Clone Information

BLAST Search Result

Clone Name	bags9l13
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	SKIV2_HUMAN (Q15477) Helicase SKI2W (EC 3.6.1.-) (Helicase-like ...	174	3e-43
2	SKI2_YEAST (P35207) Antiviral helicase SKI2 (EC 3.6.1.-)	141	1e-33
3	YH2O_CAEEL (Q23223) Putative helicase W08D2.7 (EC 3.6.1.-)	126	6e-29
4	SK2L2_HUMAN (P42285) Superkiller viralicidic activity 2-like 2 (...	120	3e-27
5	YDVG_SCHPO (O14232) Putative helicase C6F12.16c (EC 3.6.1.-)	120	4e-27
6	SK2L2_MOUSE (Q9CZU3) Superkiller viralicidic activity 2-like 2 (...	119	8e-27
7	MTR4_YEAST (P47047) ATP-dependent RNA helicase DOB1 (EC 3.6.1.-)...	117	2e-26
8	YE02_SCHPO (O13799) Putative helicase C17H9.02 (EC 3.6.1.-)	115	1e-25
9	HELY_MYCTU (Q10701) Probable helicase helY (EC 3.6.1.-)	91	2e-18
10	HELY_MYCLE (Q9ZBD8) Probable helicase helY (EC 3.6.1.-)	84	4e-16
11	HELS_AERPE (Q9YFQ8) Putative ski2-type helicase (EC 3.6.1.-)	55	1e-13
12	HELS_SULSO (Q97VY9) Putative ski2-type helicase (EC 3.6.1.-)	58	5e-12
13	HELS_SULTO (Q974S1) Putative ski2-type helicase (EC 3.6.1.-)	50	2e-09
14	HELS_METMA (Q8PZR7) Putative ski2-type helicase (EC 3.6.1.-)	45	2e-08
15	HELS_METAC (Q8TL39) Putative ski2-type helicase (EC 3.6.1.-)	45	2e-08
16	SLH1_YEAST (P53327) Antiviral helicase SLH1 (EC 3.6.1.-) (SKI2-l...	42	4e-08
17	YP93_CAEEL (Q09475) Putative helicase C28H8.3 (EC 3.6.1.-)	56	8e-08
18	BRR2_YEAST (P32639) Pre-mRNA-splicing helicase BRR2 (EC 3.6.1.-)...	40	2e-07
19	HELS_PYRAB (Q9V0A9) Putative ski2-type helicase (EC 3.6.1.-)	44	2e-07
20	HELS_PYRHO (O59025) Putative ski2-type helicase (EC 3.6.1.-)	43	4e-07
21	HELS_PYRFU (O73946) Putative ski2-type helicase (EC 3.6.1.-)	43	6e-07
22	HFM1_YEAST (P51979) ATP-dependent DNA helicase MER3 (EC 3.6.1.-)...	43	8e-07
23	HELS_HALMA (Q5UYM9) Putative ski2-type helicase (EC 3.6.1.-)	44	1e-06
24	HELS_METTH (O26901) Putative ski2-type helicase (EC 3.6.1.-)	40	1e-06
25	U520_DROME (Q9VUV9) Putative U5 small nuclear ribonucleoprotein ...	38	2e-06
26	HELS_HALSA (Q9HMV6) Putative ski2-type helicase (EC 3.6.1.-)	43	2e-06
27	HELS_THEVO (Q97AI2) Putative ski2-type helicase (EC 3.6.1.-)	44	2e-06
28	U520_HUMAN (O75643) U5 small nuclear ribonucleoprotein 200 kDa h...	39	8e-06
29	YBBA_SCHPO (O60072) Putative helicase C13G1.10c (EC 3.6.1.-)	34	3e-05
30	HELS_THEAC (Q9HJX7) Putative ski2-type helicase (EC 3.6.1.-)	36	9e-04
31	HELC1_HUMAN (Q8N3C0) Activating signal cointegrator 1 complex su...	39	0.010
32	Y1401_METJA (Q58796) Probable ATP-dependent helicase MJ1401 (EC ...	39	0.017
33	HELS_METJA (Q58524) Putative ski2-type helicase (EC 3.6.1.-) [Co...	39	0.017
34	U520_CAEEL (Q9U2G0) Putative U5 small nuclear ribonucleoprotein ...	35	0.14
35	HELS_PYRKO (Q5JGV6) Putative ski2-type helicase (EC 3.6.1.-) [Co...	34	0.42
36	MS116_YEAST (P15424) ATP-dependent RNA helicase MSS116, mitochon...	33	0.72
37	Y255_RICPR (Q9ZDS0) Hypothetical protein RP255	33	0.94
38	SUV3_YEAST (P32580) ATP-dependent RNA helicase SUV3, mitochondri...	33	0.94
39	SUV3_SACDO (O74727) ATP-dependent RNA helicase SUV3, mitochondri...	33	0.94
40	PGRC2_HUMAN (O15173) Membrane-associated progesterone receptor c...	32	1.2
41	PGRC2_MOUSE (Q80UU9) Membrane associated progesterone receptor c...	31	3.6
42	PGRC2_RAT (Q5XIU9) Membrane associated progesterone receptor com...	31	3.6
43	PHF10_BRARE (Q6NWE1) PHD finger protein 10	31	3.6
44	CATA_BACST (P14412) Peroxidase/catalase (EC 1.11.1.6) (Catalase-...	31	3.6
45	PGRC1_HUMAN (O00264) Membrane-associated progesterone receptor c...	30	4.6
46	PHF10_MOUSE (Q9D8M7) PHD finger protein 10	30	6.1
47	PHF10_HUMAN (Q8WUB8) PHD finger protein 10 (XAP135)	30	6.1
48	MYLIP_HUMAN (Q8WY64) Ubiquitin ligase MYLIP (EC 6.3.2.-) (Myosin...	30	6.1
49	PHF10_XENLA (Q63ZP1) PHD finger protein 10	30	6.1
50	SLU7_CANGA (Q6FRY5) Pre-mRNA-splicing factor SLU7	30	7.9
51	DNJA3_MOUSE (Q99M87) DnaJ homolog subfamily A member 3, mitochon...	30	7.9
52	PDR7_ORYSA (Q8GU88) Putative pleiotropic drug resistance protein 7	30	7.9

>SKIV2_HUMAN (Q15477) Helicase SKI2W (EC 3.6.1.-) (Helicase-like protein) (HLP)|
          Length = 1246

 Score =  174 bits (440), Expect = 3e-43
 Identities = 82/137 (59%), Positives = 110/137 (80%)
 Frame = +1

Query: 106  LRYCFPPXTFAMGVNAPARTVVFDTLRKFDGKEHRRLLPGEYIQMAGRAGRRGLDTIGTV 285
            ++  F   TFAMGVN PARTVVFD++RK DG   R LLPGEY+QMAGRAGRRGLD  GTV
Sbjct: 656  VKVLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTV 715

Query: 286  IMMCRDEIPEESDLKNLLVGKPTRLESQFRLTYTMILHLLRVEELKVEDMLKRSFAEFHA 465
            I++C+  +PE +DL  +++GKP++L+SQFRLTYTMIL+LLRV+ L+VEDM+KRSF+EF +
Sbjct: 716  ILLCKGRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPS 775

Query: 466  QKDLPEKEKLLLQMLRQ 516
            +KD    E+ L ++ ++
Sbjct: 776  RKDSKAHEQALAELTKR 792



 Score = 60.5 bits (145), Expect = 4e-09
 Identities = 25/38 (65%), Positives = 33/38 (86%)
 Frame = +3

Query: 30  GIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXICYG 143
           G+GVHH+G+LPI+KE+VEMLF RG++KVLF+TE    G
Sbjct: 631 GLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMG 668

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>SKI2_YEAST (P35207) Antiviral helicase SKI2 (EC 3.6.1.-)|
          Length = 1287

 Score =  141 bits (356), Expect = 1e-33
 Identities = 74/143 (51%), Positives = 101/143 (70%)
 Frame = +1

Query: 106  LRYCFPPXTFAMGVNAPARTVVFDTLRKFDGKEHRRLLPGEYIQMAGRAGRRGLDTIGTV 285
            ++  F   TFAMG+N P RTV+F ++RK DG   R L PGE+ QMAGRAGRRGLD+ GTV
Sbjct: 716  IKVLFATETFAMGLNLPTRTVIFSSIRKHDGNGLRELTPGEFTQMAGRAGRRGLDSTGTV 775

