ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags9l15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY107381.1| Zea mays PCO061330 mRNA sequence 577 e-161
2ref|XM_475553.1| Oryza sativa (japonica cultivar-group), predic... 547 e-152
3dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clon... 547 e-152
4dbj|AK066314.1| Oryza sativa (japonica cultivar-group) cDNA clon... 547 e-152
5gb|BT009263.1| Triticum aestivum clone wlk4.pk0023.a11:fis, full... 505 e-140
6gb|BT017728.1| Zea mays clone EL01N0447H09.c mRNA sequence 504 e-139
7gb|BT016848.1| Zea mays clone Contig681 mRNA sequence 432 e-118
8emb|AJ278988.1|STU278988 Solanum tuberosum partial mRNA for isov... 226 5e-56
9emb|AJ010945.1|PSA010945 Pisum sativum mRNA for Isovaleryl-CoA d... 226 5e-56
10ref|NM_114399.3| Arabidopsis thaliana IVD (ISOVALERYL-COA-DEHYDR... 190 3e-45
11emb|Y12695.1|ATISOVAL A.thaliana mRNA for isovaleryl-CoA dehydro... 190 3e-45
12gb|AY128799.1| Arabidopsis thaliana isovaleryl-CoA-dehydrogenase... 182 7e-43
13gb|AY062567.1| Arabidopsis thaliana isovaleryl-CoA-dehydrogenase... 182 7e-43
14gb|AF160729.1|AF160729 Arabidopsis thaliana isovaleryl-CoA-dehyd... 182 7e-43
15gb|AY087286.1| Arabidopsis thaliana clone 33674 mRNA, complete s... 182 7e-43
16gb|AC134931.2| Oryza sativa (japonica cultivar-group) chromosome... 159 1e-35
17dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 159 1e-35
18gb|AC129720.2| Oryza sativa (japonica cultivar-group) chromosome... 159 1e-35
19emb|AJ278987.1|STU278987 Solanum tuberosum mRNA for isovaleryl-C... 133 6e-28
20gb|AC152176.5| Medicago truncatula clone mth2-65c4, complete seq... 82 2e-12
21gb|BT016182.1| Zea mays clone Contig15 mRNA sequence 74 5e-10
22emb|AJ010946.1|PSA010946 Pisum sativum abp44/ivdh gene for Isova... 72 2e-09
23emb|AL132953.2|ATF18N11 Arabidopsis thaliana DNA chromosome 3, B... 66 1e-07
24gb|BC106210.1| Xenopus laevis cDNA clone IMAGE:7980776, partial cds 58 3e-05
25gb|BC094479.1| Xenopus laevis cDNA clone IMAGE:7020557, partial cds 58 3e-05
26emb|CT030360.1| Xenopus tropicalis finished cDNA, clone TGas106c19 48 0.027
27ref|NM_001011380.1| Xenopus tropicalis hypothetical LOC496848 (L... 48 0.027
28gb|BC088561.1| Xenopus tropicalis hypothetical LOC496848, mRNA (... 48 0.027
29gb|AC121313.8| Mus musculus chromosome 14, clone RP24-395N22, co... 44 0.43
30gb|AC154508.2| Mus musculus BAC clone RP24-96P6 from chromosome ... 44 0.43
31gb|AC165952.4| Mus musculus BAC clone RP23-460G24 from chromosom... 42 1.7
32ref|XM_641986.1| Dictyostelium discoideum hypothetical protein (... 42 1.7
33gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 42 1.7
34gb|AC137511.3| Mus musculus BAC clone RP24-313I8 from chromosome... 42 1.7
35gb|AC141429.4| Mus musculus BAC clone RP23-56L6 from chromosome ... 42 1.7
36dbj|AB018156.1| Candida versatilis gene for 18S rRNA, partial se... 42 1.7
37gb|AC132468.4| Mus musculus BAC clone RP23-78D19 from 14, comple... 42 1.7
38gb|AC134588.5| Mus musculus BAC clone RP23-314N18 from 14, compl... 42 1.7
39gb|AC131670.5| Mus musculus BAC clone RP23-307I19 from 5, comple... 42 1.7
40ref|NM_128998.3| Arabidopsis thaliana unknown protein AT2G34460 ... 40 6.7
41ref|XM_636412.1| Dictyostelium discoideum isovaleryl-CoA dehydro... 40 6.7
42gb|BC077756.1| Xenopus laevis MGC79063 protein, mRNA (cDNA clone... 40 6.7
43gb|AC147618.3| Mus musculus chromosome 19 clone RP24-245M20, com... 40 6.7
44gb|AC145433.2| Pan troglodytes BAC clone RP43-43I4 from 7, compl... 40 6.7
45gb|AC141437.4| Mus musculus BAC clone RP23-283O7 from chromosome... 40 6.7
46gb|BT000884.1| Arabidopsis thaliana clone C105360 unknown protei... 40 6.7
47gb|AC142317.1| Pan troglodytes BAC clone RP43-52L16 from 7, comp... 40 6.7
48emb|AL512648.21| Human DNA sequence from clone RP11-465C24 on ch... 40 6.7
49gb|AY034977.1| Arabidopsis thaliana unknown protein (At2g34460) ... 40 6.7
50emb|CR628337.1| Legionella pneumophila str. Lens complete genome 40 6.7
51emb|CR628336.1| Legionella pneumophila str. Paris complete genome 40 6.7
52gb|AC181983.2| Gallus gallus BAC clone CH261-63A17 from chromoso... 40 6.7
53gb|AC004481.3| Arabidopsis thaliana chromosome 2 clone F13P17 ma... 40 6.7
54gb|AC004077.3| Arabidopsis thaliana chromosome 2 clone T31E10 ma... 40 6.7
55gb|DQ244011.1| Uncultured fungus clone PFA12AU2004 18S ribosomal... 40 6.7
56emb|AJ628768.1| Bacteriophage S-RSM2 ORF1, omp1 gene, psbA gene,... 40 6.7
57gb|AY056425.1| Arabidopsis thaliana At2g34460/T31E10.20 mRNA, co... 40 6.7
58gb|AC008449.6| Homo sapiens chromosome 5 clone CTC-341A9, comple... 40 6.7
59gb|AF039047.3| Caenorhabditis elegans cosmid K11D12, complete se... 40 6.7
60gb|AC151989.4| Mus musculus BAC clone RP23-298C3 from chromosome... 40 6.7
61ref|NM_071946.4| Caenorhabditis elegans Serpentine Receptor, cla... 40 6.7
62dbj|AK032454.1| Mus musculus adult male olfactory brain cDNA, RI... 40 6.7
63emb|BX819331.1|CNS0AA83 Arabidopsis thaliana Full-length cDNA Co... 40 6.7
64gb|BC045100.1| Xenopus laevis, clone IMAGE:5542112, mRNA 40 6.7
65dbj|AB032202.1| Mus musculus Prss19 gene for neuropsin, complete... 40 6.7 
>gb|AY107381.1| Zea mays PCO061330 mRNA sequence
          Length = 1531

 Score =  577 bits (291), Expect = e-161
 Identities = 435/483 (90%)
 Strand = Plus / Plus

                                                                       
Query: 3   tgccaaagctaatcagtggggaccatattggggcattggcaatgagtgaaccaaactctg 62
           |||| ||||| ||||||||||| ||||| |||||| |||| ||||||||||| |||||||
Sbjct: 504 tgcccaagctgatcagtggggagcatatcggggcactggcgatgagtgaacccaactctg 563

                                                                       
Query: 63  gctctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggcggctatgtcatta 122
           |||||||||| ||||| ||||||||||||||||||||||| || || ||||||||| |||
Sbjct: 564 gctctgatgtcgtcagcatgaagtgcaaagctgagaaagtggacggtggctatgtcctta 623

                                                                       
Query: 123 atgggaataagatgtggtgcacaaatggtccatctgctcagacattggttgtttacgcga 182
           |||||||||||||||||||||| ||||| || |||||||||||| ||||||||||||| |
Sbjct: 624 atgggaataagatgtggtgcaccaatggcccgtctgctcagacactggttgtttacgcaa 683

                                                                       
Query: 183 aaacagatataactgctggatcgaaaggaataactgcattcataattgagaaggggatgc 242
           |||||||| || |||| || || ||||||||||||||||||||||| ||||| |||||||
Sbjct: 684 aaacagatctagctgcagggtcaaaaggaataactgcattcataatcgagaaagggatgc 743

                                                                       
Query: 243 cagggttcagtactgcacagaagttggacaaacttggcatgcgaggaagtgacacatgtg 302
           | |||||||||||||| |||||||||||||||||||||||| ||||||| ||||| ||||
Sbjct: 744 ccgggttcagtactgctcagaagttggacaaacttggcatgagaggaagcgacacgtgtg 803

                                                                       
Query: 303 agcttgtctttgagaactgctttgtgcctcgagagaatgttcttggtgaagaaggaaaag 362
           ||||||| ||||||||||||||||||||  | || ||||| || ||||||||||| ||||
Sbjct: 804 agcttgtttttgagaactgctttgtgccatgcgaaaatgtcctcggtgaagaaggcaaag 863

                                                                       
Query: 363 gtgtttatgtcatgatgtctggtcttgatctggaaagacttgtattagctgggggtccta 422
           ||||||||||||||||||| || |||||||||||||| ||||||||||||| ||| ||||
Sbjct: 864 gtgtttatgtcatgatgtcagggcttgatctggaaaggcttgtattagctgcgggcccta 923

                                                                       
Query: 423 ttgggctcatgcaggcatgccttgatgttgttcttccttatgttcgacagagggagcaat 482
           |||| || ||||||||||||||||||||||| ||||| |||||||| |||||||||||||
Sbjct: 924 ttggccttatgcaggcatgccttgatgttgtacttccatatgttcgccagagggagcaat 983

              
Query: 483 tcg 485
           |||
Sbjct: 984 tcg 986
to top
>ref|XM_475553.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1230

 Score =  547 bits (276), Expect = e-152
 Identities = 435/488 (89%)
 Strand = Plus / Plus

