ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags9l17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 117 4e-23
2gb|AC118675.2| Genomic sequence for Oryza sativa, Nipponbare str... 117 4e-23
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 117 4e-23
4gb|AC134231.2| Oryza sativa (japonica cultivar-group) chromosome... 117 4e-23
5gb|AC108767.10| Mus musculus chromosome 3, clone RP24-377E5, com... 42 2.0
6gb|AC161268.5| Mus musculus BAC clone RP23-198F11 from chromosom... 42 2.0
7gb|BC028921.1| Mus musculus follistatin-like 1, mRNA (cDNA clone... 42 2.0
8ref|NM_008047.2| Mus musculus follistatin-like 1 (Fstl1), mRNA 42 2.0
9gb|AC142345.1| Pan troglodytes BAC clone RP43-1K4 from Y, comple... 42 2.0
10gb|AC129539.11| Mus musculus chromosome 16, clone RP23-246B24, c... 42 2.0
11gb|AC124773.4| Mus musculus BAC clone RP23-49B23 from 3, complet... 42 2.0
12gb|AC139190.1| Pan troglodytes BAC clone RP43-12I19 from Y, comp... 42 2.0
13emb|AL590239.7| Human DNA sequence from clone RP11-466D24 on chr... 42 2.0
14dbj|BS000551.1| Pan troglodytes chromosome Y clone:PTB-295A05, c... 42 2.0
15gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 42 2.0
16dbj|AK147117.1| Mus musculus 17 days embryo heart cDNA, RIKEN fu... 42 2.0
17gb|AC015766.9| Homo sapiens chromosome 18, clone RP11-1P16, comp... 42 2.0
18gb|AC079140.6| Homo sapiens BAC clone RP11-478C6 from 4, complet... 42 2.0
19dbj|AK049440.1| Mus musculus 7 days embryo whole body cDNA, RIKE... 42 2.0
20gb|AC009709.7|AC009709 Homo sapiens chromosome 18, clone RP11-31... 42 2.0
21dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
22gb|AC009233.3|AC009233 Homo sapiens BAC clone RP11-356K22 from Y... 42 2.0
23dbj|AP004769.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
24gb|AC007911.8|AC007911 Homo sapiens chromosome 18, clone RP11-52... 42 2.0
25gb|M91380.1|MUSTSC36A Mus musculus TGF-beta-inducible protein (T... 42 2.0
26gb|BC006185.1| Mus musculus follistatin-like 1, mRNA (cDNA clone... 42 2.0
27gb|AC115868.12| Mus musculus chromosome 7, clone RP24-329F21, co... 40 8.0
28gb|AE000661.1|HUAE000661 Homo sapiens T-cell receptor alpha delt... 40 8.0
29gb|AC144488.2| Gasterosteus aculeatus clone CH213-119K16, comple... 40 8.0
30gb|AC163636.5| Mus musculus BAC clone RP24-499E13 from chromosom... 40 8.0
31gb|AC121586.3| Mus musculus BAC clone RP23-273A13 from 2, comple... 40 8.0
32ref|XM_719763.1| Plasmodium yoelii yoelii str. 17XNL axonemal dy... 40 8.0
33ref|XM_736360.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 8.0
34ref|XM_670826.1| Plasmodium berghei strain ANKA hypothetical pro... 40 8.0
35emb|AL356285.9| Human DNA sequence from clone RP11-569O4 on chro... 40 8.0
36gb|AC147890.2| Xenopus tropicalis clone CH216-168J11, complete s... 40 8.0
37gb|DQ097956.1| Homo sapiens T cell receptor delta variable 2 (TR... 40 8.0
38gb|AC099671.2| Homo sapiens chromosome 1 clone RP11-466L22, comp... 40 8.0
39gb|AC019051.8| Homo sapiens BAC clone RP11-92L24 from 2, complet... 40 8.0
40gb|AC104598.4| Homo sapiens BAC clone RP11-182K3 from 2, complet... 40 8.0
41gb|AC124319.13| Homo sapiens chromosome 17, clone CTD-2047H16, c... 40 8.0
42gb|AC127515.9| Homo sapiens chromosome 17, clone RP13-63C9, comp... 40 8.0
43gb|AF002992.2| Homo sapiens chromosome X clone ICRFXc104-C024, Q... 40 8.0
44emb|BX276109.11| Mouse DNA sequence from clone RP23-209P8 on chr... 40 8.0
45ref|NG_001332.1| Homo sapiens T cell receptor alpha delta locus ... 40 8.0
46dbj|AP006629.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 8.0
47dbj|AP004545.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 8.0
48emb|X15275.1|HSTRDV2F Human T-cell receptor delta V2F (TRDV2F) g... 40 8.0 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  117 bits (59), Expect = 4e-23
 Identities = 77/83 (92%)
 Strand = Plus / Plus

