ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags9k10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_473383.1| Oryza sativa (japonica cultivar-group), predic... 206 6e-50
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 206 6e-50
3dbj|AK066297.1| Oryza sativa (japonica cultivar-group) cDNA clon... 206 6e-50
4emb|AL606728.3|OSJN00102 Oryza sativa genomic DNA, chromosome 4,... 206 6e-50
5gb|U54767.1|HVU54767 Hordeum vulgare caffeic acid O-methyltransf... 174 2e-40
6gb|AY122272.1| Zea mays cultivar B73 SET domain-containing prote... 92 3e-15
7gb|AC139728.3| Carollia perspicillata clone 29G20, complete sequ... 44 0.54
8gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold 44 0.54
9emb|AL603833.3| Human DNA sequence from clone RP11-453O12 on chr... 42 2.1
10emb|AL603648.3| Human DNA sequence from clone RP11-352K16 on chr... 42 2.1
11emb|AL357973.10| Human DNA sequence from clone RP4-675H14 on chr... 42 2.1
12emb|BX465220.18| Zebrafish DNA sequence from clone CH211-226O13 ... 42 2.1
13emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genom... 42 2.1
14emb|BX296567.23| Zebrafish DNA sequence from clone DKEY-261P22 i... 42 2.1
15gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 42 2.1
16ref|XM_688187.1| PREDICTED: Danio rerio similar to NOD3 protein ... 42 2.1
17gb|AC092218.2| Drosophila melanogaster clone BACR12B06, complete... 40 8.4
18gb|AC146171.2| Pan troglodytes BAC clone RP43-24K1 from 7, compl... 40 8.4
19gb|AC164701.4| Mus musculus BAC clone RP24-108J12 from chromosom... 40 8.4
20gb|AC135671.3| Mus musculus BAC clone RP23-440D14 from chromosom... 40 8.4
21gb|AC146025.2| Pan troglodytes BAC clone RP43-119E9 from 7, comp... 40 8.4
22gb|AC116748.8| Mus musculus chromosome 9, clone RP23-80L8, compl... 40 8.4
23emb|BX465863.11| Zebrafish DNA sequence from clone RP71-5C20 in ... 40 8.4
24gb|AC092919.5| Homo sapiens 3q BAC RP11-185E8 (Roswell Park Canc... 40 8.4
25gb|AC073023.7| Homo sapiens chromosome 8, clone RP11-211F2, comp... 40 8.4
26gb|AC073850.4| Homo sapiens BAC clone RP11-697H17 from 7, comple... 40 8.4
27gb|DP000051.1| Carollia perspicillata target 126 genomic scaffold 40 8.4
28gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 8.4
29gb|AC158134.8| Mus musculus chromosome 3, clone RP24-384O20, com... 40 8.4
30gb|AC147097.3| Pan troglodytes BAC clone RP43-51D4 from chromoso... 40 8.4
31gb|AC078806.18| Homo sapiens 3 BAC RP11-59B20 (Roswell Park Canc... 40 8.4
32ref|XM_341914.2| PREDICTED: Rattus norvegicus similar to Hypothe... 40 8.4
33dbj|AB017060.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 8.4
34emb|BX649457.15| Zebrafish DNA sequence from clone DKEYP-87E7 in... 40 8.4
35gb|AE003640.4| Drosophila melanogaster chromosome 2L, section 49... 40 8.4
36gb|AC006575.1|AC006575 Drosophila melanogaster, chromosome 2L, r... 40 8.4
37emb|AL845373.12| Mouse DNA sequence from clone RP23-211L7 on chr... 40 8.4
38emb|AL833566.1|HSM804879 Homo sapiens mRNA; cDNA DKFZp686O1044 (... 40 8.4
39emb|CT010457.7| Mouse DNA sequence from clone RP23-96M8 on chrom... 40 8.4
40dbj|AP003695.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 8.4 
>ref|XM_473383.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2526

 Score =  206 bits (104), Expect = 6e-50
 Identities = 206/240 (85%)
 Strand = Plus / Plus

