ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags9k02 |
|---|---|
| Clone Library Name | barley_pub |
>FBXL2_HUMAN (Q9UKC9) F-box/LRR-repeat protein 2 (F-box and leucine-rich repeat| protein 2) (F-box protein FBL2/FBL3) Length = 423 Score = 42.7 bits (99), Expect = 7e-04 Identities = 45/162 (27%), Positives = 61/162 (37%), Gaps = 3/162 (1%) Frame = +3 Query: 54 CTNLVNVNLNGCTNLHELVCGSDYRLSGDMP-VDAPPPDS-TPDNTKEIKESMDCR-LEV 224 C N+ ++NLNGCT + + C S R + +D S T + K I E CR LE Sbjct: 103 CRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGISEG--CRNLEY 160 Query: 225 LNCTGCPNIKKVVIPSTANYLNLSKINLNLSANLKEVDLKXXXXXXXXXXXXXXXEILKL 404 LN + C I K I E L Sbjct: 161 LNLSWCDQITKDGI-----------------------------------------EALVR 179 Query: 405 DCPRLANLQLLACTMLQEDELKSALSFCGALEILNVHSCPQI 530 C L L L CT L+++ LK ++C L LN+ SC +I Sbjct: 180 GCRGLKALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRI 221 Score = 29.3 bits (64), Expect = 7.8 Identities = 14/49 (28%), Positives = 22/49 (44%) Frame = +3 Query: 405 DCPRLANLQLLACTMLQEDELKSALSFCGALEILNVHSCPQINTLDFGG 551 +C + +L L CT + + S FC L+ L++ SC I G Sbjct: 102 NCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKG 150
>FBXL2_MOUSE (Q8BH16) F-box/LRR-repeat protein 2 (F-box and leucine-rich repeat| protein 2) Length = 423 Score = 41.6 bits (96), Expect = 0.002 Identities = 45/162 (27%), Positives = 60/162 (37%), Gaps = 3/162 (1%) Frame = +3 Query: 54 CTNLVNVNLNGCTNLHELVCGSDYRLSGDMP-VDAPPPDS-TPDNTKEIKESMDCR-LEV 224 C N+ ++NLNGCT + + C S R + +D S T + K I E CR LE Sbjct: 103 CRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSVTNSSLKGISEG--CRNLEY 160 Query: 225 LNCTGCPNIKKVVIPSTANYLNLSKINLNLSANLKEVDLKXXXXXXXXXXXXXXXEILKL 404 LN + C I K I E L Sbjct: 161 LNLSWCDQITKEGI-----------------------------------------EALVR 179 Query: 405 DCPRLANLQLLACTMLQEDELKSALSFCGALEILNVHSCPQI 530 C L L L CT L+++ LK + C L LN+ SC +I Sbjct: 180 GCRGLKALLLRGCTQLEDEALKHIQNHCHELVSLNLQSCSRI 221
>LRC29_HUMAN (Q8WV35) Leucine-rich repeat-containing protein 29| (F-box/LRR-repeat protein 9) (F-box and leucine-rich repeat protein 9) (F-box protein FBL9) Length = 223 Score = 39.3 bits (90), Expect = 0.007 Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 10/116 (8%) Frame = +3 Query: 216 LEVLNCTGCPNIKKVVIPSTANYLNLSKINLNLSANLKEVDLKXXXXXXXXXXXXXXXEI 395 L+ L+ T C + + +L L +++L+L L + L Sbjct: 77 LQELDLTACSKLTDASLAKVLQFLQLRQLSLSLLPELTDNGLVAVARGCPSLEHLALSHC 136 Query: 396 LKLD----------CPRLANLQLLACTMLQEDELKSALSFCGALEILNVHSCPQIN 533 +L PRL +L L +C+ L E L + C L +L+V +CP IN Sbjct: 137 SRLSDKGWAQAASSWPRLQHLNLSSCSQLIEQTLDAIGQACRQLRVLDVATCPGIN 192
