ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags9j10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_465531.1| Oryza sativa (japonica cultivar-group), mRNA 389 e-105
2ref|XM_507481.1| PREDICTED Oryza sativa (japonica cultivar-group... 389 e-105
3ref|XM_507480.1| PREDICTED Oryza sativa (japonica cultivar-group... 389 e-105
4ref|XM_507479.1| PREDICTED Oryza sativa (japonica cultivar-group... 389 e-105
5ref|XM_507478.1| PREDICTED Oryza sativa (japonica cultivar-group... 389 e-105
6ref|XM_507477.1| PREDICTED Oryza sativa (japonica cultivar-group... 389 e-105
7ref|XM_507476.1| PREDICTED Oryza sativa (japonica cultivar-group... 389 e-105
8ref|XM_506800.2| PREDICTED Oryza sativa (japonica cultivar-group... 389 e-105
9dbj|AK119187.1| Oryza sativa (japonica cultivar-group) cDNA clon... 389 e-105
10dbj|AK104516.1| Oryza sativa (japonica cultivar-group) cDNA clon... 389 e-105
11dbj|AK104351.1| Oryza sativa (japonica cultivar-group) cDNA clon... 389 e-105
12dbj|AK104241.1| Oryza sativa (japonica cultivar-group) cDNA clon... 389 e-105
13dbj|AK104223.1| Oryza sativa (japonica cultivar-group) cDNA clon... 389 e-105
14dbj|AK104187.1| Oryza sativa (japonica cultivar-group) cDNA clon... 389 e-105
15dbj|AK104503.1| Oryza sativa (japonica cultivar-group) cDNA clon... 381 e-102
16dbj|AK071205.1| Oryza sativa (japonica cultivar-group) cDNA clon... 381 e-102
17dbj|AB112061.1| Oryza sativa (indica cultivar-group) OsCTP gene,... 333 4e-88
18dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 101 3e-18
19dbj|AP004850.3| Oryza sativa (japonica cultivar-group) genomic D... 101 3e-18
20gb|AC105744.8| Oryza sativa (japonica cultivar-group) chromosome... 72 2e-09
21gb|AC104616.5| Oryza sativa (japonica cultivar-group) chromosome... 72 2e-09
22dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
23gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 72 2e-09
24dbj|AP005290.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.13
25dbj|AK119339.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.13
26gb|BT014152.1| Lycopersicon esculentum clone 133271F, mRNA sequence 42 2.1
27ref|XM_847128.1| PREDICTED: Canis familiaris similar to CG9047-P... 42 2.1
28gb|AC084781.2|AC084781 Homo sapiens chromosome 15 clone RP11-355... 42 2.1
29dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 2.1
30emb|AL669944.8| Mouse DNA sequence from clone RP23-388G23 on chr... 42 2.1
31ref|NM_191437.1| Oryza sativa (japonica cultivar-group), predic... 40 8.3
32gb|BC081623.1| Danio rerio zgc:92214, mRNA (cDNA clone MGC:92214... 40 8.3
33ref|XM_415711.1| PREDICTED: Gallus gallus similar to huntingtin ... 40 8.3
34emb|AL033510.1|CEY40H7A Caenorhabditis elegans YAC Y40H7A, compl... 40 8.3
35ref|XM_504397.1| Yarrowia lipolytica CLIB122, YALI0E25784g predi... 40 8.3
36gb|AC104249.7| Homo sapiens chromosome 11, clone RP11-1084A14, c... 40 8.3
37gb|AC105908.5| Homo sapiens chromosome 11, clone RP11-636L13, co... 40 8.3
38dbj|AK122911.1| Homo sapiens cDNA FLJ16588 fis, clone TESTI40010... 40 8.3
39gb|AY895166.1| Gallus gallus BAC bW108010 chemokine-like ligand ... 40 8.3
40ref|NM_070429.1| Caenorhabditis elegans Y40H7A.3 (Y40H7A.3) mRNA... 40 8.3
41ref|NM_070428.1| Caenorhabditis elegans Y40H7A.2 (Y40H7A.2) mRNA... 40 8.3
42emb|BX248508.10| Zebrafish DNA sequence from clone CH211-238F11 ... 40 8.3
43emb|AL805896.12| Mouse DNA sequence from clone RP23-402I8 on chr... 40 8.3
44gb|AC117498.6| Homo sapiens 12 BAC RP11-579D7 (Roswell Park Canc... 40 8.3
45ref|NM_001004587.1| Danio rerio zgc:92214 (zgc:92214), mRNA 40 8.3
46dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 40 8.3
47gb|AC118620.10| Mus musculus chromosome 3, clone RP24-571H24, co... 40 8.3
48emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 40 8.3

>ref|XM_465531.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1103

 Score =  389 bits (196), Expect = e-105
 Identities = 331/376 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcacgccgcagcatccggccaggacttgcacccttgaatccgaagatgaagccatatgct 60
           |||||||| ||||||| || ||||| ||||| ||||| ||||| || |||||||||||||
Sbjct: 343 gcacgccggagcatcctgcgaggacctgcacacttgagtccgacgaggaagccatatgct 402

                                                                       
Query: 61  ggggaattgcttattgtgtcaaaggtggtctagaaaaagagcgagaagcaatgcagtact 120
           |||| ||||| || ||||||||||| || ||  |||| |||| |||||||||| ||||||
Sbjct: 403 gggggattgcatactgtgtcaaaggggggcttaaaaaggagcaagaagcaatgaagtact 462

                                                                       
Query: 121 tggagagaagagaatgcgagtatgaccagaagatctctgtggatttctacaaggatggaa 180
           |||| |||||||| || |||||||||||||||||||||||||||||||||||||| ||| 
Sbjct: 463 tggaaagaagagagtgtgagtatgaccagaagatctctgtggatttctacaaggaaggag 522

                                                                       
Query: 181 attctctggaaccagctgtgacggatgtattagtattcgtatccactcctgatccagttg 240
           ||||| || | ||||||||||| | |||| |||| || |||||||||||||||||||| |
Sbjct: 523 attctttgaagccagctgtgacaggtgtactagtctttgtatccactcctgatccagtag 582

                                                                       
Query: 241 gcaacaagtactatcttggccctgctgctttggaggatatggcaaggcaaattgctacag 300
           ||||||| ||||||||||| |||||| |||||||||| ||||||||||||||||||||||
Sbjct: 583 gcaacaaatactatcttgggcctgctcctttggaggacatggcaaggcaaattgctacag 642

