Clone Name | bags9l14 |
---|---|
Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 176 bits (89), Expect = 6e-41 Identities = 122/133 (91%) Strand = Plus / Plus Query: 241 agcaaagaagtaacaaaggaaaaggaggatatggaatgggaggtcgtagagaaaacaaaa 300 ||||||||||||||||||||||||||||| |||||||||||||| ||||| | ||||||| Sbjct: 9952264 agcaaagaagtaacaaaggaaaaggaggacatggaatgggaggttgtagaaacaacaaaa 9952323 Query: 301 gctctgagccgaacaggacgggtggaaggggcctataagcctacgaagctctcactagag 360 || |||||||||||||||| ||||||||| ||||| ||||||| |||||| ||||||||| Sbjct: 9952324 gccctgagccgaacaggaccggtggaaggagcctacaagcctaagaagctttcactagag 9952383 Query: 361 gatgaactgaagg 373 ||||| ||||||| Sbjct: 9952384 gatgagctgaagg 9952396 Score = 163 bits (82), Expect = 9e-37 Identities = 136/154 (88%) Strand = Plus / Plus Query: 82 actcagaaagttgatccagcggaaccagctgctaagattgctcaacaagcctcacagttc 141 |||||||||| |||||||| ||||||||| |||||||||| || |||| ||||||||||| Sbjct: 9951988 actcagaaagctgatccagtggaaccagcagctaagattgttcgacaaacctcacagttc 9952047 Query: 142 aaacgatggggacgcaagcatccatttgttcgttatggccttccactcatttctttgaca 201 ||||| |||||||| || |||||||||||||| ||||| || ||||| || ||||||||| Sbjct: 9952048 aaacggtggggacggaaacatccatttgttcgatatgggctgccacttatctctttgaca 9952107 Query: 202 gtgtttggtgcggttggtctagctcatcttatac 235 ||||||||||| || || || ||||||||||||| Sbjct: 9952108 gtgtttggtgcagtaggactcgctcatcttatac 9952141 Score = 83.8 bits (42), Expect = 6e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 371 aggctttgcagcaaaaggtggacataaacagctacgactacaagagaattccca 424 |||||||||||||||||||||||||||||| ||| ||||||||||| ||||||| Sbjct: 9952493 aggctttgcagcaaaaggtggacataaacaactatgactacaagaggattccca 9952546
>gb|AC137075.2| Genomic sequence for Oryza sativa, Nipponbare striain, clone OSJNBb0027B12, from chromosome 3, complete sequence Length = 127426 Score = 176 bits (89), Expect = 6e-41 Identities = 122/133 (91%) Strand = Plus / Plus Query: 241 agcaaagaagtaacaaaggaaaaggaggatatggaatgggaggtcgtagagaaaacaaaa 300 ||||||||||||||||||||||||||||| |||||||||||||| ||||| | ||||||| Sbjct: 2180 agcaaagaagtaacaaaggaaaaggaggacatggaatgggaggttgtagaaacaacaaaa 2239 Query: 301 gctctgagccgaacaggacgggtggaaggggcctataagcctacgaagctctcactagag 360 || |||||||||||||||| ||||||||| ||||| ||||||| |||||| ||||||||| Sbjct: 2240 gccctgagccgaacaggaccggtggaaggagcctacaagcctaagaagctttcactagag 2299 Query: 361 gatgaactgaagg 373 ||||| ||||||| Sbjct: 2300 gatgagctgaagg 2312 Score = 163 bits (82), Expect = 9e-37 Identities = 136/154 (88%) Strand = Plus / Plus Query: 82 actcagaaagttgatccagcggaaccagctgctaagattgctcaacaagcctcacagttc 141 |||||||||| |||||||| ||||||||| |||||||||| || |||| ||||||||||| Sbjct: 1904 actcagaaagctgatccagtggaaccagcagctaagattgttcgacaaacctcacagttc 1963 Query: 142 aaacgatggggacgcaagcatccatttgttcgttatggccttccactcatttctttgaca 201 ||||| |||||||| || |||||||||||||| ||||| || ||||| || ||||||||| Sbjct: 1964 aaacggtggggacggaaacatccatttgttcgatatgggctgccacttatctctttgaca 2023 Query: 202 gtgtttggtgcggttggtctagctcatcttatac 235 ||||||||||| || || || ||||||||||||| Sbjct: 2024 gtgtttggtgcagtaggactcgctcatcttatac 2057 Score = 83.8 bits (42), Expect = 6e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 371 aggctttgcagcaaaaggtggacataaacagctacgactacaagagaattccca 424 |||||||||||||||||||||||||||||| ||| ||||||||||| ||||||| Sbjct: 2409 aggctttgcagcaaaaggtggacataaacaactatgactacaagaggattccca 2462
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 176 bits (89), Expect = 6e-41 Identities = 122/133 (91%) Strand = Plus / Plus Query: 241 agcaaagaagtaacaaaggaaaaggaggatatggaatgggaggtcgtagagaaaacaaaa 300 ||||||||||||||||||||||||||||| |||||||||||||| ||||| | ||||||| Sbjct: 9950385 agcaaagaagtaacaaaggaaaaggaggacatggaatgggaggttgtagaaacaacaaaa 9950444 Query: 301 gctctgagccgaacaggacgggtggaaggggcctataagcctacgaagctctcactagag 360 || |||||||||||||||| ||||||||| ||||| ||||||| |||||| ||||||||| Sbjct: 9950445 gccctgagccgaacaggaccggtggaaggagcctacaagcctaagaagctttcactagag 9950504 Query: 361 gatgaactgaagg 373 ||||| ||||||| Sbjct: 9950505 gatgagctgaagg 9950517 Score = 163 bits (82), Expect = 9e-37 Identities = 136/154 (88%) Strand = Plus / Plus Query: 82 actcagaaagttgatccagcggaaccagctgctaagattgctcaacaagcctcacagttc 141 |||||||||| |||||||| ||||||||| |||||||||| || |||| ||||||||||| Sbjct: 9950109 actcagaaagctgatccagtggaaccagcagctaagattgttcgacaaacctcacagttc 9950168 Query: 142 aaacgatggggacgcaagcatccatttgttcgttatggccttccactcatttctttgaca 201 ||||| |||||||| || |||||||||||||| ||||| || ||||| || ||||||||| Sbjct: 9950169 aaacggtggggacggaaacatccatttgttcgatatgggctgccacttatctctttgaca 9950228 Query: 202 gtgtttggtgcggttggtctagctcatcttatac 235 ||||||||||| || || || ||||||||||||| Sbjct: 9950229 gtgtttggtgcagtaggactcgctcatcttatac 9950262 Score = 83.8 bits (42), Expect = 6e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 371 aggctttgcagcaaaaggtggacataaacagctacgactacaagagaattccca 424 |||||||||||||||||||||||||||||| ||| ||||||||||| ||||||| Sbjct: 9950614 aggctttgcagcaaaaggtggacataaacaactatgactacaagaggattccca 9950667
