Clone Name | bags9k22 |
---|---|
Clone Library Name | barley_pub |
>dbj|AB118018.1| Oryza sativa (japonica cultivar-group) bip132 mRNA for BRI1-KD interacting protein 132, partial cds Length = 1131 Score = 214 bits (108), Expect = 3e-52 Identities = 213/248 (85%) Strand = Plus / Plus Query: 268 tgcattccaacgggtgaagagtgaagatattaaatttgctgatgaaagactacaagataa 327 |||||| ||||||||||| || ||| |||||||||||||||| || || || ||||| Sbjct: 622 tgcatttcaacgggtgaaactagaggatgttaaatttgctgatgataggcttcaggataa 681 Query: 328 ttcgtattgggctaagggtggtgctgactctgggtacggtgcgaaggcacaggagattct 387 || |||||||||||||||||||| ||||||||||| ||||| |||||||| ||| |||| Sbjct: 682 ctcatattgggctaagggtggtgcagactctgggtatggtgcaaaggcacaagaggttct 741 Query: 388 tggacaagttagaggaagggattttaggcacgagaagaccaagaagaagcgcggaaccta 447 ||| |||||||||||||||| ||||| || |||||||||||||||||||| |||||||| Sbjct: 742 tgggcaagttagaggaaggggctttagacatgagaagaccaagaagaagcgtggaaccta 801 Query: 448 caagggtgggttcattgatctacaaacccactcgattaagtttaacaattcagacgacga 507 || ||||||| || ||| ||||||||||||| || ||||| ||| ||||||| ||||| Sbjct: 802 caggggtgggcagatcgatttacaaacccactcaatcaagttcaacgattcagatgacga 861 Query: 508 gtgatcgc 515 |||||||| Sbjct: 862 gtgatcgc 869 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 112 tgatgatgcagttgttagcaagaagaggaaactggaagaagttgaaggaagcaaaccccc 171 |||| |||| || ||| |||| ||| ||||||| |||||||| ||||||||||| | ||| Sbjct: 451 tgataatgcggtagttggcaaaaagcggaaactagaagaagtcgaaggaagcaacctccc 510 Query: 172 tgccaaagaagata 185 ||| |||||||||| Sbjct: 511 tgctaaagaagata 524
>dbj|AK101273.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033A11, full insert sequence Length = 1604 Score = 214 bits (108), Expect = 3e-52 Identities = 213/248 (85%) Strand = Plus / Plus Query: 268 tgcattccaacgggtgaagagtgaagatattaaatttgctgatgaaagactacaagataa 327 |||||| ||||||||||| || ||| |||||||||||||||| || || || ||||| Sbjct: 1114 tgcatttcaacgggtgaaactagaggatgttaaatttgctgatgataggcttcaggataa 1173 Query: 328 ttcgtattgggctaagggtggtgctgactctgggtacggtgcgaaggcacaggagattct 387 || |||||||||||||||||||| ||||||||||| ||||| |||||||| ||| |||| Sbjct: 1174 ctcatattgggctaagggtggtgcagactctgggtatggtgcaaaggcacaagaggttct 1233 Query: 388 tggacaagttagaggaagggattttaggcacgagaagaccaagaagaagcgcggaaccta 447 ||| |||||||||||||||| ||||| || |||||||||||||||||||| |||||||| Sbjct: 1234 tgggcaagttagaggaaggggctttagacatgagaagaccaagaagaagcgtggaaccta 1293 Query: 448 caagggtgggttcattgatctacaaacccactcgattaagtttaacaattcagacgacga 507 || ||||||| || ||| ||||||||||||| || ||||| ||| ||||||| ||||| Sbjct: 1294 caggggtgggcagatcgatttacaaacccactcaatcaagttcaacgattcagatgacga 1353 Query: 508 gtgatcgc 515 |||||||| Sbjct: 1354 gtgatcgc 1361 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 112 tgatgatgcagttgttagcaagaagaggaaactggaagaagttgaaggaagcaaaccccc 171 |||| |||| || ||| |||| ||| ||||||| |||||||| ||||||||||| | ||| Sbjct: 943 tgataatgcggtagttggcaaaaagcggaaactagaagaagtcgaaggaagcaacctccc 1002 Query: 172 tgccaaagaagatatcactgcca 194 ||| |||||||||| ||| |||| Sbjct: 1003 tgctaaagaagataacacagcca 1025
>gb|AY111278.1| Zea mays CL31341_-1 mRNA sequence Length = 625 Score = 127 bits (64), Expect = 5e-26 Identities = 173/211 (81%) Strand = Plus / Minus Query: 301 atttgctgatgaaagactacaagataattcgtattgggctaagggtggtgctgactctgg 360 |||||| ||||| || || || ||||| |||||||||||||||||||| || ||| | || Sbjct: 455 atttgcagatgacaggcttcaggataactcgtattgggctaagggtggcgcagacaccgg 396 Query: 361 gtacggtgcgaaggcacaggagattcttggacaagttagaggaagggattttaggcacga 420 ||||| || |||||||||||||| ||||| ||||| | |||| ||||||||||| Sbjct: 395 ttacggcgcaaaggcacaggagatccttggccaagtcaagggaannnnntttaggcacga 336 Query: 421 gaagaccaagaagaagcgcggaacctacaagggtgggttcattgatctacaaacccactc 480 ||| |||||||||||||| || ||||||| ||| ||| || || || ||||||||||| Sbjct: 335 gaaaaccaagaagaagcgtggcacctacaggggcgggcaaatcgacctgcaaacccactc 276 Query: 481 gattaagtttaacaattcagacgacgagtga 511 ||| ||||| | |||||||||||||||||| Sbjct: 275 gatcaagttcgagaattcagacgacgagtga 245
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 99.6 bits (50), Expect = 1e-17 Identities = 92/106 (86%) Strand = Plus / Plus Query: 410 tttaggcacgagaagaccaagaagaagcgcggaacctacaagggtgggttcattgatcta 469 ||||| || |||||||||||||||||||| |||||||||| ||||||| || ||| || Sbjct: 26026364 tttagacatgagaagaccaagaagaagcgtggaacctacaggggtgggcagatcgattta 26026423 Query: 470 caaacccactcgattaagtttaacaattcagacgacgagtgatcgc 515 ||||||||||| || ||||| ||| ||||||| ||||||||||||| Sbjct: 26026424 caaacccactcaatcaagttcaacgattcagatgacgagtgatcgc 26026469 Score = 81.8 bits (41), Expect = 3e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 342 agggtggtgctgactctgggtacggtgcgaaggcacaggagattcttggacaagttagag 401 |||||||||| ||||||||||| ||||| |||||||| ||| ||||||| |||||||||| Sbjct: 26026172 agggtggtgcagactctgggtatggtgcaaaggcacaagaggttcttgggcaagttagag 26026231 Query: 402 gaagg 406 ||||| Sbjct: 26026232 gaagg 26026236 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 112 tgatgatgcagttgttagcaagaagaggaaactggaagaagttgaaggaagcaaaccccc 171 |||| |||| || ||| |||| ||| ||||||| |||||||| ||||||||||| | ||| Sbjct: 26024879 tgataatgcggtagttggcaaaaagcggaaactagaagaagtcgaaggaagcaacctccc 26024938 Query: 172 tgccaaagaagata 185 ||| |||||||||| Sbjct: 26024939 tgctaaagaagata 26024952 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Plus Query: 268 tgcattccaacgggtgaagagtgaagatattaaatttgctgatgaaagactacaagataa 327 |||||| ||||||||||| || ||| |||||||||||||||| || || || ||||| Sbjct: 26025520 tgcatttcaacgggtgaaactagaggatgttaaatttgctgatgataggcttcaggataa 26025579 Query: 328 ttcgtattgggctaagg 344 || ||||||||||||| Sbjct: 26025580 ctcatattgggctaagg 26025596