                                                                       
Query: 5   ccaaagctaatcagtggggaccatattggggcattggcaatgagtgaaccaaactctggc 64
           |||||||||||||||||||| ||| | ||||||||||| ||||| ||||| |||||||| 
Sbjct: 418 ccaaagctaatcagtggggagcatgtgggggcattggcgatgagcgaacccaactctggt 477

                                                                       
Query: 65  tctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggcggctatgtcattaat 124
           |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| 
Sbjct: 478 tctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggtggttatgtcattaac 537

                                                                       
Query: 125 gggaataagatgtggtgcacaaatggtccatctgctcagacattggttgtttacgcgaaa 184
           |||||||||||||||||||| || || ||||||||||||||| ||||||| || || |||
Sbjct: 538 gggaataagatgtggtgcaccaacgggccatctgctcagacactggttgtgtatgcaaaa 597

                                                                       
Query: 185 acagatataactgctggatcgaaaggaataactgcattcataattgagaaggggatgcca 244
           ||||||||| |||||||||| ||||||||||| || ||||||||||||||||||||||| 
Sbjct: 598 acagatatagctgctggatcaaaaggaataaccgcgttcataattgagaaggggatgccc 657

                                                                       
Query: 245 gggttcagtactgcacagaagttggacaaacttggcatgcgaggaagtgacacatgtgag 304
           ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 658 gggttcagtactgcacagaagttggacaagcttggcatgagaggaagtgacacatgtgag 717

                                                                       
Query: 305 cttgtctttgagaactgctttgtgcctcgagagaatgttcttggtgaagaaggaaaaggt 364
           ||||| || ||||| || |||||||| |  || || ||||| || |||||||| ||||||
Sbjct: 718 cttgtgttcgagaattgttttgtgccccatgaaaacgttctcggggaagaagggaaaggt 777

                                                                       
Query: 365 gtttatgtcatgatgtctggtcttgatctggaaagacttgtattagctgggggtcctatt 424
           ||||||||||||||||| || |||||||| ||||||||||| |||||||  |||||||| 
Sbjct: 778 gtttatgtcatgatgtcagggcttgatctagaaagacttgtgttagctgcaggtcctatc 837

                                                                       
Query: 425 gggctcatgcaggcatgccttgatgttgttcttccttatgttcgacagagggagcaattc 484
           || |||||||| |||||||||||||| | | ||||||||||||| || || |||||||| 
Sbjct: 838 ggcctcatgcaagcatgccttgatgtagctgttccttatgttcgccaaagagagcaattt 897

                   
Query: 485 gggcgtcc 492
           || |||||
Sbjct: 898 ggccgtcc 905
to top
>dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072N03, full
            insert sequence
          Length = 1663

 Score =  547 bits (276), Expect = e-152
 Identities = 435/488 (89%)
 Strand = Plus / Plus

                                                                        
Query: 5    ccaaagctaatcagtggggaccatattggggcattggcaatgagtgaaccaaactctggc 64
            |||||||||||||||||||| ||| | ||||||||||| ||||| ||||| |||||||| 
Sbjct: 681  ccaaagctaatcagtggggagcatgtgggggcattggcgatgagcgaacccaactctggt 740

                                                                        
Query: 65   tctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggcggctatgtcattaat 124
            |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| 
Sbjct: 741  tctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggtggttatgtcattaac 800

                                                                        
Query: 125  gggaataagatgtggtgcacaaatggtccatctgctcagacattggttgtttacgcgaaa 184
            |||||||||||||||||||| || || ||||||||||||||| ||||||| || || |||
Sbjct: 801  gggaataagatgtggtgcaccaacgggccatctgctcagacactggttgtgtatgcaaaa 860

                                                                        
Query: 185  acagatataactgctggatcgaaaggaataactgcattcataattgagaaggggatgcca 244
            ||||||||| |||||||||| ||||||||||| || ||||||||||||||||||||||| 
Sbjct: 861  acagatatagctgctggatcaaaaggaataaccgcgttcataattgagaaggggatgccc 920

                                                                        
Query: 245  gggttcagtactgcacagaagttggacaaacttggcatgcgaggaagtgacacatgtgag 304
            ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 921  gggttcagtactgcacagaagttggacaagcttggcatgagaggaagtgacacatgtgag 980

                                                                        
Query: 305  cttgtctttgagaactgctttgtgcctcgagagaatgttcttggtgaagaaggaaaaggt 364
            ||||| || ||||| || |||||||| |  || || ||||| || |||||||| ||||||
Sbjct: 981  cttgtgttcgagaattgttttgtgccccatgaaaacgttctcggggaagaagggaaaggt 1040

                                                                        
Query: 365  gtttatgtcatgatgtctggtcttgatctggaaagacttgtattagctgggggtcctatt 424
            ||||||||||||||||| || |||||||| ||||||||||| |||||||  |||||||| 
Sbjct: 1041 gtttatgtcatgatgtcagggcttgatctagaaagacttgtgttagctgcaggtcctatc 1100

                                                                        
Query: 425  gggctcatgcaggcatgccttgatgttgttcttccttatgttcgacagagggagcaattc 484
            || |||||||| |||||||||||||| | | ||||||||||||| || || |||||||| 
Sbjct: 1101 ggcctcatgcaagcatgccttgatgtagctgttccttatgttcgccaaagagagcaattt 1160

                    
Query: 485  gggcgtcc 492
            || |||||
Sbjct: 1161 ggccgtcc 1168
to top
>dbj|AK066314.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013064C04, full
            insert sequence
          Length = 1500

 Score =  547 bits (276), Expect = e-152
 Identities = 435/488 (89%)
 Strand = Plus / Plus

                                                                        
Query: 5    ccaaagctaatcagtggggaccatattggggcattggcaatgagtgaaccaaactctggc 64
            |||||||||||||||||||| ||| | ||||||||||| ||||| ||||| |||||||| 
Sbjct: 518  ccaaagctaatcagtggggagcatgtgggggcattggcgatgagcgaacccaactctggt 577

                                                                        
Query: 65   tctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggcggctatgtcattaat 124
            |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| 
Sbjct: 578  tctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggtggttatgtcattaac 637

                                                                        
Query: 125  gggaataagatgtggtgcacaaatggtccatctgctcagacattggttgtttacgcgaaa 184
            |||||||||||||||||||| || || ||||||||||||||| ||||||| || || |||
Sbjct: 638  gggaataagatgtggtgcaccaacgggccatctgctcagacactggttgtgtatgcaaaa 697

                                                                        
Query: 185  acagatataactgctggatcgaaaggaataactgcattcataattgagaaggggatgcca 244
            ||||||||| |||||||||| ||||||||||| || ||||||||||||||||||||||| 
Sbjct: 698  acagatatagctgctggatcaaaaggaataaccgcgttcataattgagaaggggatgccc 757

                                                                        
Query: 245  gggttcagtactgcacagaagttggacaaacttggcatgcgaggaagtgacacatgtgag 304
            ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 758  gggttcagtactgcacagaagttggacaagcttggcatgagaggaagtgacacatgtgag 817

                                                                        
Query: 305  cttgtctttgagaactgctttgtgcctcgagagaatgttcttggtgaagaaggaaaaggt 364
            ||||| || ||||| || |||||||| |  || || ||||| || |||||||| ||||||
Sbjct: 818  cttgtgttcgagaattgttttgtgccccatgaaaacgttctcggggaagaagggaaaggt 877

                                                                        
Query: 365  gtttatgtcatgatgtctggtcttgatctggaaagacttgtattagctgggggtcctatt 424
            ||||||||||||||||| || |||||||| ||||||||||| |||||||  |||||||| 
Sbjct: 878  gtttatgtcatgatgtcagggcttgatctagaaagacttgtgttagctgcaggtcctatc 937

                                                                        
Query: 425  gggctcatgcaggcatgccttgatgttgttcttccttatgttcgacagagggagcaattc 484
            || |||||||| |||||||||||||| | | ||||||||||||| || || |||||||| 
Sbjct: 938  ggcctcatgcaagcatgccttgatgtagctgttccttatgttcgccaaagagagcaattt 997

                    
Query: 485  gggcgtcc 492
            || |||||
Sbjct: 998  ggccgtcc 1005
to top
>gb|BT009263.1| Triticum aestivum clone wlk4.pk0023.a11:fis, full insert mRNA
           sequence
          Length = 766

 Score =  505 bits (255), Expect = e-140
 Identities = 285/295 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttgccaaagctaatcagtggggaccatattggggcattggcaatgagtgaaccaaactc 60
           |||||| ||||| ||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 465 tttgccgaagcttatcagtggggagcatattggggcattggcgatgagtgaaccaaactc 524

                                                                       
Query: 61  tggctctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggcggctatgtcat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 tggctctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggcggctatgtcat 584

                                                                       
Query: 121 taatgggaataagatgtggtgcacaaatggtccatctgctcagacattggttgtttacgc 180
           ||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 585 taacgggaacaagatgtggtgcacaaatggtccgtctgctcagacattggttgtttacgc 644

                                                                       
Query: 181 gaaaacagatataactgctggatcgaaaggaataactgcattcataattgagaaggggat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 645 gaaaacagatataactgctggatcgaaaggaataactgcattcataattgagaagggaat 704

                                                                  
Query: 241 gccagggttcagtactgcacagaagttggacaaacttggcatgcgaggaagtgac 295
           ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 705 gcccgggttcagtactgcccagaagttggacaaacttggcatgcgaggaagtgac 759
to top
>gb|BT017728.1| Zea mays clone EL01N0447H09.c mRNA sequence
          Length = 942

 Score =  504 bits (254), Expect = e-139
 Identities = 368/406 (90%)
 Strand = Plus / Plus

                                                                       
Query: 87  gcaaagctgagaaagtagatggcggctatgtcattaatgggaataagatgtggtgcacaa 146
           |||||||||||||||| || |||||||||||| ||||||||||||||||||||||||| |
Sbjct: 8   gcaaagctgagaaagtggacggcggctatgtccttaatgggaataagatgtggtgcacca 67

