ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags9j22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY104452.1| Zea mays PCO122208 mRNA sequence 400 e-108
2ref|NM_197909.1| Oryza sativa (japonica cultivar-group) putative... 394 e-106
3dbj|AK103692.1| Oryza sativa (japonica cultivar-group) cDNA clon... 394 e-106
4gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 gen... 143 7e-31
5dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 143 7e-31
6gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 143 7e-31
7emb|AL355592.11| Human DNA sequence from clone RP11-349E4 on chr... 46 0.12
8emb|Z95328.1|HS447B16 Human DNA sequence from clone RP3-447B16 o... 44 0.46
9emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 44 0.46
10gb|AC004384.1|AC004384 Human Chromosome X clone bWXD531, complet... 44 0.46
11gb|AC004385.1|AC004385 Human Chromosome X clone bWXD547, complet... 44 0.46
12ref|NM_111180.2| Arabidopsis thaliana NADH dehydrogenase (ubiqui... 42 1.8
13gb|AC149402.2| Phakopsora pachyrhizi clone JGIAFNA-61H18, comple... 42 1.8
14ref|XM_387358.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 42 1.8
15gb|AC073111.8| Homo sapiens BAC clone RP11-511P7 from 7, complet... 42 1.8
16gb|AY062979.1| Arabidopsis thaliana unknown protein (At3g03100) ... 42 1.8
17gb|AF370349.1| Arabidopsis thaliana unknown protein (At3g03100) ... 42 1.8
18emb|AJ539227.1|RSP539227 Ralstonia sp. SBUG 290 bphBCD gene clus... 42 1.8
19gb|AC165066.2| Phakopsora pachyrhizi clone JGIAFNA-401O2, comple... 42 1.8
20gb|AC165051.2| Phakopsora pachyrhizi clone JGIAFNA-1077C21, comp... 42 1.8
21dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
22dbj|AB110451.1| Comamonas testosteroni bphC gene for 2,3-dihydro... 42 1.8
23gb|AY087701.1| Arabidopsis thaliana clone 37796 mRNA, complete s... 42 1.8
24dbj|AP003562.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
25gb|M26433.1|PSEBPHCD Pseudomonas sp. 2,3-dihydroxybiphenyl dioxy... 42 1.8
26gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 7.2
27ref|XM_747492.1| Aspergillus fumigatus Af293 translation elongat... 40 7.2
28gb|AC138381.10| Mus musculus chromosome 6, clone RP24-328J8, com... 40 7.2
29gb|BT010746.1| Arabidopsis thaliana At1g61690 gene, complete cds 40 7.2
30gb|AC130467.2| Homo sapiens chromosome 16 clone CTD-2015G9, comp... 40 7.2
31gb|DQ485452.1| Homo sapiens protein kinase D1 (PRKD1) gene, comp... 40 7.2
32gb|AC140032.4| Medicago truncatula clone mth2-10i23, complete se... 40 7.2
33emb|BX649605.1| Aspergillus fumigatus BAC pilot project supercon... 40 7.2
34emb|AL683874.1|AFA14E5 Aspergillus fumigatus BAC AfA14E5 40 7.2
35gb|AC023533.6| Homo sapiens chromosome 8, clone RP11-288G19, com... 40 7.2
36dbj|AK221276.1| Arabidopsis thaliana mRNA for hypothetical prote... 40 7.2
37gb|AC009154.5| Homo sapiens chromosome 16 clone RP11-58A18, comp... 40 7.2
38dbj|AB158460.1| Streptomyces halstedii hlsA, hlsB, hlsC genes fo... 40 7.2
39emb|BX465216.5| Mouse DNA sequence from clone RP23-282I18 on chr... 40 7.2
40emb|Z73898.1|CEZK822 Caenorhabditis elegans Cosmid ZK822, comple... 40 7.2
41emb|AL356756.4|CNS05TDG Human chromosome 14 DNA sequence BAC C-2... 40 7.2
42gb|AC101349.8| Mus musculus chromosome 6, clone RP23-111E12, com... 40 7.2
43emb|AL445884.4|CNS07EER Human chromosome 14 DNA sequence BAC R-4... 40 7.2
44emb|AL845309.2| Mouse DNA sequence from clone RP23-376O20 on chr... 40 7.2 
>gb|AY104452.1| Zea mays PCO122208 mRNA sequence
          Length = 921

 Score =  400 bits (202), Expect = e-108
 Identities = 406/474 (85%)
 Strand = Plus / Plus