                                                                            
Query: 1        attgctaatgggatgacagtgcatgtaaatgctcatgcacctgtgcaaaacttgaatctg 60
                ||||| ||||| |||||| ||||||||||||||||||||||||| ||||| |||||| ||
Sbjct: 12924571 attgccaatggaatgacaatgcatgtaaatgctcatgcacctgttcaaaatttgaatgtg 12924630

                                       
Query: 61       gatatgggggaacaatcacctga 83
                |||||||||||||||||||||||
Sbjct: 12924631 gatatgggggaacaatcacctga 12924653



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 77/89 (86%)
 Strand = Plus / Plus

                                                                            
Query: 434      ggaattgaacctcggacatttgaacaacatattggcgaggctgtttttattccagctggc 493
                |||||||||||  |||||||  |||||||||| || |||||||| ||| |||| ||||||
Sbjct: 12925527 ggaattgaaccctggacattccaacaacatatcggtgaggctgtatttgttcctgctggc 12925586

                                             
Query: 494      tgtcctttccaagtaaaaaatctccaggt 522
                || || |||||||| ||||||||||||||
Sbjct: 12925587 tgcccattccaagtgaaaaatctccaggt 12925615



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 107/129 (82%)
 Strand = Plus / Plus

                                                                            
Query: 134      aaccaaaatctaatggtttagaaagatctcagcctggtgctctttgggatgtcttccgca 193
                ||||||||  |||||||| |||||||  |||| ||||| || |||||||||| |||||||
Sbjct: 12924788 aaccaaaagttaatggttcagaaagaagtcaggctggttctgtttgggatgtgttccgca 12924847

                                                                            
Query: 194      ggcaggatgtgccgatgctgaataaatatttagcttctaactgggaggaacttacagtta 253
                |||||||| |  | | ||||||| |||||||| || |||||||||| |||||  ||| ||
Sbjct: 12924848 ggcaggatatttcaaagctgaatgaatatttaactgctaactgggaagaactggcagcta 12924907

                         
Query: 254      gcagtcagg 262
                | |||||||
Sbjct: 12924908 gtagtcagg 12924916



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                            
Query: 359      caggtcaagcatcctatttatgaccaagctgtatatctcaaggagcatcataaaagggta 418
                ||||| ||| ||||||||||||| ||| || ||||||||||  || ||||||||||| ||
Sbjct: 12925009 caggttaagaatcctatttatgaacaatctatatatctcaacaagtatcataaaaggata 12925068

                                 
Query: 419      ttgaaggatcaatatgg 435
                 ||||||||||||||||
Sbjct: 12925069 ctgaaggatcaatatgg 12925085
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>gb|AC118675.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0094H06, from chromosome 3, complete sequence
          Length = 118075

 Score =  117 bits (59), Expect = 4e-23
 Identities = 77/83 (92%)
 Strand = Plus / Minus

                                                                         
Query: 1     attgctaatgggatgacagtgcatgtaaatgctcatgcacctgtgcaaaacttgaatctg 60
             ||||| ||||| |||||| ||||||||||||||||||||||||| ||||| |||||| ||
Sbjct: 14938 attgccaatggaatgacaatgcatgtaaatgctcatgcacctgttcaaaatttgaatgtg 14879

                                    
Query: 61    gatatgggggaacaatcacctga 83
             |||||||||||||||||||||||
Sbjct: 14878 gatatgggggaacaatcacctga 14856



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 107/129 (82%)
 Strand = Plus / Minus

                                                                         
Query: 134   aaccaaaatctaatggtttagaaagatctcagcctggtgctctttgggatgtcttccgca 193
             ||||||||  |||||||| |||||||  |||| ||||| || |||||||||| |||||||
Sbjct: 14721 aaccaaaagttaatggttcagaaagaagtcaggctggttctgtttgggatgtgttccgca 14662

