206.1| Hickelia madagascariensis ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1108 Score = 268 bits (135), Expect = 2e-68 Identities = 201/222 (90%), Gaps = 11/222 (4%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 ||||||||||||||||||||||||||| | ||||||||||| ||||||| ||||| Sbjct: 898 cctaactttttctattatctattaatgtgcatctatccgta-----atattttggaatat 952 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 ||||||||||||||||||| | ||||||||||| ||||||||||||||||||||| Sbjct: 953 tatggaattagagaaatttg----cccgctttctcatttcattcgcgaggagctggatga 1008 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 1009 gaagaaactctcatgtccagttttgcagtagagatggaactaagaa--agaaccatcgac 1066 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagagga 501 |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1067 tataaccccaaaagaaccagatttcgtaaacaacatagagga 1108 Score = 224 bits (113), Expect = 3e-55 Identities = 212/240 (88%), Gaps = 15/240 (6%) Strand = Plus / Plus Query: 4 aaaaaattgtcttatttggtaagtt-----tataaattaacaaataagnacaggnaaagn 58 ||||||||| ||||||||||||| | |||||||||||||||||| ||||| |||| Sbjct: 624 aaaaaattgccttatttggtaaggttataatataaattaacaaataag-acagg-aaag- 680 Query: 59 agtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataag 118 ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 681 agtaaattttcgcccgcgaaatctttattgaattagaatactttaccgcgattcaataag 740 Query: 119 agtaaaaataaggatatttttt----agaaggactacattattatctataaatatagaat 174 |||||||||||||| ||||||| |||| || ||| |||||||||||||||||||| Sbjct: 741 agtaaaaataaggagattttttgttaagaaagattac---attatctataaatatagaat 797 Query: 175 ttagataaatatccacacacatctggatatattctagatcttcttttttgactatatatt 234 |||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 798 atagataaatagacacacacatctagatatattctagatcttctttcttgactatatatt 857
>gb|DQ113928.1| Calamagrostis muiriana isolate B1 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 258 bits (130), Expect = 2e-65 Identities = 211/232 (90%), Gaps = 7/232 (3%) Strand = Plus / Minus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||||||||||||||||| ||||||||||||||||||| ||||| |||| ||||| Sbjct: 237 aaaaaattgtcttatttggtaaggttataaattaacaaataag-acagg-aaag-agtaa 181 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||| Sbjct: 180 atattcgcccgcgaaatactttttgaattagaatactttaccattattcaataagagtaa 121 Query: 124 aaataaggatattttttagaaggactacattattatctat-aaatatagaatttagataa 182 ||||||||||||||||| ||||| ||| || |||||| ||||||||||||||||||| Sbjct: 120 aaataaggatattttttttaaggattac---atcatctataaaatatagaatttagataa 64 Query: 183 atatccacacacatctggatatattctagatcttcttttttgactatatatt 234 ||| ||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 63 atagacacacacatctagatatattctagatcttctttcttgactatatatt 12
>gb|DQ289159.1| Oryza granulata L ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1142 Score = 256 bits (129), Expect = 7e-65 Identities = 204/228 (89%), Gaps = 11/228 (4%) Strand = Plus / Plus Query: 280 cctaactttttctattatctattaatgngtatctatccgtaccgtaatatttttaaatat 339 |||||||||||||||| |||||||||| ||||||||||||| |||||| ||||| Sbjct: 926 cctaactttttctattttctattaatgtgtatctatccgta-----atatttgagaatat 980 Query: 340 tatggaattagagaaatttatttacatgctttctcattccattcgcgaggagctggatga 399 | ||||||||||||||||| || |||||||||| |||||||||||||||||||| Sbjct: 981 tgtggaattagagaaatttg----cacactttctcatttgattcgcgaggagctggatga 1036 Query: 400 gaagaaactctcatgtccagttttggagtagagatggaactaagaaagagaaccatcgac 459 ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 1037 gaagaaactctcatgtccagttttgcagtagagatggaactaag--agagaaccatcgac 1094 Query: 460 tataaccccaaaagaaccagatttcgcaaacaacatagaggaagaatg 507 |||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1095 tataaccccaaaagaaccagatttcgtaaacaacatagaggaagaatg 1142 Score = 137 bits (69), Expect = 5e-29 Identities = 102/109 (93%), Gaps = 3/109 (2%) Strand = Plus / Plus Query: 17 atttggtaagtttataaattaacaaataagnacaggnaaagnagtaaatattcgcccgcg 76 ||||| |||| |||| |||||||||||||| ||||| |||| |||||||||||||||||| Sbjct: 659 atttgataaggttatgaattaacaaataag-acagg-aaag-agtaaatattcgcccgcg 715 Query: 77 aaattcttattgaattagaatactttaccgcgattcaataagagtaaaa 125 ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 aaatttttattgaattagaatactttaccgcgattcaataagagtaaaa 764 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 163 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 222 |||||||||||| |||||||||| || ||||| || ||||||||||||||||||||| | Sbjct: 821 taaatatagaatatagataaataaacatacacacctagatatattctagatcttctttct 880 Query: 223 tgactatatatt 234 |||||||||||| Sbjct: 881 tgactatatatt 892
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 252 bits (127), Expect = 1e-63 Identities = 184/202 (91%), Gaps = 2/202 (0%) Strand = Plus / Minus Query: 379 cattcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaa 438 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| | Sbjct: 82904 cattcgcgaggagctggatgagaagaaactctcatgtccagttctgcagtagagatggga 82845 Query: 439 ctaagaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacataga 498 ||||||| | |||||| |||||||||||||||||||||||||||| |||||||||||| Sbjct: 82844 ttaagaaaca--accatcaactataaccccaaaagaaccagatttcgtaaacaacataga 82787 Query: 499 ggaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctctt 558 ||||||||||| |||| ||| | |||||||||| ||||||||| |||||||| |||||| Sbjct: 82786 ggaagaatgaagggaatatcttatcgaggcaatcatatttgtttcggtagatacgctctt 82727 Query: 559 caagcacttgaacccgcttgga 580 ||||||||||||||| |||||| Sbjct: 82726 caagcacttgaaccctcttgga 82705
>gb|DQ113934.1| Calamagrostis breweri isolate X17 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 250 bits (126), Expect = 4e-63 Identities = 210/232 (90%), Gaps = 7/232 (3%) Strand = Plus / Minus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||||||||||||||||| ||||||||||||||||||| ||||| |||| ||||| Sbjct: 237 aaaaaattgtcttatttggtaaggttataaattaacaaataag-acagg-aaag-agtaa 181 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||| Sbjct: 180 atattcgcccgcgaaatactttttgaattagaatactttaccattattcaataagagtaa 121 Query: 124 aaataaggatattttttagaaggactacattattatctat-aaatatagaatttagataa 182 ||||||||||||||||| ||||| ||| || ||| || ||||||||||||||||||| Sbjct: 120 aaataaggatattttttttaaggattac---atcatccataaaatatagaatttagataa 64 Query: 183 atatccacacacatctggatatattctagatcttcttttttgactatatatt 234 ||| ||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 63 atagacacacacatctagatatattctagatcttctttcttgactatatatt 12
>gb|DQ113933.1| Calamagrostis breweri isolate RMP0198 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 250 bits (126), Expect = 4e-63 Identities = 210/232 (90%), Gaps = 7/232 (3%) Strand = Plus / Minus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||||||||||||||||| ||||||||||||||||||| ||||| |||| ||||| Sbjct: 237 aaaaaattgtcttatttggtaaggttataaattaacaaataag-acagg-aaag-agtaa 181 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||| Sbjct: 180 atattcgcccgcgaaatactttttgaattagaatactttaccattattcaataagagtaa 121 Query: 124 aaataaggatattttttagaaggactacattattatctat-aaatatagaatttagataa 182 ||||||||||||||||| ||||| ||| || ||| || ||||||||||||||||||| Sbjct: 120 aaataaggatattttttttaaggattac---atcatccataaaatatagaatttagataa 64 Query: 183 atatccacacacatctggatatattctagatcttcttttttgactatatatt 234 ||| ||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 63 atagacacacacatctagatatattctagatcttctttcttgactatatatt 12
>gb|DQ113932.1| Calamagrostis breweri isolate BW8259 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 250 bits (126), Expect = 4e-63 Identities = 210/232 (90%), Gaps = 7/232 (3%) Strand = Plus / Minus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||||||||||||||||| ||||||||||||||||||| ||||| |||| ||||| Sbjct: 237 aaaaaattgtcttatttggtaaggttataaattaacaaataag-acagg-aaag-agtaa 181 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||| Sbjct: 180 atattcgcccgcgaaatactttttgaattagaatactttaccattattcaataagagtaa 121 Query: 124 aaataaggatattttttagaaggactacattattatctat-aaatatagaatttagataa 182 ||||||||||||||||| ||||| ||| || ||| || ||||||||||||||||||| Sbjct: 120 aaataaggatattttttttaaggattac---atcatccataaaatatagaatttagataa 64 Query: 183 atatccacacacatctggatatattctagatcttcttttttgactatatatt 234 ||| ||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 63 atagacacacacatctagatatattctagatcttctttcttgactatatatt 12
>gb|DQ113931.1| Calamagrostis breweri isolate RMP0007 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 250 bits (126), Expect = 4e-63 Identities = 210/232 (90%), Gaps = 7/232 (3%) Strand = Plus / Minus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||||||||||||||||| ||||||||||||||||||| ||||| |||| ||||| Sbjct: 237 aaaaaattgtcttatttggtaaggttataaattaacaaataag-acagg-aaag-agtaa 181 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||| Sbjct: 180 atattcgcccgcgaaatactttttgaattagaatactttaccattattcaataagagtaa 121 Query: 124 aaataaggatattttttagaaggactacattattatctat-aaatatagaatttagataa 182 ||||||||||||||||| ||||| ||| || ||| || ||||||||||||||||||| Sbjct: 120 aaataaggatattttttttaaggattac---atcatccataaaatatagaatttagataa 64 Query: 183 atatccacacacatctggatatattctagatcttcttttttgactatatatt 234 ||| ||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 63 atagacacacacatctagatatattctagatcttctttcttgactatatatt 12