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 99.6 bits (50), Expect = 1e-17 Identities = 92/106 (86%) Strand = Plus / Plus Query: 410 tttaggcacgagaagaccaagaagaagcgcggaacctacaagggtgggttcattgatcta 469 ||||| || |||||||||||||||||||| |||||||||| ||||||| || ||| || Sbjct: 25954540 tttagacatgagaagaccaagaagaagcgtggaacctacaggggtgggcagatcgattta 25954599 Query: 470 caaacccactcgattaagtttaacaattcagacgacgagtgatcgc 515 ||||||||||| || ||||| ||| ||||||| ||||||||||||| Sbjct: 25954600 caaacccactcaatcaagttcaacgattcagatgacgagtgatcgc 25954645 Score = 81.8 bits (41), Expect = 3e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 342 agggtggtgctgactctgggtacggtgcgaaggcacaggagattcttggacaagttagag 401 |||||||||| ||||||||||| ||||| |||||||| ||| ||||||| |||||||||| Sbjct: 25954348 agggtggtgcagactctgggtatggtgcaaaggcacaagaggttcttgggcaagttagag 25954407 Query: 402 gaagg 406 ||||| Sbjct: 25954408 gaagg 25954412 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 112 tgatgatgcagttgttagcaagaagaggaaactggaagaagttgaaggaagcaaaccccc 171 |||| |||| || ||| |||| ||| ||||||| |||||||| ||||||||||| | ||| Sbjct: 25953055 tgataatgcggtagttggcaaaaagcggaaactagaagaagtcgaaggaagcaacctccc 25953114 Query: 172 tgccaaagaagata 185 ||| |||||||||| Sbjct: 25953115 tgctaaagaagata 25953128 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Plus Query: 268 tgcattccaacgggtgaagagtgaagatattaaatttgctgatgaaagactacaagataa 327 |||||| ||||||||||| || ||| |||||||||||||||| || || || ||||| Sbjct: 25953696 tgcatttcaacgggtgaaactagaggatgttaaatttgctgatgataggcttcaggataa 25953755 Query: 328 ttcgtattgggctaagg 344 || ||||||||||||| Sbjct: 25953756 ctcatattgggctaagg 25953772
>emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC OJ1327_A12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 161806 Score = 99.6 bits (50), Expect = 1e-17 Identities = 92/106 (86%) Strand = Plus / Minus Query: 410 tttaggcacgagaagaccaagaagaagcgcggaacctacaagggtgggttcattgatcta 469 ||||| || |||||||||||||||||||| |||||||||| ||||||| || ||| || Sbjct: 85307 tttagacatgagaagaccaagaagaagcgtggaacctacaggggtgggcagatcgattta 85248 Query: 470 caaacccactcgattaagtttaacaattcagacgacgagtgatcgc 515 ||||||||||| || ||||| ||| ||||||| ||||||||||||| Sbjct: 85247 caaacccactcaatcaagttcaacgattcagatgacgagtgatcgc 85202 Score = 81.8 bits (41), Expect = 3e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 342 agggtggtgctgactctgggtacggtgcgaaggcacaggagattcttggacaagttagag 401 |||||||||| ||||||||||| ||||| |||||||| ||| ||||||| |||||||||| Sbjct: 85499 agggtggtgcagactctgggtatggtgcaaaggcacaagaggttcttgggcaagttagag 85440 Query: 402 gaagg 406 ||||| Sbjct: 85439 gaagg 85435 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 112 tgatgatgcagttgttagcaagaagaggaaactggaagaagttgaaggaagcaaaccccc 171 |||| |||| || ||| |||| ||| ||||||| |||||||| ||||||||||| | ||| Sbjct: 86792 tgataatgcggtagttggcaaaaagcggaaactagaagaagtcgaaggaagcaacctccc 86733 Query: 172 tgccaaagaagata 185 ||| |||||||||| Sbjct: 86732 tgctaaagaagata 86719 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Minus Query: 268 tgcattccaacgggtgaagagtgaagatattaaatttgctgatgaaagactacaagataa 327 |||||| ||||||||||| || ||| |||||||||||||||| || || || ||||| Sbjct: 86151 tgcatttcaacgggtgaaactagaggatgttaaatttgctgatgataggcttcaggataa 86092 Query: 328 ttcgtattgggctaagg 344 || ||||||||||||| Sbjct: 86091 ctcatattgggctaagg 86075
>gb|AC174357.6| Medicago truncatula clone mth2-26c10, complete sequence Length = 98743 Score = 56.0 bits (28), Expect = 1e-04 Identities = 88/108 (81%) Strand = Plus / Minus Query: 404 agggattttaggcacgagaagaccaagaagaagcgcggaacctacaagggtgggttcatt 463 ||||||||| | ||||| |||||||||||||| || || ||||| | |||||| | ||| Sbjct: 95285 agggattttcgccacgaaaagaccaagaagaaacgtgggacctataggggtggacttatt 95226 Query: 464 gatctacaaacccactcgattaagtttaacaattcagacgacgagtga 511 ||| |||| ||||||| |||||||||| ||||||| || |||||| Sbjct: 95225 gatttacattcccactcagttaagtttaattattcagatgaggagtga 95178
>gb|AC126781.22| Medicago truncatula clone mth2-12m15, complete sequence Length = 116119 Score = 56.0 bits (28), Expect = 1e-04 Identities = 88/108 (81%) Strand = Plus / Plus Query: 404 agggattttaggcacgagaagaccaagaagaagcgcggaacctacaagggtgggttcatt 463 ||||||||| | ||||| |||||||||||||| || || ||||| | |||||| | ||| Sbjct: 105776 agggattttcgccacgaaaagaccaagaagaaacgtgggacctataggggtggacttatt 105835 Query: 464 gatctacaaacccactcgattaagtttaacaattcagacgacgagtga 511 ||| |||| ||||||| |||||||||| ||||||| || |||||| Sbjct: 105836 gatttacattcccactcagttaagtttaattattcagatgaggagtga 105883