                                                                       
Query: 147 atggtccatctgctcagacattggttgtttacgcgaaaacagatataactgctggatcga 206
           |||| || |||||||||||  |||||||||| || ||||||||| || |||| ||||| |
Sbjct: 68  atgggccgtctgctcagacgctggttgtttatgcaaaaacagatctagctgcgggatcaa 127

                                                                       
Query: 207 aaggaataactgcattcataattgagaaggggatgccagggttcagtactgcacagaagt 266
           |||||||||||||||||||||| ||||| |||||||| ||||||||  |||| ||||| |
Sbjct: 128 aaggaataactgcattcataatcgagaaagggatgcccgggttcagggctgctcagaaat 187

                                                                       
Query: 267 tggacaaacttggcatgcgaggaagtgacacatgtgagcttgtctttgagaactgctttg 326
           ||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 188 tggacaaacttggcatgagaggaagcgacacatgtgagcttgtttttgagaactgctttg 247

                                                                       
Query: 327 tgcctcgagagaatgttcttggtgaagaaggaaaaggtgtttatgtcatgatgtctggtc 386
           |||| || |||||||| || ||||||||||| ||||||||||||||||||||||| || |
Sbjct: 248 tgccacgcgagaatgtcctcggtgaagaaggcaaaggtgtttatgtcatgatgtcagggc 307

                                                                       
Query: 387 ttgatctggaaagacttgtattagctgggggtcctattgggctcatgcaggcatgccttg 446
           ||||||||||||| ||||||||||||| ||| |||||||| || ||||||||||||||||
Sbjct: 308 ttgatctggaaaggcttgtattagctgcgggccctattggccttatgcaggcatgccttg 367

                                                         
Query: 447 atgttgttcttccttatgttcgacagagggagcaattcgggcgtcc 492
           ||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 368 atgttgtacttccatatgttcgacagagggagcaattcgggcgtcc 413
to top
>gb|BT016848.1| Zea mays clone Contig681 mRNA sequence
          Length = 855

 Score =  432 bits (218), Expect = e-118
 Identities = 329/366 (89%)
 Strand = Plus / Minus

                                                                       
Query: 127 gaataagatgtggtgcacaaatggtccatctgctcagacattggttgtttacgcgaaaac 186
           |||||||||||||||||| ||||| || |||||||||||| ||||||||||||| |||||
Sbjct: 855 gaataagatgtggtgcaccaatggcccgtctgctcagacactggttgtttacgcaaaaac 796

                                                                       
Query: 187 agatataactgctggatcgaaaggaataactgcattcataattgagaaggggatgccagg 246
           |||| || |||| || || ||||||||||||||||||||||| ||||| |||||||| ||
Sbjct: 795 agatctagctgcagggtcaaaaggaataactgcattcataatcgagaaagggatgcccgg 736

                                                                       
Query: 247 gttcagtactgcacagaagttggacaaacttggcatgcgaggaagtgacacatgtgagct 306
           |||||||||||| |||||||||||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 735 gttcagtactgctcagaagttggacaaacttggcatgagaggaagcgacacgtgtgagct 676

                                                                       
Query: 307 tgtctttgagaactgctttgtgcctcgagagaatgttcttggtgaagaaggaaaaggtgt 366
           ||| ||||||||||||||||||||  | || ||||| || ||||||||||| ||||||||
Sbjct: 675 tgtttttgagaactgctttgtgccatgcgaaaatgtcctcggtgaagaaggcaaaggtgt 616

                                                                       
Query: 367 ttatgtcatgatgtctggtcttgatctggaaagacttgtattagctgggggtcctattgg 426
           ||||||||||||||| || |||||||||||||| ||||||||||||| ||| ||||||||
Sbjct: 615 ttatgtcatgatgtcagggcttgatctggaaaggcttgtattagctgcgggccctattgg 556

                                                                       
Query: 427 gctcatgcaggcatgccttgatgttgttcttccttatgttcgacagagggagcaattcgg 486
            || ||||||||||||||||||| ||| ||||| |||||||| |||||||||||||||||
Sbjct: 555 ccttatgcaggcatgccttgatgctgtacttccatatgttcgccagagggagcaattcgg 496

                 
Query: 487 gcgtcc 492
            |||||
Sbjct: 495 ccgtcc 490
to top
>emb|AJ278988.1|STU278988 Solanum tuberosum partial mRNA for isovaleryl-CoA dehydrogenase
           (ivd2 gene)
          Length = 1415

 Score =  226 bits (114), Expect = 5e-56
 Identities = 327/398 (82%)
 Strand = Plus / Plus

                                                                       
Query: 5   ccaaagctaatcagtggggaccatattggggcattggcaatgagtgaaccaaactctggc 64
           ||||||||||||||||| || ||| | |||||  | || |||||||||||  |  |||| 
Sbjct: 394 ccaaagctaatcagtggtgagcatgtgggggctctagctatgagtgaacctgatgctgga 453

                                                                       
Query: 65  tctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggcggctatgtcattaat 124
           || |||||||| || |||||||||||||||||    || || || || |||||  | |||
Sbjct: 454 tcagatgttgttagcatgaagtgcaaagctgaccgtgttgagggtggttatgttctgaat 513

                                                                       
Query: 125 gggaataagatgtggtgcacaaatggtccatctgctcagacattggttgtttacgcgaaa 184
           || || || ||||||||||||||||||||| | ||||||||  |||||||||| || |||
Sbjct: 514 ggaaacaaaatgtggtgcacaaatggtccaacggctcagacgctggttgtttatgcaaaa 573

                                                                       
Query: 185 acagatataactgctggatcgaaaggaataactgcattcataattgagaaggggatgcca 244
           |||||| | || ||| | || |||||||| || |||||||| || |||||||| ||| ||
Sbjct: 574 acagatgtcacagctagttcaaaaggaatcacagcattcattatcgagaagggaatgaca 633

                                                                       
Query: 245 gggttcagtactgcacagaagttggacaaacttggcatgcgaggaagtgacacatgtgag 304
           || |||  |||||| ||||| || ||||||||||| ||||||||||||||||||||||||
Sbjct: 634 ggattctctactgcccagaaattagacaaacttgggatgcgaggaagtgacacatgtgag 693

                                                                       
Query: 305 cttgtctttgagaactgctttgtgcctcgagagaatgttcttggtgaagaaggaaaaggt 364
           ||||| ||||||||||| || || |||  ||| |||||||| ||  ||| ||||||||| 
Sbjct: 694 cttgtgtttgagaactgtttcgttcctgaagaaaatgttctggggcaagtaggaaaagga 753

                                                 
Query: 365 gtttatgtcatgatgtctggtcttgatctggaaagact 402
           ||||||||| ||||||| || || ||||||||||||||
Sbjct: 754 gtttatgtcctgatgtcggggctcgatctggaaagact 791
to top
>emb|AJ010945.1|PSA010945 Pisum sativum mRNA for Isovaleryl-CoA dehydrogenase/auxin binding
           protein (abp44/ivdh gene)
          Length = 1559

 Score =  226 bits (114), Expect = 5e-56
 Identities = 348/426 (81%)
 Strand = Plus / Plus

                                                                       
Query: 38  ttggcaatgagtgaaccaaactctggctctgatgttgtcagtatgaagtgcaaagctgag 97
           ||||| ||||||||||| || ||||| |||||||||||| | ||||| ||||| ||||| 
Sbjct: 552 ttggcgatgagtgaacccaattctgggtctgatgttgtcggcatgaaatgcaaggctgat 611

                                                                       
Query: 98  aaagtagatggcggctatgtcattaatgggaataagatgtggtgcacaaatggtccatct 157
              ||||| || || |||||  ||||||| || ||||||||||| || |||||  |   |
Sbjct: 612 cgtgtagacggaggatatgtacttaatggtaacaagatgtggtgtactaatgggaccgtt 671

                                                                       
Query: 158 gctcagacattggttgtttacgcgaaaacagatataactgctggatcgaaaggaataact 217
           ||||| ||||| ||||| || || |||||||| ||||| || || || |||||||| |||
Sbjct: 672 gctcaaacattagttgtctatgcaaaaacagacataacagcagggtcaaaaggaatcact 731

                                                                       
Query: 218 gcattcataattgagaaggggatgccagggttcagtactgcacagaagttggacaaactt 277
           |||||||| || |||||||| ||||| || ||||||||||| ||||| ||||| ||||| 
Sbjct: 732 gcattcatcatcgagaagggaatgcctggattcagtactgcgcagaaattggataaacta 791

                                                                       
Query: 278 ggcatgcgaggaagtgacacatgtgagcttgtctttgagaactgctttgtgcctcgagag 337
           || |||||||||||||| ||||||||||||||||| ||||| |||||||| ||    || 
Sbjct: 792 gggatgcgaggaagtgatacatgtgagcttgtcttcgagaattgctttgttccagacgaa 851

                                                                       
Query: 338 aatgttcttggtgaagaaggaaaaggtgtttatgtcatgatgtctggtcttgatctggaa 397
           |||||||||||  ||||||||||||| || |||||||||||||| ||  | ||| |||||
Sbjct: 852 aatgttcttgggaaagaaggaaaaggagtctatgtcatgatgtcggggttggatttggaa 911

                                                                       
Query: 398 agacttgtattagctgggggtcctattgggctcatgcaggcatgccttgatgttgttctt 457
           || ||||| ||| | || |||||  ||||  | ||||||||||| || |||||||| |||
Sbjct: 912 aggcttgttttatcaggtggtccccttggtattatgcaggcatgtctcgatgttgtcctt 971

                 
Query: 458 ccttat 463
           ||||||
Sbjct: 972 ccttat 977
to top
>ref|NM_114399.3| Arabidopsis thaliana IVD (ISOVALERYL-COA-DEHYDROGENASE) AT3G45300
            (IVD) mRNA, complete cds
          Length = 2014

 Score =  190 bits (96), Expect = 3e-45
 Identities = 393/492 (79%)
 Strand = Plus / Plus

                                                                        
Query: 1    tttgccaaagctaatcagtggggaccatattggggcattggcaatgagtgaaccaaactc 60
            |||||||||||| |||||||| || ||| |||| ||  | |||||||||||||| ||  |
Sbjct: 614  tttgccaaagcttatcagtggagagcatgttggtgctcttgcaatgagtgaacctaatgc 673