                                                                       
Query: 4   atccatggccgcggtggttcggagcgtgtggcagggcatcaaggagaagggcctcgccaa 63
           ||||||||| |||||||| ||  |||| | |  |||||||||||||||||| ||| ||||
Sbjct: 79  atccatggcggcggtggtgcgcggcgtcttgaggggcatcaaggagaagggactcaccaa 138

                                                                       
Query: 64  cttcctccgctacgcccgcgacgagggatacctaaaatgccttggggatggaaacctatt 123
           |||| ||||| ||| ||||||||| |||||| | |||||||||  ||| || ||||| ||
Sbjct: 139 cttcatccgcgacgtccgcgacgaaggatacttcaaatgccttctggacgggaacctttt 198

                                                                       
Query: 124 gcaaaccaaaattcacaacattggtgcaacccttgtaggagttgacagttttggaaacaa 183
           |||||| ||||| ||||| ||||| ||||| ||||||||||||||||  ||||| |||||
Sbjct: 199 gcaaacgaaaatccacaatattggcgcaacacttgtaggagttgacaagtttggtaacaa 258

                                                                       
Query: 184 gtactatgagaaactacatgacactcagtatggaaggcataggtgggtagagtatgcaga 243
            || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 259 atattatgagaaactacatgacactcagtatggaaggcataggtgggtagaatatgcaga 318

                                                                       
Query: 244 gaagggtcgctacaatgcgtcccaagtgcctgctgaatggcatggatggctgcaccacat 303
           ||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gaaaggtcgttacaatgcatcccaagtgcctgctgaatggcatggatggctgcaccacat 378

                                                                       
Query: 304 tacagacagcactggggacaagctgctggaggagaagactaaaaagttcattatggagca 363
            ||||| ||||| ||||| ||||||||| |  ||||||||   | || | || | |||||
Sbjct: 379 cacagatagcaccggggataagctgctgaaccagaagactgctaggtaccttgtagagca 438

                                                                       
Query: 364 cagacagaactacactggacagggtgacgacttgatctaccactccaaggggcatgctct 423
           ||  ||||||||| | ||  ||||||| ||  | |||||||||||||||||||||||| |
Sbjct: 439 caagcagaactactccggtgagggtgaagagcttatctaccactccaaggggcatgcttt 498

                                                                 
Query: 424 gaaccctgggcaaagggactggacaaggtaccagccttgggaaccaaagaaaga 477
           ||| || || |||||||||||||| ||||| ||||| ||||| |||||||||||
Sbjct: 499 gaatccgggacaaagggactggacgaggtatcagccctgggagccaaagaaaga 552
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>ref|NM_197909.1| Oryza sativa (japonica cultivar-group) putative ubiquinone
           oxidoreductase subunit (OSJNBa0056G17.13), mRNA
          Length = 871

 Score =  394 bits (199), Expect = e-106
 Identities = 412/483 (85%)
 Strand = Plus / Plus

                                                                       
Query: 6   ccatggccgcggtggttcggagcgtgtggcagggcatcaaggagaagggcctcgccaact 65
           ||||||| |||||||| ||  |||||| | | ||||||  ||||||||||||| ||||||
Sbjct: 142 ccatggctgcggtggtgcgtggcgtgttgaacggcatccgggagaagggcctctccaact 201

                                                                       
Query: 66  tcctccgctacgcccgcgacgagggatacctaaaatgccttggggatggaaacctattgc 125
           |||||||| | ||||||||||| || ||| | |||||||||  |||||||||||| ||||
Sbjct: 202 tcctccgccatgcccgcgacgaaggctacttcaaatgccttctggatggaaacctcttgc 261

                                                                       
Query: 126 aaaccaaaattcacaacattggtgcaacccttgtaggagttgacagttttggaaacaagt 185
           |||| ||||| ||||| || || || || ||||||||||| ||||  || || ||||| |
Sbjct: 262 aaactaaaatccacaatatcggcgccacacttgtaggagtagacaagttcggcaacaaat 321

                                                                       
Query: 186 actatgagaaactacatgacactcagtatggaaggcataggtgggtagagtatgcagaga 245
           | ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 322 attatgaaaaactacatgacactcagtatggaaggcacaggtgggtagaatatgcagaga 381

                                                                       
Query: 246 agggtcgctacaatgcgtcccaagtgcctgctgaatggcatggatggctgcaccacatta 305
           | || ||||||||||| |||||||||||  |||||||||||||||||||||||||||| |
Sbjct: 382 aagggcgctacaatgcatcccaagtgccccctgaatggcatggatggctgcaccacatca 441