>gb|AC010068.8| Drosophila melanogaster 3L BAC RP98-15K24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 178607 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 416 cacgagaagaccaagaagaagcgcgg 441 |||||||||||||||||||||||||| Sbjct: 50304 cacgagaagaccaagaagaagcgcgg 50329
>ref|NM_168941.2| Drosophila melanogaster Nopp140 CG7421-RA, transcript variant A (Nopp140), mRNA Length = 3104 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 416 cacgagaagaccaagaagaagcgcgg 441 |||||||||||||||||||||||||| Sbjct: 2472 cacgagaagaccaagaagaagcgcgg 2497
>ref|NM_168940.1| Drosophila melanogaster Nopp140 CG7421-RB, transcript variant B (Nopp140), mRNA Length = 2747 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 416 cacgagaagaccaagaagaagcgcgg 441 |||||||||||||||||||||||||| Sbjct: 2115 cacgagaagaccaagaagaagcgcgg 2140
>gb|AY061181.1| Drosophila melanogaster LD14807 full length cDNA Length = 1585 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 416 cacgagaagaccaagaagaagcgcgg 441 |||||||||||||||||||||||||| Sbjct: 936 cacgagaagaccaagaagaagcgcgg 961
>gb|BT021407.1| Drosophila melanogaster LD06749 full insert cDNA Length = 3072 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 416 cacgagaagaccaagaagaagcgcgg 441 |||||||||||||||||||||||||| Sbjct: 2432 cacgagaagaccaagaagaagcgcgg 2457
>gb|AE003595.3| Drosophila melanogaster chromosome 3L, section 76 of 83 of the complete sequence Length = 294272 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 416 cacgagaagaccaagaagaagcgcgg 441 |||||||||||||||||||||||||| Sbjct: 255564 cacgagaagaccaagaagaagcgcgg 255589
>gb|AF162774.2| Drosophila melanogaster Nopp140-like nucleolar protein (Nopp140) mRNA, complete cds Length = 3028 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 416 cacgagaagaccaagaagaagcgcgg 441 |||||||||||||||||||||||||| Sbjct: 2374 cacgagaagaccaagaagaagcgcgg 2399
>ref|NM_125094.2| Arabidopsis thaliana unknown protein AT5G57120 mRNA, complete cds Length = 1333 Score = 44.1 bits (22), Expect = 0.55 Identities = 49/58 (84%) Strand = Plus / Plus Query: 392 caagttagaggaagggattttaggcacgagaagaccaagaagaagcgcggaacctaca 449 ||||| |||||||||||||| | || |||||||| |||||||| || |||| ||||| Sbjct: 984 caagtgagaggaagggatttccgacatgagaagacgaagaagaaacgaggaagctaca 1041
>gb|CP000114.1| Streptococcus agalactiae A909, complete genome Length = 2127839 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 292 agatattaaatttgctgatgaaagac 317 |||||||||||||| ||||||||||| Sbjct: 500908 agatattaaatttgatgatgaaagac 500933
>emb|AJ248286.2|CNSPAX04 Pyrococcus abyssi complete genome; segment 4/6 Length = 287130 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 88 aggagaggatggaaaggcttca 109 |||||||||||||||||||||| Sbjct: 87755 aggagaggatggaaaggcttca 87734
>gb|AE014212.1| Streptococcus agalactiae 2603V/R section 22 of 100 of the complete genome Length = 20965 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 292 agatattaaatttgctgatgaaagac 317 |||||||||||||| ||||||||||| Sbjct: 18943 agatattaaatttgatgatgaaagac 18968
>emb|AL766845.1|SAG766845 Streptococcus agalactiae NEM316 complete genome, segment 3 Length = 178050 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 292 agatattaaatttgctgatgaaagac 317 |||||||||||||| ||||||||||| Sbjct: 143435 agatattaaatttgatgatgaaagac 143460
>gb|AY127952.1| Arabidopsis thaliana AT5g57120/MUL3_6 mRNA, complete cds Length = 993 Score = 44.1 bits (22), Expect = 0.55 Identities = 49/58 (84%) Strand = Plus / Plus Query: 392 caagttagaggaagggattttaggcacgagaagaccaagaagaagcgcggaacctaca 449 ||||| |||||||||||||| | || |||||||| |||||||| || |||| ||||| Sbjct: 871 caagtgagaggaagggatttccgacatgagaagacgaagaagaaacgaggaagctaca 928
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 294 atattaaatttgctgatgaaagacta 319 |||||||| ||||||||||||||||| Sbjct: 10217384 atattaaacttgctgatgaaagacta 10217359
>gb|DP000055.1| Pan troglodytes chromosome Y chry_random_1 genomic scaffold Length = 276070 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 294 atattaaatttgctgatgaaagacta 319 |||||||| ||||||||||||||||| Sbjct: 131393 atattaaacttgctgatgaaagacta 131368
>gb|AC164571.3| Pan troglodytes BAC clone CH251-967O8 from chromosome y, complete sequence Length = 225200 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 294 atattaaatttgctgatgaaagacta 319 |||||||| ||||||||||||||||| Sbjct: 210449 atattaaacttgctgatgaaagacta 210424
>gb|AY056089.1| Arabidopsis thaliana AT5g57120/MUL3_6 mRNA, complete cds Length = 549 Score = 44.1 bits (22), Expect = 0.55 Identities = 49/58 (84%) Strand = Plus / Plus Query: 392 caagttagaggaagggattttaggcacgagaagaccaagaagaagcgcggaacctaca 449 ||||| |||||||||||||| | || |||||||| |||||||| || |||| ||||| Sbjct: 427 caagtgagaggaagggatttccgacatgagaagacgaagaagaaacgaggaagctaca 484
>gb|AY045686.1| Arabidopsis thaliana AT5g57120/MUL3_6 mRNA, complete cds Length = 1258 Score = 44.1 bits (22), Expect = 0.55 Identities = 49/58 (84%) Strand = Plus / Plus Query: 392 caagttagaggaagggattttaggcacgagaagaccaagaagaagcgcggaacctaca 449 ||||| |||||||||||||| | || |||||||| |||||||| || |||| ||||| Sbjct: 980 caagtgagaggaagggatttccgacatgagaagacgaagaagaaacgaggaagctaca 1037