                                                                        
Query: 61   tggctctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggcggctatgtcat 120
            ||| || ||||||||  | ||||| ||||| |||||||| |||||||| || ||| |  |
Sbjct: 674  tggttcagatgttgttggcatgaaatgcaaggctgagaaggtagatggtggttatatact 733

                                                                        
Query: 121  taatgggaataagatgtggtgcacaaatggtccatctgctcagacattggttgtttacgc 180
             ||||| || |||||||||||||| ||||||||||||||| | ||| |||||||||||||
Sbjct: 734  aaatggcaacaagatgtggtgcactaatggtccatctgctgaaacactggttgtttacgc 793

                                                                        
Query: 181  gaaaacagatataactgctggatcgaaaggaataactgcattcataattgagaaggggat 240
            |||||| |||| ||  || || || |||||||| || || ||||| || ||||| || ||
Sbjct: 794  gaaaactgatacaaaagcaggttccaaaggaatcacggctttcatcatagagaaaggaat 853

                                                                        
Query: 241  gccagggttcagtactgcacagaagttggacaaacttggcatgcgaggaagtgacacatg 300
            | | || ||||||||||| ||||| ||||||||||| || ||||| ||||| || || ||
Sbjct: 854  gaccggattcagtactgctcagaaattggacaaactaggaatgcggggaagcgatacgtg 913

                                                                        
Query: 301  tgagcttgtctttgagaactgctttgtgcctcgagagaatgttcttggtgaagaaggaaa 360
            ||||||||| |||||||| ||||| || ||    || ||| |||| |   | ||||||||
Sbjct: 914  tgagcttgtttttgagaattgcttcgttccagaggaaaatattctagacaaggaaggaaa 973

                                                                        
Query: 361  aggtgtttatgtcatgatgtctggtcttgatctggaaagacttgtattagctgggggtcc 420
            ||| || |||||  ||||||| ||||| ||| |||| |||||||| ||||| |  || ||
Sbjct: 974  aggagtgtatgttctgatgtcaggtctggatttggagagacttgttttagcagctgggcc 1033

                                                                        
Query: 421  tattgggctcatgcaggcatgccttgatgttgttcttccttatgttcgacagagggagca 480
              | ||| |||||||||||||||| ||   ||||||||| ||| |||| ||||| || ||
Sbjct: 1034 cttagggatcatgcaggcatgcctcgacaatgttcttccctatattcgccagagagaaca 1093

                        
Query: 481  attcgggcgtcc 492
            ||| || |||||
Sbjct: 1094 atttggtcgtcc 1105
to top
>emb|Y12695.1|ATISOVAL A.thaliana mRNA for isovaleryl-CoA dehydrogenase
          Length = 1321

 Score =  190 bits (96), Expect = 3e-45
 Identities = 393/492 (79%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttgccaaagctaatcagtggggaccatattggggcattggcaatgagtgaaccaaactc 60
           |||||||||||| |||||||| || ||| |||| ||  | |||||||||||||| ||  |
Sbjct: 464 tttgccaaagcttatcagtggagagcatgttggtgctcttgcaatgagtgaacctaatgc 523

                                                                       
Query: 61  tggctctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggcggctatgtcat 120
           ||| || ||||||||  | ||||| ||||| |||||||| |||||||| || ||| |  |
Sbjct: 524 tggttcagatgttgttggcatgaaatgcaaggctgagaaggtagatggtggttatatact 583

                                                                       
Query: 121 taatgggaataagatgtggtgcacaaatggtccatctgctcagacattggttgtttacgc 180
            ||||| || |||||||||||||| ||||||||||||||| | ||| |||||||||||||
Sbjct: 584 aaatggcaacaagatgtggtgcactaatggtccatctgctgaaacactggttgtttacgc 643

                                                                       
Query: 181 gaaaacagatataactgctggatcgaaaggaataactgcattcataattgagaaggggat 240
           |||||| |||| ||  || || || |||||||| || || ||||| || ||||| || ||
Sbjct: 644 gaaaactgatacaaaagcaggttccaaaggaatcacggctttcatcatagagaaaggaat 703

                                                                       
Query: 241 gccagggttcagtactgcacagaagttggacaaacttggcatgcgaggaagtgacacatg 300
           | | || ||||||||||| ||||| ||||||||||| || ||||| ||||| || || ||
Sbjct: 704 gaccggattcagtactgctcagaaattggacaaactaggaatgcggggaagcgatacgtg 763

                                                                       
Query: 301 tgagcttgtctttgagaactgctttgtgcctcgagagaatgttcttggtgaagaaggaaa 360
           ||||||||| |||||||| ||||| || ||    || ||| |||| |   | ||||||||
Sbjct: 764 tgagcttgtttttgagaattgcttcgttccagaggaaaatattctagacaaggaaggaaa 823

                                                                       
Query: 361 aggtgtttatgtcatgatgtctggtcttgatctggaaagacttgtattagctgggggtcc 420
           ||| || |||||  ||||||| ||||| ||| |||| |||||||| ||||| |  || ||
Sbjct: 824 aggagtgtatgttctgatgtcaggtctggatttggagagacttgttttagcagctgggcc 883

                                                                       
Query: 421 tattgggctcatgcaggcatgccttgatgttgttcttccttatgttcgacagagggagca 480
             | ||| |||||||||||||||| ||   ||||||||| ||| |||| ||||| || ||
Sbjct: 884 cttagggatcatgcaggcatgcctcgacaatgttcttccctatattcgccagagagaaca 943

                       
Query: 481 attcgggcgtcc 492
           ||| || |||||
Sbjct: 944 atttggtcgtcc 955
to top
>gb|AY128799.1| Arabidopsis thaliana isovaleryl-CoA-dehydrogenase precursor IVD
           (At3g45300) mRNA, complete cds
          Length = 1416

 Score =  182 bits (92), Expect = 7e-43
 Identities = 392/492 (79%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttgccaaagctaatcagtggggaccatattggggcattggcaatgagtgaaccaaactc 60
           |||||||||||| |||||||| || ||| |||| ||  | |||||||||||||| ||  |
Sbjct: 414 tttgccaaagcttatcagtggagagcatgttggtgctcttgcaatgagtgaacctaatgc 473

                                                                       
Query: 61  tggctctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggcggctatgtcat 120
           ||| || ||||||||  | ||||| ||||| |||||||| |||||||| || ||| |  |
Sbjct: 474 tggttcagatgttgttggcatgaaatgcaaggctgagaaggtagatggtggttatatact 533

                                                                       
Query: 121 taatgggaataagatgtggtgcacaaatggtccatctgctcagacattggttgtttacgc 180
            ||||| || |||||||||||||| ||||||||||||||| | ||| |||||||||||||
Sbjct: 534 aaatggcaacaagatgtggtgcactaatggtccatctgctgaaacactggttgtttacgc 593

                                                                       
Query: 181 gaaaacagatataactgctggatcgaaaggaataactgcattcataattgagaaggggat 240
           |||||| |||| ||  || || || |||||||| || || ||||| || ||||| || ||
Sbjct: 594 gaaaactgatacaaaagcaggttccaaaggaatcacggctttcatcatagagaaaggaat 653

                                                                       
Query: 241 gccagggttcagtactgcacagaagttggacaaacttggcatgcgaggaagtgacacatg 300
           | | || ||||||||||| ||||| ||||||||||| || ||||| ||||| || || ||
Sbjct: 654 gaccggattcagtactgctcagaaattggacaaactaggaatgcggggaagcgatacgtg 713

                                                                       
Query: 301 tgagcttgtctttgagaactgctttgtgcctcgagagaatgttcttggtgaagaaggaaa 360
           ||||||||| |||||||| ||||| || ||    || ||| |||| |   | ||||||||
Sbjct: 714 tgagcttgtttttgagaattgcttcgttccagaggaaaatattctagacaaggaaggaaa 773

                                                                       
Query: 361 aggtgtttatgtcatgatgtctggtcttgatctggaaagacttgtattagctgggggtcc 420
           ||| || |||||  ||||||| ||||| ||| |||| |||||||| ||||| |  || ||
Sbjct: 774 aggagtgtatgttctgatgtcaggtctggatttggagagacttgttttagcagctgggcc 833

                                                                       
Query: 421 tattgggctcatgcaggcatgccttgatgttgttcttccttatgttcgacagagggagca 480
             | ||| || ||||||||||||| ||   ||||||||| ||| |||| ||||| || ||
Sbjct: 834 cttagggatcgtgcaggcatgcctcgacaatgttcttccctatattcgccagagagaaca 893

                       
Query: 481 attcgggcgtcc 492
           ||| || |||||
Sbjct: 894 atttggtcgtcc 905
to top
>gb|AY062567.1| Arabidopsis thaliana isovaleryl-CoA-dehydrogenase precursor (IVD)
           (F18N11.6) mRNA, complete cds
          Length = 1477

 Score =  182 bits (92), Expect = 7e-43
 Identities = 392/492 (79%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttgccaaagctaatcagtggggaccatattggggcattggcaatgagtgaaccaaactc 60
           |||||||||||| |||||||| || ||| |||| ||  | |||||||||||||| ||  |
Sbjct: 444 tttgccaaagcttatcagtggagagcatgttggtgctcttgcaatgagtgaacctaatgc 503

                                                                       
Query: 61  tggctctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggcggctatgtcat 120
           ||| || ||||||||  | ||||| ||||| |||||||| |||||||| || ||| |  |
Sbjct: 504 tggttcagatgttgttggcatgaaatgcaaggctgagaaggtagatggtggttatatact 563

                                                                       
Query: 121 taatgggaataagatgtggtgcacaaatggtccatctgctcagacattggttgtttacgc 180
            ||||| || |||||||||||||| ||||||||||||||| | ||| |||||||||||||
Sbjct: 564 aaatggcaacaagatgtggtgcactaatggtccatctgctgaaacactggttgtttacgc 623