>gb|AC137074.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0022M22, from chromosome 3, complete sequence Length = 124166 Score = 176 bits (89), Expect = 6e-41 Identities = 122/133 (91%) Strand = Plus / Plus Query: 241 agcaaagaagtaacaaaggaaaaggaggatatggaatgggaggtcgtagagaaaacaaaa 300 ||||||||||||||||||||||||||||| |||||||||||||| ||||| | ||||||| Sbjct: 114653 agcaaagaagtaacaaaggaaaaggaggacatggaatgggaggttgtagaaacaacaaaa 114712 Query: 301 gctctgagccgaacaggacgggtggaaggggcctataagcctacgaagctctcactagag 360 || |||||||||||||||| ||||||||| ||||| ||||||| |||||| ||||||||| Sbjct: 114713 gccctgagccgaacaggaccggtggaaggagcctacaagcctaagaagctttcactagag 114772 Query: 361 gatgaactgaagg 373 ||||| ||||||| Sbjct: 114773 gatgagctgaagg 114785 Score = 163 bits (82), Expect = 9e-37 Identities = 136/154 (88%) Strand = Plus / Plus Query: 82 actcagaaagttgatccagcggaaccagctgctaagattgctcaacaagcctcacagttc 141 |||||||||| |||||||| ||||||||| |||||||||| || |||| ||||||||||| Sbjct: 114377 actcagaaagctgatccagtggaaccagcagctaagattgttcgacaaacctcacagttc 114436 Query: 142 aaacgatggggacgcaagcatccatttgttcgttatggccttccactcatttctttgaca 201 ||||| |||||||| || |||||||||||||| ||||| || ||||| || ||||||||| Sbjct: 114437 aaacggtggggacggaaacatccatttgttcgatatgggctgccacttatctctttgaca 114496 Query: 202 gtgtttggtgcggttggtctagctcatcttatac 235 ||||||||||| || || || ||||||||||||| Sbjct: 114497 gtgtttggtgcagtaggactcgctcatcttatac 114530 Score = 83.8 bits (42), Expect = 6e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 371 aggctttgcagcaaaaggtggacataaacagctacgactacaagagaattccca 424 |||||||||||||||||||||||||||||| ||| ||||||||||| ||||||| Sbjct: 114882 aggctttgcagcaaaaggtggacataaacaactatgactacaagaggattccca 114935
>dbj|AK063268.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-B06, full insert sequence Length = 1742 Score = 119 bits (60), Expect = 1e-23 Identities = 81/88 (92%) Strand = Plus / Plus Query: 337 aagcctacgaagctctcactagaggatgaactgaaggctttgcagcaaaaggtggacata 396 ||||||| |||||| |||||||||||||| |||||||||||||||||||||| ||||||| Sbjct: 1289 aagcctaagaagctttcactagaggatgagctgaaggctttgcagcaaaaggaggacata 1348 Query: 397 aacagctacgactacaagagaattccca 424 |||| ||| ||||||||||| ||||||| Sbjct: 1349 aacaactatgactacaagaggattccca 1376
>ref|NM_148318.2| Arabidopsis thaliana unknown protein AT4G14145 mRNA, complete cds Length = 719 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Plus Query: 385 aaggtggacataaacagctacgactacaagagaattcccaagc 427 |||||||||||||||| ||||| ||||||| |||||| |||| Sbjct: 451 aaggtggacataaacacgtacgagtacaagaaaattccaaagc 493
>emb|Z97335.2|ATFCA0 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 0 Length = 200576 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Minus Query: 385 aaggtggacataaacagctacgactacaagagaattcccaagc 427 |||||||||||||||| ||||| ||||||| |||||| |||| Sbjct: 110456 aaggtggacataaacacgtacgagtacaagaaaattccaaagc 110414
>emb|AL161538.2|ATCHRIV38 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 38 Length = 198944 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Minus Query: 385 aaggtggacataaacagctacgactacaagagaattcccaagc 427 |||||||||||||||| ||||| ||||||| |||||| |||| Sbjct: 50004 aaggtggacataaacacgtacgagtacaagaaaattccaaagc 49962
>dbj|AK119106.1| Arabidopsis thaliana At4g14150 mRNA for putative kinesin, complete cds, clone: RAFL21-46-A17 Length = 795 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Plus Query: 385 aaggtggacataaacagctacgactacaagagaattcccaagc 427 |||||||||||||||| ||||| ||||||| |||||| |||| Sbjct: 525 aaggtggacataaacacgtacgagtacaagaaaattccaaagc 567
>gb|AC145568.4| Mus musculus BAC clone RP24-473H20 from 6, complete sequence Length = 201210 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 501 taatttcttcttcctgtttcttc 523 ||||||||||||||||||||||| Sbjct: 69461 taatttcttcttcctgtttcttc 69439
>gb|AC139751.2| Mus musculus BAC clone RP24-403E24 from chromosome 17, complete sequence Length = 183224 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 501 taatttcttcttcctgtttctt 522 |||||||||||||||||||||| Sbjct: 25901 taatttcttcttcctgtttctt 25922
>emb|CR974459.7| Mouse DNA sequence from clone RP23-179P23 on chromosome X, complete sequence Length = 226435 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 cttcatccacaccagcaaaaag 42 |||||||||||||||||||||| Sbjct: 4263 cttcatccacaccagcaaaaag 4284
>emb|CR628363.12| Mouse DNA sequence from clone RP23-329B21 on chromosome X, complete sequence Length = 196122 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 cttcatccacaccagcaaaaag 42 |||||||||||||||||||||| Sbjct: 9529 cttcatccacaccagcaaaaag 9550