Query: 286  IMMCRDEIPEESDLKNLLVGKPTRLESQFRLTYTMILHLLRVEELKVEDMLKRSFAEFHA 465
            I+M  +     +  K + +G PTRL+SQFRLTY MIL+LLR+E L+VE+M+K SF+E   
Sbjct: 776  IVMAYNSPLSIATFKEVTMGVPTRLQSQFRLTYNMILNLLRIEALRVEEMIKYSFSENAK 835

Query: 466  QKDLPEKEKLLLQMLRQPTKTIE 534
            +   PE EK  +++L++  +TIE
Sbjct: 836  ETLQPEHEK-QIKVLQEELQTIE 857



 Score = 56.2 bits (134), Expect = 8e-08
 Identities = 25/38 (65%), Positives = 30/38 (78%)
 Frame = +3

Query: 30  GIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXICYG 143
           GI VHH GLLPIVKE++E+LF +G IKVLF+TE    G
Sbjct: 691 GIAVHHGGLLPIVKELIEILFSKGFIKVLFATETFAMG 728

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>YH2O_CAEEL (Q23223) Putative helicase W08D2.7 (EC 3.6.1.-)|
          Length = 1026

 Score =  126 bits (316), Expect = 6e-29
 Identities = 66/137 (48%), Positives = 90/137 (65%)
 Frame = +1

Query: 106 LRYCFPPXTFAMGVNAPARTVVFDTLRKFDGKEHRRLLPGEYIQMAGRAGRRGLDTIGTV 285
           ++  F   TF+MG+N PARTVVF + RKFDG ++R +  GEYIQMAGRAGRRG D  GTV
Sbjct: 463 VKVLFATETFSMGLNMPARTVVFTSARKFDGSDNRYITSGEYIQMAGRAGRRGKDDRGTV 522

Query: 286 IMMCRDEIPEESDLKNLLVGKPTRLESQFRLTYTMILHLLRVEELKVEDMLKRSFAEFHA 465
           I+M  D      D K ++ G    L SQFRLTY M+L+L+RVE + V  ++  SF +F +
Sbjct: 523 ILMV-DSAMSADDAKQIIKGATDPLNSQFRLTYNMVLNLMRVEGMAVSWIINNSFHQFQS 581

Query: 466 QKDLPEKEKLLLQMLRQ 516
              +PE +K  +Q+ R+
Sbjct: 582 YAKIPEIDKKCVQVERK 598



 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 23/38 (60%), Positives = 31/38 (81%)
 Frame = +3

Query: 30  GIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXICYG 143
           GIGVHH+GL+PI+KE +E+LF  G++KVLF+TE    G
Sbjct: 438 GIGVHHSGLMPILKETIEILFGEGLVKVLFATETFSMG 475

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>SK2L2_HUMAN (P42285) Superkiller viralicidic activity 2-like 2 (EC 3.6.1.-)|
           (ATP-dependent helicase SKIV2L2)
          Length = 1042

 Score =  120 bits (301), Expect = 3e-27
 Identities = 65/125 (52%), Positives = 83/125 (66%)
 Frame = +1

Query: 106 LRYCFPPXTFAMGVNAPARTVVFDTLRKFDGKEHRRLLPGEYIQMAGRAGRRGLDTIGTV 285
           ++  F   TFAMG+N PARTV+F   RKFDGK+ R +  GEYIQM+GRAGRRG+D  G V
Sbjct: 476 IKALFATETFAMGINMPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIV 535

Query: 286 IMMCRDEIPEESDLKNLLVGKPTRLESQFRLTYTMILHLLRVEELKVEDMLKRSFAEFHA 465
           I+M  DE    +  K LL G    L S F LTY M+L+LLRVEE+  E ML++SF +F  
Sbjct: 536 ILMV-DEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQH 594

Query: 466 QKDLP 480
            + +P
Sbjct: 595 YRAIP 599



 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 23/38 (60%), Positives = 29/38 (76%)
 Frame = +3

Query: 30  GIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXICYG 143
           GIG+HH GLLPI+KE +E+LF  G+IK LF+TE    G
Sbjct: 451 GIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMG 488

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>YDVG_SCHPO (O14232) Putative helicase C6F12.16c (EC 3.6.1.-)|
          Length = 1117

 Score =  120 bits (300), Expect = 4e-27
 Identities = 66/131 (50%), Positives = 88/131 (67%)
 Frame = +1

Query: 106 LRYCFPPXTFAMGVNAPARTVVFDTLRKFDGKEHRRLLPGEYIQMAGRAGRRGLDTIGTV 285
           L+  F   TF++G+N PA+TVVF  +RKFDGK  R +  GEYIQM+GRAGRRGLD  G V
Sbjct: 544 LKVLFATETFSIGLNMPAKTVVFTNVRKFDGKTFRWISGGEYIQMSGRAGRRGLDDRGIV 603

Query: 286 IMMCRDEIPEESDLKNLLVGKPTRLESQFRLTYTMILHLLRVEELKVEDMLKRSFAEFHA 465
           I+M  DE  +    K++L G+  RL+S F L+Y MIL+LLRVE +  E ML+R F +F  
Sbjct: 604 ILMI-DEKMDPPVAKSMLKGEADRLDSAFHLSYNMILNLLRVEGISPEFMLERCFFQFQN 662

Query: 466 QKDLPEKEKLL 498
             ++P+ E  L
Sbjct: 663 SLEVPKLEAKL 673



 Score = 56.6 bits (135), Expect = 6e-08
 Identities = 24/38 (63%), Positives = 32/38 (84%)
 Frame = +3

Query: 30  GIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXICYG 143
           GIG+HH+GLLPI+KEV+E+LF  G++KVLF+TE    G
Sbjct: 519 GIGIHHSGLLPILKEVIEILFQEGLLKVLFATETFSIG 556

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>SK2L2_MOUSE (Q9CZU3) Superkiller viralicidic activity 2-like 2 (EC 3.6.1.-)|
           (ATP-dependent helicase SKIV2L2)
          Length = 1040

 Score =  119 bits (298), Expect = 8e-27
 Identities = 64/125 (51%), Positives = 83/125 (66%)
 Frame = +1

Query: 106 LRYCFPPXTFAMGVNAPARTVVFDTLRKFDGKEHRRLLPGEYIQMAGRAGRRGLDTIGTV 285
           ++  F   TFAMG+N PARTV+F   RK+DGK+ R +  GEYIQM+GRAGRRG+D  G V
Sbjct: 474 IKALFATETFAMGINMPARTVLFTNARKYDGKDFRWISSGEYIQMSGRAGRRGMDDRGIV 533

Query: 286 IMMCRDEIPEESDLKNLLVGKPTRLESQFRLTYTMILHLLRVEELKVEDMLKRSFAEFHA 465
           I+M  DE    +  K LL G    L S F LTY M+L+LLRVEE+  E ML++SF +F  
Sbjct: 534 ILMV-DEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQH 592

Query: 466 QKDLP 480
            + +P
Sbjct: 593 YRAIP 597



 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 23/38 (60%), Positives = 29/38 (76%)
 Frame = +3

Query: 30  GIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXICYG 143
           GIG+HH GLLPI+KE +E+LF  G+IK LF+TE    G
Sbjct: 449 GIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMG 486

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>MTR4_YEAST (P47047) ATP-dependent RNA helicase DOB1 (EC 3.6.1.-) (mRNA|
           transport regulator MTR4)
          Length = 1073

 Score =  117 bits (294), Expect = 2e-26
 Identities = 65/134 (48%), Positives = 89/134 (66%)
 Frame = +1

Query: 106 LRYCFPPXTFAMGVNAPARTVVFDTLRKFDGKEHRRLLPGEYIQMAGRAGRRGLDTIGTV 285
           L+  F   TF++G+N PA+TVVF ++RK+DG++ R +  GEYIQM+GRAGRRGLD  G V
Sbjct: 496 LKVLFATETFSIGLNMPAKTVVFTSVRKWDGQQFRWVSGGEYIQMSGRAGRRGLDDRGIV 555