                                                                       
Query: 301 ccagtggccctaatggatataatagggactacctgttctcaatggagaaggcactgtcca 360
           ||| |||||| |||||  |||| ||||| |||||||||||||||||||||||| ||||||
Sbjct: 643 ccaatggccccaatgggaataacagggattacctgttctcaatggagaaggcattgtcca 702

                           
Query: 361 atataagccatgaaga 376
           | ||| ||||||||||
Sbjct: 703 acatatgccatgaaga 718



to top

>ref|XM_507481.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1342_D02.8 mRNA
          Length = 1112

 Score =  389 bits (196), Expect = e-105
 Identities = 331/376 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcacgccgcagcatccggccaggacttgcacccttgaatccgaagatgaagccatatgct 60
           |||||||| ||||||| || ||||| ||||| ||||| ||||| || |||||||||||||
Sbjct: 348 gcacgccggagcatcctgcgaggacctgcacacttgagtccgacgaggaagccatatgct 407

                                                                       
Query: 61  ggggaattgcttattgtgtcaaaggtggtctagaaaaagagcgagaagcaatgcagtact 120
           |||| ||||| || ||||||||||| || ||  |||| |||| |||||||||| ||||||
Sbjct: 408 gggggattgcatactgtgtcaaaggggggcttaaaaaggagcaagaagcaatgaagtact 467

                                                                       
Query: 121 tggagagaagagaatgcgagtatgaccagaagatctctgtggatttctacaaggatggaa 180
           |||| |||||||| || |||||||||||||||||||||||||||||||||||||| ||| 
Sbjct: 468 tggaaagaagagagtgtgagtatgaccagaagatctctgtggatttctacaaggaaggag 527

                                                                       
Query: 181 attctctggaaccagctgtgacggatgtattagtattcgtatccactcctgatccagttg 240
           ||||| || | ||||||||||| | |||| |||| || |||||||||||||||||||| |
Sbjct: 528 attctttgaagccagctgtgacaggtgtactagtctttgtatccactcctgatccagtag 587

                                                                       
Query: 241 gcaacaagtactatcttggccctgctgctttggaggatatggcaaggcaaattgctacag 300
           ||||||| ||||||||||| |||||| |||||||||| ||||||||||||||||||||||
Sbjct: 588 gcaacaaatactatcttgggcctgctcctttggaggacatggcaaggcaaattgctacag 647

                                                                       
Query: 301 ccagtggccctaatggatataatagggactacctgttctcaatggagaaggcactgtcca 360
           ||| |||||| |||||  |||| ||||| |||||||||||||||||||||||| ||||||
Sbjct: 648 ccaatggccccaatgggaataacagggattacctgttctcaatggagaaggcattgtcca 707

                           
Query: 361 atataagccatgaaga 376
           | ||| ||||||||||
Sbjct: 708 acatatgccatgaaga 723



to top

>ref|XM_507480.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1342_D02.8 mRNA
          Length = 1110

 Score =  389 bits (196), Expect = e-105
 Identities = 331/376 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcacgccgcagcatccggccaggacttgcacccttgaatccgaagatgaagccatatgct 60
           |||||||| ||||||| || ||||| ||||| ||||| ||||| || |||||||||||||
Sbjct: 343 gcacgccggagcatcctgcgaggacctgcacacttgagtccgacgaggaagccatatgct 402

                                                                       
Query: 61  ggggaattgcttattgtgtcaaaggtggtctagaaaaagagcgagaagcaatgcagtact 120
           |||| ||||| || ||||||||||| || ||  |||| |||| |||||||||| ||||||
Sbjct: 403 gggggattgcatactgtgtcaaaggggggcttaaaaaggagcaagaagcaatgaagtact 462

                                                                       
Query: 121 tggagagaagagaatgcgagtatgaccagaagatctctgtggatttctacaaggatggaa 180
           |||| |||||||| || |||||||||||||||||||||||||||||||||||||| ||| 
Sbjct: 463 tggaaagaagagagtgtgagtatgaccagaagatctctgtggatttctacaaggaaggag 522

                                                                       
Query: 181 attctctggaaccagctgtgacggatgtattagtattcgtatccactcctgatccagttg 240
           ||||| || | ||||||||||| | |||| |||| || |||||||||||||||||||| |
Sbjct: 523 attctttgaagccagctgtgacaggtgtactagtctttgtatccactcctgatccagtag 582

                                                                       
Query: 241 gcaacaagtactatcttggccctgctgctttggaggatatggcaaggcaaattgctacag 300
           ||||||| ||||||||||| |||||| |||||||||| ||||||||||||||||||||||
Sbjct: 583 gcaacaaatactatcttgggcctgctcctttggaggacatggcaaggcaaattgctacag 642

                                                                       
Query: 301 ccagtggccctaatggatataatagggactacctgttctcaatggagaaggcactgtcca 360
           ||| |||||| |||||  |||| ||||| |||||||||||||||||||||||| ||||||
Sbjct: 643 ccaatggccccaatgggaataacagggattacctgttctcaatggagaaggcattgtcca 702

                           
Query: 361 atataagccatgaaga 376
           | ||| ||||||||||
Sbjct: 703 acatatgccatgaaga 718



to top

>ref|XM_507479.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1342_D02.8 mRNA
          Length = 1110

 Score =  389 bits (196), Expect = e-105
 Identities = 331/376 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcacgccgcagcatccggccaggacttgcacccttgaatccgaagatgaagccatatgct 60
           |||||||| ||||||| || ||||| ||||| ||||| ||||| || |||||||||||||
Sbjct: 343 gcacgccggagcatcctgcgaggacctgcacacttgagtccgacgaggaagccatatgct 402

                                                                       
Query: 61  ggggaattgcttattgtgtcaaaggtggtctagaaaaagagcgagaagcaatgcagtact 120
           |||| ||||| || ||||||||||| || ||  |||| |||| |||||||||| ||||||
Sbjct: 403 gggggattgcatactgtgtcaaaggggggcttaaaaaggagcaagaagcaatgaagtact 462

                                                                       
Query: 121 tggagagaagagaatgcgagtatgaccagaagatctctgtggatttctacaaggatggaa 180
           |||| |||||||| || |||||||||||||||||||||||||||||||||||||| ||| 
Sbjct: 463 tggaaagaagagagtgtgagtatgaccagaagatctctgtggatttctacaaggaaggag 522

                                                                       
Query: 181 attctctggaaccagctgtgacggatgtattagtattcgtatccactcctgatccagttg 240
           ||||| || | ||||||||||| | |||| |||| || |||||||||||||||||||| |
Sbjct: 523 attctttgaagccagctgtgacaggtgtactagtctttgtatccactcctgatccagtag 582