                                                                       
Query: 306 cagacagcactggggacaagctgctggaggagaagactaaaaagttcattatggagcaca 365
           | ||||||||||||||| |||| |||||| ||||  |||||  || |||  |||| ||||
Sbjct: 442 ccgacagcactggggacgagctactggagcagaatgctaaagcgtacatcgtggatcaca 501

                                                                       
Query: 366 gacagaactacactggacagggtgacgacttgatctaccactccaaggggcatgctctga 425
              |||||| | | ||  ||||||| ||  |||||||||||||||||||||||||||| |
Sbjct: 502 aggagaacttctccggcgagggtgaggaactgatctaccactccaaggggcatgctctaa 561

                                                                       
Query: 426 accctgggcaaagggactggacaaggtaccagccttgggaaccaaagaaagaagaggcca 485
           |||| || |||||||||||||| ||||||||||| ||||||||||||||||||||||| |
Sbjct: 562 acccaggacaaagggactggacgaggtaccagccgtgggaaccaaagaaagaagaggcaa 621

              
Query: 486 cct 488
           |||
Sbjct: 622 cct 624
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>dbj|AK103692.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136H20, full
           insert sequence
          Length = 788

 Score =  394 bits (199), Expect = e-106
 Identities = 412/483 (85%)
 Strand = Plus / Plus

                                                                       
Query: 6   ccatggccgcggtggttcggagcgtgtggcagggcatcaaggagaagggcctcgccaact 65
           ||||||| |||||||| ||  |||||| | | ||||||  ||||||||||||| ||||||
Sbjct: 62  ccatggctgcggtggtgcgtggcgtgttgaacggcatccgggagaagggcctctccaact 121

                                                                       
Query: 66  tcctccgctacgcccgcgacgagggatacctaaaatgccttggggatggaaacctattgc 125
           |||||||| | ||||||||||| || ||| | |||||||||  |||||||||||| ||||
Sbjct: 122 tcctccgccatgcccgcgacgaaggctacttcaaatgccttctggatggaaacctcttgc 181

                                                                       
Query: 126 aaaccaaaattcacaacattggtgcaacccttgtaggagttgacagttttggaaacaagt 185
           |||| ||||| ||||| || || || || ||||||||||| ||||  || || ||||| |
Sbjct: 182 aaactaaaatccacaatatcggcgccacacttgtaggagtagacaagttcggcaacaaat 241

                                                                       
Query: 186 actatgagaaactacatgacactcagtatggaaggcataggtgggtagagtatgcagaga 245
           | ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 242 attatgaaaaactacatgacactcagtatggaaggcacaggtgggtagaatatgcagaga 301

                                                                       
Query: 246 agggtcgctacaatgcgtcccaagtgcctgctgaatggcatggatggctgcaccacatta 305
           | || ||||||||||| |||||||||||  |||||||||||||||||||||||||||| |
Sbjct: 302 aagggcgctacaatgcatcccaagtgccccctgaatggcatggatggctgcaccacatca 361

                                                                       
Query: 306 cagacagcactggggacaagctgctggaggagaagactaaaaagttcattatggagcaca 365
           | ||||||||||||||| |||| |||||| ||||  |||||  || |||  |||| ||||
Sbjct: 362 ccgacagcactggggacgagctactggagcagaatgctaaagcgtacatcgtggatcaca 421

                                                                       
Query: 366 gacagaactacactggacagggtgacgacttgatctaccactccaaggggcatgctctga 425
              |||||| | | ||  ||||||| ||  |||||||||||||||||||||||||||| |
Sbjct: 422 aggagaacttctccggcgagggtgaggaactgatctaccactccaaggggcatgctctaa 481

                                                                       
Query: 426 accctgggcaaagggactggacaaggtaccagccttgggaaccaaagaaagaagaggcca 485
           |||| || |||||||||||||| ||||||||||| ||||||||||||||||||||||| |
Sbjct: 482 acccaggacaaagggactggacgaggtaccagccgtgggaaccaaagaaagaagaggcaa 541

              
Query: 486 cct 488
           |||
Sbjct: 542 cct 544
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>gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 genomic sequence, complete
             sequence
          Length = 139999

 Score =  143 bits (72), Expect = 7e-31
 Identities = 99/108 (91%)
 Strand = Plus / Minus

                                                                         
Query: 215   ggaaggcataggtgggtagagtatgcagagaagggtcgctacaatgcgtcccaagtgcct 274
             |||||||| ||||||||||| ||||||||||| || ||||||||||| ||||||||||| 
Sbjct: 36546 ggaaggcacaggtgggtagaatatgcagagaaagggcgctacaatgcatcccaagtgccc 36487