Query: 286 IMMCRDEIPEESDLKNLLVGKPTRLESQFRLTYTMILHLLRVEELKVEDMLKRSFAEFHA 465
           IMM  DE  E    K ++ G+  RL+S F L Y MIL+L+RVE +  E ML+ SF +F  
Sbjct: 556 IMMI-DEKMEPQVAKGMVKGQADRLDSAFHLGYNMILNLMRVEGISPEFMLEHSFFQFQN 614

Query: 466 QKDLPEKEKLLLQM 507
              +P  EK L ++
Sbjct: 615 VISVPVMEKKLAEL 628



 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 24/38 (63%), Positives = 31/38 (81%)
 Frame = +3

Query: 30  GIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXICYG 143
           GIG+HH+GLLPI+KEV+E+LF  G +KVLF+TE    G
Sbjct: 471 GIGIHHSGLLPILKEVIEILFQEGFLKVLFATETFSIG 508

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>YE02_SCHPO (O13799) Putative helicase C17H9.02 (EC 3.6.1.-)|
          Length = 1030

 Score =  115 bits (287), Expect = 1e-25
 Identities = 61/139 (43%), Positives = 91/139 (65%)
 Frame = +1

Query: 106 LRYCFPPXTFAMGVNAPARTVVFDTLRKFDGKEHRRLLPGEYIQMAGRAGRRGLDTIGTV 285
           +R  F   TF++G+N PARTV+F   +KF G   R L  GEY+QM+GRAGRRG+DT G  
Sbjct: 460 VRILFATETFSIGLNMPARTVLFTKAQKFSGNNFRWLTSGEYMQMSGRAGRRGIDTKGLS 519

Query: 286 IMMCRDEIPEESDLKNLLVGKPTRLESQFRLTYTMILHLLRVEELKVEDMLKRSFAEFHA 465
           I++    I E++  + L+ G+   L S F L+Y MIL+L+R+EE+  ED+LK+SF +F  
Sbjct: 520 IVILDQSIDEQA-ARCLMNGQADVLNSAFHLSYGMILNLMRIEEISPEDILKKSFYQFQN 578

Query: 466 QKDLPEKEKLLLQMLRQPT 522
            + LP  ++ L+Q+  + T
Sbjct: 579 MESLPLIKEELMQLKNEET 597



 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 22/38 (57%), Positives = 32/38 (84%)
 Frame = +3

Query: 30  GIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXICYG 143
           GIG+HH+GLLPI+KE+VE+LF  G++++LF+TE    G
Sbjct: 435 GIGIHHSGLLPILKELVEILFQEGLVRILFATETFSIG 472

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>HELY_MYCTU (Q10701) Probable helicase helY (EC 3.6.1.-)|
          Length = 906

 Score = 91.3 bits (225), Expect = 2e-18
 Identities = 50/130 (38%), Positives = 79/130 (60%), Gaps = 1/130 (0%)
 Frame = +1

Query: 91  FVAV*LRYCFPPXTFAMGVNAPARTVVFDTLRKFDGKEHRRLLPGEYIQMAGRAGRRGLD 270
           F A  ++  F   T A+G+N PARTVV + L KF+G++H  L PGEY Q+ GRAGRRG+D
Sbjct: 359 FTAGLVKAVFATETLALGINMPARTVVLERLVKFNGEQHMPLTPGEYTQLTGRAGRRGID 418

Query: 271 TIGTVIMMCRDEIPEESDLKNLLVGKPTRLESQFRLTYTMILHLL-RVEELKVEDMLKRS 447
             G  +++   EI E S++  L   +   L S F  +Y M ++L+ R+   +   +L++S
Sbjct: 419 VEGHAVVIWHPEI-EPSEVAGLASTRTFPLRSSFAPSYNMTINLVHRMGPQQAHRLLEQS 477

Query: 448 FAEFHAQKDL 477
           FA++ A + +
Sbjct: 478 FAQYQADRSV 487



 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 17/38 (44%), Positives = 25/38 (65%)
 Frame = +3

Query: 30  GIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXICYG 143
           G+  HHAG+LP  +  VE LF  G++K +F+TE +  G
Sbjct: 339 GLAAHHAGMLPAFRHTVEELFTAGLVKAVFATETLALG 376

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>HELY_MYCLE (Q9ZBD8) Probable helicase helY (EC 3.6.1.-)|
          Length = 920

 Score = 84.0 bits (206), Expect = 4e-16
 Identities = 49/132 (37%), Positives = 75/132 (56%), Gaps = 3/132 (2%)
 Frame = +1

Query: 91  FVAV*LRYCFPPXTFAMGVNAPARTVVFDTLRKFDGKEHRRLLPGEYIQMAGRAGRRGLD 270
           F A  ++  F   T A+G+N PARTVV + L KF+GK+H  L PGEY Q+ GRAGRRG+D
Sbjct: 362 FTAGLVKAVFATETLALGINMPARTVVLERLVKFNGKQHVPLTPGEYTQLTGRAGRRGID 421

Query: 271 TIG--TVIMMCRDEIPEESDLKNLLVGKPTRLESQFRLTYTMILHLLR-VEELKVEDMLK 441
             G   VI    ++    S +  L   +   L S F  +Y M ++L+  +   +   +L+
Sbjct: 422 VEGHAVVIWHPSEDTSGPSAVAGLASARTFPLRSSFVPSYNMTINLVHWMSPERAHALLE 481

Query: 442 RSFAEFHAQKDL 477
           +SFA++ A + +
Sbjct: 482 QSFAQYQADRSV 493



 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 17/38 (44%), Positives = 25/38 (65%)
 Frame = +3

Query: 30  GIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXICYG 143
           G+  HHAG+LP  +  VE LF  G++K +F+TE +  G
Sbjct: 342 GLAAHHAGMLPAFRHAVEELFTAGLVKAVFATETLALG 379

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>HELS_AERPE (Q9YFQ8) Putative ski2-type helicase (EC 3.6.1.-)|
          Length = 702

 Score = 55.5 bits (132), Expect(2) = 1e-13
 Identities = 31/80 (38%), Positives = 42/80 (52%)
 Frame = +1

Query: 130 TFAMGVNAPARTVVFDTLRKFDGKEHRRLLPGEYIQMAGRAGRRGLDTIGTVIMMCRDEI 309
           T A GVN PAR VV D+  +++      +   EY QMAGRAGR GLD  G  I++     
Sbjct: 307 TLAAGVNLPARRVVIDSYYRYEAGFREPIRVAEYKQMAGRAGRPGLDEFGEAIIVAERLD 366

Query: 310 PEESDLKNLLVGKPTRLESQ 369
             E  +   +   P R+ES+
Sbjct: 367 RPEDLISGYIRAPPERVESR 386



 Score = 40.4 bits (93), Expect(2) = 1e-13
 Identities = 18/40 (45%), Positives = 25/40 (62%)
 Frame = +3

Query: 24  AXGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXICYG 143
           A GI  HHAGL P +++ VE  F  G +KV++ST  +  G
Sbjct: 272 AAGIAYHHAGLPPSLRKTVEEAFRAGAVKVVYSTPTLAAG 311

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>HELS_SULSO (Q97VY9) Putative ski2-type helicase (EC 3.6.1.-)|
          Length = 708

 Score = 57.8 bits (138), Expect(2) = 5e-12
 Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
 Frame = +1

Query: 130 TFAMGVNAPARTVVFDTLRKFDGK---EHRRLLPGEYIQMAGRAGRRGLDTIGTVIMMCR 300
           T A GVN PARTV+   + +F+ K    +  +   EY QM+GRAGR G D IG  I++ R
Sbjct: 340 TLAAGVNLPARTVIIGDIYRFNRKIVGYYDEIPVMEYKQMSGRAGRPGFDQIGESIIVVR 399

Query: 301 DEIPEESDLKNLLVGKPTRLESQF---RLTYTMILHLLRVEELKVEDMLK 441
           D+   +   K  ++     +ES+    R  YT +L +L  E    E  L+
Sbjct: 400 DKEDVDRVFKKYILSDVEPIESKLGSERAFYTFLLGILSAEGSLSEKQLE 449



 Score = 32.3 bits (72), Expect(2) = 5e-12
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +3

Query: 30  GIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXICYG 143
           G+  HHAGL   +++++E  F +  IKV+ +T  +  G
Sbjct: 307 GVAYHHAGLSKALRDIIEESFRKRKIKVIVATPTLAAG 344

