>YFGH_ECOLI (P65290) Hypothetical lipoprotein yfgH precursor|
          Length = 172

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = +1

Query: 439 IGSLGNIGKTFGAACSMIGGKKLGNMHDALSNTRT--DGIGALIREGAAAYLNSIVNNKF 612
           +GS  N G T GA    +GG  +G    ++ N +T  +G+    +EG   Y ++ V  + 
Sbjct: 88  VGSGSNSGTTAGA----VGGGAVGAAAGSMVNDKTLVEGVSLTYKEGTKVYTSTQVGKEC 143

Query: 613 PFTT 624
            FTT
Sbjct: 144 QFTT 147

>YFGH_ECO57 (P65291) Hypothetical lipoprotein yfgH precursor|
          Length = 172

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = +1

Query: 439 IGSLGNIGKTFGAACSMIGGKKLGNMHDALSNTRT--DGIGALIREGAAAYLNSIVNNKF 612
           +GS  N G T GA    +GG  +G    ++ N +T  +G+    +EG   Y ++ V  + 
Sbjct: 88  VGSGSNSGTTAGA----VGGGAVGAAAGSMVNDKTLVEGVSLTYKEGTKVYTSTQVGKEC 143

Query: 613 PFTT 624
            FTT
Sbjct: 144 QFTT 147

>ACDB1_METJA (Q57616) Acetyl-CoA decarbonylase/synthase complex beta subunit 1|
           (EC 2.3.1.-) (ACDS complex beta subunit 1) (ACDS complex
           acyltransferase 1)
          Length = 748

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 8/100 (8%)
 Frame = +1

Query: 400 DFWKNHPDAIIAAIGSLGNIGKTFGAACSMIGGKKLGN-----MHDALSNTRTDGI--GA 558
           D+ KN   A++ A+G L NI    GA C   G   + N     +  AL ++  D I   A
Sbjct: 224 DYLKNRVPAVVVALGELDNITLAAGAGCIKAGVPVITNNEVPVIKGALESSDIDNIVENA 283

Query: 559 LIREGAAAYLNSIVNNKFPFTTQQVKDCIR-RGRDLWIVL 675
           L  +G       +V    P +   + +  R RG D+++ L
Sbjct: 284 LKMKGVKV---KVVEFDIPVSVGPMNEGERVRGPDMYVEL 320

>PFTA_RAT (Q04631) Protein farnesyltransferase/geranylgeranyltransferase type|
           I alpha subunit (EC 2.5.1.58) (EC 2.5.1.59) (CAAX
           farnesyltransferase alpha subunit) (Ras proteins
           prenyltransferase alpha) (FTase-alpha) (Type I protein
           geranyl-geranyltransfer
          Length = 377

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 21/89 (23%), Positives = 38/89 (42%)
 Frame = +3

Query: 198 WVRRRLQPDTDTNLRYYTNADAILRHYTDAILWHYTDAILRHYTEHPKYTFP*SPCKSKE 377
           + R  LQ D  +   +    DAI  +  +  +WH+   +LR            S  K  +
Sbjct: 102 YFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLR------------SLQKDLQ 149

Query: 378 AWIHWILRLLEESPRRYNCSYWVPWQHRQ 464
             +++I+ ++EE P+ Y       W HR+
Sbjct: 150 EEMNYIIAIIEEQPKNYQV-----WHHRR 173

>SAHH_METKA (P58855) Adenosylhomocysteinase (EC 3.3.1.1)|
           (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
          Length = 424

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +3

Query: 228 DTNLRYYTNADAILRHYTDAILWHYTDAILRHYTEHP 338
           +T   YY N D +L H  D I+    D I R +TE P
Sbjct: 107 ETEEEYYQNIDRVLSHEPDIIVDDGADCIARVHTEFP 143

>GLND_AZOVI (P36223) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 899

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = +3

Query: 201 VRRRLQPDTDTNLRYYTNADAILRHYTDAILWHYTDAILRH 323
           VR    PD   +L      D  LRH +  I WH T+AIL+H
Sbjct: 644 VRSGTDPDDAEHLWTQLGDDYFLRHTSSDIAWH-TEAILQH 683

>ELTD1_MOUSE (Q923X1) EGF, latrophilin seven transmembrane domain-containing|
           protein 1 precursor
          Length = 739

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = -3

Query: 603 VHNGVEVCSCPLAYQGAN-TISSSV*EC 523
           VHNGVE C C   Y G   TI   + EC
Sbjct: 35  VHNGVEACFCSQGYSGNGVTICEDIDEC 62

>PFTA_MOUSE (Q61239) Protein farnesyltransferase/geranylgeranyltransferase type|
           I alpha subunit (EC 2.5.1.58) (EC 2.5.1.59) (CAAX
           farnesyltransferase alpha subunit) (Ras proteins
           prenyltransferase alpha) (FTase-alpha) (Type I protein
           geranyl-geranyltransf
          Length = 377

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 21/89 (23%), Positives = 37/89 (41%)
 Frame = +3

Query: 198 WVRRRLQPDTDTNLRYYTNADAILRHYTDAILWHYTDAILRHYTEHPKYTFP*SPCKSKE 377
           + R  LQ D  +   +    DAI  +  +  +WH+   +LR            S  K  +
Sbjct: 102 YFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLR------------SLQKDLQ 149

Query: 378 AWIHWILRLLEESPRRYNCSYWVPWQHRQ 464
             +++I  ++EE P+ Y       W HR+
Sbjct: 150 EEMNYITAIIEEQPKNYQV-----WHHRR 173


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.135    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,662,215
Number of Sequences: 219361
Number of extensions: 1627412
Number of successful extensions: 5004
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4995
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6712189044
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)