                                                                       
Query: 181 gaaaacagatataactgctggatcgaaaggaataactgcattcataattgagaaggggat 240
           |||||| |||| ||  || || || |||||||| || || ||||| || ||||| || ||
Sbjct: 624 gaaaactgatacaaaagcaggttccaaaggaatcacggctttcatcatagagaaaggaat 683

                                                                       
Query: 241 gccagggttcagtactgcacagaagttggacaaacttggcatgcgaggaagtgacacatg 300
           | | || ||||||||||| ||||| ||||||||||| || ||||| ||||| || || ||
Sbjct: 684 gaccggattcagtactgctcagaaattggacaaactaggaatgcggggaagcgatacgtg 743

                                                                       
Query: 301 tgagcttgtctttgagaactgctttgtgcctcgagagaatgttcttggtgaagaaggaaa 360
           ||||||||| |||||||| ||||| || ||    || ||| |||| |   | ||||||||
Sbjct: 744 tgagcttgtttttgagaattgcttcgttccagaggaaaatattctagacaaggaaggaaa 803

                                                                       
Query: 361 aggtgtttatgtcatgatgtctggtcttgatctggaaagacttgtattagctgggggtcc 420
           ||| || |||||  ||||||| ||||| ||| |||| |||||||| ||||| |  || ||
Sbjct: 804 aggagtgtatgttctgatgtcaggtctggatttggagagacttgttttagcagctgggcc 863

                                                                       
Query: 421 tattgggctcatgcaggcatgccttgatgttgttcttccttatgttcgacagagggagca 480
             | ||| || ||||||||||||| ||   ||||||||| ||| |||| ||||| || ||
Sbjct: 864 cttagggatcgtgcaggcatgcctcgacaatgttcttccctatattcgccagagagaaca 923

                       
Query: 481 attcgggcgtcc 492
           ||| || |||||
Sbjct: 924 atttggtcgtcc 935
to top
>gb|AF160729.1|AF160729 Arabidopsis thaliana isovaleryl-CoA-dehydrogenase precursor (IVD)
            mRNA, complete cds; nuclear gene for mitochondrial
            product
          Length = 1547

 Score =  182 bits (92), Expect = 7e-43
 Identities = 356/444 (80%)
 Strand = Plus / Plus

                                                                        
Query: 1    tttgccaaagctaatcagtggggaccatattggggcattggcaatgagtgaaccaaactc 60
            |||||||||||| |||||||| || ||| |||| ||  | |||||||||||||| ||  |
Sbjct: 626  tttgccaaagcttatcagtggagagcatgttggtgctcttgcaatgagtgaacctaatgc 685

                                                                        
Query: 61   tggctctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggcggctatgtcat 120
            ||| || ||||||||  | ||||| ||||| |||||||| |||||||| || ||| |  |
Sbjct: 686  tggttcagatgttgttggcatgaaatgcaaggctgagaaggtagatggtggttatatact 745

                                                                        
Query: 121  taatgggaataagatgtggtgcacaaatggtccatctgctcagacattggttgtttacgc 180
             ||||| || |||||||||||||| ||||||||||||||| | ||| |||||||||||||
Sbjct: 746  aaatggcaacaagatgtggtgcactaatggtccatctgctgaaacactggttgtttacgc 805

                                                                        
Query: 181  gaaaacagatataactgctggatcgaaaggaataactgcattcataattgagaaggggat 240
            |||||| |||| ||  || || || |||||||| || || ||||| || ||||| || ||
Sbjct: 806  gaaaactgatacaaaagcaggttccaaaggaatcacggctttcatcatagagaaaggaat 865

                                                                        
Query: 241  gccagggttcagtactgcacagaagttggacaaacttggcatgcgaggaagtgacacatg 300
            | | || ||||||||||| ||||| ||||||||||| || ||||| ||||| || || ||
Sbjct: 866  gaccggattcagtactgctcagaaattggacaaactaggaatgcggggaagcgatacgtg 925

                                                                        
Query: 301  tgagcttgtctttgagaactgctttgtgcctcgagagaatgttcttggtgaagaaggaaa 360
            ||||||||| |||||||| ||||| || ||    || ||| |||| |   | ||||||||
Sbjct: 926  tgagcttgtttttgagaattgcttcgttccagaggaaaatattctagacaaggaaggaaa 985

                                                                        
Query: 361  aggtgtttatgtcatgatgtctggtcttgatctggaaagacttgtattagctgggggtcc 420
            ||| || |||||  ||||||| ||||| ||| |||| |||||||| ||||| |  || ||
Sbjct: 986  aggagtgtatgttctgatgtcaggtctggatttggagagacttgttttagcagctgggcc 1045

                                    
Query: 421  tattgggctcatgcaggcatgcct 444
              | ||| ||||||||||||||||
Sbjct: 1046 cttagggatcatgcaggcatgcct 1069
to top
>gb|AY087286.1| Arabidopsis thaliana clone 33674 mRNA, complete sequence
          Length = 1514

 Score =  182 bits (92), Expect = 7e-43
 Identities = 356/444 (80%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttgccaaagctaatcagtggggaccatattggggcattggcaatgagtgaaccaaactc 60
           |||||||||||| |||||||| || ||| |||| ||  | |||||||||||||| ||  |
Sbjct: 540 tttgccaaagcttatcagtggagagcatgttggtgctcttgcaatgagtgaacctaatgc 599

                                                                       
Query: 61  tggctctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggcggctatgtcat 120
           ||| || ||||||||  | ||||| ||||| |||||||| |||||||| || ||| |  |
Sbjct: 600 tggttcagatgttgttggcatgaaatgcaaggctgagaaggtagatggtggttatatact 659

                                                                       
Query: 121 taatgggaataagatgtggtgcacaaatggtccatctgctcagacattggttgtttacgc 180
            ||||| || |||||||||||||| ||||||||||||||| | ||| |||||||||||||
Sbjct: 660 aaatggcaacaagatgtggtgcactaatggtccatctgctgaaacactggttgtttacgc 719

                                                                       
Query: 181 gaaaacagatataactgctggatcgaaaggaataactgcattcataattgagaaggggat 240
           |||||| |||| ||  || || || |||||||| || || ||||| || ||||| || ||
Sbjct: 720 gaaaactgatacaaaagcaggttccaaaggaatcacggctttcatcatagagaaaggaat 779

                                                                       
Query: 241 gccagggttcagtactgcacagaagttggacaaacttggcatgcgaggaagtgacacatg 300
           | | || ||||||||||| ||||| ||||||||||| || ||||| ||||| || || ||
Sbjct: 780 gaccggattcagtactgctcagaaattggacaaactaggaatgcggggaagcgatacgtg 839

                                                                       
Query: 301 tgagcttgtctttgagaactgctttgtgcctcgagagaatgttcttggtgaagaaggaaa 360
           ||||||||| |||||||| ||||| || ||    || ||| |||| |   | ||||||||
Sbjct: 840 tgagcttgtttttgagaattgcttcgttccagaggaaaatattctagacaaggaaggaaa 899

                                                                       
Query: 361 aggtgtttatgtcatgatgtctggtcttgatctggaaagacttgtattagctgggggtcc 420
           ||| || |||||  ||||||| ||||| ||| |||| |||||||| ||||| |  || ||
Sbjct: 900 aggagtgtatgttctgatgtcaggtctggatttggagagacttgttttagcagctgggcc 959

                                   
Query: 421 tattgggctcatgcaggcatgcct 444
             | ||| ||||||||||||||||
Sbjct: 960 cttagggatcatgcaggcatgcct 983
to top
>gb|AC134931.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0079L11, complete sequence
          Length = 124104

 Score =  159 bits (80), Expect = 1e-35
 Identities = 104/112 (92%)
 Strand = Plus / Minus

                                                                         
Query: 60    ctggctctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggcggctatgtca 119
             |||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 73924 ctggttctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggtggttatgtca 73865

                                                                 
Query: 120   ttaatgggaataagatgtggtgcacaaatggtccatctgctcagacattggt 171
             |||| |||||||||||||||||||| || || ||||||||||||||| ||||
Sbjct: 73864 ttaacgggaataagatgtggtgcaccaacgggccatctgctcagacactggt 73813



 Score =  127 bits (64), Expect = 4e-26
 Identities = 115/132 (87%)
 Strand = Plus / Minus

                                                                         
Query: 361   aggtgtttatgtcatgatgtctggtcttgatctggaaagacttgtattagctgggggtcc 420
             ||||||||||||||||||||| || |||||||| ||||||||||| |||||||  |||||
Sbjct: 72869 aggtgtttatgtcatgatgtcagggcttgatctagaaagacttgtgttagctgcaggtcc 72810

                                                                         
Query: 421   tattgggctcatgcaggcatgccttgatgttgttcttccttatgttcgacagagggagca 480
             ||| || |||||||| |||||||||||||| | | ||||||||||||| || || |||||
Sbjct: 72809 tatcggcctcatgcaagcatgccttgatgtagctgttccttatgttcgccaaagagagca 72750

                         
Query: 481   attcgggcgtcc 492
             ||| || |||||
Sbjct: 72749 atttggccgtcc 72738



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 72/80 (90%)
 Strand = Plus / Minus

                                                                         
Query: 169   ggttgtttacgcgaaaacagatataactgctggatcgaaaggaataactgcattcataat 228
             |||||| || || |||||||||||| |||||||||| ||||||||||| || ||||||||
Sbjct: 73556 ggttgtgtatgcaaaaacagatatagctgctggatcaaaaggaataaccgcgttcataat 73497

                                 
Query: 229   tgagaaggggatgccagggt 248
             ||||||||||||||| ||||
Sbjct: 73496 tgagaaggggatgcccgggt 73477



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 50/52 (96%)
 Strand = Plus / Minus

                                                                 
Query: 246   ggttcagtactgcacagaagttggacaaacttggcatgcgaggaagtgacac 297
             |||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 73258 ggttcagtactgcacagaagttggacaagcttggcatgagaggaagtgacac 73207