                                                                       
Query: 241 gcaacaagtactatcttggccctgctgctttggaggatatggcaaggcaaattgctacag 300
           ||||||| ||||||||||| |||||| |||||||||| ||||||||||||||||||||||
Sbjct: 583 gcaacaaatactatcttgggcctgctcctttggaggacatggcaaggcaaattgctacag 642

                                                                       
Query: 301 ccagtggccctaatggatataatagggactacctgttctcaatggagaaggcactgtcca 360
           ||| |||||| |||||  |||| ||||| |||||||||||||||||||||||| ||||||
Sbjct: 643 ccaatggccccaatgggaataacagggattacctgttctcaatggagaaggcattgtcca 702

                           
Query: 361 atataagccatgaaga 376
           | ||| ||||||||||
Sbjct: 703 acatatgccatgaaga 718



to top

>ref|XM_507478.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1342_D02.8 mRNA
          Length = 1115

 Score =  389 bits (196), Expect = e-105
 Identities = 331/376 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcacgccgcagcatccggccaggacttgcacccttgaatccgaagatgaagccatatgct 60
           |||||||| ||||||| || ||||| ||||| ||||| ||||| || |||||||||||||
Sbjct: 348 gcacgccggagcatcctgcgaggacctgcacacttgagtccgacgaggaagccatatgct 407

                                                                       
Query: 61  ggggaattgcttattgtgtcaaaggtggtctagaaaaagagcgagaagcaatgcagtact 120
           |||| ||||| || ||||||||||| || ||  |||| |||| |||||||||| ||||||
Sbjct: 408 gggggattgcatactgtgtcaaaggggggcttaaaaaggagcaagaagcaatgaagtact 467

                                                                       
Query: 121 tggagagaagagaatgcgagtatgaccagaagatctctgtggatttctacaaggatggaa 180
           |||| |||||||| || |||||||||||||||||||||||||||||||||||||| ||| 
Sbjct: 468 tggaaagaagagagtgtgagtatgaccagaagatctctgtggatttctacaaggaaggag 527

                                                                       
Query: 181 attctctggaaccagctgtgacggatgtattagtattcgtatccactcctgatccagttg 240
           ||||| || | ||||||||||| | |||| |||| || |||||||||||||||||||| |
Sbjct: 528 attctttgaagccagctgtgacaggtgtactagtctttgtatccactcctgatccagtag 587

                                                                       
Query: 241 gcaacaagtactatcttggccctgctgctttggaggatatggcaaggcaaattgctacag 300
           ||||||| ||||||||||| |||||| |||||||||| ||||||||||||||||||||||
Sbjct: 588 gcaacaaatactatcttgggcctgctcctttggaggacatggcaaggcaaattgctacag 647

                                                                       
Query: 301 ccagtggccctaatggatataatagggactacctgttctcaatggagaaggcactgtcca 360
           ||| |||||| |||||  |||| ||||| |||||||||||||||||||||||| ||||||
Sbjct: 648 ccaatggccccaatgggaataacagggattacctgttctcaatggagaaggcattgtcca 707

                           
Query: 361 atataagccatgaaga 376
           | ||| ||||||||||
Sbjct: 708 acatatgccatgaaga 723



to top

>ref|XM_507477.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1342_D02.8 mRNA
          Length = 1116

 Score =  389 bits (196), Expect = e-105
 Identities = 331/376 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcacgccgcagcatccggccaggacttgcacccttgaatccgaagatgaagccatatgct 60
           |||||||| ||||||| || ||||| ||||| ||||| ||||| || |||||||||||||
Sbjct: 349 gcacgccggagcatcctgcgaggacctgcacacttgagtccgacgaggaagccatatgct 408

                                                                       
Query: 61  ggggaattgcttattgtgtcaaaggtggtctagaaaaagagcgagaagcaatgcagtact 120
           |||| ||||| || ||||||||||| || ||  |||| |||| |||||||||| ||||||
Sbjct: 409 gggggattgcatactgtgtcaaaggggggcttaaaaaggagcaagaagcaatgaagtact 468

                                                                       
Query: 121 tggagagaagagaatgcgagtatgaccagaagatctctgtggatttctacaaggatggaa 180
           |||| |||||||| || |||||||||||||||||||||||||||||||||||||| ||| 
Sbjct: 469 tggaaagaagagagtgtgagtatgaccagaagatctctgtggatttctacaaggaaggag 528

                                                                       
Query: 181 attctctggaaccagctgtgacggatgtattagtattcgtatccactcctgatccagttg 240
           ||||| || | ||||||||||| | |||| |||| || |||||||||||||||||||| |
Sbjct: 529 attctttgaagccagctgtgacaggtgtactagtctttgtatccactcctgatccagtag 588

                                                                       
Query: 241 gcaacaagtactatcttggccctgctgctttggaggatatggcaaggcaaattgctacag 300
           ||||||| ||||||||||| |||||| |||||||||| ||||||||||||||||||||||
Sbjct: 589 gcaacaaatactatcttgggcctgctcctttggaggacatggcaaggcaaattgctacag 648

                                                                       
Query: 301 ccagtggccctaatggatataatagggactacctgttctcaatggagaaggcactgtcca 360
           ||| |||||| |||||  |||| ||||| |||||||||||||||||||||||| ||||||
Sbjct: 649 ccaatggccccaatgggaataacagggattacctgttctcaatggagaaggcattgtcca 708

                           
Query: 361 atataagccatgaaga 376
           | ||| ||||||||||
Sbjct: 709 acatatgccatgaaga 724



to top

>ref|XM_507476.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1342_D02.8 mRNA
          Length = 1114

 Score =  389 bits (196), Expect = e-105
 Identities = 331/376 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcacgccgcagcatccggccaggacttgcacccttgaatccgaagatgaagccatatgct 60
           |||||||| ||||||| || ||||| ||||| ||||| ||||| || |||||||||||||
Sbjct: 345 gcacgccggagcatcctgcgaggacctgcacacttgagtccgacgaggaagccatatgct 404

                                                                       
Query: 61  ggggaattgcttattgtgtcaaaggtggtctagaaaaagagcgagaagcaatgcagtact 120
           |||| ||||| || ||||||||||| || ||  |||| |||| |||||||||| ||||||
Sbjct: 405 gggggattgcatactgtgtcaaaggggggcttaaaaaggagcaagaagcaatgaagtact 464

