ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags9j19 |
|---|---|
| Clone Library Name | barley_pub |
>Y2766_ARATH (O80934) Protein At2g37660, chloroplast precursor| Length = 325 Score = 335 bits (859), Expect = 6e-92 Identities = 157/192 (81%), Positives = 180/192 (93%) Frame = +1 Query: 31 SIAPAIDGIDALIILTSGVPKMKPGFDPSKGGRPEFYFEEGSDPEQVDWIGQKNQIDAAK 210 SIAPA++GIDAL+ILTS VP+MKPGFDPSKGGRPEF+F++G+ PEQVDWIGQKNQIDAAK Sbjct: 134 SIAPAVEGIDALVILTSAVPQMKPGFDPSKGGRPEFFFDDGAYPEQVDWIGQKNQIDAAK 193 Query: 211 SIGVKQIVLVGSMGGTDINHPLNKLGNGNILVWKRKAEQYLADSGVPYTIIRAGGLQDKD 390 + GVKQIVLVGSMGGT+INHPLN +GN NILVWKRKAEQYLADSG+PYTIIRAGGLQDKD Sbjct: 194 AAGVKQIVLVGSMGGTNINHPLNSIGNANILVWKRKAEQYLADSGIPYTIIRAGGLQDKD 253 Query: 391 GGVRELIVGKDDEILKTETKTVARADVAEVCIQALLFEEAKFKAFDLASKPEGEGTPTTD 570 GG+REL+VGKDDE+L+TET+T+ARADVAEVC+QAL EEAKFKA DLASKPEG GTPT D Sbjct: 254 GGIRELLVGKDDELLETETRTIARADVAEVCVQALQLEEAKFKALDLASKPEGTGTPTKD 313 Query: 571 FKSVFAQIATRF 606 FK++F Q+ T+F Sbjct: 314 FKALFTQVTTKF 325
>Y5224_ARATH (Q94EG6) Protein At5g02240| Length = 253 Score = 320 bits (820), Expect = 2e-87 Identities = 156/192 (81%), Positives = 172/192 (89%) Frame = +1 Query: 31 SIAPAIDGIDALIILTSGVPKMKPGFDPSKGGRPEFYFEEGSDPEQVDWIGQKNQIDAAK 210 SI PA GIDAL+ILTS VPKMKPGFDP+KGGRPEF FE+G PEQVDWIGQKNQIDAAK Sbjct: 62 SINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAK 121 Query: 211 SIGVKQIVLVGSMGGTDINHPLNKLGNGNILVWKRKAEQYLADSGVPYTIIRAGGLQDKD 390 GVK IV+VGSMGGT+ +HPLNKLGNGNILVWKRKAEQYLADSG PYTIIRAGGL DK+ Sbjct: 122 VAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKE 181 Query: 391 GGVRELIVGKDDEILKTETKTVARADVAEVCIQALLFEEAKFKAFDLASKPEGEGTPTTD 570 GGVREL+VGKDDE+L+T+TKTV RADVAEVCIQALLFEEAK KAFDL SKPEG TPT D Sbjct: 182 GGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKD 241 Query: 571 FKSVFAQIATRF 606 FK++F+Q+ +RF Sbjct: 242 FKALFSQVTSRF 253
>YCF39_ODOSI (P49534) Hypothetical 36.3 kDa protein ycf39 (ORF319)| Length = 319 Score = 43.1 bits (100), Expect = 6e-04 Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 5/131 (3%) Frame = +1 Query: 163 EQVDWIGQKNQIDAAKSIGVKQIVLVGSMGGTD-INHPLNKLGNGNILVWKRKAEQYLAD 339 +QVDW G+ I+AA++ VK V S +N PL ++ G E L Sbjct: 83 KQVDWDGKCALIEAAQAANVKHFVFCSSQNVEQFLNIPLMEMKFG--------IETKLQQ 134 Query: 340 SGVPYTIIRAGGLQDKDGGVRELIVGKDDEILKTETKT----VARADVAEVCIQALLFEE 507 S +PYT+ R G + V ++ IL T T + D+A+ C+++L E Sbjct: 135 SNIPYTVFRLAGFYQGLIEQYAIPVLENLPILVTNENTCVSYMDTQDIAKFCLRSLQLPE 194 Query: 508 AKFKAFDLASK 540 K + F L + Sbjct: 195 TKNRTFVLGGQ 205