                                                                         
Query: 194   ggcaggatgtgccgatgctgaataaatatttagcttctaactgggaggaacttacagtta 253
             |||||||| |  | | ||||||| |||||||| || |||||||||| |||||  ||| ||
Sbjct: 14661 ggcaggatatttcaaagctgaatgaatatttaactgctaactgggaagaactggcagcta 14602

                      
Query: 254   gcagtcagg 262
             | |||||||
Sbjct: 14601 gtagtcagg 14593



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                         
Query: 434   ggaattgaacctcggacatttgaacaacatattggcgaggctgtttttattccagctggc 493
             |||||||||||  |||||||  |||||||||| || |||||||| ||| |||| ||||||
Sbjct: 13982 ggaattgaaccctggacattccaacaacatatcggtgaggctgtatttgttcctgctggc 13923

                                          
Query: 494   tgtcctttccaagtaaaaaatctccaggt 522
             || || |||||||| ||||||||||||||
Sbjct: 13922 tgcccattccaagtgaaaaatctccaggt 13894



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                         
Query: 359   caggtcaagcatcctatttatgaccaagctgtatatctcaaggagcatcataaaagggta 418
             ||||| ||| ||||||||||||| ||| || ||||||||||  || ||||||||||| ||
Sbjct: 14500 caggttaagaatcctatttatgaacaatctatatatctcaacaagtatcataaaaggata 14441

                              
Query: 419   ttgaaggatcaatatgg 435
              ||||||||||||||||
Sbjct: 14440 ctgaaggatcaatatgg 14424
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  117 bits (59), Expect = 4e-23
 Identities = 77/83 (92%)
 Strand = Plus / Plus

                                                                            
Query: 1        attgctaatgggatgacagtgcatgtaaatgctcatgcacctgtgcaaaacttgaatctg 60
                ||||| ||||| |||||| ||||||||||||||||||||||||| ||||| |||||| ||
Sbjct: 12921334 attgccaatggaatgacaatgcatgtaaatgctcatgcacctgttcaaaatttgaatgtg 12921393

                                       
Query: 61       gatatgggggaacaatcacctga 83
                |||||||||||||||||||||||
Sbjct: 12921394 gatatgggggaacaatcacctga 12921416



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 77/89 (86%)
 Strand = Plus / Plus

                                                                            
Query: 434      ggaattgaacctcggacatttgaacaacatattggcgaggctgtttttattccagctggc 493
                |||||||||||  |||||||  |||||||||| || |||||||| ||| |||| ||||||
Sbjct: 12922290 ggaattgaaccctggacattccaacaacatatcggtgaggctgtatttgttcctgctggc 12922349

                                             
Query: 494      tgtcctttccaagtaaaaaatctccaggt 522
                || || |||||||| ||||||||||||||
Sbjct: 12922350 tgcccattccaagtgaaaaatctccaggt 12922378



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 107/129 (82%)
 Strand = Plus / Plus

                                                                            
Query: 134      aaccaaaatctaatggtttagaaagatctcagcctggtgctctttgggatgtcttccgca 193
                ||||||||  |||||||| |||||||  |||| ||||| || |||||||||| |||||||
Sbjct: 12921551 aaccaaaagttaatggttcagaaagaagtcaggctggttctgtttgggatgtgttccgca 12921610

                                                                            
Query: 194      ggcaggatgtgccgatgctgaataaatatttagcttctaactgggaggaacttacagtta 253
                |||||||| |  | | ||||||| |||||||| || |||||||||| |||||  ||| ||
Sbjct: 12921611 ggcaggatatttcaaagctgaatgaatatttaactgctaactgggaagaactggcagcta 12921670

                         
Query: 254      gcagtcagg 262
                | |||||||
Sbjct: 12921671 gtagtcagg 12921679



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                            
Query: 359      caggtcaagcatcctatttatgaccaagctgtatatctcaaggagcatcataaaagggta 418
                ||||| ||| ||||||||||||| ||| || ||||||||||  || ||||||||||| ||
Sbjct: 12921772 caggttaagaatcctatttatgaacaatctatatatctcaacaagtatcataaaaggata 12921831

                                 
Query: 419      ttgaaggatcaatatgg 435
                 ||||||||||||||||
Sbjct: 12921832 ctgaaggatcaatatgg 12921848
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>gb|AC134231.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
            OSJNBa0006D11, complete sequence
          Length = 176637