                                                                       
Query: 121 tggagagaagagaatgcgagtatgaccagaagatctctgtggatttctacaaggatggaa 180
           |||| |||||||| || |||||||||||||||||||||||||||||||||||||| ||| 
Sbjct: 465 tggaaagaagagagtgtgagtatgaccagaagatctctgtggatttctacaaggaaggag 524

                                                                       
Query: 181 attctctggaaccagctgtgacggatgtattagtattcgtatccactcctgatccagttg 240
           ||||| || | ||||||||||| | |||| |||| || |||||||||||||||||||| |
Sbjct: 525 attctttgaagccagctgtgacaggtgtactagtctttgtatccactcctgatccagtag 584

                                                                       
Query: 241 gcaacaagtactatcttggccctgctgctttggaggatatggcaaggcaaattgctacag 300
           ||||||| ||||||||||| |||||| |||||||||| ||||||||||||||||||||||
Sbjct: 585 gcaacaaatactatcttgggcctgctcctttggaggacatggcaaggcaaattgctacag 644

                                                                       
Query: 301 ccagtggccctaatggatataatagggactacctgttctcaatggagaaggcactgtcca 360
           ||| |||||| |||||  |||| ||||| |||||||||||||||||||||||| ||||||
Sbjct: 645 ccaatggccccaatgggaataacagggattacctgttctcaatggagaaggcattgtcca 704

                           
Query: 361 atataagccatgaaga 376
           | ||| ||||||||||
Sbjct: 705 acatatgccatgaaga 720



to top

>ref|XM_506800.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1342_D02.8 mRNA
          Length = 1130

 Score =  389 bits (196), Expect = e-105
 Identities = 331/376 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcacgccgcagcatccggccaggacttgcacccttgaatccgaagatgaagccatatgct 60
           |||||||| ||||||| || ||||| ||||| ||||| ||||| || |||||||||||||
Sbjct: 350 gcacgccggagcatcctgcgaggacctgcacacttgagtccgacgaggaagccatatgct 409

                                                                       
Query: 61  ggggaattgcttattgtgtcaaaggtggtctagaaaaagagcgagaagcaatgcagtact 120
           |||| ||||| || ||||||||||| || ||  |||| |||| |||||||||| ||||||
Sbjct: 410 gggggattgcatactgtgtcaaaggggggcttaaaaaggagcaagaagcaatgaagtact 469

                                                                       
Query: 121 tggagagaagagaatgcgagtatgaccagaagatctctgtggatttctacaaggatggaa 180
           |||| |||||||| || |||||||||||||||||||||||||||||||||||||| ||| 
Sbjct: 470 tggaaagaagagagtgtgagtatgaccagaagatctctgtggatttctacaaggaaggag 529

                                                                       
Query: 181 attctctggaaccagctgtgacggatgtattagtattcgtatccactcctgatccagttg 240
           ||||| || | ||||||||||| | |||| |||| || |||||||||||||||||||| |
Sbjct: 530 attctttgaagccagctgtgacaggtgtactagtctttgtatccactcctgatccagtag 589

                                                                       
Query: 241 gcaacaagtactatcttggccctgctgctttggaggatatggcaaggcaaattgctacag 300
           ||||||| ||||||||||| |||||| |||||||||| ||||||||||||||||||||||
Sbjct: 590 gcaacaaatactatcttgggcctgctcctttggaggacatggcaaggcaaattgctacag 649

                                                                       
Query: 301 ccagtggccctaatggatataatagggactacctgttctcaatggagaaggcactgtcca 360
           ||| |||||| |||||  |||| ||||| |||||||||||||||||||||||| ||||||
Sbjct: 650 ccaatggccccaatgggaataacagggattacctgttctcaatggagaaggcattgtcca 709

                           
Query: 361 atataagccatgaaga 376
           | ||| ||||||||||
Sbjct: 710 acatatgccatgaaga 725



to top

>dbj|AK119187.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G07, full
           insert sequence
          Length = 1110

 Score =  389 bits (196), Expect = e-105
 Identities = 331/376 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcacgccgcagcatccggccaggacttgcacccttgaatccgaagatgaagccatatgct 60
           |||||||| ||||||| || ||||| ||||| ||||| ||||| || |||||||||||||
Sbjct: 343 gcacgccggagcatcctgcgaggacctgcacacttgagtccgacgaggaagccatatgct 402

                                                                       
Query: 61  ggggaattgcttattgtgtcaaaggtggtctagaaaaagagcgagaagcaatgcagtact 120
           |||| ||||| || ||||||||||| || ||  |||| |||| |||||||||| ||||||
Sbjct: 403 gggggattgcatactgtgtcaaaggggggcttaaaaaggagcaagaagcaatgaagtact 462

                                                                       
Query: 121 tggagagaagagaatgcgagtatgaccagaagatctctgtggatttctacaaggatggaa 180
           |||| |||||||| || |||||||||||||||||||||||||||||||||||||| ||| 
Sbjct: 463 tggaaagaagagagtgtgagtatgaccagaagatctctgtggatttctacaaggaaggag 522

                                                                       
Query: 181 attctctggaaccagctgtgacggatgtattagtattcgtatccactcctgatccagttg 240
           ||||| || | ||||||||||| | |||| |||| || |||||||||||||||||||| |
Sbjct: 523 attctttgaagccagctgtgacaggtgtactagtctttgtatccactcctgatccagtag 582

                                                                       
Query: 241 gcaacaagtactatcttggccctgctgctttggaggatatggcaaggcaaattgctacag 300
           ||||||| ||||||||||| |||||| |||||||||| ||||||||||||||||||||||
Sbjct: 583 gcaacaaatactatcttgggcctgctcctttggaggacatggcaaggcaaattgctacag 642

                                                                       
Query: 301 ccagtggccctaatggatataatagggactacctgttctcaatggagaaggcactgtcca 360
           ||| |||||| |||||  |||| ||||| |||||||||||||||||||||||| ||||||
Sbjct: 643 ccaatggccccaatgggaataacagggattacctgttctcaatggagaaggcattgtcca 702

                           
Query: 361 atataagccatgaaga 376
           | ||| ||||||||||
Sbjct: 703 acatatgccatgaaga 718



to top

>dbj|AK104516.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-C03, full
           insert sequence
          Length = 1115

 Score =  389 bits (196), Expect = e-105
 Identities = 331/376 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcacgccgcagcatccggccaggacttgcacccttgaatccgaagatgaagccatatgct 60
           |||||||| ||||||| || ||||| ||||| ||||| ||||| || |||||||||||||
Sbjct: 348 gcacgccggagcatcctgcgaggacctgcacacttgagtccgacgaggaagccatatgct 407