>emb|BX005206.15| Mouse DNA sequence from clone RP23-384P3 on chromosome X, complete sequence Length = 202812 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 cttcatccacaccagcaaaaag 42 |||||||||||||||||||||| Sbjct: 54193 cttcatccacaccagcaaaaag 54214
>emb|CR861378.1| Pongo pygmaeus mRNA; cDNA DKFZp459P092 (from clone DKFZp459P092) Length = 3308 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 504 tttcttcttcctgtttcttcatgagt 529 ||||||||||| |||||||||||||| Sbjct: 1099 tttcttcttccagtttcttcatgagt 1074
>gb|AC087496.8| Homo sapiens chromosome 17, clone RP11-213B3, complete sequence Length = 89631 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 244 aaagaagtaacaaaggaaaagg 265 |||||||||||||||||||||| Sbjct: 73796 aaagaagtaacaaaggaaaagg 73817
>gb|AC005341.13| Homo sapiens chromosome , clone RP11-146P2, complete sequence Length = 161449 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 244 aaagaagtaacaaaggaaaagg 265 |||||||||||||||||||||| Sbjct: 153118 aaagaagtaacaaaggaaaagg 153097
>emb|BX323458.7| Zebrafish DNA sequence from clone DKEYP-69B9 in linkage group 16, complete sequence Length = 194378 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 494 tttggagtaatttcttcttcctgtttcttc 523 |||||||| |||| |||||||||||||||| Sbjct: 28671 tttggagtcatttattcttcctgtttcttc 28700
>emb|CR406483.1| Gallus gallus finished cDNA, clone ChEST960g18 Length = 1421 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 432 tgagaacaagtgaaataaagca 453 |||||||||||||||||||||| Sbjct: 1321 tgagaacaagtgaaataaagca 1300
>emb|CT025659.7| Mouse DNA sequence from clone RP24-86F23 on chromosome 17, complete sequence Length = 183855 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 501 taatttcttcttcctgtttctt 522 |||||||||||||||||||||| Sbjct: 28504 taatttcttcttcctgtttctt 28483
>ref|XM_526749.1| PREDICTED: Pan troglodytes similar to KIAA1392 protein (LOC471367), mRNA Length = 2493 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 504 tttcttcttcctgtttcttcatgag 528 ||||||||||| ||||||||||||| Sbjct: 925 tttcttcttccagtttcttcatgag 901
>ref|XM_461241.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F21868g) partial mRNA Length = 2370 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 119 ttgctcaacaagcctcacagttcaa 143 |||||||||||||||||||| |||| Sbjct: 1151 ttgctcaacaagcctcacagatcaa 1175
>ref|NM_020225.1| Homo sapiens storkhead box 2 (STOX2), mRNA Length = 4654 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 504 tttcttcttcctgtttcttcatgag 528 ||||||||||| ||||||||||||| Sbjct: 2456 tttcttcttccagtttcttcatgag 2432
>gb|AC079957.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-144I17, complete sequence Length = 196474 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 gtcaaatactgtcatgaatac 80 ||||||||||||||||||||| Sbjct: 98583 gtcaaatactgtcatgaatac 98603
>gb|AC124676.7| Mus musculus chromosome 6, clone RP24-93M1, complete sequence Length = 212789 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 gtcaaatactgtcatgaatac 80 ||||||||||||||||||||| Sbjct: 191192 gtcaaatactgtcatgaatac 191172
>gb|AC117810.8| Mus musculus chromosome 18, clone RP24-571D2, complete sequence Length = 207527 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 424 aagcaaaatgagaacaagtgaaata 448 |||||||||||||||||||| |||| Sbjct: 126866 aagcaaaatgagaacaagtgtaata 126890
>emb|AL451042.10| Human DNA sequence from clone RP11-276H7 on chromosome 1 Contains the EPHA2 gene for EphA2, two novel genes and two CpG islands, complete sequence Length = 88098 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 cctcctctgcctccctccact 22 ||||||||||||||||||||| Sbjct: 15673 cctcctctgcctccctccact 15653
>emb|AL137140.12| Human DNA sequence from clone RP11-137M6 on chromosome 13q21.33-22.3 Contains the SCEL gene for sciellin, a novel gene and a CpG island, complete sequence Length = 193098 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 429 aaatgagaacaagtgaaataa 449 ||||||||||||||||||||| Sbjct: 88909 aaatgagaacaagtgaaataa 88929
>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii Length = 2336804 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 ttgctcaacaagcctcacagttcaa 143 |||||||||||||||||||| |||| Sbjct: 1742619 ttgctcaacaagcctcacagatcaa 1742595
>gb|AC027104.6| Homo sapiens chromosome 15, clone RP11-326L17, complete sequence Length = 180202 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 122 ctcaacaagcctcacagttca 142 ||||||||||||||||||||| Sbjct: 60935 ctcaacaagcctcacagttca 60955
>gb|AC074194.6| Homo sapiens BAC clone RP11-739P1 from 4, complete sequence Length = 177273 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 504 tttcttcttcctgtttcttcatgag 528 ||||||||||| ||||||||||||| Sbjct: 138604 tttcttcttccagtttcttcatgag 138580