>YCF39_CYAPA (P48279) Hypothetical 36.4 kDa protein ycf39| Length = 321 Score = 40.0 bits (92), Expect = 0.005 Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 5/172 (2%) Frame = +1 Query: 31 SIAPAIDGIDALIILTSGVPKMKPGFDPSKGGRPEFYFEEGSDPEQVDWIGQKNQIDAAK 210 S+ PA+ GI +I ++ P G QVD G+K IDAAK Sbjct: 57 SLLPALTGIRVIIDTSTSRPTDPAGV------------------YQVDLKGKKALIDAAK 98 Query: 211 SIGVKQIVLVGSMGGTDINH-PLNKLGNGNILVWKRKAEQYLADSGVPYTIIR-AGGLQD 384 ++ +++ + + + PL ++ K E+ L +SG+ YTI + G Q Sbjct: 99 AMKIEKFIFFSILNSEKYSQVPLMRI--------KTVTEELLKESGLNYTIFKLCGFFQG 150 Query: 385 KDGGVRELIVGKDDEILKTETKTVA---RADVAEVCIQALLFEEAKFKAFDL 531 G I+ + + TE+ ++A D+A +++L+ +E + F L Sbjct: 151 LIGQYAVPILDQQTVWITTESTSIAYMDTIDIARFTLRSLVLKETNNRVFPL 202
>TOLB_ERWCT (Q6D7F2) Protein tolB precursor| Length = 430 Score = 33.5 bits (75), Expect = 0.50 Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 2/78 (2%) Frame = +1 Query: 28 GSIAPAIDGIDALIILTSGVPKMKPGFDPSKGGRPEFYF--EEGSDPEQVDWIGQKNQID 201 G I+P DG T + + GRP+ Y G P++V W G +NQ D Sbjct: 278 GQISPVTDGRSNNTEPTWFPDSQTLAYTSDQAGRPQVYKVNANGGAPQRVTWEGSQNQ-D 336 Query: 202 AAKSIGVKQIVLVGSMGG 255 + S K +V V S GG Sbjct: 337 SDVSADGKFLVTVSSNGG 354
>TOLB_ECOLI (P0A855) Protein tolB precursor| Length = 430 Score = 33.1 bits (74), Expect = 0.66 Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Frame = +1 Query: 106 FDPSKGGRPEFYFEE--GSDPEQVDWIGQKNQIDAAKSIGVKQIVLVGSMGG 255 F + GRP+ Y G P+++ W G +NQ DA S K +V+V S GG Sbjct: 304 FTSDQAGRPQVYKVNINGGAPQRITWEGSQNQ-DADVSSDGKFMVMVSSNGG 354
>TOLB_ECOL6 (P0A856) Protein tolB precursor| Length = 430 Score = 33.1 bits (74), Expect = 0.66 Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Frame = +1 Query: 106 FDPSKGGRPEFYFEE--GSDPEQVDWIGQKNQIDAAKSIGVKQIVLVGSMGG 255 F + GRP+ Y G P+++ W G +NQ DA S K +V+V S GG Sbjct: 304 FTSDQAGRPQVYKVNINGGAPQRITWEGSQNQ-DADVSSDGKFMVMVSSNGG 354
>TOLB_ECO57 (P0A857) Protein tolB precursor| Length = 430 Score = 33.1 bits (74), Expect = 0.66 Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Frame = +1 Query: 106 FDPSKGGRPEFYFEE--GSDPEQVDWIGQKNQIDAAKSIGVKQIVLVGSMGG 255 F + GRP+ Y G P+++ W G +NQ DA S K +V+V S GG Sbjct: 304 FTSDQAGRPQVYKVNINGGAPQRITWEGSQNQ-DADVSSDGKFMVMVSSNGG 354
>TOLB_YERPS (Q66D90) Protein tolB precursor| Length = 430 Score = 32.7 bits (73), Expect = 0.86 Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Frame = +1 Query: 106 FDPSKGGRPEFYFEE--GSDPEQVDWIGQKNQIDAAKSIGVKQIVLVGSMGG 255 + +GGRP+ Y G P+++ W G +NQ +A S K +VLV S GG Sbjct: 304 YTSDQGGRPQVYKVNINGGVPQRITWEGSQNQ-NADVSPDGKFLVLVSSNGG 354
>TOLB_YERPE (Q8ZGZ1) Protein tolB precursor| Length = 430 Score = 32.7 bits (73), Expect = 0.86 Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Frame = +1 Query: 106 FDPSKGGRPEFYFEE--GSDPEQVDWIGQKNQIDAAKSIGVKQIVLVGSMGG 255 + +GGRP+ Y G P+++ W G +NQ +A S K +VLV S GG Sbjct: 304 YTSDQGGRPQVYKVNINGGVPQRITWEGSQNQ-NADVSPDGKFLVLVSSNGG 354