 Score =  117 bits (59), Expect = 4e-23
 Identities = 77/83 (92%)
 Strand = Plus / Plus

                                                                        
Query: 1    attgctaatgggatgacagtgcatgtaaatgctcatgcacctgtgcaaaacttgaatctg 60
            ||||| ||||| |||||| ||||||||||||||||||||||||| ||||| |||||| ||
Sbjct: 2269 attgccaatggaatgacaatgcatgtaaatgctcatgcacctgttcaaaatttgaatgtg 2328

                                   
Query: 61   gatatgggggaacaatcacctga 83
            |||||||||||||||||||||||
Sbjct: 2329 gatatgggggaacaatcacctga 2351



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 77/89 (86%)
 Strand = Plus / Plus

                                                                        
Query: 434  ggaattgaacctcggacatttgaacaacatattggcgaggctgtttttattccagctggc 493
            |||||||||||  |||||||  |||||||||| || |||||||| ||| |||| ||||||
Sbjct: 3225 ggaattgaaccctggacattccaacaacatatcggtgaggctgtatttgttcctgctggc 3284

                                         
Query: 494  tgtcctttccaagtaaaaaatctccaggt 522
            || || |||||||| ||||||||||||||
Sbjct: 3285 tgcccattccaagtgaaaaatctccaggt 3313



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 107/129 (82%)
 Strand = Plus / Plus

                                                                        
Query: 134  aaccaaaatctaatggtttagaaagatctcagcctggtgctctttgggatgtcttccgca 193
            ||||||||  |||||||| |||||||  |||| ||||| || |||||||||| |||||||
Sbjct: 2486 aaccaaaagttaatggttcagaaagaagtcaggctggttctgtttgggatgtgttccgca 2545

                                                                        
Query: 194  ggcaggatgtgccgatgctgaataaatatttagcttctaactgggaggaacttacagtta 253
            |||||||| |  | | ||||||| |||||||| || |||||||||| |||||  ||| ||
Sbjct: 2546 ggcaggatatttcaaagctgaatgaatatttaactgctaactgggaagaactggcagcta 2605

                     
Query: 254  gcagtcagg 262
            | |||||||
Sbjct: 2606 gtagtcagg 2614



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                        
Query: 359  caggtcaagcatcctatttatgaccaagctgtatatctcaaggagcatcataaaagggta 418
            ||||| ||| ||||||||||||| ||| || ||||||||||  || ||||||||||| ||
Sbjct: 2707 caggttaagaatcctatttatgaacaatctatatatctcaacaagtatcataaaaggata 2766

                             
Query: 419  ttgaaggatcaatatgg 435
             ||||||||||||||||
Sbjct: 2767 ctgaaggatcaatatgg 2783
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>gb|AC108767.10| Mus musculus chromosome 3, clone RP24-377E5, complete sequence
          Length = 167878

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 412    aagggtattgaaggatcaata 432
              |||||||||||||||||||||
Sbjct: 155287 aagggtattgaaggatcaata 155267
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>gb|AC161268.5| Mus musculus BAC clone RP23-198F11 from chromosome 16, complete
             sequence
          Length = 212995

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 71    aacaatcacctgaacacacag 91
             |||||||||||||||||||||
Sbjct: 70222 aacaatcacctgaacacacag 70242
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>gb|BC028921.1| Mus musculus follistatin-like 1, mRNA (cDNA clone MGC:25371
            IMAGE:2647002), complete cds
          Length = 2851

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 71   aacaatcacctgaacacacag 91
            |||||||||||||||||||||
Sbjct: 1473 aacaatcacctgaacacacag 1493
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>ref|NM_008047.2| Mus musculus follistatin-like 1 (Fstl1), mRNA
          Length = 3610

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 71   aacaatcacctgaacacacag 91
            |||||||||||||||||||||
Sbjct: 1490 aacaatcacctgaacacacag 1510
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>gb|AC142345.1| Pan troglodytes BAC clone RP43-1K4 from Y, complete sequence
          Length = 213921

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 213    gaataaatatttagcttctaa 233
              |||||||||||||||||||||
Sbjct: 194032 gaataaatatttagcttctaa 194052
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>gb|AC129539.11| Mus musculus chromosome 16, clone RP23-246B24, complete sequence
          Length = 238585