                                                                        
Query: 347  tatgggggtttatatctagttgagaaatactggagggagaaagaaagcgaagatcgttat 406
            ||||||||||||||| |||| |||||||||||||||||||||||  |  | |||||||||
Sbjct: 1528 tatgggggtttatatatagtcgagaaatactggagggagaaagagggtaatgatcgttat 1587

                                                                        
Query: 407  gtttatatgttccgaatgagaagaatggcaggtcagaaacacattgacattgaggcaatt 466
            ||||||||||||||| ||||||||||||||||||||||||||||||||||  | |  |||
Sbjct: 1588 gtttatatgttccgactgagaagaatggcaggtcagaaacacattgacatccaagacatt 1647

                                                                        
Query: 467  atgaaatcaggacaggctgagccatatgatggtgtcataatgaaagatatatcccaaggg 526
             |||| |||||||| |||||  |||||| |||| | || || ||||||||||||| ||| 
Sbjct: 1648 ctgaattcaggacaagctgaatcatatggtggtattatcataaaagatatatcccgagga 1707

                                                                        
Query: 527  ttggagaggatcccaatatctgttttgaactcaatatctgatgagcatccagtgccctat 586
            ||||||| ||||||  |||||||| | || ||||||||||||||| | ||| ||||||||
Sbjct: 1708 ttggagaagatccctgtatctgttgttaattcaatatctgatgagtacccaatgccctat 1767



 Score =  172 bits (87), Expect = 9e-40
 Identities = 213/255 (83%)
 Strand = Plus / Plus

                                                                        
Query: 47   agggttgagctttgtgttattggtcttcatcgcccgcaccgtttagggattgatcatatc 106
            ||||| |||||||||||| |||||||||||||||| |||||  | ||  | |||||||||
Sbjct: 1222 agggtagagctttgtgttgttggtcttcatcgcccacaccgggtgggtgtagatcatatc 1281

                                                                        
Query: 107  aagaaggaggatggtacttgtatagctgttagcattgtggcatatgcaaatatttctcat 166
            ||  |||||||||| ||||| |||||||||||||||||  |||||||| |   |||  ||
Sbjct: 1282 aaacaggaggatgggacttgcatagctgttagcattgtatcatatgcacaatcttccgat 1341

                                                                        
Query: 167  gtcaagaataattttgatgccttggtgtattctggatcaaggacagctacaatgaatcag 226
             | ||||||||||| |||| |||||||||||||||| ||| |||||||| |   ||||||
Sbjct: 1342 attaagaataatttggatgtcttggtgtattctggagcaatgacagctatagccaatcag 1401

                                                                        
Query: 227  aagatagagggtccaaatcttgcactgaagaagagcatggataccaaaacaccagtccgt 286
            |||||||||||| | ||  | ||||| |||||||| ||||| || || ||||||||||||
Sbjct: 1402 aagatagagggtaccaacttagcactcaagaagagtatggacactaacacaccagtccgt 1461

                           
Query: 287  gttatccatgctttc 301
            |||||||||| ||||
Sbjct: 1462 gttatccatggtttc 1476
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  206 bits (104), Expect = 6e-50
 Identities = 206/240 (85%)
 Strand = Plus / Minus

                                                                            
Query: 347      tatgggggtttatatctagttgagaaatactggagggagaaagaaagcgaagatcgttat 406
                ||||||||||||||| |||| |||||||||||||||||||||||  |  | |||||||||
Sbjct: 27218561 tatgggggtttatatatagtcgagaaatactggagggagaaagagggtaatgatcgttat 27218502

                                                                            
Query: 407      gtttatatgttccgaatgagaagaatggcaggtcagaaacacattgacattgaggcaatt 466
                ||||||||||||||| ||||||||||||||||||||||||||||||||||  | |  |||
Sbjct: 27218501 gtttatatgttccgactgagaagaatggcaggtcagaaacacattgacatccaagacatt 27218442

                                                                            
Query: 467      atgaaatcaggacaggctgagccatatgatggtgtcataatgaaagatatatcccaaggg 526
                 |||| |||||||| |||||  |||||| |||| | || || ||||||||||||| ||| 
Sbjct: 27218441 ctgaattcaggacaagctgaatcatatggtggtattatcataaaagatatatcccgagga 27218382