>gb|DQ113930.1| Calamagrostis muiriana isolate B4 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 250 bits (126), Expect = 4e-63 Identities = 210/232 (90%), Gaps = 7/232 (3%) Strand = Plus / Minus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||||||||||||||||| ||||||||||||||||||| ||||| |||| ||||| Sbjct: 237 aaaaaattgtcttatttggtaaggttataaattaacaaataag-acagg-aaag-agtaa 181 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||| Sbjct: 180 atattcgcccgcgaaatactttttgaattagaatactttaccattattcaataagagtaa 121 Query: 124 aaataaggatattttttagaaggactacattattatctat-aaatatagaatttagataa 182 ||||||||||||||||| ||||| ||| || ||| || ||||||||||||||||||| Sbjct: 120 aaataaggatattttttttaaggattac---atcatccataaaatatagaatttagataa 64 Query: 183 atatccacacacatctggatatattctagatcttcttttttgactatatatt 234 ||| ||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 63 atagacacacacatctagatatattctagatcttctttcttgactatatatt 12
>gb|DQ113929.1| Calamagrostis muiriana isolate B3 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 250 bits (126), Expect = 4e-63 Identities = 210/232 (90%), Gaps = 7/232 (3%) Strand = Plus / Minus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||||||||||||||||| ||||||||||||||||||| ||||| |||| ||||| Sbjct: 237 aaaaaattgtcttatttggtaaggttataaattaacaaataag-acagg-aaag-agtaa 181 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||| Sbjct: 180 atattcgcccgcgaaatactttttgaattagaatactttaccattattcaataagagtaa 121 Query: 124 aaataaggatattttttagaaggactacattattatctat-aaatatagaatttagataa 182 ||||||||||||||||| ||||| ||| || ||| || ||||||||||||||||||| Sbjct: 120 aaataaggatattttttttaaggattac---atcatccataaaatatagaatttagataa 64 Query: 183 atatccacacacatctggatatattctagatcttcttttttgactatatatt 234 ||| ||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 63 atagacacacacatctagatatattctagatcttctttcttgactatatatt 12
>gb|DQ113927.1| Calamagrostis muiriana isolate A7 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 250 bits (126), Expect = 4e-63 Identities = 210/232 (90%), Gaps = 7/232 (3%) Strand = Plus / Minus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||||||||||||||||| ||||||||||||||||||| ||||| |||| ||||| Sbjct: 237 aaaaaattgtcttatttggtaaggttataaattaacaaataag-acagg-aaag-agtaa 181 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||| Sbjct: 180 atattcgcccgcgaaatactttttgaattagaatactttacctttattcaataagagtaa 121 Query: 124 aaataaggatattttttagaaggactacattattatctat-aaatatagaatttagataa 182 ||||||||||||||||| ||||| ||| || ||| || ||||||||||||||||||| Sbjct: 120 aaataaggatattttttttaaggattac---atcatccataaaatatagaatttagataa 64 Query: 183 atatccacacacatctggatatattctagatcttcttttttgactatatatt 234 ||| ||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 63 atagacacacacatctagatatattctagatcttctttcttgactatatatt 12
>gb|DQ113926.1| Calamagrostis muiriana isolate A1 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 250 bits (126), Expect = 4e-63 Identities = 210/232 (90%), Gaps = 7/232 (3%) Strand = Plus / Minus Query: 4 aaaaaattgtcttatttggtaagtttataaattaacaaataagnacaggnaaagnagtaa 63 ||||||||||||||||||||||| ||||||||||||||||||| ||||| |||| ||||| Sbjct: 237 aaaaaattgtcttatttggtaaggttataaattaacaaataag-acagg-aaag-agtaa 181 Query: 64 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 123 ||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||| Sbjct: 180 atattcgcccgcgaaatactttttgaattagaatactttacctttattcaataagagtaa 121 Query: 124 aaataaggatattttttagaaggactacattattatctat-aaatatagaatttagataa 182 ||||||||||||||||| ||||| ||| || ||| || ||||||||||||||||||| Sbjct: 120 aaataaggatattttttttaaggattac---atcatccataaaatatagaatttagataa 64 Query: 183 atatccacacacatctggatatattctagatcttcttttttgactatatatt 234 ||| ||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 63 atagacacacacatctagatatattctagatcttctttcttgactatatatt 12
>gb|AF028556.1| Adansonia perrieri ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, partial cds Length = 1283 Score = 248 bits (125), Expect = 2e-62 Identities = 182/200 (91%), Gaps = 2/200 (1%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1036 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1095 Query: 441 aagaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagagg 500 || | | ||||||| |||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 1096 --gataaacaaccatcaactataacccaaaaagaaccagatttcgtaaacaacatagagg 1153 Query: 501 aagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttca 560 |||||||||||||| ||| | ||||| ||||| |||||||| ||||||||||||||||| Sbjct: 1154 aagaatgaaaggaatatcttatcgaggtaatcgcatttgtttcggtagatatgctcttca 1213 Query: 561 agcacttgaacccgcttgga 580 |||||||||||||||||||| Sbjct: 1214 agcacttgaacccgcttgga 1233
>gb|AF028555.1| Adansonia za accession C ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, partial cds Length = 1284 Score = 248 bits (125), Expect = 2e-62 Identities = 182/200 (91%), Gaps = 2/200 (1%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1037 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1096 Query: 441 aagaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagagg 500 || | | ||||||| |||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 1097 --gataaacaaccatcaactataacccaaaaagaaccagatttcgtaaacaacatagagg 1154 Query: 501 aagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttca 560 |||||||||||||| ||| | ||||| ||||| |||||||| ||||||||||||||||| Sbjct: 1155 aagaatgaaaggaatatcttatcgaggtaatcgcatttgtttcggtagatatgctcttca 1214 Query: 561 agcacttgaacccgcttgga 580 |||||||||||||||||||| Sbjct: 1215 agcacttgaacccgcttgga 1234
>gb|AF028554.1| Adansonia za accession B ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, partial cds Length = 1285 Score = 248 bits (125), Expect = 2e-62 Identities = 182/200 (91%), Gaps = 2/200 (1%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1038 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1097 Query: 441 aagaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagagg 500 || | | ||||||| |||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 1098 --gataaacaaccatcaactataacccaaaaagaaccagatttcgtaaacaacatagagg 1155 Query: 501 aagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttca 560 |||||||||||||| ||| | ||||| ||||| |||||||| ||||||||||||||||| Sbjct: 1156 aagaatgaaaggaatatcttatcgaggtaatcgcatttgtttcggtagatatgctcttca 1215 Query: 561 agcacttgaacccgcttgga 580 |||||||||||||||||||| Sbjct: 1216 agcacttgaacccgcttgga 1235
>gb|AF028553.1| Adansonia za accession A ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, partial cds Length = 1288 Score = 248 bits (125), Expect = 2e-62 Identities = 182/200 (91%), Gaps = 2/200 (1%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1041 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1100 Query: 441 aagaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagagg 500 || | | ||||||| |||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 1101 --gataaacaaccatcaactataacccaaaaagaaccagatttcgtaaacaacatagagg 1158 Query: 501 aagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttca 560 |||||||||||||| ||| | ||||| ||||| |||||||| ||||||||||||||||| Sbjct: 1159 aagaatgaaaggaatatcttatcgaggtaatcgcatttgtttcggtagatatgctcttca 1218 Query: 561 agcacttgaacccgcttgga 580 |||||||||||||||||||| Sbjct: 1219 agcacttgaacccgcttgga 1238
>gb|AF028552.1| Adansonia madagascariensis accession C ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, partial cds Length = 1282 Score = 248 bits (125), Expect = 2e-62 Identities = 182/200 (91%), Gaps = 2/200 (1%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1035 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1094 Query: 441 aagaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagagg 500 || | | ||||||| |||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 1095 --gataaacaaccatcaactataacccaaaaagaaccagatttcgtaaacaacatagagg 1152 Query: 501 aagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttca 560 |||||||||||||| ||| | ||||| ||||| |||||||| ||||||||||||||||| Sbjct: 1153 aagaatgaaaggaatatcttatcgaggtaatcgcatttgtttcggtagatatgctcttca 1212 Query: 561 agcacttgaacccgcttgga 580 |||||||||||||||||||| Sbjct: 1213 agcacttgaacccgcttgga 1232
>gb|AF028551.1| Adansonia madagascariensis accession B ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, partial cds Length = 1309 Score = 248 bits (125), Expect = 2e-62 Identities = 182/200 (91%), Gaps = 2/200 (1%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1062 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1121 Query: 441 aagaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagagg 500 || | | ||||||| |||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 1122 --gataaacaaccatcaactataacccaaaaagaaccagatttcgtaaacaacatagagg 1179 Query: 501 aagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttca 560 |||||||||||||| ||| | ||||| ||||| |||||||| ||||||||||||||||| Sbjct: 1180 aagaatgaaaggaatatcttatcgaggtaatcgcatttgtttcggtagatatgctcttca 1239 Query: 561 agcacttgaacccgcttgga 580 |||||||||||||||||||| Sbjct: 1240 agcacttgaacccgcttgga 1259