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 71   aacaatcacctgaacacacag 91
            |||||||||||||||||||||
Sbjct: 3668 aacaatcacctgaacacacag 3648
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>gb|AC124773.4| Mus musculus BAC clone RP23-49B23 from 3, complete sequence
          Length = 216860

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 412   aagggtattgaaggatcaata 432
             |||||||||||||||||||||
Sbjct: 44245 aagggtattgaaggatcaata 44225
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>gb|AC139190.1| Pan troglodytes BAC clone RP43-12I19 from Y, complete sequence
          Length = 159298

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 213    gaataaatatttagcttctaa 233
              |||||||||||||||||||||
Sbjct: 104348 gaataaatatttagcttctaa 104328
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>emb|AL590239.7| Human DNA sequence from clone RP11-466D24 on chromosome 6, complete
             sequence
          Length = 127316

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 165   gcctggtgctctttgggatgt 185
             |||||||||||||||||||||
Sbjct: 33060 gcctggtgctctttgggatgt 33080
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>dbj|BS000551.1| Pan troglodytes chromosome Y clone:PTB-295A05, complete sequences
          Length = 161601

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 213   gaataaatatttagcttctaa 233
             |||||||||||||||||||||
Sbjct: 57827 gaataaatatttagcttctaa 57807
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 213      gaataaatatttagcttctaa 233
                |||||||||||||||||||||
Sbjct: 15450056 gaataaatatttagcttctaa 15450076
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>dbj|AK147117.1| Mus musculus 17 days embryo heart cDNA, RIKEN full-length enriched
            library, clone:I920177P03 product:follistatin-like 1,
            full insert sequence
          Length = 2834

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 71   aacaatcacctgaacacacag 91
            |||||||||||||||||||||
Sbjct: 1487 aacaatcacctgaacacacag 1507
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>gb|AC015766.9| Homo sapiens chromosome 18, clone RP11-1P16, complete sequence
          Length = 153781

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 519    aggtatgcttctagtgatttt 539
              |||||||||||||||||||||
Sbjct: 120700 aggtatgcttctagtgatttt 120680
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>gb|AC079140.6| Homo sapiens BAC clone RP11-478C6 from 4, complete sequence
          Length = 156265

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 213    gaataaatatttagcttctaa 233
              |||||||||||||||||||||
Sbjct: 124617 gaataaatatttagcttctaa 124637



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 213   gaataaatatttagcttctaa 233
             |||||||||||||||||||||
Sbjct: 81283 gaataaatatttagcttctaa 81263
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>dbj|AK049440.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:C430011K03
            product:follistatin-like 1, full insert sequence
          Length = 3610

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 71   aacaatcacctgaacacacag 91
            |||||||||||||||||||||
Sbjct: 1490 aacaatcacctgaacacacag 1510
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>gb|AC009709.7|AC009709 Homo sapiens chromosome 18, clone RP11-319O9, complete sequence
          Length = 187615

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 494    tgtcctttccaagtaaaaaat 514
              |||||||||||||||||||||
Sbjct: 153220 tgtcctttccaagtaaaaaat 153240
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                          
Query: 434    ggaattgaacctcggacatttgaacaacatattggcgaggctgtttttattccagctggc 493
              |||||||| ||| |||||||||||||  |  |||| |||||||| ||||| ||||| || 
Sbjct: 510770 ggaattgagccttggacatttgaacagaaacttggtgaggctgtgtttatcccagcagga 510711

                   
Query: 494    tgtcc 498
              |||||
Sbjct: 510710 tgtcc 510706
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>gb|AC009233.3|AC009233 Homo sapiens BAC clone RP11-356K22 from Y, complete sequence
          Length = 195439

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 213    gaataaatatttagcttctaa 233
              |||||||||||||||||||||
Sbjct: 164869 gaataaatatttagcttctaa 164849
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>dbj|AP004769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0017C12
          Length = 135356

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                          
Query: 434    ggaattgaacctcggacatttgaacaacatattggcgaggctgtttttattccagctggc 493
              |||||||| ||| |||||||||||||  |  |||| |||||||| ||||| ||||| || 
Sbjct: 107011 ggaattgagccttggacatttgaacagaaacttggtgaggctgtgtttatcccagcagga 106952