                                                                       
Query: 61  ggggaattgcttattgtgtcaaaggtggtctagaaaaagagcgagaagcaatgcagtact 120
           |||| ||||| || ||||||||||| || ||  |||| |||| |||||||||| ||||||
Sbjct: 408 gggggattgcatactgtgtcaaaggggggcttaaaaaggagcaagaagcaatgaagtact 467

                                                                       
Query: 121 tggagagaagagaatgcgagtatgaccagaagatctctgtggatttctacaaggatggaa 180
           |||| |||||||| || |||||||||||||||||||||||||||||||||||||| ||| 
Sbjct: 468 tggaaagaagagagtgtgagtatgaccagaagatctctgtggatttctacaaggaaggag 527

                                                                       
Query: 181 attctctggaaccagctgtgacggatgtattagtattcgtatccactcctgatccagttg 240
           ||||| || | ||||||||||| | |||| |||| || |||||||||||||||||||| |
Sbjct: 528 attctttgaagccagctgtgacaggtgtactagtctttgtatccactcctgatccagtag 587

                                                                       
Query: 241 gcaacaagtactatcttggccctgctgctttggaggatatggcaaggcaaattgctacag 300
           ||||||| ||||||||||| |||||| |||||||||| ||||||||||||||||||||||
Sbjct: 588 gcaacaaatactatcttgggcctgctcctttggaggacatggcaaggcaaattgctacag 647

                                                                       
Query: 301 ccagtggccctaatggatataatagggactacctgttctcaatggagaaggcactgtcca 360
           ||| |||||| |||||  |||| ||||| |||||||||||||||||||||||| ||||||
Sbjct: 648 ccaatggccccaatgggaataacagggattacctgttctcaatggagaaggcattgtcca 707

                           
Query: 361 atataagccatgaaga 376
           | ||| ||||||||||
Sbjct: 708 acatatgccatgaaga 723



to top

>dbj|AK104351.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G09, full
           insert sequence
          Length = 1114

 Score =  389 bits (196), Expect = e-105
 Identities = 331/376 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcacgccgcagcatccggccaggacttgcacccttgaatccgaagatgaagccatatgct 60
           |||||||| ||||||| || ||||| ||||| ||||| ||||| || |||||||||||||
Sbjct: 345 gcacgccggagcatcctgcgaggacctgcacacttgagtccgacgaggaagccatatgct 404

                                                                       
Query: 61  ggggaattgcttattgtgtcaaaggtggtctagaaaaagagcgagaagcaatgcagtact 120
           |||| ||||| || ||||||||||| || ||  |||| |||| |||||||||| ||||||
Sbjct: 405 gggggattgcatactgtgtcaaaggggggcttaaaaaggagcaagaagcaatgaagtact 464

                                                                       
Query: 121 tggagagaagagaatgcgagtatgaccagaagatctctgtggatttctacaaggatggaa 180
           |||| |||||||| || |||||||||||||||||||||||||||||||||||||| ||| 
Sbjct: 465 tggaaagaagagagtgtgagtatgaccagaagatctctgtggatttctacaaggaaggag 524

                                                                       
Query: 181 attctctggaaccagctgtgacggatgtattagtattcgtatccactcctgatccagttg 240
           ||||| || | ||||||||||| | |||| |||| || |||||||||||||||||||| |
Sbjct: 525 attctttgaagccagctgtgacaggtgtactagtctttgtatccactcctgatccagtag 584

                                                                       
Query: 241 gcaacaagtactatcttggccctgctgctttggaggatatggcaaggcaaattgctacag 300
           ||||||| ||||||||||| |||||| |||||||||| ||||||||||||||||||||||
Sbjct: 585 gcaacaaatactatcttgggcctgctcctttggaggacatggcaaggcaaattgctacag 644

                                                                       
Query: 301 ccagtggccctaatggatataatagggactacctgttctcaatggagaaggcactgtcca 360
           ||| |||||| |||||  |||| ||||| |||||||||||||||||||||||| ||||||
Sbjct: 645 ccaatggccccaatgggaataacagggattacctgttctcaatggagaaggcattgtcca 704

                           
Query: 361 atataagccatgaaga 376
           | ||| ||||||||||
Sbjct: 705 acatatgccatgaaga 720



to top

>dbj|AK104241.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-B07, full
           insert sequence
          Length = 1112

 Score =  389 bits (196), Expect = e-105
 Identities = 331/376 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcacgccgcagcatccggccaggacttgcacccttgaatccgaagatgaagccatatgct 60
           |||||||| ||||||| || ||||| ||||| ||||| ||||| || |||||||||||||
Sbjct: 348 gcacgccggagcatcctgcgaggacctgcacacttgagtccgacgaggaagccatatgct 407

                                                                       
Query: 61  ggggaattgcttattgtgtcaaaggtggtctagaaaaagagcgagaagcaatgcagtact 120
           |||| ||||| || ||||||||||| || ||  |||| |||| |||||||||| ||||||
Sbjct: 408 gggggattgcatactgtgtcaaaggggggcttaaaaaggagcaagaagcaatgaagtact 467

                                                                       
Query: 121 tggagagaagagaatgcgagtatgaccagaagatctctgtggatttctacaaggatggaa 180
           |||| |||||||| || |||||||||||||||||||||||||||||||||||||| ||| 
Sbjct: 468 tggaaagaagagagtgtgagtatgaccagaagatctctgtggatttctacaaggaaggag 527

                                                                       
Query: 181 attctctggaaccagctgtgacggatgtattagtattcgtatccactcctgatccagttg 240
           ||||| || | ||||||||||| | |||| |||| || |||||||||||||||||||| |
Sbjct: 528 attctttgaagccagctgtgacaggtgtactagtctttgtatccactcctgatccagtag 587

                                                                       
Query: 241 gcaacaagtactatcttggccctgctgctttggaggatatggcaaggcaaattgctacag 300
           ||||||| ||||||||||| |||||| |||||||||| ||||||||||||||||||||||
Sbjct: 588 gcaacaaatactatcttgggcctgctcctttggaggacatggcaaggcaaattgctacag 647

                                                                       
Query: 301 ccagtggccctaatggatataatagggactacctgttctcaatggagaaggcactgtcca 360
           ||| |||||| |||||  |||| ||||| |||||||||||||||||||||||| ||||||
Sbjct: 648 ccaatggccccaatgggaataacagggattacctgttctcaatggagaaggcattgtcca 707