>gb|AY037212.1| Arabidopsis thaliana AT5g57120/MUL3_6 mRNA, complete cds Length = 1279 Score = 44.1 bits (22), Expect = 0.55 Identities = 49/58 (84%) Strand = Plus / Plus Query: 392 caagttagaggaagggattttaggcacgagaagaccaagaagaagcgcggaacctaca 449 ||||| |||||||||||||| | || |||||||| |||||||| || |||| ||||| Sbjct: 979 caagtgagaggaagggatttccgacatgagaagacgaagaagaaacgaggaagctaca 1036
>gb|AC175060.2| Pan troglodytes BAC clone CH251-724O9 from chromosome y, complete sequence Length = 196548 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 294 atattaaatttgctgatgaaagacta 319 |||||||| ||||||||||||||||| Sbjct: 51865 atattaaacttgctgatgaaagacta 51840
>gb|AC172373.3| Pan troglodytes BAC clone CH251-1081D19 from chromosome y, complete sequence Length = 194913 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 294 atattaaatttgctgatgaaagacta 319 |||||||| ||||||||||||||||| Sbjct: 168621 atattaaacttgctgatgaaagacta 168646
>gb|AY084589.1| Arabidopsis thaliana clone 11265 mRNA, complete sequence Length = 1258 Score = 44.1 bits (22), Expect = 0.55 Identities = 49/58 (84%) Strand = Plus / Plus Query: 392 caagttagaggaagggattttaggcacgagaagaccaagaagaagcgcggaacctaca 449 ||||| |||||||||||||| | || |||||||| |||||||| || |||| ||||| Sbjct: 984 caagtgagaggaagggatttccgacatgagaagacgaagaagaaacgaggaagctaca 1041
>gb|AC163766.3| Pan troglodytes BAC clone CH251-115P4 from chromosome y, complete sequence Length = 185225 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 294 atattaaatttgctgatgaaagacta 319 |||||||| ||||||||||||||||| Sbjct: 13833 atattaaagttgctgatgaaagacta 13858
>gb|AC163728.4| Pan troglodytes BAC clone CH251-589C1 from chromosome y, complete sequence Length = 206451 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 294 atattaaatttgctgatgaaagacta 319 |||||||| ||||||||||||||||| Sbjct: 66776 atattaaacttgctgatgaaagacta 66751
>gb|AC163716.3| Pan troglodytes BAC clone CH251-828J24 from chromosome y, complete sequence Length = 165274 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 294 atattaaatttgctgatgaaagacta 319 |||||||| ||||||||||||||||| Sbjct: 99800 atattaaacttgctgatgaaagacta 99825
>gb|AC163727.3| Pan troglodytes BAC clone CH251-1132L6 from chromosome y, complete sequence Length = 191546 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 294 atattaaatttgctgatgaaagacta 319 |||||||| ||||||||||||||||| Sbjct: 131379 atattaaacttgctgatgaaagacta 131354
>dbj|AP006140.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT37A01, TM0244, complete sequence Length = 102724 Score = 44.1 bits (22), Expect = 0.55 Identities = 37/42 (88%) Strand = Plus / Plus Query: 365 ggtgcgaaggcacaggagattcttggacaagttagaggaagg 406 ||||| || ||||| || |||||||| ||||||||||||||| Sbjct: 88819 ggtgcaaaagcacaagaaattcttggccaagttagaggaagg 88860 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 461 attgatctacaaacccactcgattaagtttaa 492 |||||||||||| ||||||| || |||||||| Sbjct: 89268 attgatctacaatcccactcaataaagtttaa 89299
>gb|AC168073.4| Mus musculus BAC clone RP23-60N8 from chromosome 7, complete sequence Length = 238764 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 580 gaaagggaagaagtgaaggca 600 ||||||||||||||||||||| Sbjct: 161218 gaaagggaagaagtgaaggca 161238
>gb|AC115724.10| Mus musculus chromosome 3, clone RP23-20L18, complete sequence Length = 208154 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 135 agaggaaactggaagaagttgaagg 159 ||||||||| ||||||||||||||| Sbjct: 143308 agaggaaacaggaagaagttgaagg 143284
>ref|XM_878024.1| PREDICTED: Bos taurus myosin, heavy polypeptide 8, skeletal muscle, perinatal, transcript variant 19 (MYH8), mRNA Length = 5948 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2835 caagaagaggaaactggaaga 2855
>ref|XM_877978.1| PREDICTED: Bos taurus myosin, heavy polypeptide 8, skeletal muscle, perinatal, transcript variant 18 (MYH8), mRNA Length = 6032 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2919 caagaagaggaaactggaaga 2939
>ref|XM_877939.1| PREDICTED: Bos taurus myosin, heavy polypeptide 8, skeletal muscle, perinatal, transcript variant 17 (MYH8), mRNA Length = 5990 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2877 caagaagaggaaactggaaga 2897
>ref|XM_877896.1| PREDICTED: Bos taurus myosin, heavy polypeptide 8, skeletal muscle, perinatal, transcript variant 16 (MYH8), mRNA Length = 5858 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2745 caagaagaggaaactggaaga 2765
>ref|XM_877852.1| PREDICTED: Bos taurus myosin, heavy polypeptide 8, skeletal muscle, perinatal, transcript variant 15 (MYH8), mRNA Length = 5972 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2859 caagaagaggaaactggaaga 2879
>ref|XM_877815.1| PREDICTED: Bos taurus myosin, heavy polypeptide 8, skeletal muscle, perinatal, transcript variant 14 (MYH8), mRNA Length = 5984 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2871 caagaagaggaaactggaaga 2891
>ref|XM_877771.1| PREDICTED: Bos taurus myosin, heavy polypeptide 8, skeletal muscle, perinatal, transcript variant 13 (MYH8), mRNA Length = 5996 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2883 caagaagaggaaactggaaga 2903