>emb|AL928695.23| Zebrafish DNA sequence from clone CH211-217M19 in linkage group 16, complete sequence Length = 215878 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 495 ttggagtaatttcttcttcctgtttcttc 523 ||||||| |||| |||||||||||||||| Sbjct: 161797 ttggagtcatttattcttcctgtttcttc 161825
>dbj|AB066526.1| Macaca fascicularis brain cDNA clone:QmoA-11510, similar to human hypothetical protein DKFZp762K222, mRNA, NM_020225 Length = 3906 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 504 tttcttcttcctgtttcttcatgag 528 ||||||||||| ||||||||||||| Sbjct: 1978 tttcttcttccagtttcttcatgag 1954
>dbj|AB037813.1| Homo sapiens mRNA for KIAA1392 protein, partial cds Length = 4654 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 504 tttcttcttcctgtttcttcatgag 528 ||||||||||| ||||||||||||| Sbjct: 2456 tttcttcttccagtttcttcatgag 2432
>gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome Length = 1796226 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 agttgttaattttgcaaagg 60 |||||||||||||||||||| Sbjct: 1177858 agttgttaattttgcaaagg 1177839
>ref|NM_203460.1| Danio rerio alcohol dehydrogenase 8b (adh8b), mRNA Length = 1484 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 ttggtgcggttggtctagct 225 |||||||||||||||||||| Sbjct: 773 ttggtgcggttggtctagct 792
>ref|NM_017123.1| Rattus norvegicus amphiregulin (Areg), mRNA Length = 1154 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 504 tttcttcttcctgtttcttc 523 |||||||||||||||||||| Sbjct: 574 tttcttcttcctgtttcttc 555
>gb|AC005364.1| Homo sapiens chromosome 16, cosmid clone 53H2 (LANL), complete sequence Length = 36342 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 cctcctctgcctccctccac 21 |||||||||||||||||||| Sbjct: 3363 cctcctctgcctccctccac 3344
>gb|AC005347.1| Homo sapiens chromosome 16, cosmid clone 308C6 (LANL), complete sequence Length = 35828 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 cctcctctgcctccctccac 21 |||||||||||||||||||| Sbjct: 24152 cctcctctgcctccctccac 24133
>gb|AY309075.1| Danio rerio mixed alcohol dehydrogenase Adh8b (adh8b) mRNA, complete cds Length = 1484 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 ttggtgcggttggtctagct 225 |||||||||||||||||||| Sbjct: 773 ttggtgcggttggtctagct 792
>gb|AC111135.10| Mus musculus chromosome 9, clone RP23-349N4, complete sequence Length = 215213 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 gaagcaaagaagtaacaaag 258 |||||||||||||||||||| Sbjct: 210764 gaagcaaagaagtaacaaag 210745
>gb|AC163769.4| Pan troglodytes BAC clone CH251-59O12 from chromosome unknown, complete sequence Length = 185010 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 aaagaagtaacaaaggaaaa 263 |||||||||||||||||||| Sbjct: 38547 aaagaagtaacaaaggaaaa 38528
>gb|BC008080.2| Homo sapiens splicing factor 1, transcript variant 3, mRNA (cDNA clone MGC:4482 IMAGE:2961666), complete cds Length = 2665 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 aaagaagtaacaaaggaaaa 263 |||||||||||||||||||| Sbjct: 1947 aaagaagtaacaaaggaaaa 1928
>gb|AC110901.16| Mus musculus chromosome 13, clone RP24-165P9, complete sequence Length = 179128 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 caaagaagtaacaaaggaaa 262 |||||||||||||||||||| Sbjct: 111703 caaagaagtaacaaaggaaa 111722
>gb|AC147322.2| Pan troglodytes BAC clone RP43-41H22 from 7, complete sequence Length = 174281 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 agaagtaacaaaggaaaagg 265 |||||||||||||||||||| Sbjct: 9800 agaagtaacaaaggaaaagg 9781
>gb|AC136641.3| Mus musculus BAC clone RP23-313G19 from chromosome 7, complete sequence Length = 215208 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ctcctctgcctccctccacttcat 26 ||||||||||||| |||||||||| Sbjct: 54105 ctcctctgcctccttccacttcat 54082
>gb|BC020217.1| Homo sapiens splicing factor 1, mRNA (cDNA clone MGC:31898 IMAGE:4869292), complete cds Length = 2887 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 aaagaagtaacaaaggaaaa 263 |||||||||||||||||||| Sbjct: 2150 aaagaagtaacaaaggaaaa 2131
>gb|AC123683.6| Mus musculus chromosome 9, clone RP23-296I6, complete sequence Length = 189100 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 gaagcaaagaagtaacaaag 258 |||||||||||||||||||| Sbjct: 7112 gaagcaaagaagtaacaaag 7093
>gb|BC011657.2| Homo sapiens splicing factor 1, mRNA (cDNA clone IMAGE:4124268), partial cds Length = 2817 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 aaagaagtaacaaaggaaaa 263 |||||||||||||||||||| Sbjct: 2093 aaagaagtaacaaaggaaaa 2074
>gb|AC125188.4| Mus musculus BAC clone RP23-303O19 from chromosome 9, complete sequence Length = 194053 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 tagagaaaacaaaagctctgagcc 310 ||||||||||| |||||||||||| Sbjct: 115155 tagagaaaacacaagctctgagcc 115178
>gb|BC032163.1| Mus musculus dedicator of cyto-kinesis 1, mRNA (cDNA clone IMAGE:5345231), containing frame-shift errors Length = 3121 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ctcctctgcctccctccacttcat 26 ||||||||||||| |||||||||| Sbjct: 1441 ctcctctgcctccttccacttcat 1418