>gb|AF028550.1| Adansonia madagascariensis accession A ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, partial cds Length = 1283 Score = 248 bits (125), Expect = 2e-62 Identities = 182/200 (91%), Gaps = 2/200 (1%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1036 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1095 Query: 441 aagaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagagg 500 || | | ||||||| |||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 1096 --gataaacaaccatcaactataacccaaaaagaaccagatttcgtaaacaacatagagg 1153 Query: 501 aagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttca 560 |||||||||||||| ||| | ||||| ||||| |||||||| ||||||||||||||||| Sbjct: 1154 aagaatgaaaggaatatcttatcgaggtaatcgcatttgtttcggtagatatgctcttca 1213 Query: 561 agcacttgaacccgcttgga 580 |||||||||||||||||||| Sbjct: 1214 agcacttgaacccgcttgga 1233
>gb|AF028549.1| Adansonia rubrostipa ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, partial cds Length = 1285 Score = 248 bits (125), Expect = 2e-62 Identities = 182/200 (91%), Gaps = 2/200 (1%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1038 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1097 Query: 441 aagaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagagg 500 || | | ||||||| |||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 1098 --gataaacaaccatcaactataacccaaaaagaaccagatttcgtaaacaacatagagg 1155 Query: 501 aagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttca 560 |||||||||||||| ||| | ||||| ||||| |||||||| ||||||||||||||||| Sbjct: 1156 aagaatgaaaggaatatcttatcgaggtaatcgcatttgtttcggtagatatgctcttca 1215 Query: 561 agcacttgaacccgcttgga 580 |||||||||||||||||||| Sbjct: 1216 agcacttgaacccgcttgga 1235
>gb|AF028548.1| Adansonia suarezensis accession B ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, partial cds Length = 1341 Score = 248 bits (125), Expect = 2e-62 Identities = 182/200 (91%), Gaps = 2/200 (1%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1094 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1153 Query: 441 aagaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagagg 500 || | | ||||||| |||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 1154 --gataaacaaccatcaactataacccaaaaagaaccagatttcgtaaacaacatagagg 1211 Query: 501 aagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttca 560 |||||||||||||| ||| | ||||| ||||| |||||||| ||||||||||||||||| Sbjct: 1212 aagaatgaaaggaatatcttatcgaggtaatcgcatttgtttcggtagatatgctcttca 1271 Query: 561 agcacttgaacccgcttgga 580 |||||||||||||||||||| Sbjct: 1272 agcacttgaacccgcttgga 1291
>gb|AF028547.1| Adansonia suarezensis accession A ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, partial cds Length = 1341 Score = 248 bits (125), Expect = 2e-62 Identities = 182/200 (91%), Gaps = 2/200 (1%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1094 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1153 Query: 441 aagaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagagg 500 || | | ||||||| |||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 1154 --gataaacaaccatcaactataacccaaaaagaaccagatttcgtaaacaacatagagg 1211 Query: 501 aagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttca 560 |||||||||||||| ||| | ||||| ||||| |||||||| ||||||||||||||||| Sbjct: 1212 aagaatgaaaggaatatcttatcgaggtaatcgcatttgtttcggtagatatgctcttca 1271 Query: 561 agcacttgaacccgcttgga 580 |||||||||||||||||||| Sbjct: 1272 agcacttgaacccgcttgga 1291
>gb|AF028546.1| Adansonia grandidieri accession B ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, partial cds Length = 1317 Score = 248 bits (125), Expect = 2e-62 Identities = 182/200 (91%), Gaps = 2/200 (1%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1070 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1129 Query: 441 aagaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagagg 500 || | | ||||||| |||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 1130 --gataaacaaccatcaactataacccaaaaagaaccagatttcgtaaacaacatagagg 1187 Query: 501 aagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttca 560 |||||||||||||| ||| | ||||| ||||| |||||||| ||||||||||||||||| Sbjct: 1188 aagaatgaaaggaatatcttatcgaggtaatcgcatttgtttcggtagatatgctcttca 1247 Query: 561 agcacttgaacccgcttgga 580 |||||||||||||||||||| Sbjct: 1248 agcacttgaacccgcttgga 1267
>gb|AF028545.1| Adansonia grandidieri accession A ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, partial cds Length = 1317 Score = 248 bits (125), Expect = 2e-62 Identities = 182/200 (91%), Gaps = 2/200 (1%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1070 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1129 Query: 441 aagaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagagg 500 || | | ||||||| |||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 1130 --gataaacaaccatcaactataacccaaaaagaaccagatttcgtaaacaacatagagg 1187 Query: 501 aagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttca 560 |||||||||||||| ||| | ||||| ||||| |||||||| ||||||||||||||||| Sbjct: 1188 aagaatgaaaggaatatcttatcgaggtaatcgcatttgtttcggtagatatgctcttca 1247 Query: 561 agcacttgaacccgcttgga 580 |||||||||||||||||||| Sbjct: 1248 agcacttgaacccgcttgga 1267
>gb|AF028544.1| Adansonia digitata accession B ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, partial cds Length = 1320 Score = 248 bits (125), Expect = 2e-62 Identities = 182/200 (91%), Gaps = 2/200 (1%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1073 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1132 Query: 441 aagaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagagg 500 || | | ||||||| |||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 1133 --gataaacaaccatcaactataacccaaaaagaaccagatttcgtaaacaacatagagg 1190 Query: 501 aagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttca 560 |||||||||||||| ||| | ||||| ||||| |||||||| ||||||||||||||||| Sbjct: 1191 aagaatgaaaggaatatcttatcgaggtaatcgcatttgtttcggtagatatgctcttca 1250 Query: 561 agcacttgaacccgcttgga 580 |||||||||||||||||||| Sbjct: 1251 agcacttgaacccgcttgga 1270
>gb|AF028543.1| Adansonia digitata accession A ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, partial cds Length = 1318 Score = 248 bits (125), Expect = 2e-62 Identities = 182/200 (91%), Gaps = 2/200 (1%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1071 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1130 Query: 441 aagaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagagg 500 || | | ||||||| |||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 1131 --gataaacaaccatcaactataacccaaaaagaaccagatttcgtaaacaacatagagg 1188 Query: 501 aagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttca 560 |||||||||||||| ||| | ||||| ||||| |||||||| ||||||||||||||||| Sbjct: 1189 aagaatgaaaggaatatcttatcgaggtaatcgcatttgtttcggtagatatgctcttca 1248 Query: 561 agcacttgaacccgcttgga 580 |||||||||||||||||||| Sbjct: 1249 agcacttgaacccgcttgga 1268
>gb|AF028542.1| Adansonia gibbosa ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, partial cds Length = 1282 Score = 248 bits (125), Expect = 2e-62 Identities = 182/200 (91%), Gaps = 2/200 (1%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1035 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1094 Query: 441 aagaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagagg 500 || | | ||||||| |||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 1095 --gataaacaaccatcaactataacccaaaaagaaccagatttcgtaaacaacatagagg 1152 Query: 501 aagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttca 560 |||||||||||||| ||| | ||||| ||||| |||||||| ||||||||||||||||| Sbjct: 1153 aagaatgaaaggaatatcttatcgaggtaatcgcatttgtttcggtagatatgctcttca 1212 Query: 561 agcacttgaacccgcttgga 580 |||||||||||||||||||| Sbjct: 1213 agcacttgaacccgcttgga 1232
>gb|AF028541.1| Bombax buonopozense ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, partial cds Length = 1198 Score = 248 bits (125), Expect = 2e-62 Identities = 182/200 (91%), Gaps = 2/200 (1%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 981 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1040 Query: 441 aagaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagagg 500 || | | ||||||| |||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 1041 --gataaacaaccatcaactataacccaaaaagaaccagatttcgtaaacaacatagagg 1098 Query: 501 aagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttca 560 |||||||||||||| ||| | ||||| ||||| |||||||| ||||||||||||||||| Sbjct: 1099 aagaatgaaaggaatatcttatcgaggtaatcgcatttgtttcggtagatatgctcttca 1158 Query: 561 agcacttgaacccgcttgga 580 |||||||||||||||||||| Sbjct: 1159 agcacttgaacccgcttgga 1178