>YCF39_GUITH (O78472) Hypothetical 35.9 kDa protein ycf39| Length = 314 Score = 32.3 bits (72), Expect = 1.1 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 4/78 (5%) Frame = +1 Query: 154 SDP---EQVDWIGQKNQIDAAKSIGVKQIVLVGSMGGTDINH-PLNKLGNGNILVWKRKA 321 SDP E++D G+ ++AAK G+K+ V + + H PL L K + Sbjct: 77 SDPYKAEKIDLEGKIALVEAAKVAGIKRFVFFSVLNAQNYRHLPLVNL--------KCRM 128 Query: 322 EQYLADSGVPYTIIRAGG 375 E+YL S + YT + G Sbjct: 129 EEYLQTSELEYTTFQLSG 146
>TOLB_SHIFL (Q83MM7) Protein tolB precursor| Length = 430 Score = 32.0 bits (71), Expect = 1.5 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Frame = +1 Query: 106 FDPSKGGRPEFYFEE--GSDPEQVDWIGQKNQIDAAKSIGVKQIVLVGSMGG 255 F GRP+ Y G P+++ W G +NQ DA S K +V+V S GG Sbjct: 304 FTSDLAGRPQVYKVNINGGAPQRITWEGSQNQ-DADVSSDGKFMVMVSSNGG 354
>YTFG_ECOLI (P39315) Hypothetical protein ytfG| Length = 286 Score = 31.6 bits (70), Expect = 1.9 Identities = 31/118 (26%), Positives = 52/118 (44%) Frame = +1 Query: 19 GIQGSIAPAIDGIDALIILTSGVPKMKPGFDPSKGGRPEFYFEEGSDPEQVDWIGQKNQI 198 G + ++ A+ G++ L++++S E G Q +N I Sbjct: 54 GDEAALTSALQGVEKLLLISSS--------------------EVGQRAPQ-----HRNVI 88 Query: 199 DAAKSIGVKQIVLVGSMGGTDINHPLNKLGNGNILVWKRKAEQYLADSGVPYTIIRAG 372 +AAK+ GVK I + PL L + +I + E+ LADSG+ YT++R G Sbjct: 89 NAAKAAGVKFIAYTSLLHAD--TSPLG-LADEHI-----ETEKMLADSGIVYTLLRNG 138
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 31.2 bits (69), Expect = 2.5 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = +3 Query: 192 PNRCCQEHWCKADSFGWIHGRNRYQPST 275 P RCC +WC++ +HG YQP + Sbjct: 4911 PGRCCPFYWCESKGV-CVHGNAEYQPGS 4937
>COX3_ELEMA (Q2I3G8) Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide III) Length = 261 Score = 31.2 bits (69), Expect = 2.5 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Frame = -1 Query: 311 FHTSIFPFPSLFSGW-LISVPPMDPTKT-ICFTPMLLAASIWFFWPIQSTCSGS 156 +H+S+ P P L S W + V P++P + + T +LLA+ + W S GS Sbjct: 102 YHSSLAPTPELGSYWPPVGVYPLNPLEVPLLNTSVLLASGVTITWAHHSLMEGS 155
>NKX61_HUMAN (P78426) Homeobox protein Nkx-6.1| Length = 367 Score = 31.2 bits (69), Expect = 2.5 Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 3/112 (2%) Frame = -1 Query: 551 SPSGFEARSNALNFASSNSKACMQTSATSALATXXXXXXXXXXXFPTINSRTPPSLSCSP 372 SPSG + S++ ASS S A +A +A A P +S +PP P Sbjct: 119 SPSGSSSSSSSSASASSASAA---AAAAAAAAAAASSPAGLLAGLPRFSSLSPPP---PP 172 Query: 371 PALIIVYGTPESARYCSAFRFHTSIFPFPS---LFSGWLISVPPMDPTKTIC 225 P L Y +P +A + R+ + P +F ++ PP + C Sbjct: 173 PGL---YFSPSAAAVAAVGRYPKPLAELPGRTPIFWPGVMQSPPWRDARLAC 221