                                                                            
Query: 527      ttggagaggatcccaatatctgttttgaactcaatatctgatgagcatccagtgccctat 586
                ||||||| ||||||  |||||||| | || ||||||||||||||| | ||| ||||||||
Sbjct: 27218381 ttggagaagatccctgtatctgttgttaattcaatatctgatgagtacccaatgccctat 27218322



 Score =  172 bits (87), Expect = 9e-40
 Identities = 213/255 (83%)
 Strand = Plus / Minus

                                                                            
Query: 47       agggttgagctttgtgttattggtcttcatcgcccgcaccgtttagggattgatcatatc 106
                ||||| |||||||||||| |||||||||||||||| |||||  | ||  | |||||||||
Sbjct: 27218867 agggtagagctttgtgttgttggtcttcatcgcccacaccgggtgggtgtagatcatatc 27218808

                                                                            
Query: 107      aagaaggaggatggtacttgtatagctgttagcattgtggcatatgcaaatatttctcat 166
                ||  |||||||||| ||||| |||||||||||||||||  |||||||| |   |||  ||
Sbjct: 27218807 aaacaggaggatgggacttgcatagctgttagcattgtatcatatgcacaatcttccgat 27218748

                                                                            
Query: 167      gtcaagaataattttgatgccttggtgtattctggatcaaggacagctacaatgaatcag 226
                 | ||||||||||| |||| |||||||||||||||| ||| |||||||| |   ||||||
Sbjct: 27218747 attaagaataatttggatgtcttggtgtattctggagcaatgacagctatagccaatcag 27218688

                                                                            
Query: 227      aagatagagggtccaaatcttgcactgaagaagagcatggataccaaaacaccagtccgt 286
                |||||||||||| | ||  | ||||| |||||||| ||||| || || ||||||||||||
Sbjct: 27218687 aagatagagggtaccaacttagcactcaagaagagtatggacactaacacaccagtccgt 27218628

                               
Query: 287      gttatccatgctttc 301
                |||||||||| ||||
Sbjct: 27218627 gttatccatggtttc 27218613
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>dbj|AK066297.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059A21, full
            insert sequence
          Length = 2712

 Score =  206 bits (104), Expect = 6e-50
 Identities = 206/240 (85%)
 Strand = Plus / Plus

                                                                        
Query: 347  tatgggggtttatatctagttgagaaatactggagggagaaagaaagcgaagatcgttat 406
            ||||||||||||||| |||| |||||||||||||||||||||||  |  | |||||||||
Sbjct: 1660 tatgggggtttatatatagtcgagaaatactggagggagaaagagggtaatgatcgttat 1719

                                                                        
Query: 407  gtttatatgttccgaatgagaagaatggcaggtcagaaacacattgacattgaggcaatt 466
            ||||||||||||||| ||||||||||||||||||||||||||||||||||  | |  |||
Sbjct: 1720 gtttatatgttccgactgagaagaatggcaggtcagaaacacattgacatccaagacatt 1779

                                                                        
Query: 467  atgaaatcaggacaggctgagccatatgatggtgtcataatgaaagatatatcccaaggg 526
             |||| |||||||| |||||  |||||| |||| | || || ||||||||||||| ||| 
Sbjct: 1780 ctgaattcaggacaagctgaatcatatggtggtattatcataaaagatatatcccgagga 1839

                                                                        
Query: 527  ttggagaggatcccaatatctgttttgaactcaatatctgatgagcatccagtgccctat 586
            ||||||| ||||||  |||||||| | || ||||||||||||||| | ||| ||||||||
Sbjct: 1840 ttggagaagatccctgtatctgttgttaattcaatatctgatgagtacccaatgccctat 1899



 Score =  172 bits (87), Expect = 9e-40
 Identities = 213/255 (83%)
 Strand = Plus / Plus

                                                                        
Query: 47   agggttgagctttgtgttattggtcttcatcgcccgcaccgtttagggattgatcatatc 106
            ||||| |||||||||||| |||||||||||||||| |||||  | ||  | |||||||||
Sbjct: 1354 agggtagagctttgtgttgttggtcttcatcgcccacaccgggtgggtgtagatcatatc 1413