>gb|AF028540.1| Pachira aquatica ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, partial cds Length = 1185 Score = 248 bits (125), Expect = 2e-62 Identities = 182/200 (91%), Gaps = 2/200 (1%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 938 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 997 Query: 441 aagaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagagg 500 || | | ||||||| |||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 998 --gataaacaaccatcaactataacccaaaaagaaccagatttcgtaaacaacatagagg 1055 Query: 501 aagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttca 560 |||||||||||||| ||| | ||||| ||||| |||||||| ||||||||||||||||| Sbjct: 1056 aagaatgaaaggaatatcttatcgaggtaatcgcatttgtttcggtagatatgctcttca 1115 Query: 561 agcacttgaacccgcttgga 580 |||||||||||||||||||| Sbjct: 1116 agcacttgaacccgcttgga 1135
>gb|AF028539.1| Pseudobombax marginatum ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, partial cds Length = 1270 Score = 248 bits (125), Expect = 2e-62 Identities = 182/200 (91%), Gaps = 2/200 (1%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1023 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1082 Query: 441 aagaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagagg 500 || | | ||||||| |||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 1083 --gataaacaaccatcaactataacccaaaaagaaccagatttcgtaaacaacatagagg 1140 Query: 501 aagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttca 560 |||||||||||||| ||| | ||||| ||||| |||||||| ||||||||||||||||| Sbjct: 1141 aagaatgaaaggaatatcttatcgaggtaatcgcatttgtttcggtagatatgctcttca 1200 Query: 561 agcacttgaacccgcttgga 580 |||||||||||||||||||| Sbjct: 1201 agcacttgaacccgcttgga 1220
>gb|AY526902.1| Fagus grandifolia ribosomal protein L16 (rpl16) gene, exon 2 and partial cds; chloroplast Length = 1187 Score = 242 bits (122), Expect = 1e-60 Identities = 182/201 (90%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 380 attcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaac 439 |||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||| Sbjct: 953 attcgcgaggagctggatgagaagaaactctcatgtccggttctgtagtagagatggaat 1012 Query: 440 taagaaagagaaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||||||| |||||| ||||||||||||||||||||||||| || ||||||||||||| Sbjct: 1013 tgagaaaga--accatcaactataaccccaaaagaaccagattccgtaaacaacatagag 1070 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 ||||||||||||||| ||| | ||||| ||||||||||| || |||||||||||||||| Sbjct: 1071 gaagaatgaaaggaatatcttatcgaggtaatcgtatttgcttcggtagatatgctcttc 1130 Query: 560 aagcacttgaacccgcttgga 580 | |||||||||||||| |||| Sbjct: 1131 aggcacttgaacccgcgtgga 1151 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 633 agtaaatattcgcccgcgaaa 653
>gb|AF059483.1|AF059483 Gossypium rotundifolium plant number Gos5217 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1260 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1009 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1068 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1069 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1128 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1129 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1188 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1189 aagcacttgaacccgcttgga 1209 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 689 agtaaatattcgcccgcgaaa 709
>gb|AF059482.1|AF059482 Gossypium rotundifolium plant number Gos5212 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1260 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1009 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1068 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1069 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1128 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1129 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1188 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1189 aagcacttgaacccgcttgga 1209 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 689 agtaaatattcgcccgcgaaa 709
>gb|AF059481.1|AF059481 Gossypium rotundifolium plant number PI499789 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1251 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1000 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1059 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1060 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1119 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1120 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1179 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1180 aagcacttgaacccgcttgga 1200 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 689 agtaaatattcgcccgcgaaa 709
>gb|AF059480.1|AF059480 Gossypium rotundifolium plant number PI499787 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1260 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1009 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1068 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1069 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1128 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1129 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1188 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1189 aagcacttgaacccgcttgga 1209 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 689 agtaaatattcgcccgcgaaa 709
>gb|AF059479.1|AF059479 Gossypium rotundifolium plant number LC9278 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1260 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1009 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1068 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1069 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1128 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1129 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1188 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1189 aagcacttgaacccgcttgga 1209 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 689 agtaaatattcgcccgcgaaa 709
>gb|AF059478.1|AF059478 Gossypium rotundifolium plant number LC9270 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1260 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1009 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1068 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1069 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1128 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1129 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1188 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1189 aagcacttgaacccgcttgga 1209 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 689 agtaaatattcgcccgcgaaa 709
>gb|AF059477.1|AF059477 Gossypium pulchellum plant number Gos5204 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1254 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1003 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1062 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1063 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1122 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1123 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1182 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1183 aagcacttgaacccgcttgga 1203 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 683 agtaaatattcgcccgcgaaa 703
>gb|AF059476.1|AF059476 Gossypium pulchellum plant number PI464858 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1254 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1003 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1062 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1063 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1122 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1123 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1182 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1183 aagcacttgaacccgcttgga 1203 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 683 agtaaatattcgcccgcgaaa 703
>gb|AF059475.1|AF059475 Gossypium pulchellum plant number LC9169 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1254 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1003 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1062 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1063 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1122 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1123 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1182 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1183 aagcacttgaacccgcttgga 1203 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 683 agtaaatattcgcccgcgaaa 703
>gb|AF059474.1|AF059474 Gossypium populifolium plant number PI499808 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1254 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1003 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1062 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1063 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1122 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1123 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1182 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1183 aagcacttgaacccgcttgga 1203 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 683 agtaaatattcgcccgcgaaa 703