                                                             
Query: 275   gctgaatggcatggatggctgcaccacattacagacagcactggggac 322
              |||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 36486 cctgaatggcatggatggctgcaccacatcaccgacagcactggggac 36439



 Score =  137 bits (69), Expect = 4e-29
 Identities = 87/93 (93%)
 Strand = Plus / Minus

                                                                         
Query: 396   tgatctaccactccaaggggcatgctctgaaccctgggcaaagggactggacaaggtacc 455
             |||||||||||||||||||||||||||| ||||| || |||||||||||||| |||||||
Sbjct: 34993 tgatctaccactccaaggggcatgctctaaacccaggacaaagggactggacgaggtacc 34934

                                              
Query: 456   agccttgggaaccaaagaaagaagaggccacct 488
             |||| ||||||||||||||||||||||| ||||
Sbjct: 34933 agccgtgggaaccaaagaaagaagaggcaacct 34901



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 70/82 (85%)
 Strand = Plus / Minus

                                                                         
Query: 6     ccatggccgcggtggttcggagcgtgtggcagggcatcaaggagaagggcctcgccaact 65
             ||||||| |||||||| ||  |||||| | | ||||||  ||||||||||||| ||||||
Sbjct: 37488 ccatggctgcggtggtgcgtggcgtgttgaacggcatccgggagaagggcctctccaact 37429

                                   
Query: 66    tcctccgctacgcccgcgacga 87
             |||||||| | |||||||||||
Sbjct: 37428 tcctccgccatgcccgcgacga 37407



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 78/93 (83%)
 Strand = Plus / Minus

                                                                         
Query: 124   gcaaaccaaaattcacaacattggtgcaacccttgtaggagttgacagttttggaaacaa 183
             |||||| ||||| ||||| || || || || ||||||||||| ||||  || || |||||
Sbjct: 36951 gcaaactaaaatccacaatatcggcgccacacttgtaggagtagacaagttcggcaacaa 36892

                                              
Query: 184   gtactatgagaaactacatgacactcagtatgg 216
              || ||||| |||||||||||||||||||||||
Sbjct: 36891 atattatgaaaaactacatgacactcagtatgg 36859
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  143 bits (72), Expect = 7e-31
 Identities = 99/108 (91%)
 Strand = Plus / Minus

                                                                            
Query: 215      ggaaggcataggtgggtagagtatgcagagaagggtcgctacaatgcgtcccaagtgcct 274
                |||||||| ||||||||||| ||||||||||| || ||||||||||| ||||||||||| 
Sbjct: 22581877 ggaaggcacaggtgggtagaatatgcagagaaagggcgctacaatgcatcccaagtgccc 22581818

                                                                
Query: 275      gctgaatggcatggatggctgcaccacattacagacagcactggggac 322
                 |||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 22581817 cctgaatggcatggatggctgcaccacatcaccgacagcactggggac 22581770



 Score =  137 bits (69), Expect = 4e-29
 Identities = 87/93 (93%)
 Strand = Plus / Minus

                                                                            
Query: 396      tgatctaccactccaaggggcatgctctgaaccctgggcaaagggactggacaaggtacc 455
                |||||||||||||||||||||||||||| ||||| || |||||||||||||| |||||||
Sbjct: 22580324 tgatctaccactccaaggggcatgctctaaacccaggacaaagggactggacgaggtacc 22580265

                                                 
Query: 456      agccttgggaaccaaagaaagaagaggccacct 488
                |||| ||||||||||||||||||||||| ||||
Sbjct: 22580264 agccgtgggaaccaaagaaagaagaggcaacct 22580232



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 70/82 (85%)
 Strand = Plus / Minus

                                                                            
Query: 6        ccatggccgcggtggttcggagcgtgtggcagggcatcaaggagaagggcctcgccaact 65
                ||||||| |||||||| ||  |||||| | | ||||||  ||||||||||||| ||||||
Sbjct: 22582819 ccatggctgcggtggtgcgtggcgtgttgaacggcatccgggagaagggcctctccaact 22582760

                                      
Query: 66       tcctccgctacgcccgcgacga 87
                |||||||| | |||||||||||
Sbjct: 22582759 tcctccgccatgcccgcgacga 22582738



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 78/93 (83%)
 Strand = Plus / Minus

                                                                            
Query: 124      gcaaaccaaaattcacaacattggtgcaacccttgtaggagttgacagttttggaaacaa 183
                |||||| ||||| ||||| || || || || ||||||||||| ||||  || || |||||
Sbjct: 22582282 gcaaactaaaatccacaatatcggcgccacacttgtaggagtagacaagttcggcaacaa 22582223