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                  
Query: 7     aaagctaatcagtggggaccatattggggcattggcaatgagtgaaccaaact 59
             |||||||||||||||||| ||| | ||||||||||| ||||| ||||| ||||
Sbjct: 74069 aaagctaatcagtggggagcatgtgggggcattggcgatgagcgaacccaact 74017
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  159 bits (80), Expect = 1e-35
 Identities = 104/112 (92%)
 Strand = Plus / Minus

                                                                           
Query: 60      ctggctctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggcggctatgtca 119
               |||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 1412262 ctggttctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggtggttatgtca 1412203

                                                                   
Query: 120     ttaatgggaataagatgtggtgcacaaatggtccatctgctcagacattggt 171
               |||| |||||||||||||||||||| || || ||||||||||||||| ||||
Sbjct: 1412202 ttaacgggaataagatgtggtgcaccaacgggccatctgctcagacactggt 1412151



 Score =  127 bits (64), Expect = 4e-26
 Identities = 115/132 (87%)
 Strand = Plus / Minus

                                                                           
Query: 361     aggtgtttatgtcatgatgtctggtcttgatctggaaagacttgtattagctgggggtcc 420
               ||||||||||||||||||||| || |||||||| ||||||||||| |||||||  |||||
Sbjct: 1411207 aggtgtttatgtcatgatgtcagggcttgatctagaaagacttgtgttagctgcaggtcc 1411148

                                                                           
Query: 421     tattgggctcatgcaggcatgccttgatgttgttcttccttatgttcgacagagggagca 480
               ||| || |||||||| |||||||||||||| | | ||||||||||||| || || |||||
Sbjct: 1411147 tatcggcctcatgcaagcatgccttgatgtagctgttccttatgttcgccaaagagagca 1411088

                           
Query: 481     attcgggcgtcc 492
               ||| || |||||
Sbjct: 1411087 atttggccgtcc 1411076



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 72/80 (90%)
 Strand = Plus / Minus

                                                                           
Query: 169     ggttgtttacgcgaaaacagatataactgctggatcgaaaggaataactgcattcataat 228
               |||||| || || |||||||||||| |||||||||| ||||||||||| || ||||||||
Sbjct: 1411894 ggttgtgtatgcaaaaacagatatagctgctggatcaaaaggaataaccgcgttcataat 1411835

                                   
Query: 229     tgagaaggggatgccagggt 248
               ||||||||||||||| ||||
Sbjct: 1411834 tgagaaggggatgcccgggt 1411815



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 50/52 (96%)
 Strand = Plus / Minus

                                                                   
Query: 246     ggttcagtactgcacagaagttggacaaacttggcatgcgaggaagtgacac 297
               |||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 1411596 ggttcagtactgcacagaagttggacaagcttggcatgagaggaagtgacac 1411545



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                    
Query: 7       aaagctaatcagtggggaccatattggggcattggcaatgagtgaaccaaact 59
               |||||||||||||||||| ||| | ||||||||||| ||||| ||||| ||||
Sbjct: 1412407 aaagctaatcagtggggagcatgtgggggcattggcgatgagcgaacccaact 1412355
to top
>gb|AC129720.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683F12,
            complete sequence
          Length = 144455

 Score =  159 bits (80), Expect = 1e-35
 Identities = 104/112 (92%)
 Strand = Plus / Minus

                                                                        
Query: 60   ctggctctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggcggctatgtca 119
            |||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 6342 ctggttctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggtggttatgtca 6283

                                                                
Query: 120  ttaatgggaataagatgtggtgcacaaatggtccatctgctcagacattggt 171
            |||| |||||||||||||||||||| || || ||||||||||||||| ||||
Sbjct: 6282 ttaacgggaataagatgtggtgcaccaacgggccatctgctcagacactggt 6231



 Score =  127 bits (64), Expect = 4e-26
 Identities = 115/132 (87%)
 Strand = Plus / Minus

                                                                        
Query: 361  aggtgtttatgtcatgatgtctggtcttgatctggaaagacttgtattagctgggggtcc 420
            ||||||||||||||||||||| || |||||||| ||||||||||| |||||||  |||||
Sbjct: 5287 aggtgtttatgtcatgatgtcagggcttgatctagaaagacttgtgttagctgcaggtcc 5228

                                                                        
Query: 421  tattgggctcatgcaggcatgccttgatgttgttcttccttatgttcgacagagggagca 480
            ||| || |||||||| |||||||||||||| | | ||||||||||||| || || |||||
Sbjct: 5227 tatcggcctcatgcaagcatgccttgatgtagctgttccttatgttcgccaaagagagca 5168

                        
Query: 481  attcgggcgtcc 492
            ||| || |||||
Sbjct: 5167 atttggccgtcc 5156



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 72/80 (90%)
 Strand = Plus / Minus

                                                                        
Query: 169  ggttgtttacgcgaaaacagatataactgctggatcgaaaggaataactgcattcataat 228
            |||||| || || |||||||||||| |||||||||| ||||||||||| || ||||||||
Sbjct: 5974 ggttgtgtatgcaaaaacagatatagctgctggatcaaaaggaataaccgcgttcataat 5915

                                
Query: 229  tgagaaggggatgccagggt 248
            ||||||||||||||| ||||
Sbjct: 5914 tgagaaggggatgcccgggt 5895



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 50/52 (96%)
 Strand = Plus / Minus

                                                                
Query: 246  ggttcagtactgcacagaagttggacaaacttggcatgcgaggaagtgacac 297
            |||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 5676 ggttcagtactgcacagaagttggacaagcttggcatgagaggaagtgacac 5625



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                 
Query: 7    aaagctaatcagtggggaccatattggggcattggcaatgagtgaaccaaact 59
            |||||||||||||||||| ||| | ||||||||||| ||||| ||||| ||||
Sbjct: 6487 aaagctaatcagtggggagcatgtgggggcattggcgatgagcgaacccaact 6435
to top
>emb|AJ278987.1|STU278987 Solanum tuberosum mRNA for isovaleryl-CoA dehydrogenase (ivd1 gene)
          Length = 1406

 Score =  133 bits (67), Expect = 6e-28
 Identities = 376/479 (78%)
 Strand = Plus / Plus

                                                                       
Query: 5   ccaaagctaatcagtggggaccatattggggcattggcaatgagtgaaccaaactctggc 64
           |||||||| || |||||||| || ||||||||  | || ||||||||||||||  |||| 
Sbjct: 469 ccaaagcttataagtggggatcacattggggctctagccatgagtgaaccaaatgctggg 528

                                                                       
Query: 65  tctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggcggctatgtcattaat 124
           || |||||||| || ||||||||   ||| ||    || ||||| ||||||||  | |||
Sbjct: 529 tcagatgttgttagcatgaagtgtcgagccgatcgtgtcgatggtggctatgttttaaat 588

                                                                       
Query: 125 gggaataagatgtggtgcacaaatggtccatctgctcagacattggttgtttacgcgaaa 184
           || ||||| ||||||||||| ||||||||    ||| | || ||| ||||||| || |||
Sbjct: 589 ggaaataaaatgtggtgcaccaatggtcctgtcgctaatactttgattgtttatgcaaaa 648

                                                                       
Query: 185 acagatataactgctggatcgaaaggaataactgcattcataattgagaaggggatgcca 244
           || ||||  |||||||| || |||||||| || ||||| || || || || |  ||||||
Sbjct: 649 acggatacgactgctggttcaaaaggaattacagcatttatcatcgaaaaagaaatgcca 708

                                                                       
Query: 245 gggttcagtactgcacagaagttggacaaacttggcatgcgaggaagtgacacatgtgag 304
           || |||   ||||||||||| |||||||||||||| ||||||||||| || || ||||| 
Sbjct: 709 ggattctcaactgcacagaaattggacaaacttgggatgcgaggaagcgatacgtgtgaa 768

                                                                       
Query: 305 cttgtctttgagaactgctttgtgcctcgagagaatgttcttggtgaagaaggaaaaggt 364
           ||||| || ||||| |||||||| |||  ||| |||||||| ||  | ||||||||||| 
Sbjct: 769 cttgtattcgagaattgctttgttcctaaagaaaatgttctagggcaggaaggaaaagga 828

                                                                       
Query: 365 gtttatgtcatgatgtctggtcttgatctggaaagacttgtattagctgggggtcctatt 424
           || |||||  | ||||| || || ||| | ||| ||||||| ||||| |  || ||  ||
Sbjct: 829 gtgtatgttctaatgtcggggctagatttagaacgacttgttttagcagcaggaccagtt 888

                                                                      
Query: 425 gggctcatgcaggcatgccttgatgttgttcttccttatgttcgacagagggagcaatt 483
           ||  | |||||||||||  | ||| ||||| ||||||| |||||||| |||||||||||
Sbjct: 889 ggaataatgcaggcatgtatggatattgttattccttacgttcgacaaagggagcaatt 947
to top
>gb|AC152176.5| Medicago truncatula clone mth2-65c4, complete sequence
          Length = 161536

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 95/113 (84%)
 Strand = Plus / Minus

                                                                         
Query: 368   tatgtcatgatgtctggtcttgatctggaaagacttgtattagctgggggtcctattggg 427
             ||||||||||||||||| || ||| ||||||| ||||| ||||| |  |||||  |||| 
Sbjct: 13574 tatgtcatgatgtctgggctggatttggaaaggcttgttttagcagccggtccccttggt 13515

                                                                  
Query: 428   ctcatgcaggcatgccttgatgttgttcttccttatgttcgacagagggagca 480
              | |||||| |||| ||||||||||| ||||||||||||||||| || |||||
Sbjct: 13514 attatgcagtcatgtcttgatgttgtccttccttatgttcgacaaagagagca 13462



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                            
Query: 248   ttcagtactgcacagaagttggacaaacttggcatgcgaggaagtga 294
             ||||||||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 14415 ttcagtactgcccagaaattggataaactagggatgcgaggaagtga 14369



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 88/109 (80%)
 Strand = Plus / Minus

                                                                         
Query: 60    ctggctctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggcggctatgtca 119
             |||| |||||||||||||| ||||| || || |||||    ||||| || || |||||  
Sbjct: 14995 ctggatctgatgttgtcagcatgaaatgtaaggctgatcgtgtagacgggggatatgtac 14936