                                                                        
Query: 107  aagaaggaggatggtacttgtatagctgttagcattgtggcatatgcaaatatttctcat 166
            ||  |||||||||| ||||| |||||||||||||||||  |||||||| |   |||  ||
Sbjct: 1414 aaacaggaggatgggacttgcatagctgttagcattgtatcatatgcacaatcttccgat 1473

                                                                        
Query: 167  gtcaagaataattttgatgccttggtgtattctggatcaaggacagctacaatgaatcag 226
             | ||||||||||| |||| |||||||||||||||| ||| |||||||| |   ||||||
Sbjct: 1474 attaagaataatttggatgtcttggtgtattctggagcaatgacagctatagccaatcag 1533

                                                                        
Query: 227  aagatagagggtccaaatcttgcactgaagaagagcatggataccaaaacaccagtccgt 286
            |||||||||||| | ||  | ||||| |||||||| ||||| || || ||||||||||||
Sbjct: 1534 aagatagagggtaccaacttagcactcaagaagagtatggacactaacacaccagtccgt 1593

                           
Query: 287  gttatccatgctttc 301
            |||||||||| ||||
Sbjct: 1594 gttatccatggtttc 1608
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>emb|AL606728.3|OSJN00102 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0038F03,
             complete sequence
          Length = 136656

 Score =  206 bits (104), Expect = 6e-50
 Identities = 206/240 (85%)
 Strand = Plus / Minus

                                                                         
Query: 347   tatgggggtttatatctagttgagaaatactggagggagaaagaaagcgaagatcgttat 406
             ||||||||||||||| |||| |||||||||||||||||||||||  |  | |||||||||
Sbjct: 49650 tatgggggtttatatatagtcgagaaatactggagggagaaagagggtaatgatcgttat 49591

                                                                         
Query: 407   gtttatatgttccgaatgagaagaatggcaggtcagaaacacattgacattgaggcaatt 466
             ||||||||||||||| ||||||||||||||||||||||||||||||||||  | |  |||
Sbjct: 49590 gtttatatgttccgactgagaagaatggcaggtcagaaacacattgacatccaagacatt 49531

                                                                         
Query: 467   atgaaatcaggacaggctgagccatatgatggtgtcataatgaaagatatatcccaaggg 526
              |||| |||||||| |||||  |||||| |||| | || || ||||||||||||| ||| 
Sbjct: 49530 ctgaattcaggacaagctgaatcatatggtggtattatcataaaagatatatcccgagga 49471

                                                                         
Query: 527   ttggagaggatcccaatatctgttttgaactcaatatctgatgagcatccagtgccctat 586
             ||||||| ||||||  |||||||| | || ||||||||||||||| | ||| ||||||||
Sbjct: 49470 ttggagaagatccctgtatctgttgttaattcaatatctgatgagtacccaatgccctat 49411



 Score =  172 bits (87), Expect = 9e-40
 Identities = 213/255 (83%)
 Strand = Plus / Minus

                                                                         
Query: 47    agggttgagctttgtgttattggtcttcatcgcccgcaccgtttagggattgatcatatc 106
             ||||| |||||||||||| |||||||||||||||| |||||  | ||  | |||||||||
Sbjct: 49956 agggtagagctttgtgttgttggtcttcatcgcccacaccgggtgggtgtagatcatatc 49897

                                                                         
Query: 107   aagaaggaggatggtacttgtatagctgttagcattgtggcatatgcaaatatttctcat 166
             ||  |||||||||| ||||| |||||||||||||||||  |||||||| |   |||  ||
Sbjct: 49896 aaacaggaggatgggacttgcatagctgttagcattgtatcatatgcacaatcttccgat 49837

                                                                         
Query: 167   gtcaagaataattttgatgccttggtgtattctggatcaaggacagctacaatgaatcag 226
              | ||||||||||| |||| |||||||||||||||| ||| |||||||| |   ||||||
Sbjct: 49836 attaagaataatttggatgtcttggtgtattctggagcaatgacagctatagccaatcag 49777

                                                                         
Query: 227   aagatagagggtccaaatcttgcactgaagaagagcatggataccaaaacaccagtccgt 286
             |||||||||||| | ||  | ||||| |||||||| ||||| || || ||||||||||||
Sbjct: 49776 aagatagagggtaccaacttagcactcaagaagagtatggacactaacacaccagtccgt 49717