>gb|BC032676.1| Homo sapiens splicing factor 1, mRNA (cDNA clone IMAGE:5575272), containing frame-shift errors Length = 2857 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 aaagaagtaacaaaggaaaa 263 |||||||||||||||||||| Sbjct: 2080 aaagaagtaacaaaggaaaa 2061
>gb|AC122537.4| Mus musculus BAC clone RP24-548A15 from chromosome 7, complete sequence Length = 195987 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 509 tcttcctgtttcttcatgag 528 |||||||||||||||||||| Sbjct: 94445 tcttcctgtttcttcatgag 94426
>gb|AC121828.3| Mus musculus BAC clone RP23-478K4 from chromosome 1, complete sequence Length = 179626 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 504 tttcttcttcctgtttcttc 523 |||||||||||||||||||| Sbjct: 121818 tttcttcttcctgtttcttc 121837
>gb|BC058998.1| Mus musculus dedicator of cyto-kinesis 1, mRNA (cDNA clone IMAGE:5721467), partial cds Length = 4020 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ctcctctgcctccctccacttcat 26 ||||||||||||| |||||||||| Sbjct: 723 ctcctctgcctccttccacttcat 700
>emb|BX664703.21| Zebrafish DNA sequence from clone DKEYP-74A8 in linkage group 6, complete sequence Length = 193958 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 236 ggggaagcaaagaagtaacaaaggaaaa 263 ||||||||| |||||| ||||||||||| Sbjct: 91017 ggggaagcagagaagttacaaaggaaaa 90990
>gb|AC004549.1| Homo sapiens BAC clone CTA-459N13 from 7, complete sequence Length = 123891 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 agaagtaacaaaggaaaagg 265 |||||||||||||||||||| Sbjct: 69651 agaagtaacaaaggaaaagg 69632
>gb|BC038446.1| Homo sapiens splicing factor 1, mRNA (cDNA clone MGC:45254 IMAGE:5493676), complete cds Length = 2989 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 aaagaagtaacaaaggaaaa 263 |||||||||||||||||||| Sbjct: 2271 aaagaagtaacaaaggaaaa 2252
>gb|AC146704.8| Medicago truncatula clone mth2-107f11, complete sequence Length = 116591 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 caaaaagttgttaattttgc 55 |||||||||||||||||||| Sbjct: 20154 caaaaagttgttaattttgc 20135
>gb|BC069273.1| Homo sapiens cDNA clone IMAGE:5927414, containing frame-shift errors Length = 2902 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 aaagaagtaacaaaggaaaa 263 |||||||||||||||||||| Sbjct: 2158 aaagaagtaacaaaggaaaa 2139
>emb|AL606804.11| Human DNA sequence from clone RP11-978I15 on chromosome 1 Contains the 3' end of the CIAS1 gene for cold autoinflammatory syndrome 1, the gene for a novel 7 transmembrane receptor (rhodopsin family) protein, a 7 transmembrane receptor (rhodopsin family) pseudogene, two novel genes (LOC148823, LOC148824), the OR2C3 gene for olfactory receptor family 2 subfamily C member 3, the 3' end of a novel gene, the OR2G2 for olfactory receptor family 2 subfamily G member 2, the OR2G3 for olfactory receptor family 2 subfamily G member 3, the gene for a novel protein similar to Olfactory receptor 5AV1 (LOC127617) and three CpG islands, complete sequence Length = 185467 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 atgctgtccaagtgtcaaaa 557 |||||||||||||||||||| Sbjct: 22162 atgctgtccaagtgtcaaaa 22181
>emb|AL031589.10|HS11O7 Human DNA sequence from clone RP6-11O7 on chromosome 22q13.1-13.2, complete sequence Length = 115932 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 428 aaaatgagaacaagtgaaataaag 451 ||||||||| |||||||||||||| Sbjct: 21166 aaaatgagagcaagtgaaataaag 21189
>gb|AC120496.2| Genomic sequence for Sorghum bicolor, clone SBBBc0267M07, complete sequence Length = 120132 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 acaaaggaaaaggaggatat 272 |||||||||||||||||||| Sbjct: 32065 acaaaggaaaaggaggatat 32046
>gb|BC006755.1| Mus musculus dedicator of cyto-kinesis 1, mRNA (cDNA clone IMAGE:3709003), partial cds Length = 3330 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ctcctctgcctccctccacttcat 26 ||||||||||||| |||||||||| Sbjct: 29 ctcctctgcctccttccacttcat 6
>gb|BC009668.1| Mus musculus dedicator of cyto-kinesis 1, mRNA (cDNA clone IMAGE:3493084), partial cds Length = 3363 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ctcctctgcctccctccacttcat 26 ||||||||||||| |||||||||| Sbjct: 44 ctcctctgcctccttccacttcat 21
>emb|X55183.1|HSSDGFRNA R.norvegicus mRNA for schwannoma-derived growth factor Length = 1154 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 504 tttcttcttcctgtttcttc 523 |||||||||||||||||||| Sbjct: 574 tttcttcttcctgtttcttc 555
>gb|AC153837.4| Mus musculus 6 BAC RP23-192D5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 232039 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 ttctttgacagtgtttggtg 211 |||||||||||||||||||| Sbjct: 96200 ttctttgacagtgtttggtg 96219