                           
Query: 361 atataagccatgaaga 376
           | ||| ||||||||||
Sbjct: 708 acatatgccatgaaga 723



to top

>dbj|AK104223.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-E10, full
           insert sequence
          Length = 1114

 Score =  389 bits (196), Expect = e-105
 Identities = 331/376 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcacgccgcagcatccggccaggacttgcacccttgaatccgaagatgaagccatatgct 60
           |||||||| ||||||| || ||||| ||||| ||||| ||||| || |||||||||||||
Sbjct: 347 gcacgccggagcatcctgcgaggacctgcacacttgagtccgacgaggaagccatatgct 406

                                                                       
Query: 61  ggggaattgcttattgtgtcaaaggtggtctagaaaaagagcgagaagcaatgcagtact 120
           |||| ||||| || ||||||||||| || ||  |||| |||| |||||||||| ||||||
Sbjct: 407 gggggattgcatactgtgtcaaaggggggcttaaaaaggagcaagaagcaatgaagtact 466

                                                                       
Query: 121 tggagagaagagaatgcgagtatgaccagaagatctctgtggatttctacaaggatggaa 180
           |||| |||||||| || |||||||||||||||||||||||||||||||||||||| ||| 
Sbjct: 467 tggaaagaagagagtgtgagtatgaccagaagatctctgtggatttctacaaggaaggag 526

                                                                       
Query: 181 attctctggaaccagctgtgacggatgtattagtattcgtatccactcctgatccagttg 240
           ||||| || | ||||||||||| | |||| |||| || |||||||||||||||||||| |
Sbjct: 527 attctttgaagccagctgtgacaggtgtactagtctttgtatccactcctgatccagtag 586

                                                                       
Query: 241 gcaacaagtactatcttggccctgctgctttggaggatatggcaaggcaaattgctacag 300
           ||||||| ||||||||||| |||||| |||||||||| ||||||||||||||||||||||
Sbjct: 587 gcaacaaatactatcttgggcctgctcctttggaggacatggcaaggcaaattgctacag 646

                                                                       
Query: 301 ccagtggccctaatggatataatagggactacctgttctcaatggagaaggcactgtcca 360
           ||| |||||| |||||  |||| ||||| |||||||||||||||||||||||| ||||||
Sbjct: 647 ccaatggccccaatgggaataacagggattacctgttctcaatggagaaggcattgtcca 706

                           
Query: 361 atataagccatgaaga 376
           | ||| ||||||||||
Sbjct: 707 acatatgccatgaaga 722



to top

>dbj|AK104187.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-G08, full
           insert sequence
          Length = 1103

 Score =  389 bits (196), Expect = e-105
 Identities = 331/376 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcacgccgcagcatccggccaggacttgcacccttgaatccgaagatgaagccatatgct 60
           |||||||| ||||||| || ||||| ||||| ||||| ||||| || |||||||||||||
Sbjct: 343 gcacgccggagcatcctgcgaggacctgcacacttgagtccgacgaggaagccatatgct 402

                                                                       
Query: 61  ggggaattgcttattgtgtcaaaggtggtctagaaaaagagcgagaagcaatgcagtact 120
           |||| ||||| || ||||||||||| || ||  |||| |||| |||||||||| ||||||
Sbjct: 403 gggggattgcatactgtgtcaaaggggggcttaaaaaggagcaagaagcaatgaagtact 462

                                                                       
Query: 121 tggagagaagagaatgcgagtatgaccagaagatctctgtggatttctacaaggatggaa 180
           |||| |||||||| || |||||||||||||||||||||||||||||||||||||| ||| 
Sbjct: 463 tggaaagaagagagtgtgagtatgaccagaagatctctgtggatttctacaaggaaggag 522

                                                                       
Query: 181 attctctggaaccagctgtgacggatgtattagtattcgtatccactcctgatccagttg 240
           ||||| || | ||||||||||| | |||| |||| || |||||||||||||||||||| |
Sbjct: 523 attctttgaagccagctgtgacaggtgtactagtctttgtatccactcctgatccagtag 582

                                                                       
Query: 241 gcaacaagtactatcttggccctgctgctttggaggatatggcaaggcaaattgctacag 300
           ||||||| ||||||||||| |||||| |||||||||| ||||||||||||||||||||||
Sbjct: 583 gcaacaaatactatcttgggcctgctcctttggaggacatggcaaggcaaattgctacag 642

                                                                       
Query: 301 ccagtggccctaatggatataatagggactacctgttctcaatggagaaggcactgtcca 360
           ||| |||||| |||||  |||| ||||| |||||||||||||||||||||||| ||||||
Sbjct: 643 ccaatggccccaatgggaataacagggattacctgttctcaatggagaaggcattgtcca 702

                           
Query: 361 atataagccatgaaga 376
           | ||| ||||||||||
Sbjct: 703 acatatgccatgaaga 718



to top

>dbj|AK104503.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-F05, full
           insert sequence
          Length = 1110

 Score =  381 bits (192), Expect = e-102
 Identities = 330/376 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcacgccgcagcatccggccaggacttgcacccttgaatccgaagatgaagccatatgct 60
           |||||||| ||||||| || ||||| ||||| ||||| ||||| || |||||||||||||
Sbjct: 343 gcacgccggagcatcctgcgaggacctgcacacttgagtccgacgaggaagccatatgct 402

                                                                       
Query: 61  ggggaattgcttattgtgtcaaaggtggtctagaaaaagagcgagaagcaatgcagtact 120
           |||| || || || ||||||||||| || ||  |||| |||| |||||||||| ||||||
Sbjct: 403 gggggatggcatactgtgtcaaaggggggcttaaaaaggagcaagaagcaatgaagtact 462

                                                                       
Query: 121 tggagagaagagaatgcgagtatgaccagaagatctctgtggatttctacaaggatggaa 180
           |||| |||||||| || |||||||||||||||||||||||||||||||||||||| ||| 
Sbjct: 463 tggaaagaagagagtgtgagtatgaccagaagatctctgtggatttctacaaggaaggag 522

                                                                       
Query: 181 attctctggaaccagctgtgacggatgtattagtattcgtatccactcctgatccagttg 240
           ||||| || | ||||||||||| | |||| |||| || |||||||||||||||||||| |
Sbjct: 523 attctttgaagccagctgtgacaggtgtactagtctttgtatccactcctgatccagtag 582

                                                                       
Query: 241 gcaacaagtactatcttggccctgctgctttggaggatatggcaaggcaaattgctacag 300
           ||||||| ||||||||||| |||||| |||||||||| ||||||||||||||||||||||
Sbjct: 583 gcaacaaatactatcttgggcctgctcctttggaggacatggcaaggcaaattgctacag 642