>FBX37_MOUSE (Q91W61) F-box only protein 37 (F-box/LRR-repeat protein 15)| Length = 296 Score = 37.4 bits (85), Expect = 0.028 Identities = 26/105 (24%), Positives = 41/105 (39%) Frame = +3 Query: 216 LEVLNCTGCPNIKKVVIPSTANYLNLSKINLNLSANLKEVDLKXXXXXXXXXXXXXXXEI 395 LE L+ T C +K I A +L+L+ N D + Sbjct: 164 LEELDLTACRQLKDEAIVYLAQRRGAGLRSLSLAVNANVGD--------------TAVQE 209 Query: 396 LKLDCPRLANLQLLACTMLQEDELKSALSFCGALEILNVHSCPQI 530 L +CP+L +L L C + D +++ +C AL L V C + Sbjct: 210 LARNCPQLEHLDLTGCLRVGSDGVRTLAEYCPALRSLRVRHCHHV 254 Score = 30.4 bits (67), Expect = 3.5 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = +3 Query: 408 CPRLANLQLLACTMLQEDELKSALSFCGALEILNVHSCPQI 530 CPRL L L C + L+ C ALE L++ +C Q+ Sbjct: 135 CPRLQRLSLAHCDWVDGLALRGLADRCPALEELDLTACRQL 175
>FXL20_HUMAN (Q96IG2) F-box/LRR-repeat protein 20 (F-box and leucine-rich repeat| protein 20) (F-box/LRR-repeat protein 2-like) Length = 436 Score = 36.6 bits (83), Expect = 0.049 Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 2/112 (1%) Frame = +3 Query: 201 SMDCR-LEVLNCTGCPNIKKVVIPSTANYLN-LSKINLNLSANLKEVDLKXXXXXXXXXX 374 + +CR +EVLN GC S + + + L ++L ++ + LK Sbjct: 113 AQNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKA--------- 163 Query: 375 XXXXXEILKLDCPRLANLQLLACTMLQEDELKSALSFCGALEILNVHSCPQI 530 L CP L L + C + +D +++ + CG L+ L + C Q+ Sbjct: 164 -------LSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQL 208 Score = 33.9 bits (76), Expect = 0.31 Identities = 39/162 (24%), Positives = 59/162 (36%), Gaps = 3/162 (1%) Frame = +3 Query: 54 CTNLVNVNLNGCTNLHELVCGSDYRLSGDM-PVD-APPPDSTPDNTKEIKESMDCRLEVL 227 C N+ +NLNGCT + C S + + +D A T + K + E LE L Sbjct: 116 CRNIEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGCPL-LEQL 174 Query: 228 NCTGCPNIKKVVIPSTANYL-NLSKINLNLSANLKEVDLKXXXXXXXXXXXXXXXEILKL 404 N + C + K I + L + L L++ LK + Sbjct: 175 NISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEALK----------------YIGA 218 Query: 405 DCPRLANLQLLACTMLQEDELKSALSFCGALEILNVHSCPQI 530 CP L L L C + ++ L + C L+ L C I Sbjct: 219 HCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNI 260