                                                              
Query: 120   ttaatgggaataagatgtggtgcacaaatggtccatctgctcagacatt 168
             |||| ||||| ||||||||||| || ||||| ||| ||||||| |||||
Sbjct: 14935 ttaacgggaacaagatgtggtgtactaatgggccaactgctcaaacatt 14887



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                         
Query: 298   atgtgagcttgtctttgagaactgctttgtgcctcgagagaatgttcttggtgaagaagg 357
             ||||||||| ||||||||||| |||||||| ||    || |||||||||||  |||||||
Sbjct: 14277 atgtgagctagtctttgagaattgctttgttccagaggaaaatgttcttgggaaagaagg 14218

                    
Query: 358   aaaaggt 364
              ||||||
Sbjct: 14217 gaaaggt 14211



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 38    ttggcaatgagtgaaccaaa 57
             ||||||||||||||||||||
Sbjct: 15101 ttggcaatgagtgaaccaaa 15082
to top
>gb|BT016182.1| Zea mays clone Contig15 mRNA sequence
          Length = 828

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                    
Query: 34  ggcattggcaatgagtgaaccaaactctggctctgatgttgtcagtatgaagtgcaa 90
           |||| |||| ||||||||||| ||||||||||||||||| ||||| |||||||||||
Sbjct: 772 ggcactggcgatgagtgaacccaactctggctctgatgtcgtcagcatgaagtgcaa 828
to top
>emb|AJ010946.1|PSA010946 Pisum sativum abp44/ivdh gene for Isovaleryl-CoA dehydrogenase/auxin
            binding protein
          Length = 3572

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 147/184 (79%)
 Strand = Plus / Plus

                                                                        
Query: 60   ctggctctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggcggctatgtca 119
            |||| |||||||||||| | ||||| ||||| |||||    ||||| || || |||||  
Sbjct: 2041 ctgggtctgatgttgtcggcatgaaatgcaaggctgatcgtgtagacggaggatatgtac 2100

                                                                        
Query: 120  ttaatgggaataagatgtggtgcacaaatggtccatctgctcagacattggttgtttacg 179
            ||||||| || ||||||||||| || |||||  |   |||||| ||||| ||||| || |
Sbjct: 2101 ttaatggtaacaagatgtggtgtactaatgggaccgttgctcaaacattagttgtctatg 2160

                                                                        
Query: 180  cgaaaacagatataactgctggatcgaaaggaataactgcattcataattgagaagggga 239
            | |||||||| ||||| || || || |||||||| ||||||||||| || |||||||| |
Sbjct: 2161 caaaaacagacataacagcagggtcaaaaggaatcactgcattcatcatcgagaagggaa 2220

                
Query: 240  tgcc 243
            ||||
Sbjct: 2221 tgcc 2224



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 57/67 (85%)
 Strand = Plus / Plus

                                                                        
Query: 298  atgtgagcttgtctttgagaactgctttgtgcctcgagagaatgttcttggtgaagaagg 357
            ||||||||||||||| ||||| |||||||| ||    || |||||||||||  |||||||
Sbjct: 2489 atgtgagcttgtcttcgagaattgctttgttccagacgaaaatgttcttgggaaagaagg 2548

                   
Query: 358  aaaaggt 364
            |||||||
Sbjct: 2549 aaaaggt 2555



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                           
Query: 248  ttcagtactgcacagaagttggacaaacttggcatgcgaggaagtga 294
            ||||||||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 2344 ttcagtactgcgcagaaattggataaactagggatgcgaggaagtga 2390



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 78/96 (81%)
 Strand = Plus / Plus

                                                                        
Query: 368  tatgtcatgatgtctggtcttgatctggaaagacttgtattagctgggggtcctattggg 427
            |||||||||||||| ||  | ||| ||||||| ||||| ||| | || |||||  |||| 
Sbjct: 2645 tatgtcatgatgtcggggttggatttggaaaggcttgttttatcaggtggtccccttggt 2704

                                                
Query: 428  ctcatgcaggcatgccttgatgttgttcttccttat 463
             | ||||||||||| || |||||||| |||||||||
Sbjct: 2705 attatgcaggcatgtctcgatgttgtccttccttat 2740
to top
>emb|AL132953.2|ATF18N11 Arabidopsis thaliana DNA chromosome 3, BAC clone F18N11
          Length = 91274

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 69/81 (85%)
 Strand = Plus / Minus

                                                                         
Query: 80    atgaagtgcaaagctgagaaagtagatggcggctatgtcattaatgggaataagatgtgg 139
             ||||| ||||| |||||||| |||||||| || ||| |  | ||||| || |||||||||
Sbjct: 54043 atgaaatgcaaggctgagaaggtagatggtggttatatactaaatggcaacaagatgtgg 53984

                                  
Query: 140   tgcacaaatggtccatctgct 160
             ||||| |||||||||||||||
Sbjct: 53983 tgcactaatggtccatctgct 53963



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                         
Query: 248   ttcagtactgcacagaagttggacaaacttggcatgcgaggaag 291
             ||||||||||| ||||| ||||||||||| || ||||| |||||
Sbjct: 53664 ttcagtactgctcagaaattggacaaactaggaatgcggggaag 53621



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 94/118 (79%)
 Strand = Plus / Minus

                                                                         
Query: 375   tgatgtctggtcttgatctggaaagacttgtattagctgggggtcctattgggctcatgc 434
             ||||||| ||||| ||| |||| |||||||| ||||| |  || ||  | ||| ||||||
Sbjct: 53240 tgatgtcaggtctggatttggagagacttgttttagcagctgggcccttagggatcatgc 53181

                                                                       
Query: 435   aggcatgccttgatgttgttcttccttatgttcgacagagggagcaattcgggcgtcc 492
             |||||||||| ||   ||||||||| ||| |||| ||||| || ||||| || |||||
Sbjct: 53180 aggcatgcctcgacaatgttcttccctatattcgccagagagaacaatttggtcgtcc 53123
to top
>gb|BC106210.1| Xenopus laevis cDNA clone IMAGE:7980776, partial cds
          Length = 1734

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                       
Query: 8   aagctaatcagtggggaccatattggggcattggcaatgagtgaaccaaactctggctct 67
           ||||| ||||||||||| || ||||| ||  |||| |||||||| |||||||| ||||||
Sbjct: 440 aagctgatcagtggggagcacattggagccctggctatgagtgagccaaactccggctct 499

                
Query: 68  gatgt 72
           |||||
Sbjct: 500 gatgt 504



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 230 gagaaggggatgccagggttcagtactgcacagaagttgga 270
           |||||||| | |||||| ||||| |||||||||||| ||||
Sbjct: 665 gagaagggaacgccaggattcagcactgcacagaagctgga 705
to top
>gb|BC094479.1| Xenopus laevis cDNA clone IMAGE:7020557, partial cds
          Length = 1729

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                       
Query: 8   aagctaatcagtggggaccatattggggcattggcaatgagtgaaccaaactctggctct 67
           ||||| ||||||||||| || ||||| ||  |||| |||||||| |||||||| ||||||
Sbjct: 440 aagctgatcagtggggagcacattggagccctggctatgagtgagccaaactccggctct 499

                
Query: 68  gatgt 72
           |||||
Sbjct: 500 gatgt 504



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 230 gagaaggggatgccagggttcagtactgcacagaagttgga 270
           |||||||| | |||||| ||||| |||||||||||| ||||
Sbjct: 665 gagaagggaacgccaggattcagcactgcacagaagctgga 705
to top
>emb|CT030360.1| Xenopus tropicalis finished cDNA, clone TGas106c19
          Length = 1862

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 230 gagaaggggatgccagggttcagtactgcaca 261
           ||||||||||||||||||||||| || |||||
Sbjct: 686 gagaaggggatgccagggttcagcaccgcaca 717
to top
>ref|NM_001011380.1| Xenopus tropicalis hypothetical LOC496848 (LOC496848), mRNA
          Length = 1892

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 230 gagaaggggatgccagggttcagtactgcaca 261
           ||||||||||||||||||||||| || |||||
Sbjct: 698 gagaaggggatgccagggttcagcaccgcaca 729
to top
>gb|BC088561.1| Xenopus tropicalis hypothetical LOC496848, mRNA (cDNA clone
           MGC:97746 IMAGE:6987702), complete cds
          Length = 1892

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 230 gagaaggggatgccagggttcagtactgcaca 261
           ||||||||||||||||||||||| || |||||
Sbjct: 698 gagaaggggatgccagggttcagcaccgcaca 729
to top
>gb|AC121313.8| Mus musculus chromosome 14, clone RP24-395N22, complete sequence
          Length = 131620

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 368   tatgtcatgatgtctggtcttg 389
             ||||||||||||||||||||||
Sbjct: 55253 tatgtcatgatgtctggtcttg 55274
to top
>gb|AC154508.2| Mus musculus BAC clone RP24-96P6 from chromosome 16, complete sequence
          Length = 214625

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 287   ggaagtgacacatgtgagcttg 308
             ||||||||||||||||||||||
Sbjct: 63821 ggaagtgacacatgtgagcttg 63800
to top
>gb|AC165952.4| Mus musculus BAC clone RP23-460G24 from chromosome 14, complete
             sequence
          Length = 183416

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 80    atgaagtgcaaagctgagaaa 100
             |||||||||||||||||||||
Sbjct: 49420 atgaagtgcaaagctgagaaa 49400
to top
>ref|XM_641986.1| Dictyostelium discoideum hypothetical protein (DDB0189324), partial
            mRNA
          Length = 6837

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 38   ttggcaatgagtgaaccaaactctg 62
            ||||||||| |||||||||||||||
Sbjct: 3700 ttggcaatgcgtgaaccaaactctg 3724
to top
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 238     gatgccagggttcagtactgc 258
               |||||||||||||||||||||
Sbjct: 2628536 gatgccagggttcagtactgc 2628516
to top
>gb|AC137511.3| Mus musculus BAC clone RP24-313I8 from chromosome 5, complete sequence
          Length = 168197