>gb|AF059473.1|AF059473 Gossypium populifolium plant number LC9250 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1254 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1003 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1062 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1063 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1122 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1123 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1182 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1183 aagcacttgaacccgcttgga 1203 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 683 agtaaatattcgcccgcgaaa 703
>gb|AF059472.1|AF059472 Gossypium populifolium plant number LC9209 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1260 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1009 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1068 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1069 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1128 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1129 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1188 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1189 aagcacttgaacccgcttgga 1209 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 689 agtaaatattcgcccgcgaaa 709
>gb|AF059471.1|AF059471 Gossypium populifolium plant number LC9203 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1254 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1003 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1062 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1063 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1122 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1123 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1182 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1183 aagcacttgaacccgcttgga 1203 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 683 agtaaatattcgcccgcgaaa 703
>gb|AF059470.1|AF059470 Gossypium populifolium plant number IC4278 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1260 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1009 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1068 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1069 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1128 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1129 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1188 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1189 aagcacttgaacccgcttgga 1209 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 689 agtaaatattcgcccgcgaaa 709
>gb|AF059469.1|AF059469 Gossypium populifolium plant number IC4257 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1254 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1003 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1062 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1063 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1122 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1123 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1182 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1183 aagcacttgaacccgcttgga 1203 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 683 agtaaatattcgcccgcgaaa 703
>gb|AF059468.1|AF059468 Gossypium pilosum plant number CampRd ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1260 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1009 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1068 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1069 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1128 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1129 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1188 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1189 aagcacttgaacccgcttgga 1209 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 689 agtaaatattcgcccgcgaaa 709
>gb|AF059467.1|AF059467 Gossypium pilosum plant number PI499803 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1254 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1003 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1062 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1063 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1122 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1123 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1182 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1183 aagcacttgaacccgcttgga 1203 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 683 agtaaatattcgcccgcgaaa 703
>gb|AF059466.1|AF059466 Gossypium pilosum plant number PI499786 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1260 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1009 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1068 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1069 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1128 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1129 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1188 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1189 aagcacttgaacccgcttgga 1209 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 689 agtaaatattcgcccgcgaaa 709
>gb|AF059465.1|AF059465 Gossypium pilosum plant number PI499785 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1260 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1009 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1068 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1069 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1128 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1129 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1188 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1189 aagcacttgaacccgcttgga 1209 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 689 agtaaatattcgcccgcgaaa 709
>gb|AF059464.1|AF059464 Gossypium pilosum plant number PI478760 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1260 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1009 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1068 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1069 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1128 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1129 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1188 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1189 aagcacttgaacccgcttgga 1209 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 689 agtaaatattcgcccgcgaaa 709
>gb|AF059463.1|AF059463 Gossypium pilosum plant number LC9252 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1254 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1003 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1062 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1063 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1122 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1123 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1182 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1183 aagcacttgaacccgcttgga 1203 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 683 agtaaatattcgcccgcgaaa 703
>gb|AF059462.1|AF059462 Gossypium nobile plant number IC4235 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1254 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1003 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1062 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1063 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1122 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1123 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1182 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1183 aagcacttgaacccgcttgga 1203 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 683 agtaaatattcgcccgcgaaa 703
>gb|AF059461.1|AF059461 Gossypium nobile plant number IC4231 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1262 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1011 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1070 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1071 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1130 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1131 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1190 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1191 aagcacttgaacccgcttgga 1211 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 691 agtaaatattcgcccgcgaaa 711