>FBX37_HUMAN (Q9H469) F-box only protein 37 (F-box/LRR-repeat protein 15)| Length = 296 Score = 35.0 bits (79), Expect = 0.14 Identities = 25/105 (23%), Positives = 39/105 (37%) Frame = +3 Query: 216 LEVLNCTGCPNIKKVVIPSTANYLNLSKINLNLSANLKEVDLKXXXXXXXXXXXXXXXEI 395 LE L+ T C +K I A +L+L+ N D + Sbjct: 164 LEELDLTACRQLKDEAIVYLAQRRGAGLRSLSLAVNANVGD--------------AAVQE 209 Query: 396 LKLDCPRLANLQLLACTMLQEDELKSALSFCGALEILNVHSCPQI 530 L +CP L +L L C + D +++ +C L L V C + Sbjct: 210 LARNCPELHHLDLTGCLRVGSDGVRTLAEYCPVLRSLRVRHCHHV 254 Score = 30.4 bits (67), Expect = 3.5 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = +3 Query: 408 CPRLANLQLLACTMLQEDELKSALSFCGALEILNVHSCPQI 530 CPRL L L C + L+ C ALE L++ +C Q+ Sbjct: 135 CPRLQRLSLAHCDWVDGLALRGLADRCPALEELDLTACRQL 175
>FXL20_RAT (Q9QZH7) F-box/LRR-repeat protein 20 (F-box and leucine-rich repeat| protein 20) (F-box/LRR-repeat protein 2-like) Length = 276 Score = 34.7 bits (78), Expect = 0.18 Identities = 25/112 (22%), Positives = 47/112 (41%), Gaps = 2/112 (1%) Frame = +3 Query: 201 SMDCR-LEVLNCTGCPNIKKVVIPSTANYLN-LSKINLNLSANLKEVDLKXXXXXXXXXX 374 + +CR +EVL+ GC S + + + L ++L ++ + LK Sbjct: 113 AQNCRNIEVLSLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKA--------- 163 Query: 375 XXXXXEILKLDCPRLANLQLLACTMLQEDELKSALSFCGALEILNVHSCPQI 530 L CP L L + C + +D +++ + CG L+ L + C Q+ Sbjct: 164 -------LSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQL 208 Score = 32.0 bits (71), Expect = 1.2 Identities = 38/162 (23%), Positives = 59/162 (36%), Gaps = 3/162 (1%) Frame = +3 Query: 54 CTNLVNVNLNGCTNLHELVCGSDYRLSGDM-PVD-APPPDSTPDNTKEIKESMDCRLEVL 227 C N+ ++LNGCT + C S + + +D A T + K + E LE L Sbjct: 116 CRNIEVLSLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGCPL-LEQL 174 Query: 228 NCTGCPNIKKVVIPSTANYL-NLSKINLNLSANLKEVDLKXXXXXXXXXXXXXXXEILKL 404 N + C + K I + L + L L++ LK + Sbjct: 175 NISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEALK----------------YIGA 218 Query: 405 DCPRLANLQLLACTMLQEDELKSALSFCGALEILNVHSCPQI 530 CP L L L C + ++ L + C L+ L C I Sbjct: 219 HCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNI 260
>FXL20_MOUSE (Q9CZV8) F-box/LRR-repeat protein 20 (F-box and leucine-rich repeat| protein 20) (F-box/LRR-repeat protein 2-like) Length = 436 Score = 34.7 bits (78), Expect = 0.18 Identities = 25/112 (22%), Positives = 47/112 (41%), Gaps = 2/112 (1%) Frame = +3 Query: 201 SMDCR-LEVLNCTGCPNIKKVVIPSTANYLN-LSKINLNLSANLKEVDLKXXXXXXXXXX 374 + +CR +EVL+ GC S + + + L ++L ++ + LK Sbjct: 113 AQNCRNIEVLSLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKA--------- 163 Query: 375 XXXXXEILKLDCPRLANLQLLACTMLQEDELKSALSFCGALEILNVHSCPQI 530 L CP L L + C + +D +++ + CG L+ L + C Q+ Sbjct: 164 -------LSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQL 208 Score = 32.0 bits (71), Expect = 1.2 Identities = 38/162 (23%), Positives = 59/162 (36%), Gaps = 3/162 (1%) Frame = +3 Query: 54 