>IFEA_HELAS (P22488) Non-neuronal cytoplasmic intermediate filament protein| (IF) Length = 575 Score = 30.8 bits (68), Expect = 3.3 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Frame = +1 Query: 361 IRAGGLQDKDGGVRELI--VGKDDEILKTETKTVARADVAEVCIQALLFEEAKF 516 IR G L+D++ VREL+ + + + L+ + T A + C+ EEA+F Sbjct: 194 IRCGSLEDENAKVRELLDKIQEQNRRLRADLDTETAAHIEADCLAQTKTEEAEF 247
>DNAE2_GLUOX (Q5HXU1) Error-prone DNA polymerase (EC 2.7.7.7)| Length = 901 Score = 30.8 bits (68), Expect = 3.3 Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 4/104 (3%) Frame = +1 Query: 115 SKGGRPEFYFEEGSDPEQVDWIGQKNQIDAAKSIGVKQIVLV----GSMGGTDINHPLNK 282 S G P + EG E + G + + I + +VL+ G+ GT ++ Sbjct: 777 SLNGHPVAFLREGLRKEGIVRCGDLPYLRDGRRIQLTGLVLMRQRPGTANGTMFVTIEDE 836 Query: 283 LGNGNILVWKRKAEQYLADSGVPYTIIRAGGLQDKDGGVRELIV 414 G N++VWK E+Y + G LQ K+G V ++V Sbjct: 837 TGTANLIVWKDVQEKYRRPLLASRLLACKGRLQ-KEGDVIHVVV 879
>END4_OCEIH (Q8EPZ2) Probable endonuclease 4 (EC 3.1.21.2) (Endonuclease IV)| (Endodeoxyribonuclease IV) Length = 297 Score = 30.8 bits (68), Expect = 3.3 Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 3/88 (3%) Frame = +1 Query: 187 KNQIDAAKSIGVKQIVLVGSMGGTDINHPLNKLGNGNILVWKRKAEQYLADSGVPYTIIR 366 KN+ID +++G KQIVL HP +G G A+ G+P I Sbjct: 93 KNEIDRTEALGAKQIVL----------HPGAHVGEG-------------AEKGIPKIIEG 129 Query: 367 AGGLQDKDGGVR---ELIVGKDDEILKT 441 + D + V+ E + GK EI +T Sbjct: 130 LNEVLDPNSNVQIALETMAGKGSEIGRT 157
>GBF_DICDI (P36417) G-box-binding factor (GBF)| Length = 708 Score = 30.4 bits (67), Expect = 4.2 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 4/54 (7%) Frame = +3 Query: 249 GRNRYQPSTKQAWEWEYTG----VETEGRAVPSGLWCTIHNYKSWRTTRQRWWC 398 G N PSTK + T ++ G+ +P C + SW+ ++RWWC Sbjct: 308 GSNTPSPSTKGKRKHHETSNSEKKDSSGQTIPKCTRC--NEAASWKHDKRRWWC 359
>CYSA_ACIAD (Q6F9A8) Sulfate/thiosulfate import ATP-binding protein cysA (EC| 3.6.3.25) (Sulfate-transporting ATPase) Length = 353 Score = 30.4 bits (67), Expect = 4.2 Identities = 29/145 (20%), Positives = 63/145 (43%), Gaps = 17/145 (11%) Frame = +1 Query: 43 AIDGIDALIILTSGVPKMKPGFDPSKGGRPEFYFEEGSDPEQVDWIGQKNQIDA-----A 207 A++ D +I++ G + + G P +E+ + P D++GQ N+ D Sbjct: 200 ALEVADQIIVMNKG--------NVEQIGSPREVYEKPATPFVFDFLGQANRFDGQYHENK 251 Query: 208 KSIGVKQIVLVGSMGGTDINHPLNKLGNGNILVWKRKAEQYL----ADSGVPYTIIR--- 366 +G QI+L ++++ +G ++ + R E ++ D+ + T +R Sbjct: 252 VELGEDQIILPN----------VSEVPHGKVIAFARPDELHIHAQPQDNTIQATFLREVW 301 Query: 367 -----AGGLQDKDGGVRELIVGKDD 426 LQD++G + E+ + D+ Sbjct: 302 IAGKVVAELQDRNGRLIEIALSPDE 326
>COX3_MAMPR (Q38PR6) Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide III) Length = 261 Score = 30.0 bits (66), Expect = 5.6 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Frame = -1 Query: 311 FHTSIFPFPSLFSGW-LISVPPMDPTKT-ICFTPMLLAASIWFFWPIQSTCSGS 156 +H+S+ P P L S W + V P++P + + T +LLA+ + W S G+ Sbjct: 102 YHSSLAPTPELGSYWPPVGVYPLNPLEVPLLNTSVLLASGVTITWAHHSLMEGN 155