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 289    aagtgacacatgtgagcttgt 309
              |||||||||||||||||||||
Sbjct: 158407 aagtgacacatgtgagcttgt 158427
to top
>gb|AC141429.4| Mus musculus BAC clone RP23-56L6 from chromosome 18, complete sequence
          Length = 192527

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 444   ttgatgttgttcttccttatg 464
             |||||||||||||||||||||
Sbjct: 74820 ttgatgttgttcttccttatg 74840
to top
>dbj|AB018156.1| Candida versatilis gene for 18S rRNA, partial sequence
          Length = 1758

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 259  acagaagttggacaaacttgg 279
            |||||||||||||||||||||
Sbjct: 1685 acagaagttggacaaacttgg 1705
to top
>gb|AC132468.4| Mus musculus BAC clone RP23-78D19 from 14, complete sequence
          Length = 238544

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 80     atgaagtgcaaagctgagaaa 100
              |||||||||||||||||||||
Sbjct: 142679 atgaagtgcaaagctgagaaa 142699
to top
>gb|AC134588.5| Mus musculus BAC clone RP23-314N18 from 14, complete sequence
          Length = 178957

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 80     atgaagtgcaaagctgagaaa 100
              |||||||||||||||||||||
Sbjct: 116684 atgaagtgcaaagctgagaaa 116704



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 80    atgaagtgcaaagctgagaaa 100
             |||||||||||||||||||||
Sbjct: 35320 atgaagtgcaaagctgagaaa 35340
to top
>gb|AC131670.5| Mus musculus BAC clone RP23-307I19 from 5, complete sequence
          Length = 197080

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 289   aagtgacacatgtgagcttgt 309
             |||||||||||||||||||||
Sbjct: 26869 aagtgacacatgtgagcttgt 26889
to top
>ref|NM_128998.3| Arabidopsis thaliana unknown protein AT2G34460 mRNA, complete cds
          Length = 1096

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 340 tgttcttggtgaagaaggaa 359
           ||||||||||||||||||||
Sbjct: 100 tgttcttggtgaagaaggaa 81
to top
>ref|XM_636412.1| Dictyostelium discoideum isovaleryl-CoA dehydrogenase,
           mitochondrial (DDB0230189), partial mRNA
          Length = 1248

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 49  tgaaccaaactctggctctgatgttgtcagtatgaa 84
           |||||||||  |||| ||||||||||| ||||||||
Sbjct: 477 tgaaccaaatgctggttctgatgttgttagtatgaa 512
to top
>gb|BC077756.1| Xenopus laevis MGC79063 protein, mRNA (cDNA clone MGC:79063
            IMAGE:4956939), complete cds
          Length = 3081

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 349  tgaagaaggaaaaggtgttt 368
            ||||||||||||||||||||
Sbjct: 2100 tgaagaaggaaaaggtgttt 2119
to top
>gb|AC147618.3| Mus musculus chromosome 19 clone RP24-245M20, complete sequence
          Length = 172863

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 55   aaactctggctctgatgttg 74
            ||||||||||||||||||||
Sbjct: 4892 aaactctggctctgatgttg 4911
to top
>gb|AC145433.2| Pan troglodytes BAC clone RP43-43I4 from 7, complete sequence
          Length = 179409

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 347    ggtgaagaaggaaaaggtgt 366
              ||||||||||||||||||||
Sbjct: 121578 ggtgaagaaggaaaaggtgt 121597
to top
>gb|AC141437.4| Mus musculus BAC clone RP23-283O7 from chromosome 19, complete sequence
          Length = 134644

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 55     aaactctggctctgatgttg 74
              ||||||||||||||||||||
Sbjct: 120353 aaactctggctctgatgttg 120372
to top
>gb|BT000884.1| Arabidopsis thaliana clone C105360 unknown protein (At2g34460)
           mRNA, complete cds
          Length = 874

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 340 tgttcttggtgaagaaggaa 359
           ||||||||||||||||||||
Sbjct: 73  tgttcttggtgaagaaggaa 54
to top
>gb|AC142317.1| Pan troglodytes BAC clone RP43-52L16 from 7, complete sequence
          Length = 147345

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 347   ggtgaagaaggaaaaggtgt 366
             ||||||||||||||||||||
Sbjct: 64229 ggtgaagaaggaaaaggtgt 64210
to top
>emb|AL512648.21| Human DNA sequence from clone RP11-465C24 on chromosome 13, complete
             sequence
          Length = 61798

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 361   aggtgtttatgtcatgatgt 380
             ||||||||||||||||||||
Sbjct: 29058 aggtgtttatgtcatgatgt 29077
to top
>gb|AY034977.1| Arabidopsis thaliana unknown protein (At2g34460) mRNA, partial cds
          Length = 934

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 340 tgttcttggtgaagaaggaa 359
           ||||||||||||||||||||
Sbjct: 37  tgttcttggtgaagaaggaa 18
to top
>emb|CR628337.1| Legionella pneumophila str. Lens complete genome
          Length = 3345687

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                       
Query: 27      atattggggcattggcaatgagtgaaccaaactctggctctgatgttgtcagtatg 82
               ||||||| || ||||||||||||||  | ||||| || || ||||| |||||||||
Sbjct: 2001195 atattggtgctttggcaatgagtgagtccaactcagggtccgatgtagtcagtatg 2001250
to top
>emb|CR628336.1| Legionella pneumophila str. Paris complete genome
          Length = 3503610

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                       
Query: 27      atattggggcattggcaatgagtgaaccaaactctggctctgatgttgtcagtatg 82
               ||||||| || ||||||||||||||  | ||||| || || ||||| |||||||||
Sbjct: 2018630 atattggtgctttggcaatgagtgagtccaactcagggtccgatgtagtcagtatg 2018685
to top
>gb|AC181983.2| Gallus gallus BAC clone CH261-63A17 from chromosome ul, complete
             sequence
          Length = 161905

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 79    tatgaagtgcaaagctgagaaagt 102
             ||||| ||||||||||||||||||
Sbjct: 12116 tatgatgtgcaaagctgagaaagt 12093
to top
>gb|AC004481.3| Arabidopsis thaliana chromosome 2 clone F13P17 map ve016, complete
              sequence
          Length = 112763

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 340    tgttcttggtgaagaaggaa 359
              ||||||||||||||||||||
Sbjct: 100194 tgttcttggtgaagaaggaa 100175
to top
>gb|AC004077.3| Arabidopsis thaliana chromosome 2 clone T31E10 map ve016, complete
             sequence
          Length = 93060

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 340   tgttcttggtgaagaaggaa 359
             ||||||||||||||||||||
Sbjct: 74008 tgttcttggtgaagaaggaa 74027
to top
>gb|DQ244011.1| Uncultured fungus clone PFA12AU2004 18S ribosomal RNA gene, partial
            sequence
          Length = 1782

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 261  agaagttggacaaacttggc 280
            ||||||||||||||||||||
Sbjct: 1712 agaagttggacaaacttggc 1731
to top
>emb|AJ628768.1| Bacteriophage S-RSM2 ORF1, omp1 gene, psbA gene, psbD gene and tal
            gene
          Length = 4758

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 334  agagaatgttcttggtgaagaagg 357
            ||||||||||||||||| ||||||
Sbjct: 3588 agagaatgttcttggtgtagaagg 3565
to top
>gb|AY056425.1| Arabidopsis thaliana At2g34460/T31E10.20 mRNA, complete cds
          Length = 893

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 340 tgttcttggtgaagaaggaa 359
           ||||||||||||||||||||
Sbjct: 52  tgttcttggtgaagaaggaa 33
to top
>gb|AC008449.6| Homo sapiens chromosome 5 clone CTC-341A9, complete sequence
          Length = 124405

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 39    tggcaatgagtgaaccaaactctg 62
             |||||||||| |||||||||||||
Sbjct: 69788 tggcaatgagagaaccaaactctg 69765
to top
>gb|AF039047.3| Caenorhabditis elegans cosmid K11D12, complete sequence
          Length = 45675

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 342  ttcttggtgaagaaggaaaa 361
            ||||||||||||||||||||
Sbjct: 1948 ttcttggtgaagaaggaaaa 1967
to top
>gb|AC151989.4| Mus musculus BAC clone RP23-298C3 from chromosome 7, complete sequence
          Length = 217239

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   aatgggaataagatgtggtg 141
             ||||||||||||||||||||
Sbjct: 15040 aatgggaataagatgtggtg 15059
to top
>ref|NM_071946.4| Caenorhabditis elegans Serpentine Receptor, class R family member
           (srr-4) (srr-4) mRNA, complete cds
          Length = 1317

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 342 ttcttggtgaagaaggaaaa 361
           ||||||||||||||||||||
Sbjct: 255 ttcttggtgaagaaggaaaa 274
to top
>dbj|AK032454.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
            enriched library, clone:6430549L24 product:RNA binding
            motif protein 4, full insert sequence
          Length = 2966

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 55   aaactctggctctgatgttg 74
            ||||||||||||||||||||
Sbjct: 2657 aaactctggctctgatgttg 2676
to top
>emb|BX819331.1|CNS0AA83 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB69ZE02 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 994

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 340 tgttcttggtgaagaaggaa 359
           ||||||||||||||||||||
Sbjct: 100 tgttcttggtgaagaaggaa 81
to top
>gb|BC045100.1| Xenopus laevis, clone IMAGE:5542112, mRNA
          Length = 3061

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 349  tgaagaaggaaaaggtgttt 368
            ||||||||||||||||||||
Sbjct: 2079 tgaagaaggaaaaggtgttt 2098
to top
>dbj|AB032202.1| Mus musculus Prss19 gene for neuropsin, complete cds
          Length = 7401

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 122  aatgggaataagatgtggtg 141
            ||||||||||||||||||||
Sbjct: 6689 aatgggaataagatgtggtg 6670


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,465,113
Number of Sequences: 3902068
Number of extensions: 4465113
Number of successful extensions: 86546
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86341
Number of HSP's gapped (non-prelim): 191
length of query: 494
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 472
effective length of database: 17,147,199,772
effective search space: 8093478292384
effective search space used: 8093478292384
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top