CTNLVNVNLNGCTNLHELVCGSDYRLSGDM-PVD-APPPDSTPDNTKEIKESMDCRLEVL 227 C N+ ++LNGCT + C S + + +D A T + K + E LE L Sbjct: 116 CRNIEVLSLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGCPL-LEQL 174 Query: 228 NCTGCPNIKKVVIPSTANYL-NLSKINLNLSANLKEVDLKXXXXXXXXXXXXXXXEILKL 404 N + C + K I + L + L L++ LK + Sbjct: 175 NISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEALK----------------YIGA 218 Query: 405 DCPRLANLQLLACTMLQEDELKSALSFCGALEILNVHSCPQI 530 CP L L L C + ++ L + C L+ L C I Sbjct: 219 HCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNI 260
>FBXL7_HUMAN (Q9UJT9) F-box/LRR-repeat protein 7 (F-box and leucine-rich repeat| protein 7) (F-box protein FBL6/FBL7) Length = 491 Score = 33.9 bits (76), Expect = 0.31 Identities = 32/166 (19%), Positives = 65/166 (39%) Frame = +3 Query: 51 CCTNLVNVNLNGCTNLHELVCGSDYRLSGDMPVDAPPPDSTPDNTKEIKESMDCRLEVLN 230 CC L + ++GC Y +S + D S+ LE L+ Sbjct: 210 CCPELRRLEVSGC-----------YNISNEAVFDV--------------VSLCPNLEHLD 244 Query: 231 CTGCPNIKKVVIPSTANYLNLSKINLNLSANLKEVDLKXXXXXXXXXXXXXXXEILKLDC 410 +GC + + + A+ + LS + + K++ ++ + C Sbjct: 245 VSGCSKVTCISLTREAS-IKLSPL------HGKQISIRYLDMTDCFVLEDEGLHTIAAHC 297 Query: 411 PRLANLQLLACTMLQEDELKSALSFCGALEILNVHSCPQINTLDFG 548 +L +L L C L ++ L+ + +C +++ L+V C ++ DFG Sbjct: 298 TQLTHLYLRRCVRLTDEGLRYLVIYCASIKELSVSDCRFVS--DFG 341
>FBXL4_HUMAN (Q9UKA2) F-box/LRR-repeat protein 4 (F-box and leucine-rich repeat| protein 4) (F-box protein FBL4/FBL5) Length = 621 Score = 33.9 bits (76), Expect = 0.31 Identities = 48/198 (24%), Positives = 75/198 (37%), Gaps = 21/198 (10%) Frame = +3 Query: 3 SYSSIGQXCDXKXLLACCTNLVNVNL----NGCTNLHELVCGS-----DYRLSGDMPVDA 155 +++ I + C K L+ T + L N C+ L L GS DY + M Sbjct: 418 AFNHIAKLCSLKRLVLYRTKVEQTALLSILNFCSELQHLSLGSCVMIEDYDVIASMIGAK 477 Query: 156 PPPDSTPD--NTKEIKESMDCRL-------EVLNCTGCPNIKKVV--IPSTANYL-NLSK 299 T D K I E+ L E L+ CP ++ A+ L NL K Sbjct: 478 CKKLRTLDLWRCKNITENGIAELASGCPLLEELDLGWCPTLQSSTGCFTRLAHQLPNLQK 537 Query: 300 INLNLSANLKEVDLKXXXXXXXXXXXXXXXEILKLDCPRLANLQLLACTMLQEDELKSAL 479 + L + ++ + D+ + L +C RL L +L M+ L+ L Sbjct: 538 LFLTANRSVCDTDI----------------DELACNCTRLQQLDILGTRMVSPASLRKLL 581 Query: 480 SFCGALEILNVHSCPQIN 533 C L +L+V C QI+ Sbjct: 582 ESCKDLSLLDVSFCSQID 599
>FXL13_MOUSE (Q8CDU4) F-box/LRR-repeat protein 13 (F-box and leucine-rich repeat| protein 13) Length = 790 Score = 32.3 bits (72), Expect = 0.92 Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 13/118 (11%) Frame = +3 Query: 216 LEVLNCTGCPNIKKVVIPSTANYLNLSKINLN--LSAN-----------LKEVDLKXXXX 356 L LN C ++ + I A+ L+L ++L+ L +N L+EV + Sbjct: 558 LHYLNLRNCEHLTDLAIEYIASMLSLISVDLSGTLISNEGMTILSRHRKLREVSVSDCVN 617 Query: 357 XXXXXXXXXXXEILKLDCPRLANLQLLACTMLQEDELKSALSFCGALEILNVHSCPQI 530 L L+ +L + C+ L +D +K+ FC + LN+ CP+I Sbjct: 618 ITDFGIRAYCKTSLLLE-----HLDVSYCSQLTDDIIKTIAIFCTRITSLNIAGCPKI 670