>ref|XM_877729.1| PREDICTED: Bos taurus myosin, heavy polypeptide 8, skeletal muscle, perinatal, transcript variant 12 (MYH8), mRNA Length = 5900 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2877 caagaagaggaaactggaaga 2897
>ref|XM_877685.1| PREDICTED: Bos taurus myosin, heavy polypeptide 8, skeletal muscle, perinatal, transcript variant 11 (MYH8), mRNA Length = 5903 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2877 caagaagaggaaactggaaga 2897
>ref|XM_877640.1| PREDICTED: Bos taurus myosin, heavy polypeptide 8, skeletal muscle, perinatal, transcript variant 10 (MYH8), mRNA Length = 5891 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2877 caagaagaggaaactggaaga 2897
>ref|XM_877595.1| PREDICTED: Bos taurus myosin, heavy polypeptide 8, skeletal muscle, perinatal, transcript variant 9 (MYH8), mRNA Length = 5681 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2877 caagaagaggaaactggaaga 2897
>ref|XM_877546.1| PREDICTED: Bos taurus myosin, heavy polypeptide 8, skeletal muscle, perinatal, transcript variant 8 (MYH8), mRNA Length = 4301 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 1188 caagaagaggaaactggaaga 1208
>ref|XM_877500.1| PREDICTED: Bos taurus myosin, heavy polypeptide 8, skeletal muscle, perinatal, transcript variant 7 (MYH8), mRNA Length = 5201 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2877 caagaagaggaaactggaaga 2897
>ref|XM_877451.1| PREDICTED: Bos taurus myosin, heavy polypeptide 8, skeletal muscle, perinatal, transcript variant 6 (MYH8), mRNA Length = 5105 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2877 caagaagaggaaactggaaga 2897
>ref|XM_877396.1| PREDICTED: Bos taurus myosin, heavy polypeptide 8, skeletal muscle, perinatal, transcript variant 5 (MYH8), mRNA Length = 5741 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2712 caagaagaggaaactggaaga 2732
>ref|XM_877354.1| PREDICTED: Bos taurus myosin, heavy polypeptide 8, skeletal muscle, perinatal, transcript variant 4 (MYH8), mRNA Length = 5840 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2886 caagaagaggaaactggaaga 2906
>ref|XM_865879.1| PREDICTED: Bos taurus myosin, heavy polypeptide 8, skeletal muscle, perinatal, transcript variant 2 (MYH8), mRNA Length = 5996 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2883 caagaagaggaaactggaaga 2903
>gb|AC148455.2| Xenopus tropicalis clone CH216-165I8, complete sequence Length = 170350 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 108 cagctgatgatgcagttgttagcaa 132 ||||||||| ||||||||||||||| Sbjct: 144189 cagctgatgctgcagttgttagcaa 144165
>ref|XM_858075.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 2 (Myosin heavy chain IIa) (MyHC-IIa), transcript variant 24 (LOC608242), mRNA Length = 6057 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2935 caagaagaggaaactggaaga 2955
>ref|XM_858059.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 2 (Myosin heavy chain IIa) (MyHC-IIa), transcript variant 23 (LOC608242), mRNA Length = 6055 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2933 caagaagaggaaactggaaga 2953
>ref|XM_846006.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 2 (Myosin heavy chain IIa) (MyHC-IIa), transcript variant 2 (LOC608242), mRNA Length = 6052 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2930 caagaagaggaaactggaaga 2950
>ref|XM_858012.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 2 (Myosin heavy chain IIa) (MyHC-IIa), transcript variant 22 (LOC608242), mRNA Length = 6055 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2933 caagaagaggaaactggaaga 2953
>ref|XM_857985.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 2 (Myosin heavy chain IIa) (MyHC-IIa), transcript variant 21 (LOC608242), mRNA Length = 6028 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2906 caagaagaggaaactggaaga 2926
>ref|XM_857959.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 2 (Myosin heavy chain IIa) (MyHC-IIa), transcript variant 20 (LOC608242), mRNA Length = 6076 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2954 caagaagaggaaactggaaga 2974
>ref|XM_857934.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 2 (Myosin heavy chain IIa) (MyHC-IIa), transcript variant 19 (LOC608242), mRNA Length = 5941 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2819 caagaagaggaaactggaaga 2839
>ref|XM_536642.2| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 2 (Myosin heavy chain IIa) (MyHC-IIa), transcript variant 1 (LOC608242), mRNA Length = 6076 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2954 caagaagaggaaactggaaga 2974
>ref|XM_857510.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 50 (LOC479502), mRNA Length = 5991 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2898 caagaagaggaaactggaaga 2918
>ref|XM_857486.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 49 (LOC479502), mRNA Length = 6002 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2909 caagaagaggaaactggaaga 2929
>ref|XM_857459.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 48 (LOC479502), mRNA Length = 6021 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2928 caagaagaggaaactggaaga 2948