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>HELS_SULTO (Q974S1) Putative ski2-type helicase (EC 3.6.1.-)|
          Length = 704

 Score = 50.4 bits (119), Expect(2) = 2e-09
 Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 6/125 (4%)
 Frame = +1

Query: 130 TFAMGVNAPARTVVFDTLRKFDGKE--HRRLLPG-EYIQMAGRAGRRGLDTIGTVIMMCR 300
           T A GVN PAR VV   + +++ K   +  L+P  +Y QM+GRAGR G D  G  +++ R
Sbjct: 342 TLAAGVNLPARAVVIGDIYRYNRKVVGYMDLIPVMDYKQMSGRAGRPGFDENGEAVVVVR 401

Query: 301 DEIPEESDLKNLLVGKPTRLESQF---RLTYTMILHLLRVEELKVEDMLKRSFAEFHAQK 471
           ++   E   +  L+     +ES+       Y+ ++ ++  E  K  + L     E    K
Sbjct: 402 NKREAEKVYERYLMSDVEPIESKLGSESAFYSFLISIIASEGEKTTEELMEYVKETLLPK 461

Query: 472 DLPEK 486
           +L +K
Sbjct: 462 ELAKK 466



 Score = 31.2 bits (69), Expect(2) = 2e-09
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +3

Query: 30  GIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXICYG 143
           G+  HHAGL   +++++E  F   ++KV+ +T  +  G
Sbjct: 309 GVAYHHAGLSKGLRDIIESSFRDRILKVIVATPTLAAG 346

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>HELS_METMA (Q8PZR7) Putative ski2-type helicase (EC 3.6.1.-)|
          Length = 730

 Score = 45.1 bits (105), Expect(2) = 2e-08
 Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
 Frame = +1

Query: 130 TFAMGVNAPARTVVFDTLRKFDGKEHRRLLPG-EYIQMAGRAGRRGLDTIGTVIMMCR 300
           T A G+N PAR V+  + R++      + +P  EY QMAGRAGR  LD  G  +++ +
Sbjct: 338 TLAAGLNLPARRVIIRSYRRYSSDSGMQPIPVLEYKQMAGRAGRPRLDPYGEAVLLAK 395



 Score = 32.7 bits (73), Expect(2) = 2e-08
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +3

Query: 30  GIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXICYG 143
           G   HHAGL   ++E+VE  F  G IK++ ST  +  G
Sbjct: 305 GTAFHHAGLTTPLRELVENGFREGRIKIISSTPTLAAG 342

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>HELS_METAC (Q8TL39) Putative ski2-type helicase (EC 3.6.1.-)|
          Length = 730

 Score = 45.1 bits (105), Expect(2) = 2e-08
 Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
 Frame = +1

Query: 130 TFAMGVNAPARTVVFDTLRKFDGKEHRRLLPG-EYIQMAGRAGRRGLDTIGTVIMMCR 300
           T A G+N PAR V+  + R++      + +P  EY QMAGRAGR  LD  G  +++ +
Sbjct: 338 TLAAGLNLPARRVIIRSYRRYSSDSGMQPIPVLEYKQMAGRAGRPRLDPYGEAVLLAK 395



 Score = 32.7 bits (73), Expect(2) = 2e-08
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 30  GIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXICYG 143
           G   HHAGL   ++E+VE  F  G +K++ ST  +  G
Sbjct: 305 GTAFHHAGLTSPLRELVETGFREGYVKLISSTPTLAAG 342

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>SLH1_YEAST (P53327) Antiviral helicase SLH1 (EC 3.6.1.-) (SKI2-like helicase 1)|
          Length = 1967

 Score = 42.0 bits (97), Expect(2) = 4e-08
 Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
 Frame = +1

Query: 130  TFAMGVNAPARTVVFDTLRKFDGK--EHRRLLPGEYIQMAGRAGRRGLDTIGTVIMMCRD 303
            T A GVN PA  V+    + FD K   +R +   + +QM GRAGR   DT GT I+  ++
Sbjct: 1463 TLAWGVNLPAHLVIIKGTQFFDAKIEGYRDMDLTDILQMMGRAGRPAYDTTGTAIVYTKE 1522



 Score = 35.0 bits (79), Expect(2) = 4e-08
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +3

Query: 30   GIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXICYG 143
            GIG+HHAGL+   + +   LF +  I++L +T  + +G
Sbjct: 1430 GIGLHHAGLVQKDRSISHQLFQKNKIQILIATSTLAWG 1467



 Score = 35.0 bits (79), Expect = 0.19
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 30  GIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXICYG 143
           G G+HHAG+    + + E +F  G IKVL  T  + +G
Sbjct: 594 GFGIHHAGMARSDRNLTEKMFKDGAIKVLCCTATLAWG 631

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>YP93_CAEEL (Q09475) Putative helicase C28H8.3 (EC 3.6.1.-)|
          Length = 1714

 Score = 56.2 bits (134), Expect = 8e-08
 Identities = 45/125 (36%), Positives = 59/125 (47%), Gaps = 9/125 (7%)
 Frame = +1

Query: 106  LRYCFPPXTFAMGVNAPARTVVFDTLRKFDGKEHRRLLPGEYIQMAGRAGRRGLDTIGTV 285
            L   F   T ++GVN P +TV+F       G +  +L P  Y QM+GRAGRRG D  G V
Sbjct: 1306 LAVLFSTSTLSLGVNMPCKTVMF-------GVDTLQLTPLLYRQMSGRAGRRGFDHSGNV 1358

Query: 286  IMMCRDEIPEESDLKNLLVGKPTRLESQFRLTYTMILHL---------LRVEELKVEDML 438
            I M    IP  S ++ LL    + L+     T   +L L         L  E  KV  M 
Sbjct: 1359 IFM---SIP-TSKVRRLLTASLSNLQGNPPFTVLFLLRLFAYVHQQDILNEEGQKVSTMK 1414

Query: 439  KRSFA 453
            +R+FA
Sbjct: 1415 QRAFA 1419



 Score = 39.7 bits (91), Expect = 0.008
 Identities = 19/38 (50%), Positives = 24/38 (63%)
 Frame = +3

Query: 30   GIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXICYG 143
            GIG HHAGL  + +  VE+LF  G + VLFST  +  G
Sbjct: 1281 GIGYHHAGLNTVERGAVEVLFRSGNLAVLFSTSTLSLG 1318

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>BRR2_YEAST (P32639) Pre-mRNA-splicing helicase BRR2 (EC 3.6.1.-) (Protein|
            Snu246)
          Length = 2163

 Score = 39.7 bits (91), Expect(2) = 2e-07
 Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
 Frame = +1

Query: 130  TFAMGVNAPARTVVFDTLRKFDGKEH--RRLLPGEYIQMAGRAGRRGLDTIGTVIMMCRD 303
            T A GVN PA TV+      +  ++    +L P + +QM GRAGR   DT G  I+    
Sbjct: 833  TLAWGVNLPAHTVIIKGTDVYSPEKGSWEQLSPQDVLQMLGRAGRPRYDTFGEGII---- 888

Query: 304  EIPEESDLKNLL--VGKPTRLESQF 372
             I ++S+++  L  + +   +ESQF
Sbjct: 889  -ITDQSNVQYYLSVLNQQLPIESQF 912



 Score = 35.0 bits (79), Expect(2) = 2e-07
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = +3

Query: 30  GIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXICYG 143
           GIG HHAGL    + + E LF  G+++VL  T  + +G
Sbjct: 800 GIGTHHAGLTRSDRSLSEDLFADGLLQVLVCTATLAWG 837

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>HELS_PYRAB (Q9V0A9) Putative ski2-type helicase (EC 3.6.1.-)|
          Length = 715

 Score = 44.3 bits (103), Expect(2) = 2e-07
 Identities = 46/139 (33%), Positives = 69/139 (49%), Gaps = 12/139 (8%)
 Frame = +1

Query: 130 TFAMGVNAPA-RTVVFDTLRKFD-GKEHRRLLPGEYIQMAGRAGRRGLDTIGTVIMMCRD 303
           T + G+N PA R ++ DT R  + G E   +L  E  QM GRAGR   D +G  I++   
Sbjct: 329 TLSAGINTPAFRVIIRDTWRYSEFGMERIPVL--EVQQMMGRAGRPRYDEVGEAIIVSTT 386