>CRYD_LYCES (Q38JU2) Cryptochrome DASH, chloroplast/mitochondrial precursor| (Cryptochrome-3) Length = 577 Score = 31.6 bits (70), Expect = 1.6 Identities = 19/55 (34%), Positives = 29/55 (52%) Frame = +3 Query: 81 NGCTNLHELVCGSDYRLSGDMPVDAPPPDSTPDNTKEIKESMDCRLEVLNCTGCP 245 +G T ELV GS D+P D +S PD + ++S++ + +V NCT P Sbjct: 215 SGNTTKLELVWGSTMYHIDDLPFDC---ESLPDVYTQFRKSVEYKSKVRNCTKLP 266
>SPR1_SACBA (Q876J2) Sporulation-specific glucan 1,3-beta-glucosidase precursor| (EC 3.2.1.58) (Exo-1,3-beta-glucanase) Length = 445 Score = 30.8 bits (68), Expect = 2.7 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 5/53 (9%) Frame = -3 Query: 281 VGR*RNNNFLNIWTTSTVENFKPTIHTLLDLFS-----IVWCRIRGGSINWHV 138 +G NN + +W+ +N + I LD F I+WC SI W V Sbjct: 370 IGSCANNENVGLWSEERKQNTRKFIEAQLDAFEMTGGWIMWCYKTENSIEWDV 422
>SNIP_RAT (Q9QXY2) p130Cas-associated protein (p140Cap) (SNAP-25-interacting| protein) (SNIP) Length = 1197 Score = 30.8 bits (68), Expect = 2.7 Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 3/35 (8%) Frame = +3 Query: 81 NGCTNLHELVCGSDYRLSGDMPVDAPPP---DSTP 176 NG VCGS R SG PV PPP STP Sbjct: 638 NGAATPSAPVCGSGSRSSGATPVSGPPPPAVSSTP 672
>WRK19_ARATH (Q9SZ67) Probable WRKY transcription factor 19 (WRKY DNA-binding| protein 19) Length = 1895 Score = 30.4 bits (67), Expect = 3.5 Identities = 45/183 (24%), Positives = 71/183 (38%), Gaps = 29/183 (15%) Frame = +3 Query: 45 LACCTNLVNVNLNGCTNLHELVCGSDY-------RLSGDMPVDAPPPDSTPDNTKEIKES 203 L+ TNL +++L GC +L L Y L G ++ P ++ Sbjct: 1277 LSSATNLEHIDLEGCNSLLSLSQSISYLKKLVFLNLKGCSKLENIPSMVDLES------- 1329 Query: 204 MDCRLEVLNCTGC----------PNIKKVV--------IPST-ANYLNLSKINLNLSANL 326 LEVLN +GC PN+K++ IPS+ N + L K++L S +L Sbjct: 1330 ----LEVLNLSGCSKLGNFPEISPNVKELYMGGTMIQEIPSSIKNLVLLEKLDLENSRHL 1385 Query: 327 KEVD---LKXXXXXXXXXXXXXXXEILKLDCPRLANLQLLACTMLQEDELKSALSFCGAL 497 K + K E R+ L+ L + EL S++S+ AL Sbjct: 1386 KNLPTSIYKLKHLETLNLSGCISLERFPDSSRRMKCLRFLDLSRTDIKELPSSISYLTAL 1445 Query: 498 EIL 506 + L Sbjct: 1446 DEL 1448
>SNIP_MOUSE (Q9QWI6) p130Cas-associated protein (p140Cap) (SNAP-25-interacting| protein) (SNIP) Length = 1250 Score = 30.0 bits (66), Expect = 4.5 Identities = 14/30 (46%), Positives = 15/30 (50%) Frame = +3 Query: 81 NGCTNLHELVCGSDYRLSGDMPVDAPPPDS 170 NG VCGS + SG PV PPP S Sbjct: 671 NGAATPSAPVCGSGSKSSGATPVSGPPPPS 700