>gb|AF059460.1|AF059460 Gossypium nobile plant number IC4229 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1254 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1003 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1062 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1063 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1122 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1123 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1182 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1183 aagcacttgaacccgcttgga 1203 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 683 agtaaatattcgcccgcgaaa 703
>gb|AF059459.1|AF059459 Gossypium marchantii plant number PI499770 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1254 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1003 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1062 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1063 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1122 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1123 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1182 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1183 aagcacttgaacccgcttgga 1203 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 683 agtaaatattcgcccgcgaaa 703
>gb|AF059458.1|AF059458 Gossypium marchantii plant number IC4219 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1260 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1009 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1068 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1069 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1128 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1129 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1188 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1189 aagcacttgaacccgcttgga 1209 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 689 agtaaatattcgcccgcgaaa 709
>gb|AF059457.1|AF059457 Gossypium marchantii plant number IC4211 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1260 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1009 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1068 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1069 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1128 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1129 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1188 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1189 aagcacttgaacccgcttgga 1209 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 689 agtaaatattcgcccgcgaaa 709
>gb|AF059456.1|AF059456 Gossypium marchantii plant number IC4203 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1254 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1003 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1062 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1063 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1122 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1123 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1182 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1183 aagcacttgaacccgcttgga 1203 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 683 agtaaatattcgcccgcgaaa 703
>gb|AF059455.1|AF059455 Gossypium londonderriense plant number SC-29 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1260 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1009 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1068 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1069 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1128 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1129 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1188 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1189 aagcacttgaacccgcttgga 1209 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 689 agtaaatattcgcccgcgaaa 709
>gb|AF059454.1|AF059454 Gossypium londonderriense plant number LC9200 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1260 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1009 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1068 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1069 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1128 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1129 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1188 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1189 aagcacttgaacccgcttgga 1209 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 689 agtaaatattcgcccgcgaaa 709
>gb|AF059453.1|AF059453 Gossypium londonderriense plant number LC9194 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1260 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1009 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1068 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1069 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1128 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1129 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1188 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1189 aagcacttgaacccgcttgga 1209 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 689 agtaaatattcgcccgcgaaa 709
>gb|AF059452.1|AF059452 Gossypium exiguum plant number Goss5182 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1260 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1009 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1068 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1069 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1128 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1129 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1188 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1189 aagcacttgaacccgcttgga 1209 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 689 agtaaatattcgcccgcgaaa 709
>gb|AF059451.1|AF059451 Gossypium exiguum plant number LC9235 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1254 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1003 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1062 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1063 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1122 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1123 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1182 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1183 aagcacttgaacccgcttgga 1203 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 683 agtaaatattcgcccgcgaaa 703
>gb|AF059450.1|AF059450 Gossypium exiguum plant number LC9225B ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1260 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1009 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1068 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1069 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1128 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1129 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1188 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1189 aagcacttgaacccgcttgga 1209 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 689 agtaaatattcgcccgcgaaa 709
>gb|AF059449.1|AF059449 Gossypium exiguum plant number LC9151 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1260 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1009 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1068 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1069 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1128 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1129 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1188 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1189 aagcacttgaacccgcttgga 1209 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 689 agtaaatattcgcccgcgaaa 709
>gb|AF059448.1|AF059448 Gossypium exiguum plant number IC4223 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1261 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1010 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1069 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1070 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1129 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1130 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1189 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1190 aagcacttgaacccgcttgga 1210 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 690 agtaaatattcgcccgcgaaa 710
>gb|AF059447.1|AF059447 Gossypium enthyle plant number LC9239 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1260 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1009 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1068 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1069 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1128 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1129 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1188 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1189 aagcacttgaacccgcttgga 1209 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 689 agtaaatattcgcccgcgaaa 709