                                                                       
Query: 301 ccagtggccctaatggatataatagggactacctgttctcaatggagaaggcactgtcca 360
           ||| |||||| |||||  |||| ||||| |||||||||||||||||||||||| ||||||
Sbjct: 643 ccaatggccccaatgggaataacagggattacctgttctcaatggagaaggcattgtcca 702

                           
Query: 361 atataagccatgaaga 376
           | ||| ||||||||||
Sbjct: 703 acatatgccatgaaga 718



to top

>dbj|AK071205.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023085D08, full
           insert sequence
          Length = 1130

 Score =  381 bits (192), Expect = e-102
 Identities = 330/376 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcacgccgcagcatccggccaggacttgcacccttgaatccgaagatgaagccatatgct 60
           |||||||| ||||||| || ||||| ||||| ||||| ||||| || |||||||||||||
Sbjct: 350 gcacgccggagcatcctgcgaggacctgcacacttgagtccgacgaggaagccatatgct 409

                                                                       
Query: 61  ggggaattgcttattgtgtcaaaggtggtctagaaaaagagcgagaagcaatgcagtact 120
           |||| ||||| || ||||||||||| || ||  |||| |||| |||||||||| ||||||
Sbjct: 410 gggggattgcatactgtgtcaaaggggggcttaaaaaggagcaagaagcaatgaagtact 469

                                                                       
Query: 121 tggagagaagagaatgcgagtatgaccagaagatctctgtggatttctacaaggatggaa 180
           |||| |||||||| || |||||||||||||||||||||||||||||||||||||| ||| 
Sbjct: 470 tggaaagaagagagtgtgagtatgaccagaagatctctgtggatttctacaaggaaggag 529

                                                                       
Query: 181 attctctggaaccagctgtgacggatgtattagtattcgtatccactcctgatccagttg 240
           | ||| || | ||||||||||| | |||| |||| || |||||||||||||||||||| |
Sbjct: 530 actctttgaagccagctgtgacaggtgtactagtctttgtatccactcctgatccagtag 589

                                                                       
Query: 241 gcaacaagtactatcttggccctgctgctttggaggatatggcaaggcaaattgctacag 300
           ||||||| ||||||||||| |||||| |||||||||| ||||||||||||||||||||||
Sbjct: 590 gcaacaaatactatcttgggcctgctcctttggaggacatggcaaggcaaattgctacag 649

                                                                       
Query: 301 ccagtggccctaatggatataatagggactacctgttctcaatggagaaggcactgtcca 360
           ||| |||||| |||||  |||| ||||| |||||||||||||||||||||||| ||||||
Sbjct: 650 ccaatggccccaatgggaataacagggattacctgttctcaatggagaaggcattgtcca 709

                           
Query: 361 atataagccatgaaga 376
           | ||| ||||||||||
Sbjct: 710 acatatgccatgaaga 725



to top

>dbj|AB112061.1| Oryza sativa (indica cultivar-group) OsCTP gene, complete cds
          Length = 741

 Score =  333 bits (168), Expect = 4e-88
 Identities = 279/316 (88%)
 Strand = Plus / Plus

                                                                       
Query: 61  ggggaattgcttattgtgtcaaaggtggtctagaaaaagagcgagaagcaatgcagtact 120
           |||| ||||| || ||||||||||| || ||  |||| |||| |||||||||| ||||||
Sbjct: 1   gggggattgcatactgtgtcaaaggggggcttaaaaaggagcaagaagcaatgaagtact 60

                                                                       
Query: 121 tggagagaagagaatgcgagtatgaccagaagatctctgtggatttctacaaggatggaa 180
           |||| |||||||| || |||||||||||||||||||||||||||||||||||||| ||| 
Sbjct: 61  tggaaagaagagagtgtgagtatgaccagaagatctctgtggatttctacaaggaaggag 120

                                                                       
Query: 181 attctctggaaccagctgtgacggatgtattagtattcgtatccactcctgatccagttg 240
           ||||| || | ||||||||||| | |||| |||| || |||||||||||||||||||| |
Sbjct: 121 attctttgaagccagctgtgacaggtgtactagtctttgtatccactcctgatccagtag 180

                                                                       
Query: 241 gcaacaagtactatcttggccctgctgctttggaggatatggcaaggcaaattgctacag 300
           ||||||| ||||||||||| |||||| |||||||||| ||||||||||||||||||||||
Sbjct: 181 gcaacaaatactatcttgggcctgctcctttggaggacatggcaaggcaaattgctacag 240

                                                                       
Query: 301 ccagtggccctaatggatataatagggactacctgttctcaatggagaaggcactgtcca 360
           ||| |||||| |||||  |||| ||||| |||||||||||||||||||||||| ||||||
Sbjct: 241 ccaatggccccaatgggaataacagggattacctgttctcaatggagaaggcattgtcca 300

                           
Query: 361 atataagccatgaaga 376
           | ||| ||||||||||
Sbjct: 301 acatatgccatgaaga 316



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  101 bits (51), Expect = 3e-18
 Identities = 63/67 (94%)
 Strand = Plus / Minus

                                                                            
Query: 108      gcaatgcagtacttggagagaagagaatgcgagtatgaccagaagatctctgtggatttc 167
                ||||| ||||||||||| |||||||| || ||||||||||||||||||||||||||||||
Sbjct: 15777266 gcaattcagtacttggaaagaagagagtgtgagtatgaccagaagatctctgtggatttc 15777207

                       
Query: 168      tacaagg 174
                |||||||
Sbjct: 15777206 tacaagg 15777200



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 64/69 (92%)
 Strand = Plus / Minus

                                                                            
Query: 219      gtatccactcctgatccagttggcaacaagtactatcttggccctgctgctttggaggat 278
                |||||||||||||||||||| |||||||| ||||||||||| |||||| |||||||||| 
Sbjct: 15776979 gtatccactcctgatccagtaggcaacaaatactatcttgggcctgctcctttggaggac 15776920

                         
Query: 279      atggcaagg 287
                |||||||||
Sbjct: 15776919 atggcaagg 15776911



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 70/77 (90%)
 Strand = Plus / Minus

                                                                            
Query: 285      aggcaaattgctacagccagtggccctaatggatataatagggactacctgttctcaatg 344
                ||||||||||||||||||| |||||| |||||  |||| ||||| |||||||||||||||
Sbjct: 15776823 aggcaaattgctacagccaatggccccaatgggaataacagggattacctgttctcaatg 15776764