>COX3_LOXAF (Q2I3F5) Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide III) Length = 261 Score = 30.0 bits (66), Expect = 5.6 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Frame = -1 Query: 311 FHTSIFPFPSLFSGW-LISVPPMDPTKT-ICFTPMLLAASIWFFWPIQSTCSGS 156 +H+S+ P P L S W + V P++P + + T +LLA+ + W S G+ Sbjct: 102 YHSSLAPTPELGSYWPPVGVYPLNPLEVPLLNTSVLLASGVTITWAHHSLMEGN 155
>IFN_ANAPL (P51526) Interferon precursor| Length = 191 Score = 29.6 bits (65), Expect = 7.2 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = -1 Query: 404 SRTPPSLSCSPPALIIVYGTPESARYCSAFRFHTSIFPFPSL 279 S PP S AL+++ P +A CS R H S F + SL Sbjct: 5 SAPPPPAIYSALALLLLLTPPANAFSCSPLRLHDSAFAWDSL 46
>TNIK_HUMAN (Q9UKE5) TRAF2 and NCK-interacting kinase (EC 2.7.11.1)| Length = 1360 Score = 29.6 bits (65), Expect = 7.2 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Frame = -1 Query: 182 PIQSTCSGSDPSSK*NSGRPPLL-GSNPGFIFGTPLVRMMRASMPSIAGAMLPCXP 18 P+Q T SGS SS S +P GS PG G+ +RA+ S +LP P Sbjct: 721 PLQRTSSGSSSSSSTPSSQPSSQGGSQPGSQAGSSERTRVRANSKSEGSPVLPHEP 776
>GSPD_PSEAE (P35818) General secretion pathway protein D precursor| Length = 658 Score = 29.6 bits (65), Expect = 7.2 Identities = 29/123 (23%), Positives = 43/123 (34%) Frame = +1 Query: 199 DAAKSIGVKQIVLVGSMGGTDINHPLNKLGNGNILVWKRKAEQYLADSGVPYTIIRAGGL 378 D ++GV+ + G MGGT N L G +L + E A +P I G Sbjct: 373 DIQDAVGVQWAINKGGMGGTKTNFANTGLSIGTLL---QSLESNKAPESIPDGAIVGIGS 429 Query: 379 QDKDGGVRELIVGKDDEILKTETKTVARADVAEVCIQALLFEEAKFKAFDLASKPEGEGT 558 V L +L T + AE+ L+ + F+ + EG Sbjct: 430 SSFGALVTALSANTKSNLLSTPSLLTLDNQKAEI----LVGQNVPFQTGSYTTNSEGSSN 485 Query: 559 PTT 567 P T Sbjct: 486 PFT 488
>DHX33_MOUSE (Q80VY9) Putative ATP-dependent RNA helicase DHX33 (EC 3.6.1.-)| (DEAH box protein 33) Length = 698 Score = 29.6 bits (65), Expect = 7.2 Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 13/89 (14%) Frame = +1 Query: 316 KAEQYLADSGVPYTII----------RAGGLQDKDGGVRELIVGKDDEILKTETKTVA-- 459 KA++Y DSG+ + R G +D G+ + +DE K E TV Sbjct: 367 KAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLY-TEDEFEKFEKMTVPEI 425 Query: 460 -RADVAEVCIQALLFEEAKFKAFDLASKP 543 R ++A V +Q L + FD SKP Sbjct: 426 QRCNLASVILQLLAMKVPNVLTFDFMSKP 454
>IGF1R_MOUSE (Q60751) Insulin-like growth factor 1 receptor precursor (EC| 2.7.10.1) (Insulin-like growth factor I receptor) (IGF-I receptor) [Contains: Insulin-like growth factor 1 receptor alpha chain; Insulin-like growth factor 1 receptor beta chain] Length = 1373 Score = 29.6 bits (65), Expect = 7.2 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = +3 Query: 354 HNYKSWRTTRQRWWCA*VDCWKGRRDLED*NKNCCQGRCCRSLHT 488 +NY+ W T R + C V C G+R + N CC C S HT Sbjct: 201 YNYRCWTTNRCQKMCPSV-C--GKRACTE-NNECCHPECLGSCHT 241