                            
Query: 287   gttatccatgctttc 301
             |||||||||| ||||
Sbjct: 49716 gttatccatggtttc 49702
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>gb|U54767.1|HVU54767 Hordeum vulgare caffeic acid O-methyltransferase (HvCOMT) gene,
            complete cds
          Length = 5238

 Score =  174 bits (88), Expect = 2e-40
 Identities = 116/124 (93%), Gaps = 1/124 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gttggccatgtgcccggnaacccatgttggtgatatctttcgtgcaagggttgagctttg 60
            |||||||||||||| || || |||||| ||||||||||||||||||||||||||||||||
Sbjct: 1546 gttggccatgtgcctgg-aatccatgtcggtgatatctttcgtgcaagggttgagctttg 1604

                                                                        
Query: 61   tgttattggtcttcatcgcccgcaccgtttagggattgatcatatcaagaaggaggatgg 120
             ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| 
Sbjct: 1605 cgttattggtcttcattgcccacaccgtttagggattgatcatatcaagaaggaggatga 1664

                
Query: 121  tact 124
            ||||
Sbjct: 1665 tact 1668
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>gb|AY122272.1| Zea mays cultivar B73 SET domain-containing protein SET104 (SET104)
            mRNA, complete cds
          Length = 2930

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 94/110 (85%)
 Strand = Plus / Plus

                                                                        
Query: 347  tatgggggtttatatctagttgagaaatactggagggagaaagaaagcgaagatcgttat 406
            ||||| |||||||| || |||||||| |||||||||||||||||    | ||| ||||||
Sbjct: 1781 tatggtggtttataccttgttgagaagtactggagggagaaagagcatggagaccgttat 1840

                                                              
Query: 407  gtttatatgttccgaatgagaagaatggcaggtcagaaacacattgacat 456
            || |||||||||||| |||||||||||| ||| || || |||||||||||
Sbjct: 1841 gtgtatatgttccgactgagaagaatggaaggacaaaagcacattgacat 1890



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Plus

                                                             
Query: 257  aagagcatggataccaaaacaccagtccgtgttatccatgctttcacca 305
            |||||||||||||| || ||||||||||||||||||||||  |||||||
Sbjct: 1697 aagagcatggatactaatacaccagtccgtgttatccatgggttcacca 1745



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                        
Query: 47   agggttgagctttgtgttattggtcttcatcgcccgcaccgtttagggattgatcatatc 106
            ||||| |||||||||||| ||||||| |||||||| ||  |  |||| ||||||  || |
Sbjct: 1487 agggtagagctttgtgttgttggtctccatcgcccacatagggtaggtattgattgtacc 1546

                             
Query: 107  aagaaggaggatggtac 123
            |||||||| ||||||||
Sbjct: 1547 aagaaggatgatggtac 1563
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>gb|AC139728.3| Carollia perspicillata clone 29G20, complete sequence
          Length = 125364

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 547   tgttttgaactcaatatctgat 568
             ||||||||||||||||||||||
Sbjct: 69033 tgttttgaactcaatatctgat 69012
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>gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold
          Length = 1501503

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 547    tgttttgaactcaatatctgat 568
              ||||||||||||||||||||||
Sbjct: 622375 tgttttgaactcaatatctgat 622354
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>emb|AL603833.3| Human DNA sequence from clone RP11-453O12 on chromosome 6, complete
            sequence
          Length = 40111

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 169  caagaataattttgatgcctt 189
            |||||||||||||||||||||
Sbjct: 1917 caagaataattttgatgcctt 1897
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>emb|AL603648.3| Human DNA sequence from clone RP11-352K16 on chromosome 6, complete
             sequence
          Length = 53569

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 169   caagaataattttgatgcctt 189
             |||||||||||||||||||||
Sbjct: 53486 caagaataattttgatgcctt 53466
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>emb|AL357973.10| Human DNA sequence from clone RP4-675H14 on chromosome 1, complete
            sequence
          Length = 106846