                                                 
Query: 184      gtactatgagaaactacatgacactcagtatgg 216
                 || ||||| |||||||||||||||||||||||
Sbjct: 22582222 atattatgaaaaactacatgacactcagtatgg 22582190
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  143 bits (72), Expect = 7e-31
 Identities = 99/108 (91%)
 Strand = Plus / Minus

                                                                            
Query: 215      ggaaggcataggtgggtagagtatgcagagaagggtcgctacaatgcgtcccaagtgcct 274
                |||||||| ||||||||||| ||||||||||| || ||||||||||| ||||||||||| 
Sbjct: 22594345 ggaaggcacaggtgggtagaatatgcagagaaagggcgctacaatgcatcccaagtgccc 22594286

                                                                
Query: 275      gctgaatggcatggatggctgcaccacattacagacagcactggggac 322
                 |||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 22594285 cctgaatggcatggatggctgcaccacatcaccgacagcactggggac 22594238



 Score =  137 bits (69), Expect = 4e-29
 Identities = 87/93 (93%)
 Strand = Plus / Minus

                                                                            
Query: 396      tgatctaccactccaaggggcatgctctgaaccctgggcaaagggactggacaaggtacc 455
                |||||||||||||||||||||||||||| ||||| || |||||||||||||| |||||||
Sbjct: 22592792 tgatctaccactccaaggggcatgctctaaacccaggacaaagggactggacgaggtacc 22592733

                                                 
Query: 456      agccttgggaaccaaagaaagaagaggccacct 488
                |||| ||||||||||||||||||||||| ||||
Sbjct: 22592732 agccgtgggaaccaaagaaagaagaggcaacct 22592700



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 70/82 (85%)
 Strand = Plus / Minus

                                                                            
Query: 6        ccatggccgcggtggttcggagcgtgtggcagggcatcaaggagaagggcctcgccaact 65
                ||||||| |||||||| ||  |||||| | | ||||||  ||||||||||||| ||||||
Sbjct: 22595287 ccatggctgcggtggtgcgtggcgtgttgaacggcatccgggagaagggcctctccaact 22595228

                                      
Query: 66       tcctccgctacgcccgcgacga 87
                |||||||| | |||||||||||
Sbjct: 22595227 tcctccgccatgcccgcgacga 22595206



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 78/93 (83%)
 Strand = Plus / Minus

                                                                            
Query: 124      gcaaaccaaaattcacaacattggtgcaacccttgtaggagttgacagttttggaaacaa 183
                |||||| ||||| ||||| || || || || ||||||||||| ||||  || || |||||
Sbjct: 22594750 gcaaactaaaatccacaatatcggcgccacacttgtaggagtagacaagttcggcaacaa 22594691

                                                 
Query: 184      gtactatgagaaactacatgacactcagtatgg 216
                 || ||||| |||||||||||||||||||||||
Sbjct: 22594690 atattatgaaaaactacatgacactcagtatgg 22594658
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>emb|AL355592.11| Human DNA sequence from clone RP11-349E4 on chromosome 9 Contains a novel
              gene and a CpG island, complete sequence
          Length = 172445

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 458    ccttgggaaccaaagaaagaaga 480
              |||||||||||||||||||||||
Sbjct: 119778 ccttgggaaccaaagaaagaaga 119800
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>emb|Z95328.1|HS447B16 Human DNA sequence from clone RP3-447B16 on chromosome Xq13.1-13.3,
             complete sequence
          Length = 93250

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 185   tactatgagaaactacatgaca 206
             ||||||||||||||||||||||
Sbjct: 52885 tactatgagaaactacatgaca 52906
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 143     attggtgcaacccttgtaggag 164
               ||||||||||||||||||||||
Sbjct: 4780049 attggtgcaacccttgtaggag 4780070
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>gb|AC004384.1|AC004384 Human Chromosome X clone bWXD531, complete sequence
          Length = 164675

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 185   tactatgagaaactacatgaca 206
             ||||||||||||||||||||||
Sbjct: 70172 tactatgagaaactacatgaca 70151
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>gb|AC004385.1|AC004385 Human Chromosome X clone bWXD547, complete sequence
          Length = 177311

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 185  tactatgagaaactacatgaca 206
            ||||||||||||||||||||||
Sbjct: 7105 tactatgagaaactacatgaca 7126
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>ref|NM_111180.2| Arabidopsis thaliana NADH dehydrogenase (ubiquinone)/ electron
           transporter/ oxidoreductase AT3G03100 transcript variant
           AT3G03100.1 mRNA, complete cds
          Length = 709

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 144/185 (77%)
 Strand = Plus / Plus