>PARM1_PONPY (Q5RAF8) Protein PARM-1 precursor| Length = 310 Score = 29.6 bits (65), Expect = 7.2 Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Frame = -1 Query: 554 PSPSGFEARSNALNFASSNSKACMQTSATSALATXXXXXXX-XXXXFPTINSRTPPSLSC 378 PSP GF + S ++ ++ + + T AT P + +P SLS Sbjct: 104 PSPPGFSSTSGGVHLTTTLEEHSLGTPEAGVAATLSQSAAEPPTLISPQAPASSPSSLST 163 Query: 377 SPPALIIV 354 SPP + V Sbjct: 164 SPPEVFSV 171
>PARM1_HUMAN (Q6UWI2) Protein PARM-1 precursor| Length = 310 Score = 29.6 bits (65), Expect = 7.2 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Frame = -1 Query: 554 PSPSGFEARSNALNFASSNSKACMQTSATSALATXXXXXXX-XXXXFPTINSRTPPSLSC 378 PSPSGF + S ++ ++ + T AT P + +P SLS Sbjct: 104 PSPSGFSSTSGGVHLTTTLEEHSSGTPEAGVAATLSQSAAEPPTLISPQAPASSPSSLST 163 Query: 377 SPP 369 SPP Sbjct: 164 SPP 166
>IGF1R_RAT (P24062) Insulin-like growth factor 1 receptor precursor (EC| 2.7.10.1) (Insulin-like growth factor I receptor) (IGF-I receptor) [Contains: Insulin-like growth factor 1 receptor alpha chain; Insulin-like growth factor 1 receptor beta chain] Length = 1370 Score = 29.6 bits (65), Expect = 7.2 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = +3 Query: 354 HNYKSWRTTRQRWWCA*VDCWKGRRDLED*NKNCCQGRCCRSLHT 488 +NY+ W T R + C V C G+R + N CC C S HT Sbjct: 201 YNYRCWTTNRCQKMCPSV-C--GKRACTE-NNECCHPECLGSCHT 241
>SYV_CHLMU (Q9PK91) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 939 Score = 29.3 bits (64), Expect = 9.5 Identities = 10/29 (34%), Positives = 15/29 (51%) Frame = +3 Query: 351 IHNYKSWRTTRQRWWCA*VDCWKGRRDLE 437 ++N K W +RQ WW + W + D E Sbjct: 398 VNNLKDWCISRQLWWGHRIPVWHNKHDEE 426
>AATM_RAT (P00507) Aspartate aminotransferase, mitochondrial precursor (EC| 2.6.1.1) (Transaminase A) (Glutamate oxaloacetate transaminase 2) Length = 430 Score = 29.3 bits (64), Expect = 9.5 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = +1 Query: 286 GNGNILVWKRKAEQYLADSGVPYTIIRAGGLQDKDGGVRELIVGKDDEILKT 441 G +L RKAE +A + + GGL D EL +G++ E+LK+ Sbjct: 72 GKPYVLPSVRKAEAQIAGKNLDKEYLPIGGLADFCKASAELALGENSEVLKS 123 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 90,723,648 Number of Sequences: 219361 Number of extensions: 2090116 Number of successful extensions: 6628 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 6338 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6621 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5481822624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