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 148  atatgcaaatatttctcatgt 168
            |||||||||||||||||||||
Sbjct: 9618 atatgcaaatatttctcatgt 9598
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>emb|BX465220.18| Zebrafish DNA sequence from clone CH211-226O13 in linkage group 21,
              complete sequence
          Length = 209782

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 181    tgatgccttggtgtattctgg 201
              |||||||||||||||||||||
Sbjct: 191535 tgatgccttggtgtattctgg 191515
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>emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genome; segment 10/16
          Length = 349981

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 198   ctggatcaaggacagctacaa 218
             |||||||||||||||||||||
Sbjct: 98366 ctggatcaaggacagctacaa 98346
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>emb|BX296567.23| Zebrafish DNA sequence from clone DKEY-261P22 in linkage group 15,
              complete sequence
          Length = 224041

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 181    tgatgccttggtgtattctgg 201
              |||||||||||||||||||||
Sbjct: 105957 tgatgccttggtgtattctgg 105937
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 198     ctggatcaaggacagctacaa 218
               |||||||||||||||||||||
Sbjct: 2706742 ctggatcaaggacagctacaa 2706762
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>ref|XM_688187.1| PREDICTED: Danio rerio similar to NOD3 protein (LOC564863), mRNA
          Length = 2756

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 181  tgatgccttggtgtattctgg 201
            |||||||||||||||||||||
Sbjct: 1370 tgatgccttggtgtattctgg 1390
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>gb|AC092218.2| Drosophila melanogaster clone BACR12B06, complete sequence
          Length = 164565

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 138   gcattgtggcatatgcaaat 157
             ||||||||||||||||||||
Sbjct: 54797 gcattgtggcatatgcaaat 54778
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>gb|AC146171.2| Pan troglodytes BAC clone RP43-24K1 from 7, complete sequence
          Length = 131575

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 141   ttgtggcatatgcaaatatttctc 164
             |||||||||||||||||| |||||
Sbjct: 89584 ttgtggcatatgcaaataattctc 89561
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>gb|AC164701.4| Mus musculus BAC clone RP24-108J12 from chromosome 17, complete
             sequence
          Length = 184296

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   gcatatgcaaatatttctca 165
             ||||||||||||||||||||
Sbjct: 53519 gcatatgcaaatatttctca 53538
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>gb|AC135671.3| Mus musculus BAC clone RP23-440D14 from chromosome 17, complete
            sequence
          Length = 188307

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 146  gcatatgcaaatatttctca 165
            ||||||||||||||||||||
Sbjct: 8657 gcatatgcaaatatttctca 8638
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>gb|AC146025.2| Pan troglodytes BAC clone RP43-119E9 from 7, complete sequence
          Length = 156630

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 141  ttgtggcatatgcaaatatttctc 164
            |||||||||||||||||| |||||
Sbjct: 6456 ttgtggcatatgcaaataattctc 6479
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>gb|AC116748.8| Mus musculus chromosome 9, clone RP23-80L8, complete sequence
          Length = 268886

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 366    ttgagaaatactggagggag 385
              ||||||||||||||||||||
Sbjct: 114448 ttgagaaatactggagggag 114467
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>emb|BX465863.11| Zebrafish DNA sequence from clone RP71-5C20 in linkage group 5,
             complete sequence
          Length = 117261

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 141   ttgtggcatatgcaaatatt 160
             ||||||||||||||||||||
Sbjct: 85099 ttgtggcatatgcaaatatt 85118
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>gb|AC092919.5| Homo sapiens 3q BAC RP11-185E8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 101121

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 246   ttgcactgaagaagagcatg 265
             ||||||||||||||||||||
Sbjct: 17623 ttgcactgaagaagagcatg 17604
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>gb|AC073023.7| Homo sapiens chromosome 8, clone RP11-211F2, complete sequence
          Length = 171438

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 174   ataattttgatgccttggtg 193
             ||||||||||||||||||||
Sbjct: 68746 ataattttgatgccttggtg 68765
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>gb|AC073850.4| Homo sapiens BAC clone RP11-697H17 from 7, complete sequence
          Length = 183846

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 141   ttgtggcatatgcaaatatttctc 164
             |||||||||||||||||| |||||
Sbjct: 85610 ttgtggcatatgcaaataattctc 85633
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>gb|DP000051.1| Carollia perspicillata target 126 genomic scaffold
          Length = 501879