                                                                       
Query: 110 gatggaaacctattgcaaaccaaaattcacaacattggtgcaacccttgtaggagttgac 169
           ||||| ||||| |||||||| ||||| || ||||| || || || ||||| || ||||||
Sbjct: 155 gatgggaacctcttgcaaactaaaatacataacataggagcgacacttgttggtgttgac 214

                                                                       
Query: 170 agttttggaaacaagtactatgagaaactacatgacactcagtatggaaggcataggtgg 229
           |  || || ||||| |||||  |||| |||   || ||||| || || ||||| || |||
Sbjct: 215 aagttcggtaacaaatactaccagaagctaggcgatactcaatacggtaggcacagatgg 274

                                                                       
Query: 230 gtagagtatgcagagaagggtcgctacaatgcgtcccaagtgcctgctgaatggcatgga 289
           |||||||||||    |||| ||| ||||| || || ||||| || ||||||||||| || 
Sbjct: 275 gtagagtatgcttcaaaggatcgttacaacgcatctcaagtaccagctgaatggcacggg 334

                
Query: 290 tggct 294
           |||||
Sbjct: 335 tggct 339
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>gb|AC149402.2| Phakopsora pachyrhizi clone JGIAFNA-61H18, complete sequence
          Length = 37448

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 420   ctctgaaccctgggcaaaggg 440
             |||||||||||||||||||||
Sbjct: 24453 ctctgaaccctgggcaaaggg 24473
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>ref|XM_387358.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07182.1)
           partial mRNA
          Length = 1338

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 50  aagggcctcgccaacttcctc 70
           |||||||||||||||||||||
Sbjct: 244 aagggcctcgccaacttcctc 264
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>gb|AC073111.8| Homo sapiens BAC clone RP11-511P7 from 7, complete sequence
          Length = 115003

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 470   aagaaagaagaggccacctga 490
             |||||||||||||||||||||
Sbjct: 64282 aagaaagaagaggccacctga 64262
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>gb|AY062979.1| Arabidopsis thaliana unknown protein (At3g03100) mRNA, complete cds
          Length = 511

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 144/185 (77%)
 Strand = Plus / Plus

                                                                       
Query: 110 gatggaaacctattgcaaaccaaaattcacaacattggtgcaacccttgtaggagttgac 169
           ||||| ||||| |||||||| ||||| || ||||| || || || ||||| || ||||||
Sbjct: 106 gatgggaacctcttgcaaactaaaatacataacataggagcgacacttgttggtgttgac 165

                                                                       
Query: 170 agttttggaaacaagtactatgagaaactacatgacactcagtatggaaggcataggtgg 229
           |  || || ||||| |||||  |||| |||   || ||||| || || ||||| || |||
Sbjct: 166 aagttcggtaacaaatactaccagaagctaggcgatactcaatacggtaggcacagatgg 225

                                                                       
Query: 230 gtagagtatgcagagaagggtcgctacaatgcgtcccaagtgcctgctgaatggcatgga 289
           |||||||||||    |||| ||| ||||| || || ||||| || ||||||||||| || 
Sbjct: 226 gtagagtatgcttcaaaggatcgttacaacgcatctcaagtaccagctgaatggcacggg 285

                
Query: 290 tggct 294
           |||||
Sbjct: 286 tggct 290
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>gb|AF370349.1| Arabidopsis thaliana unknown protein (At3g03100) mRNA, complete cds
          Length = 720

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 144/185 (77%)
 Strand = Plus / Plus

                                                                       
Query: 110 gatggaaacctattgcaaaccaaaattcacaacattggtgcaacccttgtaggagttgac 169
           ||||| ||||| |||||||| ||||| || ||||| || || || ||||| || ||||||
Sbjct: 147 gatgggaacctcttgcaaactaaaatacataacataggagcgacacttgttggtgttgac 206

                                                                       
Query: 170 agttttggaaacaagtactatgagaaactacatgacactcagtatggaaggcataggtgg 229
           |  || || ||||| |||||  |||| |||   || ||||| || || ||||| || |||
Sbjct: 207 aagttcggtaacaaatactaccagaagctaggcgatactcaatacggtaggcacagatgg 266

                                                                       
Query: 230 gtagagtatgcagagaagggtcgctacaatgcgtcccaagtgcctgctgaatggcatgga 289
           |||||||||||    |||| ||| ||||| || || ||||| || ||||||||||| || 
Sbjct: 267 gtagagtatgcttcaaaggatcgttacaacgcatctcaagtaccagctgaatggcacggg 326

                
Query: 290 tggct 294
           |||||
Sbjct: 327 tggct 331
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>emb|AJ539227.1|RSP539227 Ralstonia sp. SBUG 290 bphBCD gene cluster (bphB, bphC, bphD) and
            flanking ORF1
          Length = 3252