                   
Query: 494    tgtcc 498
              |||||
Sbjct: 106951 tgtcc 106947
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>gb|AC007911.8|AC007911 Homo sapiens chromosome 18, clone RP11-520K18, complete sequence
          Length = 160299

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 494    tgtcctttccaagtaaaaaat 514
              |||||||||||||||||||||
Sbjct: 147307 tgtcctttccaagtaaaaaat 147327
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>gb|M91380.1|MUSTSC36A Mus musculus TGF-beta-inducible protein (TSC-36) mRNA, complete cds
          Length = 2823

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 71   aacaatcacctgaacacacag 91
            |||||||||||||||||||||
Sbjct: 1470 aacaatcacctgaacacacag 1490
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>gb|BC006185.1| Mus musculus follistatin-like 1, mRNA (cDNA clone IMAGE:3498052)
          Length = 1677

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 71   aacaatcacctgaacacacag 91
            |||||||||||||||||||||
Sbjct: 1517 aacaatcacctgaacacacag 1537
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>gb|AC115868.12| Mus musculus chromosome 7, clone RP24-329F21, complete sequence
          Length = 181717

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 160   tctcagcctggtgctctttgggatgtct 187
             |||||||||| | |||||||||||||||
Sbjct: 44605 tctcagcctgctcctctttgggatgtct 44578
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>gb|AE000661.1|HUAE000661 Homo sapiens T-cell receptor alpha delta locus from bases 752679 to
              1000555 (section 4 of 5) of the Complete Nucleotide
              Sequence
          Length = 247877

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      tgctaatgggatgacagtgc 22
              ||||||||||||||||||||
Sbjct: 176334 tgctaatgggatgacagtgc 176315
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>gb|AC144488.2| Gasterosteus aculeatus clone CH213-119K16, complete sequence
          Length = 217665

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 214    aataaatatttagcttctaa 233
              ||||||||||||||||||||
Sbjct: 154144 aataaatatttagcttctaa 154125
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>gb|AC163636.5| Mus musculus BAC clone RP24-499E13 from chromosome 1, complete sequence
          Length = 173781

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 163   cagcctggtgctctttggga 182
             ||||||||||||||||||||
Sbjct: 67177 cagcctggtgctctttggga 67196
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>gb|AC121586.3| Mus musculus BAC clone RP23-273A13 from 2, complete sequence
          Length = 154614

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    aatcacctgaacacacagtt 93
             ||||||||||||||||||||
Sbjct: 46738 aatcacctgaacacacagtt 46757
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>ref|XM_719763.1| Plasmodium yoelii yoelii str. 17XNL axonemal dynein heavy chain 8
             (PY04544) partial mRNA
          Length = 12294

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 417   tattgaaggatcaatatggaattg 440
             |||||||||||||| |||||||||
Sbjct: 12012 tattgaaggatcaaaatggaattg 12035
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>ref|XM_736360.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000861.02.0)
           partial mRNA
          Length = 708

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 417 tattgaaggatcaatatggaattg 440
           |||||||||||||| |||||||||
Sbjct: 426 tattgaaggatcaaaatggaattg 449
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>ref|XM_670826.1| Plasmodium berghei strain ANKA hypothetical protein (PB000358.03.0)
            partial mRNA
          Length = 2580

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 417  tattgaaggatcaatatggaattg 440
            |||||||||||||| |||||||||
Sbjct: 2298 tattgaaggatcaaaatggaattg 2321
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>emb|AL356285.9| Human DNA sequence from clone RP11-569O4 on chromosome 13 Contains the
             5' end of the XPO4 gene for likely ortholog of mouse
             exportin 4, a CCR4-NOT transcription complex, subunit 4
             (CNOT4) (NOT4, NOT4H, CLONE243) pseudogene, a
             heterogeneous nuclear ribonucleoprotein A1
             (HNRPA1)(HNRNPA1) pseudogene, a pseudogene similar to part
             of peptidylprolyl isomerase A (cyclophilin A) (PPIA), a
             Laminin receptor 1 (67kD, ribosomal protein
             SA)(LAMR1)(LRP, p40, RPSA, 37LRP, LAMBR) pseudogene, the
             3' end of the LATS2 gene for LATS, large tumor suppressor,
             homolog 2 (LATS (large tumor suppressor, Drosophila)
             homolog 2), two novel genes and three CpG islands,
             complete sequence
          Length = 183597