>ref|XM_857436.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 47 (LOC479502), mRNA Length = 6000 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2907 caagaagaggaaactggaaga 2927
>ref|XM_857412.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 46 (LOC479502), mRNA Length = 6021 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2928 caagaagaggaaactggaaga 2948
>ref|XM_857908.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 2 (Myosin heavy chain IIa) (MyHC-IIa), transcript variant 18 (LOC608242), mRNA Length = 6091 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2969 caagaagaggaaactggaaga 2989
>ref|XM_857884.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 2 (Myosin heavy chain IIa) (MyHC-IIa), transcript variant 17 (LOC608242), mRNA Length = 5986 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2954 caagaagaggaaactggaaga 2974
>ref|XM_857864.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 2 (Myosin heavy chain IIa) (MyHC-IIa), transcript variant 16 (LOC608242), mRNA Length = 5785 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2954 caagaagaggaaactggaaga 2974
>ref|XM_857836.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 2 (Myosin heavy chain IIa) (MyHC-IIa), transcript variant 15 (LOC608242), mRNA Length = 4381 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 1259 caagaagaggaaactggaaga 1279
>ref|XM_857816.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 2 (Myosin heavy chain IIa) (MyHC-IIa), transcript variant 14 (LOC608242), mRNA Length = 5767 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2954 caagaagaggaaactggaaga 2974
>ref|XM_857791.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 2 (Myosin heavy chain IIa) (MyHC-IIa), transcript variant 13 (LOC608242), mRNA Length = 5599 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2954 caagaagaggaaactggaaga 2974
>ref|XM_857772.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 2 (Myosin heavy chain IIa) (MyHC-IIa), transcript variant 12 (LOC608242), mRNA Length = 5827 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2789 caagaagaggaaactggaaga 2809
>ref|XM_857750.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 2 (Myosin heavy chain IIa) (MyHC-IIa), transcript variant 11 (LOC608242), mRNA Length = 5977 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2954 caagaagaggaaactggaaga 2974
>ref|XM_857064.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 33 (LOC479502), mRNA Length = 5772 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2763 caagaagaggaaactggaaga 2783
>ref|XM_857038.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 32 (LOC479502), mRNA Length = 5730 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2928 caagaagaggaaactggaaga 2948
>ref|XM_857013.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 31 (LOC479502), mRNA Length = 5712 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2928 caagaagaggaaactggaaga 2948
>ref|XM_856986.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 30 (LOC479502), mRNA Length = 5922 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2928 caagaagaggaaactggaaga 2948
>ref|XM_856955.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 29 (LOC479502), mRNA Length = 5232 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2928 caagaagaggaaactggaaga 2948
>ref|XM_856893.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 27 (LOC479502), mRNA Length = 5922 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2928 caagaagaggaaactggaaga 2948
>ref|XM_857385.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 45 (LOC479502), mRNA Length = 5889 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2796 caagaagaggaaactggaaga 2816
>ref|XM_857359.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 44 (LOC479502), mRNA Length = 6000 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2907 caagaagaggaaactggaaga 2927
>ref|XM_857333.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 43 (LOC479502), mRNA Length = 6021 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2928 caagaagaggaaactggaaga 2948
>ref|XM_857301.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 42 (LOC479502), mRNA Length = 5994 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2901 caagaagaggaaactggaaga 2921
>ref|XM_857273.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 41 (LOC479502), mRNA Length = 5952 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2859 caagaagaggaaactggaaga 2879
>ref|XM_857246.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 40 (LOC479502), mRNA Length = 5844 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2928 caagaagaggaaactggaaga 2948
>ref|XM_857224.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 39 (LOC479502), mRNA Length = 4719 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 1626 caagaagaggaaactggaaga 1646
>ref|XM_857196.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 38 (LOC479502), mRNA Length = 4329 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 1236 caagaagaggaaactggaaga 1256