Query: 304 EIPEESDLKNLLVGKPTRLESQF---RLTYTMILHLLRV----EELKVEDMLKRSFAEFH 462
           E P    + + + GKP +L SQ     +  + IL L+      E  ++ D L+R+F   H
Sbjct: 387 EEP-SLVIDHYIKGKPEKLFSQLSNESILRSQILALIATFGYSEFKEIYDFLERTFYA-H 444

Query: 463 AQKD---LPEKEKLLLQML 510
             KD   L EK + ++  L
Sbjct: 445 QGKDPYMLEEKIRRIIYFL 463



 Score = 30.0 bits (66), Expect(2) = 2e-07
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +3

Query: 30  GIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXICYG 143
           G+  HHAGL    + +VE  F +G+IKV+ +T  +  G
Sbjct: 296 GVAFHHAGLGRDERVLVEDNFRKGLIKVVVATPTLSAG 333

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>HELS_PYRHO (O59025) Putative ski2-type helicase (EC 3.6.1.-)|
          Length = 715

 Score = 43.1 bits (100), Expect(2) = 4e-07
 Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
 Frame = +1

Query: 130 TFAMGVNAPA-RTVVFDTLRKFD-GKEHRRLLPGEYIQMAGRAGRRGLDTIGTVIMMCRD 303
           T + G+N PA R +V DT R  + G E   +L  E  QM GRAGR   D +G  I++   
Sbjct: 329 TLSAGINTPAFRVIVRDTWRYSEFGMERIPIL--EIQQMMGRAGRPKYDEVGEAIIVSTT 386

Query: 304 EIPEESDLKNLLVGKPTRLESQF---RLTYTMILHLLRVEEL----KVEDMLKRSFAEFH 462
           E P  + ++  + GKP +L SQ     +    IL L+         ++ D L+R+F  + 
Sbjct: 387 EEP-STVMERYIKGKPEKLFSQLSNESILRGQILALIATFNFSSFREIYDFLERTFYAYQ 445

Query: 463 AQ 468
            +
Sbjct: 446 GK 447



 Score = 30.4 bits (67), Expect(2) = 4e-07
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +3

Query: 30  GIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXICYG 143
           G+  HHAGL    + +VE  F +G+IKV+ +T  +  G
Sbjct: 296 GVAFHHAGLGREERVLVEENFKKGLIKVVVATPTLSAG 333

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>HELS_PYRFU (O73946) Putative ski2-type helicase (EC 3.6.1.-)|
          Length = 720

 Score = 43.1 bits (100), Expect(2) = 6e-07
 Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 9/136 (6%)
 Frame = +1

Query: 130 TFAMGVNAPARTVVFDTLRKFDGKEHRRLLPGEYIQMAGRAGRRGLDTIGTVIMMCRDEI 309
           T + G+N PA  V+   + ++      R+   E  QM GRAGR   D +G  I++   + 
Sbjct: 329 TLSAGINTPAFRVIIRDIWRYSDFGMERIPIIEVHQMLGRAGRPKYDEVGEGIIVSTSDD 388

Query: 310 PEESDLKNLLVGKPTRLESQF----RLTYTMILHLLRVEELKVEDMLKRSFAEFHA--QK 471
           P E  + + + GKP +L SQ      L   ++  +       VE++LK     F+A  +K
Sbjct: 389 PREV-MNHYIFGKPEKLFSQLSNESNLRSQVLALIATFGYSTVEEILKFISNTFYAYQRK 447

Query: 472 D---LPEKEKLLLQML 510
           D   L EK + +L  L
Sbjct: 448 DTYSLEEKIRNILYFL 463



 Score = 29.6 bits (65), Expect(2) = 6e-07
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +3

Query: 30  GIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXICYG 143
           G+  HHAGL    + +VE  F +G+IK + +T  +  G
Sbjct: 296 GVAFHHAGLGRDERVLVEENFRKGIIKAVVATPTLSAG 333

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>HFM1_YEAST (P51979) ATP-dependent DNA helicase MER3 (EC 3.6.1.-) (HFM1|
           protein)
          Length = 1188

 Score = 42.7 bits (99), Expect(2) = 8e-07
 Identities = 32/108 (29%), Positives = 52/108 (48%)
 Frame = +1

Query: 130 TFAMGVNAPARTVVFDTLRKFDGKEHRRLLPGEYIQMAGRAGRRGLDTIGTVIMMCRDEI 309
           T A+GVN PA  V+    + ++  E +     + +QM GRAGR   +T G  ++M   ++
Sbjct: 452 TLAVGVNLPAYLVIIKGTKSWNSSEIQEYSDLDVLQMIGRAGRPQFETHGCAVIMTDSKM 511

Query: 310 PEESDLKNLLVGKPTRLESQFRLTYTMILHLLRVEELKVEDMLKRSFA 453
             +   +NL+ G    LES         LHL  +E L  E  L+  ++
Sbjct: 512 --KQTYENLIHGTDV-LESS--------LHLNLIEHLAAETSLETVYS 548



 Score = 29.6 bits (65), Expect(2) = 8e-07
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +3

Query: 30  GIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXICYG 143
           GI  HHAG+    +  VE  F  G I +L ST  +  G
Sbjct: 419 GIAFHHAGISLEDRTAVEKEFLAGSINILCSTSTLAVG 456

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>HELS_HALMA (Q5UYM9) Putative ski2-type helicase (EC 3.6.1.-)|
          Length = 799

 Score = 43.9 bits (102), Expect(2) = 1e-06
 Identities = 30/71 (42%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
 Frame = +1

Query: 115 CFPPXTFAMGVNAPARTVVFDTLRKFDGKEHRR--LLPGEYIQMAGRAGRRGLDTIGTVI 288
           C  P T A GVN P+R VV    R++DG       L   E  QM GRAGR GLD  G  +
Sbjct: 337 CATP-TLAAGVNTPSRRVVVRDWRRYDGSAGGMAPLSVLEVHQMMGRAGRPGLDPYGEAV 395

Query: 289 MMC--RDEIPE 315
           ++    DE+ E
Sbjct: 396 LIASSHDEVDE 406



 Score = 28.1 bits (61), Expect(2) = 1e-06
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +3

Query: 24  AXGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXICYG 143
           A G   HHAGL    +E+VE  F   ++KV+ +T  +  G
Sbjct: 306 ADGAAFHHAGLSRGHRELVEDAFRDRLVKVVCATPTLAAG 345

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>HELS_METTH (O26901) Putative ski2-type helicase (EC 3.6.1.-)|
          Length = 690

 Score = 40.0 bits (92), Expect(2) = 1e-06
 Identities = 24/67 (35%), Positives = 35/67 (52%)
 Frame = +1

Query: 142 GVNAPARTVVFDTLRKFDGKEHRRLLPGEYIQMAGRAGRRGLDTIGTVIMMCRDEIPEES 321
           GVN P+RTVV     ++  +  RR+   +Y QM+GRAGR   D  G   ++ R    E  
Sbjct: 329 GVNLPSRTVVIRDYTRWTSQGPRRIPVFDYEQMSGRAGRPQYDDAGYSYLIARSH-DEAM 387

Query: 322 DLKNLLV 342
           DL+   +
Sbjct: 388 DLEEYYI 394



 Score = 31.6 bits (70), Expect(2) = 1e-06
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 30  GIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXICYG 143
           GI  HHAGL    +E++E  F  G I ++ +T  + YG
Sbjct: 292 GIAFHHAGLFNRQREIIEDEFRDGNILMITATPSLMYG 329

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>U520_DROME (Q9VUV9) Putative U5 small nuclear ribonucleoprotein 200 kDa helicase|
            (EC 3.6.1.-)
          Length = 2142

 Score = 37.7 bits (86), Expect(2) = 2e-06
 Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
 Frame = +1

Query: 130  TFAMGVNAPARTVVFDTLRKFDGKEHR--RLLPGEYIQMAGRAGRRGLDTIGTVIMMCRD 303
            T A GVN PA TV+    + ++ ++ R   L   + +QM GRAGR   DT G  I++   
Sbjct: 814  TLAWGVNLPAHTVIIKGTQVYNPEKGRWVELSALDVLQMLGRAGRPQYDTKGEGILITNH 873