>emb|AL672185.7| Zebrafish DNA sequence from clone BUSM1-172P2 in linkage group 19 Contains the 3' part of the abcb3l2 gene for ATP-binding cassette, sub-family B (MDR/TAP), member 3 like 2, the 5' part of the mhc1uaa gene (major histocompatibility complex class I UAA protein) and four CpG islands, complete sequence Length = 47697 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 tgcagcaaaaggtggacata 396 |||||||||||||||||||| Sbjct: 42451 tgcagcaaaaggtggacata 42470
>gb|BC008724.2| Homo sapiens splicing factor 1, transcript variant 3, mRNA (cDNA clone MGC:8657 IMAGE:2961666), complete cds Length = 2665 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 aaagaagtaacaaaggaaaa 263 |||||||||||||||||||| Sbjct: 1947 aaagaagtaacaaaggaaaa 1928
>emb|AL591126.18| Mouse DNA sequence from clone RP23-188A3 on chromosome 11 Contains a glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene, the 5' end of the Nf1 gene for neurofibromatosis 1 and a ribosomal protein L17 (Rpl17) pseudogene, complete sequence Length = 190048 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 498 gagtaatttcttcttcctgtttct 521 ||||||||||||||| |||||||| Sbjct: 52367 gagtaatttcttcttgctgtttct 52390
>emb|AL603907.12| Mouse DNA sequence from clone RP23-139D10 on chromosome 11 Contains a novel gene, complete sequence Length = 226006 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 504 tttcttcttcctgtttcttc 523 |||||||||||||||||||| Sbjct: 70766 tttcttcttcctgtttcttc 70747
>emb|AJ720375.1| Gallus gallus mRNA for hypothetical protein, clone 16f17 Length = 4963 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 aaagaagtaacaaaggaaaa 263 |||||||||||||||||||| Sbjct: 4643 aaagaagtaacaaaggaaaa 4662
>gb|BC098214.1| Mus musculus dedicator of cyto-kinesis 1, mRNA (cDNA clone IMAGE:30619673), partial cds Length = 3897 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ctcctctgcctccctccacttcat 26 ||||||||||||| |||||||||| Sbjct: 600 ctcctctgcctccttccacttcat 577
>ref|NM_001017545.1| Danio rerio zgc:113339 (zgc:113339), mRNA Length = 3515 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 tcttcttcctgtttcttcat 525 |||||||||||||||||||| Sbjct: 803 tcttcttcctgtttcttcat 784
>emb|CR559943.6| Zebrafish DNA sequence from clone CH211-200O8 in linkage group 13, complete sequence Length = 147505 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 ttggtgcggttggtctagct 225 |||||||||||||||||||| Sbjct: 70444 ttggtgcggttggtctagct 70463
>emb|AL929157.21| Mouse DNA sequence from clone RP23-94K14 on chromosome 2, complete sequence Length = 127383 Score = 40.1 bits (20), Expect = 8.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 555 aaatgagattg-cagagacatcatcatc 581 ||||||||||| |||||||||||||||| Sbjct: 15060 aaatgagattgacagagacatcatcatc 15087
>ref|NM_004630.2| Homo sapiens splicing factor 1 (SF1), transcript variant 1, mRNA Length = 3527 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 aaagaagtaacaaaggaaaa 263 |||||||||||||||||||| Sbjct: 2813 aaagaagtaacaaaggaaaa 2794
>ref|NM_201995.1| Homo sapiens splicing factor 1 (SF1), transcript variant 2, mRNA Length = 3095 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 aaagaagtaacaaaggaaaa 263 |||||||||||||||||||| Sbjct: 2381 aaagaagtaacaaaggaaaa 2362
>ref|NM_201998.1| Homo sapiens splicing factor 1 (SF1), transcript variant 3, mRNA Length = 2890 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 aaagaagtaacaaaggaaaa 263 |||||||||||||||||||| Sbjct: 2176 aaagaagtaacaaaggaaaa 2157
>emb|CR600558.1| full-length cDNA clone CS0DI063YM15 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1737 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 aaagaagtaacaaaggaaaa 263 |||||||||||||||||||| Sbjct: 1057 aaagaagtaacaaaggaaaa 1038
>gb|AC007718.12| Homo sapiens chromosome 8, clone RP11-29A2, complete sequence Length = 149965 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 428 aaaatgagaacaagtgaaataaag 451 |||||||||||||| ||||||||| Sbjct: 42297 aaaatgagaacaagagaaataaag 42274
>gb|AC091193.6| Homo sapiens chromosome 8, clone RP11-745K9, complete sequence Length = 142064 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 428 aaaatgagaacaagtgaaataaag 451 |||||||||||||| ||||||||| Sbjct: 128891 aaaatgagaacaagagaaataaag 128868
>ref|XM_695227.1| PREDICTED: Danio rerio similar to zinc finger protein 521 (LOC571623), partial mRNA Length = 1777 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 tgaaggctttgcagcaaaag 387 |||||||||||||||||||| Sbjct: 823 tgaaggctttgcagcaaaag 804
>gb|AC134763.4| Rattus norvegicus BAC CH230-221M14 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 222524 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 tcctctgcctccctccacttcatc 27 ||||||||||||||||| |||||| Sbjct: 77629 tcctctgcctccctccagttcatc 77652