>ref|XM_857166.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 37 (LOC479502), mRNA Length = 5931 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2928 caagaagaggaaactggaaga 2948
>ref|XM_857139.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 36 (LOC479502), mRNA Length = 5979 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2886 caagaagaggaaactggaaga 2906
>ref|XM_857116.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 35 (LOC479502), mRNA Length = 5967 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2874 caagaagaggaaactggaaga 2894
>ref|XM_857095.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 34 (LOC479502), mRNA Length = 5949 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2856 caagaagaggaaactggaaga 2876
>ref|XM_845251.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 2 (LOC479502), mRNA Length = 6021 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2928 caagaagaggaaactggaaga 2948
>ref|XM_856140.1| PREDICTED: Canis familiaris fast myosin heavy chain, transcript variant 3 (MYH1), mRNA Length = 5594 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2496 caagaagaggaaactggaaga 2516
>ref|XM_856112.1| PREDICTED: Canis familiaris fast myosin heavy chain, transcript variant 2 (MYH1), mRNA Length = 5581 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2487 caagaagaggaaactggaaga 2507
>ref|XM_546622.2| PREDICTED: Canis familiaris fast myosin heavy chain, transcript variant 1 (MYH1), mRNA Length = 5994 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2890 caagaagaggaaactggaaga 2910
>gb|DP000056.1| Pan troglodytes chromosome Y chry_random_3 genomic scaffold Length = 331329 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 295 tattaaatttgctgatgaaagacta 319 ||||||| ||||||||||||||||| Sbjct: 194989 tattaaacttgctgatgaaagacta 194965
>gb|AC163726.3| Pan troglodytes BAC clone CH251-653B19 from chromosome y, complete sequence Length = 207364 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 295 tattaaatttgctgatgaaagacta 319 ||||||| ||||||||||||||||| Sbjct: 71037 tattaaacttgctgatgaaagacta 71013
>gb|AC115740.8| Mus musculus chromosome 3, clone RP23-476G18, complete sequence Length = 226125 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 135 agaggaaactggaagaagttgaagg 159 ||||||||| ||||||||||||||| Sbjct: 17546 agaggaaacaggaagaagttgaagg 17522
>dbj|AB017819.1| Theragra chalcogramma mRNA for myosin heavy chain, partial cds Length = 3923 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 caagaagaggaaactggaaga 150 ||||||||||||||||||||| Sbjct: 2880 caagaagaggaaactggaaga 2900
>ref|XM_523785.1| PREDICTED: Pan troglodytes similar to myosin, heavy polypeptide 4, skeletal muscle (LOC468396), mRNA Length = 5763 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 aagaagaggaaactggaaga 150 |||||||||||||||||||| Sbjct: 2827 aagaagaggaaactggaaga 2846
>gb|AF196779.2| Homo sapiens chromosome X multiple clones map p11.23, complete sequence Length = 176767 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 77 gatgttgagaaaggagaggatgga 100 ||||||||||||||||||| |||| Sbjct: 18956 gatgttgagaaaggagaggttgga 18979
>gb|AC151903.3| Mus musculus BAC clone RP23-216I7 from chromosome 14, complete sequence Length = 232727 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 gtcttgtgacatttccccat 548 |||||||||||||||||||| Sbjct: 38299 gtcttgtgacatttccccat 38280
>gb|AC122479.3| Mus musculus BAC clone RP24-344E5 from chromosome 14, complete sequence Length = 185254 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 529 gtcttgtgacatttccccat 548 |||||||||||||||||||| Sbjct: 56720 gtcttgtgacatttccccat 56739
>ref|NM_001039730.1| Xenopus tropicalis nucleolar and coiled-body phosphoprotein 1 (nolc1), mRNA Length = 3167 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 cacgagaagaccaagaagaa 435 |||||||||||||||||||| Sbjct: 2692 cacgagaagaccaagaagaa 2711
>emb|AL646055.10| Mouse DNA sequence from clone RP23-382C18 on chromosome 11 Contains a aldo-keto reductase family 1 member B3 (aldose reductase) (Akr1b3) pseudogene, the gene for a novel protein similar to human methionine adenosyltransferase II beta (MAT2B), the Hmmr gene for hyaluronan mediated motility receptor (RHAMM), the gene for a novel protein (D11Ertd603e), the Ccng1 gene for cyclin G1 and three CpG islands, complete sequence Length = 193551 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 aggagaggatggaaaggctt 107 |||||||||||||||||||| Sbjct: 130806 aggagaggatggaaaggctt 130787
>emb|AL592065.7| Mouse DNA sequence from clone RP23-50E4 on chromosome 11 Contains the 3' end of a novel gene, two novel genes, the 5' end of the Brip1 gene for BRCA1 interacting protein C-terminal helicase 1 and a mitochondrial F0 complex H+ transporting ATP synthase subunit g (Atp5l) pseudogene, complete sequence Length = 200624 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 aagtcttgtgacatttcccc 546 |||||||||||||||||||| Sbjct: 82744 aagtcttgtgacatttcccc 82763