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 312   tacttttgtcaaatatgttt 331
             ||||||||||||||||||||
Sbjct: 23909 tacttttgtcaaatatgttt 23890
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>gb|AC147890.2| Xenopus tropicalis clone CH216-168J11, complete sequence
          Length = 152053

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 500   ttccaagtaaaaaatctcca 519
             ||||||||||||||||||||
Sbjct: 27071 ttccaagtaaaaaatctcca 27090
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>gb|DQ097956.1| Homo sapiens T cell receptor delta variable 2 (TRDV2) gene,
          partial cds
          Length = 971

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 3  tgctaatgggatgacagtgc 22
          ||||||||||||||||||||
Sbjct: 99 tgctaatgggatgacagtgc 80
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>gb|AC099671.2| Homo sapiens chromosome 1 clone RP11-466L22, complete sequence
          Length = 153934

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   aaaatctaatggtttagaaa 157
             ||||||||||||||||||||
Sbjct: 43043 aaaatctaatggtttagaaa 43062
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>gb|AC019051.8| Homo sapiens BAC clone RP11-92L24 from 2, complete sequence
          Length = 137248

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 485   ccagctggctgtcctttccaagta 508
             ||||||||||||| ||||||||||
Sbjct: 76457 ccagctggctgtcatttccaagta 76480
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>gb|AC104598.4| Homo sapiens BAC clone RP11-182K3 from 2, complete sequence
          Length = 126118

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 46    caaaacttgaatctggatat 65
             ||||||||||||||||||||
Sbjct: 81868 caaaacttgaatctggatat 81849
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>gb|AC124319.13| Homo sapiens chromosome 17, clone CTD-2047H16, complete sequence
          Length = 121112

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 472   ggctgtttttattccagctg 491
             ||||||||||||||||||||
Sbjct: 86378 ggctgtttttattccagctg 86397
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>gb|AC127515.9| Homo sapiens chromosome 17, clone RP13-63C9, complete sequence
          Length = 88190

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 472   ggctgtttttattccagctg 491
             ||||||||||||||||||||
Sbjct: 21831 ggctgtttttattccagctg 21812
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>gb|AF002992.2| Homo sapiens chromosome X clone ICRFXc104-C024, Qc-17E5, Qc-17H2,
             Qc-14E2_B, Qc-12F10, ICRFXc104-D0899 map q28, complete
             sequence
          Length = 104050

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 373   tatttatgaccaagctgtat 392
             ||||||||||||||||||||
Sbjct: 53237 tatttatgaccaagctgtat 53218
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>emb|BX276109.11| Mouse DNA sequence from clone RP23-209P8 on chromosome 2, complete
             sequence
          Length = 69864

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 74    aatcacctgaacacacagtt 93
             ||||||||||||||||||||
Sbjct: 50001 aatcacctgaacacacagtt 49982
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>ref|NG_001332.1| Homo sapiens T cell receptor alpha delta locus (TCRA/TCRD) on chromosome
              14
          Length = 1071646

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      tgctaatgggatgacagtgc 22
              ||||||||||||||||||||
Sbjct: 929012 tgctaatgggatgacagtgc 928993
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>dbj|AP006629.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT10B11, TM0008,
             complete sequence
          Length = 116223

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   gctgaataaatatttagctt 229
             ||||||||||||||||||||
Sbjct: 25328 gctgaataaatatttagctt 25309
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>dbj|AP004545.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT26E16, TM0103,
             complete sequence
          Length = 100595

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                         
Query: 437   attgaacctcggacatttgaacaacatattggcgaggctgtttt 480
             ||||||||  |||| ||||| |||||  ||||||||||||||||
Sbjct: 82616 attgaaccatggacgtttgagcaacaccttggcgaggctgtttt 82659
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>emb|X15275.1|HSTRDV2F Human T-cell receptor delta V2F (TRDV2F) gene, 5' flank
          Length = 600

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 3   tgctaatgggatgacagtgc 22
           ||||||||||||||||||||
Sbjct: 428 tgctaatgggatgacagtgc 409


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,146,224
Number of Sequences: 3902068
Number of extensions: 6146224
Number of successful extensions: 109403
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 109168
Number of HSP's gapped (non-prelim): 236
length of query: 588
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 565
effective length of database: 17,143,297,704
effective search space: 9685963202760
effective search space used: 9685963202760
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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