Query: 304  EIPEESDLKNLLVGKPTRLESQF 372
                E      L+ +   +ESQF
Sbjct: 874  ---SELQFYLSLLNQQLPIESQF 893



 Score = 33.5 bits (75), Expect(2) = 2e-06
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +3

Query: 30  GIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXICYG 143
           G  +HHAG+  + + +VE LF    I+VL ST  + +G
Sbjct: 781 GFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWG 818



 Score = 28.9 bits (63), Expect(2) = 0.022
 Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
 Frame = +1

Query: 142  GVNAPARTVVFDTLRKFDGKEH--RRLLPGEYIQMAGRAGRRGLDTIGTVIMMCRDEIPE 315
            G++  A  V+    + ++GK H        + +QM GRA R   D     ++MC+     
Sbjct: 1652 GMSISAHLVIIMDTQFYNGKNHSYEDYPITDVLQMIGRANRPNEDADAKCVLMCQS---S 1708

Query: 316  ESDLKNLLVGKPTRLES 366
            + D     + +P  +ES
Sbjct: 1709 KKDFFKKFINEPLPIES 1725



 Score = 28.1 bits (61), Expect(2) = 0.022
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +3

Query: 24   AXGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXICYG 143
            A G+   H GL      +VE LF  G ++V   +  +C+G
Sbjct: 1613 AQGVAYLHEGLSASDHRLVEQLFDSGAVQVAVISRDLCWG 1652

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>HELS_HALSA (Q9HMV6) Putative ski2-type helicase (EC 3.6.1.-)|
          Length = 783

 Score = 43.1 bits (100), Expect(2) = 2e-06
 Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
 Frame = +1

Query: 130 TFAMGVNAPARTVVFDTLRKFDGKEH--RRLLPGEYIQMAGRAGRRGLDTIGTVIMMCRD 303
           T A GVN PAR VV    +++DG     + L   E  QM GRAGR GLD  G  +++   
Sbjct: 349 TLAAGVNTPARRVVVRDWQRYDGTAGGMQPLDVLEVHQMFGRAGRPGLDPYGEAVLLANS 408

Query: 304 EIPEESDLKNLLVGKPTRLESQFRLTYTMILHLL 405
               E      +   P  + S+      +  H+L
Sbjct: 409 HDELEELFDRYVYADPEPVRSKLAAEPALRTHVL 442



 Score = 28.1 bits (61), Expect(2) = 2e-06
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +3

Query: 24  AXGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXICYG 143
           A G   HHAGL    +E+VE  F   ++K + +T  +  G
Sbjct: 314 ASGAAFHHAGLAREHRELVEEAFRDRLVKAVSATPTLAAG 353

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>HELS_THEVO (Q97AI2) Putative ski2-type helicase (EC 3.6.1.-)|
          Length = 674

 Score = 44.3 bits (103), Expect(2) = 2e-06
 Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 12/141 (8%)
 Frame = +1

Query: 130 TFAMGVNAPARTVVFDTLRKFDGKEHRRLLPGEYIQMAGRAGRRGLDTIGTVIM------ 291
           T A GVN PAR V+   + ++       L   E  QM GRAGR G D  G  I+      
Sbjct: 320 TLAAGVNLPARLVIVKDVTRYGDLGITYLSNMEVKQMIGRAGRPGYDQYGIGIIYAASAN 379

Query: 292 ---MCRDEIPEESDLKNLLVGKPTRLESQFRLTYTMILHLLRVEELKVEDMLKRSFAEFH 462
              + ++ I EE +  +  +GKP ++      T   I   L   ++++E+  + +F  ++
Sbjct: 380 SYQVVKEYISEEPEPVDSYIGKPEKVRFN---TLAAIAMGLATSQVEMEEFYRSTF--YY 434

Query: 463 AQK---DLPEKEKLLLQMLRQ 516
           AQ    ++P +    ++ L++
Sbjct: 435 AQNGEDEIPNRINESIKFLKE 455



 Score = 26.9 bits (58), Expect(2) = 2e-06
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +3

Query: 30  GIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXICYG 143
           G+  HHAGL    +  +E  F    +KV+ +T  +  G
Sbjct: 287 GVSFHHAGLSNEQRSFIEKAFRHRKLKVIVATPTLAAG 324

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>U520_HUMAN (O75643) U5 small nuclear ribonucleoprotein 200 kDa helicase (EC|
            3.6.1.-) (U5 snRNP-specific 200 kDa protein) (U5-200KD)
            (Activating signal cointegrator 1 complex subunit 3-like
            1) (BRR2 homolog)
          Length = 2136

 Score = 38.5 bits (88), Expect(2) = 5e-05
 Identities = 15/38 (39%), Positives = 25/38 (65%)
 Frame = +3

Query: 30   GIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXICYG 143
            G+G  H GL P+ + +VE LF  G I+V+ ++  +C+G
Sbjct: 1616 GVGYLHEGLSPMERRLVEQLFSSGAIQVVVASRSLCWG 1653



 Score = 35.4 bits (80), Expect(2) = 8e-06
 Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
 Frame = +1

Query: 130 TFAMGVNAPARTVVFDTLRKFDGKEHRRLLPG--EYIQMAGRAGRRGLDTIGTVIMM 294
           T A GVN PA TV+    + +  ++ R    G  + +QM GRAGR   DT G  I++
Sbjct: 814 TLAWGVNLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDTKGEGILI 870



 Score = 33.5 bits (75), Expect(2) = 8e-06
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +3

Query: 30  GIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXICYG 143
           G  +HHAG+  + + +VE LF    I+VL ST  + +G
Sbjct: 781 GFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWG 818



 Score = 27.7 bits (60), Expect(2) = 5e-05
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +1

Query: 142  GVNAPARTVVFDTLRKFDGKEHRRLLPGEY--IQMAGRAGRRGLDTIGTVIMMCR 300
            G+N  A  V+    + ++GK H  +    Y  +QM G A R   D  G  ++MC+
Sbjct: 1653 GMNVAAHLVIIMDTQYYNGKIHAYVDYPIYDVLQMVGHANRPLQDDEGRCVIMCQ 1707

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>YBBA_SCHPO (O60072) Putative helicase C13G1.10c (EC 3.6.1.-)|
          Length = 1935

 Score = 34.3 bits (77), Expect = 0.32
 Identities = 13/37 (35%), Positives = 24/37 (64%)
 Frame = +3

Query: 33  IGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXICYG 143
           +G+H+AG+L   + + E LF  G++K+L  T  + +G
Sbjct: 588 MGIHNAGMLRSDRHLTERLFSMGILKILCCTATLAWG 624



 Score = 33.9 bits (76), Expect(2) = 3e-05
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = +1

Query: 130  TFAMGVNAPARTVVFDTLRKFDGK--EHRRLLPGEYIQMAGRAGRRGLDTIGTVIMMCRD 303
            T A GVN PA  V+      +D K   ++ +   + +QM GRAGR   D  G   +  +D
Sbjct: 1455 TLAWGVNTPAHLVIVKGTEYYDAKIGGYKDMDLTDVLQMLGRAGRPQFDNSGVARIFVQD 1514



 Score = 33.1 bits (74), Expect(2) = 3e-05
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +3

Query: 30   GIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXICYG 143
            GI +HHAGL    +++ E LF    +++L +T  + +G
Sbjct: 1422 GIALHHAGLTENDRKISEELFVNNKVQILIATSTLAWG 1459

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>HELS_THEAC (Q9HJX7) Putative ski2-type helicase (EC 3.6.1.-)|
          Length = 674

 Score = 36.2 bits (82), Expect(2) = 9e-04
 Identities = 21/50 (42%), Positives = 25/50 (50%)
 Frame = +1

Query: 130 TFAMGVNAPARTVVFDTLRKFDGKEHRRLLPGEYIQMAGRAGRRGLDTIG 279
           T A GVN PAR V+   + ++       L   E  QM GRAGR G D  G
Sbjct: 320 TLAAGVNLPARLVIVRDITRWGSDGISYLTNMEIKQMIGRAGRPGYDQYG 369



 Score = 25.8 bits (55), Expect(2) = 9e-04
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +3

Query: 30  GIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXICYG 143
           G+  HHAGL    +  +E  F    IKV+ +T  +  G
Sbjct: 287 GVAFHHAGLSNDQRAFIEREFRARRIKVIVATPTLAAG 324