>gb|AF059446.1|AF059446 Gossypium enthyle plant number LC9238 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1260 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1009 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1068 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1069 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1128 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1129 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1188 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1189 aagcacttgaacccgcttgga 1209 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 689 agtaaatattcgcccgcgaaa 709
>gb|AF059445.1|AF059445 Gossypium enthyle plant number LC9224 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1260 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1009 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1068 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1069 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1128 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1129 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1188 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1189 aagcacttgaacccgcttgga 1209 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 689 agtaaatattcgcccgcgaaa 709
>gb|AF059444.1|AF059444 Gossypium cunninghamii plant number PI499778 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1261 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1010 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1069 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1070 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1129 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1130 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1189 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1190 aagcacttgaacccgcttgga 1210 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 690 agtaaatattcgcccgcgaaa 710
>gb|AF059443.1|AF059443 Gossypium cunninghamii plant number PI499777 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1256 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1005 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1064 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1065 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1124 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1125 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1184 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1185 aagcacttgaacccgcttgga 1205 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 690 agtaaatattcgcccgcgaaa 710
>gb|AF059442.1|AF059442 Gossypium cunninghamii plant number PI499776 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1261 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1010 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1069 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1070 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1129 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1130 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1189 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1190 aagcacttgaacccgcttgga 1210 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 690 agtaaatattcgcccgcgaaa 710
>gb|AF059441.1|AF059441 Gossypium cunninghamii plant number PI499775 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1261 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1010 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1069 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1070 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1129 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1130 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1189 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1190 aagcacttgaacccgcttgga 1210 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 690 agtaaatattcgcccgcgaaa 710
>gb|AF059440.1|AF059440 Gossypium cunninghamii plant number PI499774 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1261 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1010 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1069 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1070 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1129 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1130 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1189 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1190 aagcacttgaacccgcttgga 1210 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 690 agtaaatattcgcccgcgaaa 710
>gb|AF059439.1|AF059439 Gossypium costulatum plant number LC9262 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1260 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1009 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1068 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1069 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1128 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1129 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1188 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1189 aagcacttgaacccgcttgga 1209 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 689 agtaaatattcgcccgcgaaa 709
>gb|AF059438.1|AF059438 Gossypium costulatum plant number LC9260 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1260 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1009 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1068 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1069 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1128 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1129 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1188 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1189 aagcacttgaacccgcttgga 1209 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 689 agtaaatattcgcccgcgaaa 709
>gb|AF059437.1|AF059437 Gossypium costulatum plant number LC9241 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1260 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1009 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1068 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1069 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1128 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1129 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1188 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1189 aagcacttgaacccgcttgga 1209 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 689 agtaaatattcgcccgcgaaa 709
>gb|AF059436.1|AF059436 Gossypium anapoides plant number LC9193 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1267 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1016 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1075 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1076 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1135 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1136 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1195 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1196 aagcacttgaacccgcttgga 1216 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 696 agtaaatattcgcccgcgaaa 716
>gb|AF059435.1|AF059435 Gossypium anapoides plant number LC9192 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1267 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1016 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1075 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1076 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1135 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1136 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1195 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1196 aagcacttgaacccgcttgga 1216 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 696 agtaaatattcgcccgcgaaa 716
>gb|AF059434.1|AF059434 Gossypium anapoides plant number 9188 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1267 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1016 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1075 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1076 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1135 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1136 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1195 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1196 aagcacttgaacccgcttgga 1216 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 696 agtaaatattcgcccgcgaaa 716
>gb|AF059433.1|AF059433 Gossypium australe plant number PI499756 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1260 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1009 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1068 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1069 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1128 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1129 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1188 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1189 aagcacttgaacccgcttgga 1209 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 689 agtaaatattcgcccgcgaaa 709