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 547   tgttttgaactcaatatctg 566
             ||||||||||||||||||||
Sbjct: 40406 tgttttgaactcaatatctg 40387
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 199     tggatcaaggacagctacaa 218
               ||||||||||||||||||||
Sbjct: 3152901 tggatcaaggacagctacaa 3152882
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>gb|AC158134.8| Mus musculus chromosome 3, clone RP24-384O20, complete sequence
          Length = 209278

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 378   ggagggagaaagaaagcgaa 397
             ||||||||||||||||||||
Sbjct: 93500 ggagggagaaagaaagcgaa 93519
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>gb|AC147097.3| Pan troglodytes BAC clone RP43-51D4 from chromosome 7, complete sequence
          Length = 192069

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 141    ttgtggcatatgcaaatatttctc 164
              |||||||||||||||||| |||||
Sbjct: 113891 ttgtggcatatgcaaataattctc 113914
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>gb|AC078806.18| Homo sapiens 3 BAC RP11-59B20 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 141059

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 178   ttttgatgccttggtgtatt 197
             ||||||||||||||||||||
Sbjct: 45204 ttttgatgccttggtgtatt 45223
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>ref|XM_341914.2| PREDICTED: Rattus norvegicus similar to Hypothetical protein KIAA0419
            (predicted) (LOC361634), mRNA
          Length = 3332

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 116  gatggtacttgtatagctgt 135
            ||||||||||||||||||||
Sbjct: 1635 gatggtacttgtatagctgt 1654
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>dbj|AB017060.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K18J17
          Length = 54252

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 547   tgttttgaactcaatatctg 566
             ||||||||||||||||||||
Sbjct: 35741 tgttttgaactcaatatctg 35722
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>emb|BX649457.15| Zebrafish DNA sequence from clone DKEYP-87E7 in linkage group 22,
              complete sequence
          Length = 159207

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 147    catatgcaaatatttctcat 166
              ||||||||||||||||||||
Sbjct: 153581 catatgcaaatatttctcat 153600
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>gb|AE003640.4| Drosophila melanogaster chromosome 2L, section 49 of 83 of the complete
             sequence
          Length = 271118

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   gcattgtggcatatgcaaat 157
             ||||||||||||||||||||
Sbjct: 98150 gcattgtggcatatgcaaat 98169
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>gb|AC006575.1|AC006575 Drosophila melanogaster, chromosome 2L, region 34C1-34C5, BAC clones
             DS00157 and BACR48M03, complete sequence
          Length = 68133

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 138   gcattgtggcatatgcaaat 157
             ||||||||||||||||||||
Sbjct: 28658 gcattgtggcatatgcaaat 28639
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>emb|AL845373.12| Mouse DNA sequence from clone RP23-211L7 on chromosome 2, complete
              sequence
          Length = 228651

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 305    attaatgctaagaagaacag 324
              ||||||||||||||||||||
Sbjct: 126863 attaatgctaagaagaacag 126844
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>emb|AL833566.1|HSM804879 Homo sapiens mRNA; cDNA DKFZp686O1044 (from clone DKFZp686O1044)
          Length = 2426

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 178  ttttgatgccttggtgtatt 197
            ||||||||||||||||||||
Sbjct: 1530 ttttgatgccttggtgtatt 1511
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>emb|CT010457.7| Mouse DNA sequence from clone RP23-96M8 on chromosome 9, complete
              sequence
          Length = 259964

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 366    ttgagaaatactggagggag 385
              ||||||||||||||||||||
Sbjct: 259121 ttgagaaatactggagggag 259140
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>dbj|AP003695.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1976B1, complete
             sequence
          Length = 160082

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 174   ataattttgatgccttggtg 193
             ||||||||||||||||||||
Sbjct: 31393 ataattttgatgccttggtg 31412


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,116,902
Number of Sequences: 3902068
Number of extensions: 6116902
Number of successful extensions: 114628
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114421
Number of HSP's gapped (non-prelim): 193
length of query: 619
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 596
effective length of database: 17,143,297,704
effective search space: 10217405431584
effective search space used: 10217405431584
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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