>emb|CR848717.7| Zebrafish DNA sequence from clone DKEY-148B12 in linkage group 5, complete sequence Length = 207800 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 atgatgcagttgttagcaag 133 |||||||||||||||||||| Sbjct: 80077 atgatgcagttgttagcaag 80096
>emb|AL773511.5| Mouse DNA sequence from clone RP24-66J23 on chromosome 4, complete sequence Length = 130914 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 573 tcttgctgaaagggaagaag 592 |||||||||||||||||||| Sbjct: 92562 tcttgctgaaagggaagaag 92543
>emb|CR352231.8| Zebrafish DNA sequence from clone CH211-216G8 in linkage group 16, complete sequence Length = 202686 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 262 taaaagtgcattccaacgggtgaa 285 ||||||||||||||| |||||||| Sbjct: 138865 taaaagtgcattccagcgggtgaa 138888
>dbj|AK137575.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830145M22 product:hypothetical protein, full insert sequence Length = 2315 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 aagtcttgtgacatttcccc 546 |||||||||||||||||||| Sbjct: 1348 aagtcttgtgacatttcccc 1329
>gb|AC008512.8| Homo sapiens chromosome 5 clone CTC-454K8, complete sequence Length = 110931 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 aagaggaaactggaagaagt 153 |||||||||||||||||||| Sbjct: 81220 aagaggaaactggaagaagt 81239
>gb|AC026409.4| Homo sapiens chromosome 5 clone CTC-437M9, complete sequence Length = 163384 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 aagaggaaactggaagaagt 153 |||||||||||||||||||| Sbjct: 98086 aagaggaaactggaagaagt 98067
>gb|AC021080.4|AC021080 Homo sapiens chromosome 5 clone CTC-203K17, complete sequence Length = 103522 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 aagaggaaactggaagaagt 153 |||||||||||||||||||| Sbjct: 65523 aagaggaaactggaagaagt 65542
>gb|AC008580.7| Homo sapiens chromosome 5 clone CTC-564J15, complete sequence Length = 122322 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 aagaggaaactggaagaagt 153 |||||||||||||||||||| Sbjct: 21549 aagaggaaactggaagaagt 21530
>emb|CR854984.10| Zebrafish DNA sequence from clone DKEY-62B6 in linkage group 16, complete sequence Length = 223943 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 taaaagtgcattccaacgggtgaa 285 ||||||||||||||| |||||||| Sbjct: 6787 taaaagtgcattccagcgggtgaa 6764
>emb|AJ011432.1|RNO011432 Rattus norvegicus gdnf gene Length = 19571 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 accaagaagaagcgcggaac 444 |||||||||||||||||||| Sbjct: 10218 accaagaagaagcgcggaac 10199
>emb|CR848207.2| Xenopus tropicalis finished cDNA, clone TGas105h10 Length = 3167 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 cacgagaagaccaagaagaa 435 |||||||||||||||||||| Sbjct: 2692 cacgagaagaccaagaagaa 2711
>gb|AE016796.1| Vibrio vulnificus CMCP6 chromosome II, complete sequence Length = 1844853 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 gcagttgttagcaagaagaggaaa 142 ||||||||||| |||||||||||| Sbjct: 1465279 gcagttgttaggaagaagaggaaa 1465302
>gb|AC124711.3| Mus musculus BAC clone RP24-100M12 from 12, complete sequence Length = 225134 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 ttaaatttgctgatgaaaga 316 |||||||||||||||||||| Sbjct: 82620 ttaaatttgctgatgaaaga 82601
>gb|AF023840.1|AF023840 Homo sapiens natural killer group protein 2-A (NKG2-A) gene, complete cds Length = 17549 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 461 attgatctacaaacccactcgatt 484 ||||||||||||||||||| |||| Sbjct: 3295 attgatctacaaacccactagatt 3272
>gb|BC064870.1| Xenopus tropicalis nucleolar and coiled-body phosphoprotein 1, mRNA (cDNA clone IMAGE:5335805), partial cds Length = 3154 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 cacgagaagaccaagaagaa 435 |||||||||||||||||||| Sbjct: 2666 cacgagaagaccaagaagaa 2685
>gb|U87998.1|MMU87998 Mus musculus cyclin G1 gene, partial cds Length = 10366 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 aggagaggatggaaaggctt 107 |||||||||||||||||||| Sbjct: 4606 aggagaggatggaaaggctt 4625
>emb|AL844198.7| Mouse DNA sequence from clone RP23-438P13 on chromosome 4, complete sequence Length = 176049 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 tgttgagaaaggagaggatg 98 |||||||||||||||||||| Sbjct: 98292 tgttgagaaaggagaggatg 98311
>dbj|AP004904.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT10C05, TM0062, complete sequence Length = 81367 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 atggatgttgagaaaggaga 93 |||||||||||||||||||| Sbjct: 73500 atggatgttgagaaaggaga 73481 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,219,483 Number of Sequences: 3902068 Number of extensions: 6219483 Number of successful extensions: 123820 Number of sequences better than 10.0: 127 Number of HSP's better than 10.0 without gapping: 127 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 123487 Number of HSP's gapped (non-prelim): 327 length of query: 631 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 608 effective length of database: 17,143,297,704 effective search space: 10423125004032 effective search space used: 10423125004032 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)