>gb|AF059432.1|AF059432 Gossypium australe plant number PI478754 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1260 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1009 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1068 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1069 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1128 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1129 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1188 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1189 aagcacttgaacccgcttgga 1209 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 689 agtaaatattcgcccgcgaaa 709
>gb|AF059431.1|AF059431 Gossypium australe plant number LC9361 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1260 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1009 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1068 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1069 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1128 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1129 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1188 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1189 aagcacttgaacccgcttgga 1209 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 689 agtaaatattcgcccgcgaaa 709
>gb|AF059430.1|AF059430 Gossypium nelsonii plant number PI499783 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1260 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1009 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1068 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1069 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1128 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1129 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1188 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1189 aagcacttgaacccgcttgga 1209 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 689 agtaaatattcgcccgcgaaa 709
>gb|AF059429.1|AF059429 Gossypium nelsonii plant number LC9356 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1260 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1009 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1068 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1069 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1128 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1129 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1188 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1189 aagcacttgaacccgcttgga 1209 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 689 agtaaatattcgcccgcgaaa 709
>gb|AF059428.1|AF059428 Gossypium bickii plant number Gos5048 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1260 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1009 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1068 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1069 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1128 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1129 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1188 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1189 aagcacttgaacccgcttgga 1209 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 689 agtaaatattcgcccgcgaaa 709
>gb|AF059427.1|AF059427 Gossypium bickii plant number PI464843 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1260 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1009 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1068 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1069 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1128 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1129 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1188 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1189 aagcacttgaacccgcttgga 1209 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 689 agtaaatattcgcccgcgaaa 709
>gb|AF059426.1|AF059426 Gossypium bickii plant number LC9360 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1260 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1009 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1068 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1069 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1128 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1129 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1188 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1189 aagcacttgaacccgcttgga 1209 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 689 agtaaatattcgcccgcgaaa 709
>gb|AF059423.1|AF059423 Gossypium sturtianum plant number Gos5237 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1261 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1010 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1069 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1070 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1129 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1130 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1189 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1190 aagcacttgaacccgcttgga 1210 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 690 agtaaatattcgcccgcgaaa 710
>gb|AF059422.1|AF059422 Gossypium sturtianum plant number Gos5119 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1261 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1010 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1069 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1070 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1129 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1130 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1189 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1190 aagcacttgaacccgcttgga 1210 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 690 agtaaatattcgcccgcgaaa 710
>gb|AF059421.1|AF059421 Gossypium sturtianum plant number Gos5076 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1261 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1010 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1069 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1070 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1129 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1130 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1189 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1190 aagcacttgaacccgcttgga 1210 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 690 agtaaatattcgcccgcgaaa 710
>gb|AF059420.1|AF059420 Gossypium sturtianum plant number PI499810 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1262 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1011 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1070 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1071 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1130 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1131 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1190 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1191 aagcacttgaacccgcttgga 1211 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 691 agtaaatattcgcccgcgaaa 711
>gb|AF059419.1|AF059419 Gossypium sturtianum plant number LC9355 ribosomal protein 16 large subunit (rpl16) gene, chloroplast gene encoding chloroplast protein, exon 2 and partial cds Length = 1262 Score = 240 bits (121), Expect = 4e-60 Identities = 182/201 (90%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 381 ttcgcgaggagctggatgagaagaaactctcatgtccagttttggagtagagatggaact 440 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 1011 ttcgcgaggagctggatgagaagaaactctcatgtccagttctgtagtagagatggaatt 1070 Query: 441 aagaaagag-aaccatcgactataaccccaaaagaaccagatttcgcaaacaacatagag 499 | ||| | ||||||| |||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1071 cataaacaacaaccatcaactataaccccaaaagaacccgatttcgtaaacaacatagag 1130 Query: 500 gaagaatgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttc 559 |||||||||| || | ||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 1131 gaagaatgaaggggatatcttatcgaggtaatcggatttgttttggtagatatgctcttc 1190 Query: 560 aagcacttgaacccgcttgga 580 ||||||||||||||||||||| Sbjct: 1191 aagcacttgaacccgcttgga 1211 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 agtaaatattcgcccgcgaaa 79 ||||||||||||||||||||| Sbjct: 691 agtaaatattcgcccgcgaaa 711 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9,786,977 Number of Sequences: 3902068 Number of extensions: 9786977 Number of successful extensions: 244671 Number of sequences better than 10.0: 3305 Number of HSP's better than 10.0 without gapping: 3312 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 233004 Number of HSP's gapped (non-prelim): 10337 length of query: 580 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 557 effective length of database: 17,143,297,704 effective search space: 9548816821128 effective search space used: 9548816821128 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