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>HELC1_HUMAN (Q8N3C0) Activating signal cointegrator 1 complex subunit 3 (EC|
            3.6.1.-) (ASC-1 complex subunit p200) (Trip4 complex
            subunit p200) (Helicase, ATP binding 1)
          Length = 2202

 Score = 39.3 bits (90), Expect = 0.010
 Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
 Frame = +1

Query: 91   FVAV*LRYCFPPXTFAMGVNAPARTVVFDTLRKFDGKEHRRL-LP-GEYIQMAGRAGRRG 264
            FV   ++      T A GVN PA  V+      +DGK  R +  P  + +QM GRAGR  
Sbjct: 1635 FVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEYYDGKTRRYVDFPITDVLQMMGRAGRPQ 1694

Query: 265  LDTIGTVIMMCRD 303
             D  G  +++  D
Sbjct: 1695 FDDQGKAVILVHD 1707



 Score = 37.0 bits (84), Expect = 0.050
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = +3

Query: 30  GIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXICYG 143
           G  +HHAG+L   + +VE LF  G IKVL  T  + +G
Sbjct: 778 GFSIHHAGMLRQDRNLVENLFSNGHIKVLVCTATLAWG 815



 Score = 36.2 bits (82), Expect = 0.085
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = +3

Query: 24   AXGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXICYG 143
            A GIG+HHAGL    ++ VE LF    ++VL +T  + +G
Sbjct: 1613 AFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWG 1652

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>Y1401_METJA (Q58796) Probable ATP-dependent helicase MJ1401 (EC 3.6.1.-)|
          Length = 808

 Score = 38.5 bits (88), Expect = 0.017
 Identities = 22/51 (43%), Positives = 32/51 (62%)
 Frame = +1

Query: 142 GVNAPARTVVFDTLRKFDGKEHRRLLPGEYIQMAGRAGRRGLDTIGTVIMM 294
           GV+ PA TV+ ++L    G +   L P E+ QM GRAGR+G+  IG V ++
Sbjct: 494 GVDFPASTVILESLAM--GADW--LNPAEFQQMCGRAGRKGMHEIGKVYLL 540

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>HELS_METJA (Q58524) Putative ski2-type helicase (EC 3.6.1.-) [Contains:|
            Endonuclease PI-MjaHel (EC 3.1.-.-) (Mja Hel intein) (Mja
            Pep3 intein)]
          Length = 1195

 Score = 38.5 bits (88), Expect = 0.017
 Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
 Frame = +1

Query: 142  GVNAPARTVVFDTLRKFDGKEHRRLLPGEYIQMAGRAGRRGLDTIGTVIMMCRDEIPEES 321
            G+N P R  +   L +F  K  R +   E  Q  GRAGR GLD  G  I++ +++  +  
Sbjct: 841  GLNLPCRRAIVKDLTRFTNKGMRYIPIMEIQQCIGRAGRPGLDPYGEGIIVAKND-RDYL 899

Query: 322  DLKNLLVGKPTRLESQF---RLTYTMILHLLRVEELKVEDMLK---RSFAEFHAQKDLPE 483
                 L  KP  + S+     +  T +L L+   E++ E  L+   R+    H   +L E
Sbjct: 900  RAYQALTQKPEPIYSKLSNQAVLRTQLLGLIATGEIRDEYDLEWFIRNTFYAHQYGNLRE 959

Query: 484  KEKLLLQMLR 513
              K + +++R
Sbjct: 960  VAKNINEVIR 969



 Score = 29.6 bits (65), Expect = 7.9
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 30  GIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXIC 137
           G   HHAGL    +++VE  F + +IKV+  T  +C
Sbjct: 303 GSAFHHAGLTYQHRKIVEDAFRKRLIKVICCTPTLC 338

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>U520_CAEEL (Q9U2G0) Putative U5 small nuclear ribonucleoprotein 200 kDa|
           helicase (EC 3.6.1.-)
          Length = 2145

 Score = 35.4 bits (80), Expect = 0.14
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = +3

Query: 30  GIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXICYG 143
           G  +HHAG+  + + +VE LF    I+VLFST  + +G
Sbjct: 774 GFAIHHAGMNRVDRTLVEDLFADRHIQVLFSTATLAWG 811



 Score = 34.7 bits (78), Expect = 0.25
 Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
 Frame = +1

Query: 106 LRYCFPPXTFAMGVNAPARTVVFDTLRKFDGKEHRRLLPG--EYIQMAGRAGRRGLDTIG 279
           ++  F   T A GVN PA TV+    + ++ ++ R    G  + +QM GRAGR   D  G
Sbjct: 799 IQVLFSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWTELGALDIMQMLGRAGRPQYDDRG 858

Query: 280 TVIMM 294
             I++
Sbjct: 859 EGILI 863

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>HELS_PYRKO (Q5JGV6) Putative ski2-type helicase (EC 3.6.1.-) [Contains:|
           Endonuclease PI-PkoHel (EC 3.1.-.-) (Pko Hel intein)]
          Length = 1125

 Score = 33.9 bits (76), Expect = 0.42
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +3

Query: 30  GIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTEXIC 137
           G+  HHAGL    + ++E  F  G+IKV+ +T  +C
Sbjct: 297 GVAFHHAGLSRAERTLIEDAFRNGLIKVITATPTLC 332

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>MS116_YEAST (P15424) ATP-dependent RNA helicase MSS116, mitochondrial precursor|
           (EC 3.6.1.-)
          Length = 664

 Score = 33.1 bits (74), Expect = 0.72
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = +1

Query: 229 YIQMAGRAGRRGLDTIGTVIMMCRDEIP---EESDLKNLLVGKPTRLE 363
           YI   GR  R G +   +V+ +C+DE+P   E  D KN+++ K  + E
Sbjct: 460 YIHRIGRTARSGKEG-SSVLFICKDELPFVRELEDAKNIVIAKQEKYE 506

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>Y255_RICPR (Q9ZDS0) Hypothetical protein RP255|
          Length = 381

 Score = 32.7 bits (73), Expect = 0.94
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -1

Query: 221 GSNLRCSFPSNFLKVSNTTVLAGALTPIANVLGGKQYLNHTATKQHLNYFF 69
           G NL     + F+K +N T++  AL    N+L    + NHT+ K +LN  F
Sbjct: 142 GGNLMVDLLNPFIKPTNNTIVICALLYCINILTEFLHYNHTSHKLNLNSKF 192

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>SUV3_YEAST (P32580) ATP-dependent RNA helicase SUV3, mitochondrial precursor|
           (EC 3.6.1.-)
          Length = 737

 Score = 32.7 bits (73), Expect = 0.94
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +1

Query: 139 MGVNAPARTVVFDTLRKFDGKEHRRLLPGEYIQMAGRAGR 258
           MG+N     VVF T  K++G+E   +   +  Q+ GRAGR
Sbjct: 462 MGLNLSIDRVVFTTNMKYNGEELMEMTSSQIKQIGGRAGR 501

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>SUV3_SACDO (O74727) ATP-dependent RNA helicase SUV3, mitochondrial precursor|
           (EC 3.6.1.-)
          Length = 737

 Score = 32.7 bits (73), Expect = 0.94
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +1

Query: 139 MGVNAPARTVVFDTLRKFDGKEHRRLLPGEYIQMAGRAGR 258
           MG+N     VVF T  K++G+E   +   +  Q+ GRAGR
Sbjct: 462 MGLNLSIDRVVFTTNMKYNGEELMEMTSSQIKQIGGRAGR 501

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>PGRC2_HUMAN (O15173) Membrane-associated progesterone receptor component 2|
           (Progesterone membrane-binding protein) (Steroid
           receptor protein DG6)
          Length = 223

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 29/105 (27%), Positives = 40/105 (38%), Gaps = 19/105 (18%)
 Frame = +1

Query: 160 RTVVFDTLRKFDGKEHRRLL-------------------PGEYIQMAGRAGRRGLDTIGT 282
           R    + LR++DG  + R+L                    G Y   AGR   RGL T   
Sbjct: 101 RDFSLEQLRQYDGSRNPRILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCL 160

Query: 283 VIMMCRDEIPEESDLKNLLVGKPTRLESQFRLTYTMILHLLRVEE 417
                RDE  + SDL  + +      E QF+  Y  +  LL+  E
Sbjct: 161 DKDALRDEYDDLSDLNAVQMESVREWEMQFKEKYDYVGRLLKPGE 205