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 40   catcaaggagaagggcctcgccaacttcc 68
            |||||| |||||||||||| |||||||||
Sbjct: 1854 catcaacgagaagggcctctccaacttcc 1882
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>gb|AC165066.2| Phakopsora pachyrhizi clone JGIAFNA-401O2, complete sequence
          Length = 39855

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 420   ctctgaaccctgggcaaaggg 440
             |||||||||||||||||||||
Sbjct: 35304 ctctgaaccctgggcaaaggg 35284
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>gb|AC165051.2| Phakopsora pachyrhizi clone JGIAFNA-1077C21, complete sequence
          Length = 35591

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 420  ctctgaaccctgggcaaaggg 440
            |||||||||||||||||||||
Sbjct: 1829 ctctgaaccctgggcaaaggg 1849
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 456      agccttgggaaccaaagaaagaaga 480
                |||||| ||||||||||||||||||
Sbjct: 18352990 agccttaggaaccaaagaaagaaga 18353014
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>dbj|AB110451.1| Comamonas testosteroni bphC gene for 2,3-dihydroxybiphenyl
            1,2-dioxygenase, partial cds, strain: KF704
          Length = 1170

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 40   catcaaggagaagggcctcgccaacttcc 68
            |||||| |||||||||||| |||||||||
Sbjct: 1107 catcaacgagaagggcctctccaacttcc 1135
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>gb|AY087701.1| Arabidopsis thaliana clone 37796 mRNA, complete sequence
          Length = 702

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 144/185 (77%)
 Strand = Plus / Plus

                                                                       
Query: 110 gatggaaacctattgcaaaccaaaattcacaacattggtgcaacccttgtaggagttgac 169
           ||||| ||||| |||||||| ||||| || ||||| || || || ||||| || ||||||
Sbjct: 148 gatgggaacctcttgcaaactaaaatacataacataggagcgacacttgttggtgttgac 207

                                                                       
Query: 170 agttttggaaacaagtactatgagaaactacatgacactcagtatggaaggcataggtgg 229
           |  || || ||||| |||||  |||| |||   || ||||| || || ||||| || |||
Sbjct: 208 aagttcggtaacaaatactaccagaagctaggcgatactcaatacggtaggcacagatgg 267

                                                                       
Query: 230 gtagagtatgcagagaagggtcgctacaatgcgtcccaagtgcctgctgaatggcatgga 289
           |||||||||||    |||| ||| ||||| || || ||||| || ||||||||||| || 
Sbjct: 268 gtagagtatgcttcaaaggatcgttacaacgcatctcaagtaccagctgaatggcacggg 327

                
Query: 290 tggct 294
           |||||
Sbjct: 328 tggct 332
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>dbj|AP003562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1108H10
          Length = 136357

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 456    agccttgggaaccaaagaaagaaga 480
              |||||| ||||||||||||||||||
Sbjct: 110324 agccttaggaaccaaagaaagaaga 110348
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>gb|M26433.1|PSEBPHCD Pseudomonas sp. 2,3-dihydroxybiphenyl dioxygenase (bphC) and
            2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase
            (bphD) genes, complete cds
          Length = 2124

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 40   catcaaggagaagggcctcgccaacttcc 68
            |||||| |||||||||||| |||||||||
Sbjct: 1176 catcaacgagaagggcctctccaacttcc 1204
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>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete
              sequence
          Length = 1347793

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 510    gataatcatcctcttctatg 529
              ||||||||||||||||||||
Sbjct: 611512 gataatcatcctcttctatg 611493
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>ref|XM_747492.1| Aspergillus fumigatus Af293 translation elongation factor EF-Tu
           (Afu1g12170) partial mRNA
          Length = 1323

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 46  ggagaagggcctcgccaacttcct 69
           |||||||||||| |||||||||||
Sbjct: 231 ggagaagggccttgccaacttcct 254
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>gb|AC138381.10| Mus musculus chromosome 6, clone RP24-328J8, complete sequence
          Length = 130895

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   tattgcaaaccaaaattcac 139
             ||||||||||||||||||||
Sbjct: 12549 tattgcaaaccaaaattcac 12568
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>gb|BT010746.1| Arabidopsis thaliana At1g61690 gene, complete cds
          Length = 3516

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 464  gaaccaaagaaagaagaggc 483
            ||||||||||||||||||||
Sbjct: 2185 gaaccaaagaaagaagaggc 2204
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>gb|AC130467.2| Homo sapiens chromosome 16 clone CTD-2015G9, complete sequence
          Length = 117601