>TLD_DROME (P25723) Dorsal-ventral patterning protein tolloid precursor (EC| 3.4.24.-) Length = 1067 Score = 29.6 bits (65), Expect = 5.9 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 2/28 (7%) Frame = +3 Query: 102 ELVCGSDYRLSGDMPVDAP--PPDSTPD 179 E+VCG D +L+ D +D+P P D PD Sbjct: 475 EVVCGGDLKLTKDQSIDSPNYPMDYMPD 502
>RPOBC_WOLPM (Q73IW9) Bifunctional DNA-directed RNA polymerase, beta and beta'| chain (EC 2.7.7.6) [Includes: DNA-directed RNA polymerase beta chain (Transcriptase beta chain) (RNA polymerase beta subunit); DNA-directed RNA polymerase beta' chain (Transcri Length = 2837 Score = 29.3 bits (64), Expect = 7.8 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = +3 Query: 75 NLNGCTNLHELVCGSDYRLSGDMPVDAPPPDS 170 N N C N LVC DY GD+ D P +S Sbjct: 780 NHNTCINQRPLVCVGDYVKKGDVIADGPAINS 811
>TRBM_BOVIN (P06579) Thrombomodulin (TM) (Fetomodulin) (CD141 antigen)| (Fragment) Length = 356 Score = 29.3 bits (64), Expect = 7.8 Identities = 12/37 (32%), Positives = 18/37 (48%) Frame = +3 Query: 51 CCTNLVNVNLNGCTNLHELVCGSDYRLSGDMPVDAPP 161 C TN+ + +E +CG D LSG + +D P Sbjct: 219 CDTNICPGQCHNLPGTYECICGPDSALSGQIGIDCDP 255
>DRL29_ARATH (Q9SZA7) Probable disease resistance protein At4g33300| Length = 832 Score = 29.3 bits (64), Expect = 7.8 Identities = 17/41 (41%), Positives = 24/41 (58%) Frame = +3 Query: 417 LANLQLLACTMLQEDELKSALSFCGALEILNVHSCPQINTL 539 L+ L + C L EL LS ALEIL +++CP++ TL Sbjct: 698 LSCLSITNCPRL--GELPKNLSKLQALEILRLYACPELKTL 736
>POF2_SCHPO (O74783) F-box/LRR-repeat protein 2 (F-box and leucine-rich repeat| protein 2) (F-box protein pof2) Length = 463 Score = 29.3 bits (64), Expect = 7.8 Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 16/116 (13%) Frame = +3 Query: 42 LLACCTNLVNVNLNGCTNLHELVCGSD-YRLSGDMPVDAPPPDSTPDNTKEIKESMDCRL 218 L+ T + +NL+GCT + E + G Y+ + ++ S P N E L Sbjct: 89 LMTLATGISRLNLSGCTRISEPLIGKLLYQNLNLVTINFSNIFSLPANILEYISDNCPNL 148 Query: 219 EVLNC--------TG-------CPNIKKVVIPSTANYLNLSKINLNLSANLKEVDL 341 + LN TG CP + +++IP+ ++S L+ +L E+D+ Sbjct: 149 KALNIGNCGLVEDTGMVQIIKRCPYLNRLIIPNCRKLTDVSLQILSEKEDLIELDI 204 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 77,070,552 Number of Sequences: 219361 Number of extensions: 1467379 Number of successful extensions: 3729 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 3562 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3727 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4488201198 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