>ref|NM_001033420.1| Mus musculus dedicator of cyto-kinesis 1 (Dock1), mRNA Length = 6815 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ctcctctgcctccctccacttcat 26 ||||||||||||| |||||||||| Sbjct: 3536 ctcctctgcctccttccacttcat 3513
>dbj|AK164963.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130009E04 product:dedicator of cyto-kinesis 1, full insert sequence Length = 3719 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ctcctctgcctccctccacttcat 26 ||||||||||||| |||||||||| Sbjct: 3522 ctcctctgcctccttccacttcat 3499
>gb|AC147316.4| Pan troglodytes BAC clone RP43-49H2 from chromosome 7, complete sequence Length = 209609 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 agaagtaacaaaggaaaagg 265 |||||||||||||||||||| Sbjct: 89576 agaagtaacaaaggaaaagg 89557
>emb|BX322540.5| Zebrafish DNA sequence from clone CH211-247B3 in linkage group 19, complete sequence Length = 156150 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 aaaaggaggatatggaatgg 279 |||||||||||||||||||| Sbjct: 118178 aaaaggaggatatggaatgg 118159
>gb|BC000773.1|BC000773 Homo sapiens, Similar to zinc finger protein 162, clone IMAGE:3506879, mRNA, partial cds Length = 2026 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 aaagaagtaacaaaggaaaa 263 |||||||||||||||||||| Sbjct: 1316 aaagaagtaacaaaggaaaa 1297
>gb|AC000134.14| Homo sapiens Chromosome 11q13 BAC Clone 137c7, complete sequence Length = 203300 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 aaagaagtaacaaaggaaaa 263 |||||||||||||||||||| Sbjct: 116987 aaagaagtaacaaaggaaaa 117006
>emb|BX005193.17| Zebrafish DNA sequence from clone CH211-146M5, complete sequence Length = 169110 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 ttggtgcggttggtctagct 225 |||||||||||||||||||| Sbjct: 95328 ttggtgcggttggtctagct 95309
>gb|AF361796.1|AF361796 Homo sapiens serine/cysteine proteinase inhibitor clade A member 5 (SERPINA5) gene, complete cds Length = 8145 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 cctcctctgcctccctccacttca 25 |||||||| ||||||||||||||| Sbjct: 285 cctcctcttcctccctccacttca 262
>emb|BX324215.14| Zebrafish DNA sequence from clone DKEY-42L16 in linkage group 22, complete sequence Length = 207877 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 gcagcaaaaggtggacataa 397 |||||||||||||||||||| Sbjct: 6627 gcagcaaaaggtggacataa 6646
>gb|BC092160.1| Danio rerio zgc:113339, mRNA (cDNA clone MGC:113339 IMAGE:7141239), complete cds Length = 3515 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 tcttcttcctgtttcttcat 525 |||||||||||||||||||| Sbjct: 803 tcttcttcctgtttcttcat 784
>gb|AC116482.11| Mus musculus chromosome 8, clone RP23-423D8, complete sequence Length = 202027 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 agcaaagaagtaacaaagga 260 |||||||||||||||||||| Sbjct: 91735 agcaaagaagtaacaaagga 91754
>gb|AC103895.3| Papio anubis clone RP41-397E13, complete sequence Length = 166686 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 agaagtaacaaaggaaaagg 265 |||||||||||||||||||| Sbjct: 87872 agaagtaacaaaggaaaagg 87853
>ref|XM_219424.3| PREDICTED: Rattus norvegicus similar to Dock1 protein (LOC309081), mRNA Length = 6021 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ctcctctgcctccctccacttcat 26 ||||||||||||| |||||||||| Sbjct: 2779 ctcctctgcctccttccacttcat 2756
>gb|AC009298.3| Homo sapiens BAC clone RP11-17I6 from 2, complete sequence Length = 165242 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 agaagtaacaaaggaaaagg 265 |||||||||||||||||||| Sbjct: 154303 agaagtaacaaaggaaaagg 154322
>emb|AL929512.14| Zebrafish DNA sequence from clone CH211-1L10, complete sequence Length = 197232 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 236 ggggaagcaaagaagtaacaaaggaaaa 263 ||||||||| |||||| ||||||||||| Sbjct: 142622 ggggaagcagagaagttacaaaggaaaa 142649
>gb|BC071367.1| Danio rerio alcohol dehydrogenase 8b, mRNA (cDNA clone MGC:86683 IMAGE:6895268), complete cds Length = 1545 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 ttggtgcggttggtctagct 225 |||||||||||||||||||| Sbjct: 770 ttggtgcggttggtctagct 789
>gb|AC154756.2| Mus musculus BAC clone RP23-114J15 from 13, complete sequence Length = 189515 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 499 agtaatttcttcttcctgtttctt 522 ||||||||||||||||||| |||| Sbjct: 33535 agtaatttcttcttcctgtctctt 33558
>gb|AC138309.4| Mus musculus BAC clone RP23-250M10 from 13, complete sequence Length = 180449 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 caaagaagtaacaaaggaaa 262 |||||||||||||||||||| Sbjct: 48752 caaagaagtaacaaaggaaa 48771
>emb|AL831726.11| Zebrafish DNA sequence from clone DKEY-49N23 in linkage group 22, complete sequence Length = 245697 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 gcagcaaaaggtggacataa 397 |||||||||||||||||||| Sbjct: 124061 gcagcaaaaggtggacataa 124080