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>PGRC2_MOUSE (Q80UU9) Membrane associated progesterone receptor component 2|
           (Fragment)
          Length = 214

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 29/105 (27%), Positives = 39/105 (37%), Gaps = 19/105 (18%)
 Frame = +1

Query: 160 RTVVFDTLRKFDGKEHRRLL-------------------PGEYIQMAGRAGRRGLDTIGT 282
           R    + LR++DG    R+L                    G Y   AGR   RGL T   
Sbjct: 92  RDFSLEQLRQYDGARTPRILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCL 151

Query: 283 VIMMCRDEIPEESDLKNLLVGKPTRLESQFRLTYTMILHLLRVEE 417
                RDE  + SDL  + +      E QF+  Y  +  LL+  E
Sbjct: 152 DKDALRDEYDDLSDLNAVQMESVREWEMQFKEKYDYVGRLLKPGE 196

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>PGRC2_RAT (Q5XIU9) Membrane associated progesterone receptor component 2|
          Length = 217

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 29/105 (27%), Positives = 39/105 (37%), Gaps = 19/105 (18%)
 Frame = +1

Query: 160 RTVVFDTLRKFDGKEHRRLL-------------------PGEYIQMAGRAGRRGLDTIGT 282
           R    + LR++DG    R+L                    G Y   AGR   RGL T   
Sbjct: 95  RDFSLEQLRQYDGARTPRILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCL 154

Query: 283 VIMMCRDEIPEESDLKNLLVGKPTRLESQFRLTYTMILHLLRVEE 417
                RDE  + SDL  + +      E QF+  Y  +  LL+  E
Sbjct: 155 DKDALRDEYDDLSDLNAVQMESVREWEMQFKEKYDYVGRLLKPGE 199

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>PHF10_BRARE (Q6NWE1) PHD finger protein 10|
          Length = 408

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 18/40 (45%), Positives = 24/40 (60%)
 Frame = +1

Query: 439 KRSFAEFHAQKDLPEKEKLLLQMLRQPTKTIETRCTVGLT 558
           KR + E   ++DL  KEKL L   R+     ET+CT+GLT
Sbjct: 16  KRKYPEME-RRDLSHKEKLYL---REQNVITETQCTLGLT 51

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>CATA_BACST (P14412) Peroxidase/catalase (EC 1.11.1.6) (Catalase-peroxidase)|
          Length = 735

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 33/116 (28%), Positives = 52/116 (44%)
 Frame = +1

Query: 139 MGVNAPARTVVFDTLRKFDGKEHRRLLPGEYIQMAGRAGRRGLDTIGTVIMMCRDEIPEE 318
           +G+ AP  TV+   LR   G  +R L  G +     R G    D    ++ M  + +P +
Sbjct: 604 LGLTAPEMTVLVGGLRVL-GANYRDLPHGVFTD---RIGVLTNDFFVNLLDMNYEWVPTD 659

Query: 319 SDLKNLLVGKPTRLESQFRLTYTMILHLLRVEELKVEDMLKRSFAEFHAQKDLPEK 486
           S +  +      R   + R T T      RV+ +   + + RS+AEF+AQ D  EK
Sbjct: 660 SGIYEIR----DRKTGEVRWTAT------RVDLIFGSNSILRSYAEFYAQDDNQEK 705

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>PGRC1_HUMAN (O00264) Membrane-associated progesterone receptor component 1|
           (mPR)
          Length = 194

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 30/85 (35%), Positives = 35/85 (41%), Gaps = 2/85 (2%)
 Frame = +1

Query: 169 VFDTL--RKFDGKEHRRLLPGEYIQMAGRAGRRGLDTIGTVIMMCRDEIPEESDLKNLLV 342
           VFD    RKF G E      G Y   AGR   RGL T        +DE  + SDL     
Sbjct: 96  VFDVTKGRKFYGPE------GPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTAAQQ 149

Query: 343 GKPTRLESQFRLTYTMILHLLRVEE 417
              +  ESQF   Y  +  LL+  E
Sbjct: 150 ETLSDWESQFTFKYHHVGKLLKEGE 174

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>PHF10_MOUSE (Q9D8M7) PHD finger protein 10|
          Length = 410

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 18/40 (45%), Positives = 25/40 (62%)
 Frame = +1

Query: 439 KRSFAEFHAQKDLPEKEKLLLQMLRQPTKTIETRCTVGLT 558
           KR + +   ++DL  KEKL L+ L   T   ET+CT+GLT
Sbjct: 16  KRKYPDLE-RRDLSHKEKLYLRELNVIT---ETQCTLGLT 51

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>PHF10_HUMAN (Q8WUB8) PHD finger protein 10 (XAP135)|
          Length = 410

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 18/40 (45%), Positives = 25/40 (62%)
 Frame = +1

Query: 439 KRSFAEFHAQKDLPEKEKLLLQMLRQPTKTIETRCTVGLT 558
           KR + +   ++DL  KEKL L+ L   T   ET+CT+GLT
Sbjct: 16  KRKYPDLE-RRDLSHKEKLYLRELNVIT---ETQCTLGLT 51

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>MYLIP_HUMAN (Q8WY64) Ubiquitin ligase MYLIP (EC 6.3.2.-) (Myosin regulatory|
           light chain-interacting protein) (MIR)
          Length = 445

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -3

Query: 549 NCTSSLDCLCRLT*HLQKQLFLLRQILLCMEFCETSL 439
           NC+S     C+ T  LQ++L  L++ +LCM  CE  +
Sbjct: 359 NCSSCEGLSCQQTRVLQEKLRKLKEAMLCMVCCEEEI 395

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>PHF10_XENLA (Q63ZP1) PHD finger protein 10|
          Length = 417

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 18/40 (45%), Positives = 25/40 (62%)
 Frame = +1

Query: 439 KRSFAEFHAQKDLPEKEKLLLQMLRQPTKTIETRCTVGLT 558
           KR + +   ++DL  KEKL L+ L   T   ET+CT+GLT
Sbjct: 16  KRKYPDLE-RRDLSHKEKLYLRELNVIT---ETQCTLGLT 51

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>SLU7_CANGA (Q6FRY5) Pre-mRNA-splicing factor SLU7|
          Length = 318

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 24/99 (24%), Positives = 46/99 (46%)
 Frame = +1

Query: 298 RDEIPEESDLKNLLVGKPTRLESQFRLTYTMILHLLRVEELKVEDMLKRSFAEFHAQKDL 477
           RDE+ +   + ++LV  PT+LE        ++     ++ LK+ +   R       Q+ L
Sbjct: 240 RDELVDADKVNHVLVANPTKLE--------VLRKQKELDSLKLTEEQNR-----QEQRKL 286

Query: 478 PEKEKLLLQMLRQPTKTIETRCTVGLTQGTEAVLCEIFG 594
             K KLL +  ++P  T +       +  T+A L +++G
Sbjct: 287 KRKAKLLKKKAKKPKGTPQ-------SDSTKAQLMDMYG 318

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>DNJA3_MOUSE (Q99M87) DnaJ homolog subfamily A member 3, mitochondrial precursor|
           (Tumorous imaginal discs protein Tid56 homolog) (DnaJ
           protein Tid-1) (mTid-1)
          Length = 480

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = +1

Query: 136 AMGVNAPARTVVFDTLRKFDGKEHRRLLPGEYIQMAGRAGRRGLDTIGT 282
           A GVN      + DT  + DGK +    PG  +Q     G  G++TI T
Sbjct: 221 AKGVNKEFTVNIMDTCERCDGKGNE---PGTKVQHCHYCGGSGMETINT 266

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>PDR7_ORYSA (Q8GU88) Putative pleiotropic drug resistance protein 7|
          Length = 1444

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +1

Query: 382  YTMILHLLRVEELKVEDMLKRSFAEFHAQKDLPEKEKLLLQMLRQP 519
            Y     +L V  L  ED+L  +FAE +   DL ++ K L+  L  P
Sbjct: 1107 YNPATWMLEVTTLAQEDILGINFAEVYRNSDLYQRNKTLISELSTP 1152


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,457,187
Number of Sequences: 219361
Number of extensions: 1643498
Number of successful extensions: 4460
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 4302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4437
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5995743495
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result