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 459    cttgggaaccaaagaaagaa 478
              ||||||||||||||||||||
Sbjct: 101775 cttgggaaccaaagaaagaa 101794
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>gb|DQ485452.1| Homo sapiens protein kinase D1 (PRKD1) gene, complete cds
          Length = 355200

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 354    ttatggagcacagacagaac 373
              ||||||||||||||||||||
Sbjct: 120425 ttatggagcacagacagaac 120406
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>gb|AC140032.4| Medicago truncatula clone mth2-10i23, complete sequence
          Length = 124302

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 463   ggaaccaaagaaagaagagg 482
             ||||||||||||||||||||
Sbjct: 56802 ggaaccaaagaaagaagagg 56783
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>emb|BX649605.1| Aspergillus fumigatus BAC pilot project supercontig; segment 1/3
          Length = 345637

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 46     ggagaagggcctcgccaacttcct 69
              |||||||||||| |||||||||||
Sbjct: 258656 ggagaagggccttgccaacttcct 258679
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>emb|AL683874.1|AFA14E5 Aspergillus fumigatus BAC  AfA14E5
          Length = 68100

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 46   ggagaagggcctcgccaacttcct 69
            |||||||||||| |||||||||||
Sbjct: 7220 ggagaagggccttgccaacttcct 7243
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>gb|AC023533.6| Homo sapiens chromosome 8, clone RP11-288G19, complete sequence
          Length = 193083

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    ctattgcaaaccaaaattca 138
              ||||||||||||||||||||
Sbjct: 120811 ctattgcaaaccaaaattca 120792
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>dbj|AK221276.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
            clone: RAFL24-18-B08
          Length = 3821

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 464  gaaccaaagaaagaagaggc 483
            ||||||||||||||||||||
Sbjct: 2262 gaaccaaagaaagaagaggc 2281
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>gb|AC009154.5| Homo sapiens chromosome 16 clone RP11-58A18, complete sequence
          Length = 181914

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 459   cttgggaaccaaagaaagaa 478
             ||||||||||||||||||||
Sbjct: 99322 cttgggaaccaaagaaagaa 99303
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>dbj|AB158460.1| Streptomyces halstedii hlsA, hlsB, hlsC genes for type I polyketide
            synthase, type I polyketide synthase, type I polyketide
            synthase, complete and partial cds
          Length = 45102

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 207  ctcagtatggaaggcataggtggg 230
            |||||| |||||||||||||||||
Sbjct: 6681 ctcagtttggaaggcataggtggg 6658
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>emb|BX465216.5| Mouse DNA sequence from clone RP23-282I18 on chromosome 4, complete
             sequence
          Length = 97410

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 290   tggctgcaccacattacaga 309
             ||||||||||||||||||||
Sbjct: 21264 tggctgcaccacattacaga 21283
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>emb|Z73898.1|CEZK822 Caenorhabditis elegans Cosmid ZK822, complete sequence
          Length = 25970

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   aaaccaaaattcacaacatt 145
             ||||||||||||||||||||
Sbjct: 22696 aaaccaaaattcacaacatt 22715
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>emb|AL356756.4|CNS05TDG Human chromosome 14 DNA sequence BAC C-2503I6 of library CalTech-D
            from chromosome 14 of Homo sapiens (Human), complete
            sequence
          Length = 191965

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 354  ttatggagcacagacagaac 373
            ||||||||||||||||||||
Sbjct: 7633 ttatggagcacagacagaac 7614
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>gb|AC101349.8| Mus musculus chromosome 6, clone RP23-111E12, complete sequence
          Length = 196303

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   tattgcaaaccaaaattcac 139
             ||||||||||||||||||||
Sbjct: 33645 tattgcaaaccaaaattcac 33626
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>emb|AL445884.4|CNS07EER Human chromosome 14 DNA sequence BAC R-419C10 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 146828

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   ttatggagcacagacagaac 373
             ||||||||||||||||||||
Sbjct: 54953 ttatggagcacagacagaac 54934
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>emb|AL845309.2| Mouse DNA sequence from clone RP23-376O20 on chromosome 2, complete
              sequence
          Length = 194490

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 367    acagaactacactggacagg 386
              ||||||||||||||||||||
Sbjct: 100783 acagaactacactggacagg 100764


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,828,996
Number of Sequences: 3902068
Number of extensions: 4828996
Number of successful extensions: 94442
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 94243
Number of HSP's gapped (non-prelim): 199
length of query: 533
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 510
effective length of database: 17,143,297,704
effective search space: 8743081829040
effective search space used: 8743081829040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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