>emb|CR381605.5| Zebrafish DNA sequence from clone CH211-156J19 in linkage group 21, complete sequence Length = 180526 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 293 aaacaaaagctctgagccgaacag 316 ||||| |||||||||||||||||| Sbjct: 160352 aaacagaagctctgagccgaacag 160375
>gb|AC007156.2|AC007156 Homo sapiens chromosome 18, clone hRPK.419_J_16, complete sequence Length = 203591 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 ctgcctccctccacttcatc 27 |||||||||||||||||||| Sbjct: 78369 ctgcctccctccacttcatc 78388 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 ctgcctccctccacttcatc 27 |||||||||||||||||||| Sbjct: 68058 ctgcctccctccacttcatc 68077
>emb|AL132990.4|CNS01DTY Human chromosome 14 DNA sequence BAC R-262P9 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 181004 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 cctcctctgcctccctccacttca 25 |||||||| ||||||||||||||| Sbjct: 175316 cctcctcttcctccctccacttca 175293
>emb|AL049839.3|CNS0000J Human chromosome 14 DNA sequence BAC R-986E7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 214527 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 cctcctctgcctccctccacttca 25 |||||||| ||||||||||||||| Sbjct: 31264 cctcctcttcctccctccacttca 31241
>dbj|AP001462.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-869B15, complete sequence Length = 106886 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 aaagaagtaacaaaggaaaa 263 |||||||||||||||||||| Sbjct: 49577 aaagaagtaacaaaggaaaa 49596
>dbj|AP005271.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-752I5, complete sequence Length = 200108 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 ctgcctccctccacttcatc 27 |||||||||||||||||||| Sbjct: 193046 ctgcctccctccacttcatc 193027
>gb|AC134244.4| Mus musculus BAC clone RP24-218O13 from 14, complete sequence Length = 220538 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 gtaatttcttcttcctgttt 519 |||||||||||||||||||| Sbjct: 87433 gtaatttcttcttcctgttt 87452
>gb|BC034451.1| Homo sapiens splicing factor 1, transcript variant 2, mRNA (cDNA clone IMAGE:4822403) Length = 3093 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 aaagaagtaacaaaggaaaa 263 |||||||||||||||||||| Sbjct: 2381 aaagaagtaacaaaggaaaa 2362
>gb|L49380.1|HUMTRFAA Homo sapiens clone B4 transcription factor ZFM1 mRNA, complete cds Length = 3479 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 aaagaagtaacaaaggaaaa 263 |||||||||||||||||||| Sbjct: 2774 aaagaagtaacaaaggaaaa 2755
>gb|L49345.1|HUMZFM1TF Homo sapiens transcription factor ZFM1 isoform B3 mRNA, complete cds Length = 2847 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 aaagaagtaacaaaggaaaa 263 |||||||||||||||||||| Sbjct: 2141 aaagaagtaacaaaggaaaa 2122
>gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete genome Length = 1796846 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 agttgttaattttgcaaagg 60 |||||||||||||||||||| Sbjct: 1179990 agttgttaattttgcaaagg 1179971
>emb|AL603829.5| Mouse DNA sequence from clone RP23-416G21 on chromosome 11, complete sequence Length = 226220 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 501 taatttcttcttcctgtttcttca 524 |||||||||||| ||||||||||| Sbjct: 195246 taatttcttctttctgtttcttca 195269
>emb|Y08766.1|HSSF1BO H.sapiens mRNA for splicing factor, SF1-Bo isoform Length = 2298 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 aaagaagtaacaaaggaaaa 263 |||||||||||||||||||| Sbjct: 2298 aaagaagtaacaaaggaaaa 2279
>emb|Y08765.1|HSSF1H1 H.sapiens mRNA for splicing factor, SF1-HL1 isoform Length = 3176 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 aaagaagtaacaaaggaaaa 263 |||||||||||||||||||| Sbjct: 2478 aaagaagtaacaaaggaaaa 2459
>gb|M68516.1|HUMPCI Human protein C inhibitor gene, complete cds Length = 15571 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 cctcctctgcctccctccacttca 25 |||||||| ||||||||||||||| Sbjct: 6747 cctcctcttcctccctccacttca 6724
>dbj|D26120.1|HUMZFM1A Homo sapiens mRNA for ZFM1 protein, ZFM1 protein alternatively spliced product, complete cds Length = 3131 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 aaagaagtaacaaaggaaaa 263 |||||||||||||||||||| Sbjct: 2435 aaagaagtaacaaaggaaaa 2416 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,960,075 Number of Sequences: 3902068 Number of extensions: 7960075 Number of successful extensions: 154382 Number of sequences better than 10.0: 119 Number of HSP's better than 10.0 without gapping: 118 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 153989 Number of HSP's gapped (non-prelim): 394 length of query: 628 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 605 effective length of database: 17,143,297,704 effective search space: 10371695110920 effective search space used: 10371695110920 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)