                                 
Query: 345      gagaaggcactgtccaa 361
                ||||||||| |||||||
Sbjct: 15776763 gagaaggcattgtccaa 15776747



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                           
Query: 1        gcacgccgcagcatccggccaggacttgcacccttgaatccgaagatgaagccatatgc 59
                |||||||| ||||||| || ||||| ||||| ||||| ||||| || ||||||||||||
Sbjct: 15778499 gcacgccggagcatcctgcgaggacctgcacacttgagtccgacgaggaagccatatgc 15778441



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 142      atgaccagaagatctctgtggatttct 168
                ||||| |||||||||||||||||||||
Sbjct: 35851654 atgactagaagatctctgtggatttct 35851628



to top

>dbj|AP004850.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1342_D02
          Length = 125460

 Score =  101 bits (51), Expect = 3e-18
 Identities = 63/67 (94%)
 Strand = Plus / Minus

                                                                         
Query: 108   gcaatgcagtacttggagagaagagaatgcgagtatgaccagaagatctctgtggatttc 167
             ||||| ||||||||||| |||||||| || ||||||||||||||||||||||||||||||
Sbjct: 35206 gcaattcagtacttggaaagaagagagtgtgagtatgaccagaagatctctgtggatttc 35147

                    
Query: 168   tacaagg 174
             |||||||
Sbjct: 35146 tacaagg 35140



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 64/69 (92%)
 Strand = Plus / Minus

                                                                         
Query: 219   gtatccactcctgatccagttggcaacaagtactatcttggccctgctgctttggaggat 278
             |||||||||||||||||||| |||||||| ||||||||||| |||||| |||||||||| 
Sbjct: 34919 gtatccactcctgatccagtaggcaacaaatactatcttgggcctgctcctttggaggac 34860

                      
Query: 279   atggcaagg 287
             |||||||||
Sbjct: 34859 atggcaagg 34851



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 70/77 (90%)
 Strand = Plus / Minus

                                                                         
Query: 285   aggcaaattgctacagccagtggccctaatggatataatagggactacctgttctcaatg 344
             ||||||||||||||||||| |||||| |||||  |||| ||||| |||||||||||||||
Sbjct: 34763 aggcaaattgctacagccaatggccccaatgggaataacagggattacctgttctcaatg 34704

                              
Query: 345   gagaaggcactgtccaa 361
             ||||||||| |||||||
Sbjct: 34703 gagaaggcattgtccaa 34687



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                        
Query: 1     gcacgccgcagcatccggccaggacttgcacccttgaatccgaagatgaagccatatgc 59
             |||||||| ||||||| || ||||| ||||| ||||| ||||| || ||||||||||||
Sbjct: 36439 gcacgccggagcatcctgcgaggacctgcacacttgagtccgacgaggaagccatatgc 36381



to top

>gb|AC105744.8| Oryza sativa (japonica cultivar-group) chromosome 10 clone
           OSJNBb0009C07, complete sequence
          Length = 124266

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                       
Query: 220 tatccactcctgatccagttggcaacaagtactatcttggccctgctgctttggaggata 279
           ||||||||||||||||||| |||||||| ||||||||||| ||||||  | ||||||| |
Sbjct: 253 tatccactcctgatccagtaggcaacaaatactatcttgggcctgctcatatggaggaca 194

                   
Query: 280 tggcaagg 287
           | ||||||
Sbjct: 193 ttgcaagg 186



to top

>gb|AC104616.5| Oryza sativa (japonica cultivar-group) chromosome 10 clone
            OSJNBa0079H13 map E60284SA, complete sequence
          Length = 116863

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                        
Query: 220  tatccactcctgatccagttggcaacaagtactatcttggccctgctgctttggaggata 279
            ||||||||||||||||||| |||||||| ||||||||||| ||||||  | ||||||| |
Sbjct: 9698 tatccactcctgatccagtaggcaacaaatactatcttgggcctgctcatatggaggaca 9757

                    
Query: 280  tggcaagg 287
            | ||||||
Sbjct: 9758 ttgcaagg 9765



to top

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                           
Query: 220     tatccactcctgatccagttggcaacaagtactatcttggccctgctgctttggaggata 279
               ||||||||||||||||||| |||||||| ||||||||||| ||||||  | ||||||| |
Sbjct: 5781146 tatccactcctgatccagtaggcaacaaatactatcttgggcctgctcatatggaggaca 5781205

                       
Query: 280     tggcaagg 287
               | ||||||
Sbjct: 5781206 ttgcaagg 5781213



to top

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                           
Query: 220     tatccactcctgatccagttggcaacaagtactatcttggccctgctgctttggaggata 279
               ||||||||||||||||||| |||||||| ||||||||||| ||||||  | ||||||| |
Sbjct: 5782332 tatccactcctgatccagtaggcaacaaatactatcttgggcctgctcatatggaggaca 5782391

                       
Query: 280     tggcaagg 287
               | ||||||
Sbjct: 5782392 ttgcaagg 5782399



to top

>dbj|AP005290.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1282_E10
          Length = 107284

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 142   atgaccagaagatctctgtggatttct 168
             ||||| |||||||||||||||||||||
Sbjct: 42200 atgactagaagatctctgtggatttct 42174



to top

>dbj|AK119339.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-131-D05, full
            insert sequence
          Length = 2622

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 142  atgaccagaagatctctgtggatttct 168
            ||||| |||||||||||||||||||||
Sbjct: 1830 atgactagaagatctctgtggatttct 1856



to top

>gb|BT014152.1| Lycopersicon esculentum clone 133271F, mRNA sequence
          Length = 1488

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 47   tgaagccatatgctggggaat 67
            |||||||||||||||||||||
Sbjct: 1036 tgaagccatatgctggggaat 1056



to top

>ref|XM_847128.1| PREDICTED: Canis familiaris similar to CG9047-PA, isoform A
           (LOC609791), mRNA
          Length = 654

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 257 tggccctgctgctttggagga 277
           |||||||||||||||||||||
Sbjct: 4   tggccctgctgctttggagga 24



to top

>gb|AC084781.2|AC084781 Homo sapiens chromosome 15 clone RP11-355N15 map 15q21.3, complete
             sequence
          Length = 173386

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 336   ttctcaatggagaaggcactg 356
             |||||||||||||||||||||
Sbjct: 85802 ttctcaatggagaaggcactg 85782



to top

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 432     gagaagaaggttaccggctccgacg 456
               ||||||||||| |||||||||||||
Sbjct: 1270453 gagaagaaggtgaccggctccgacg 1270477



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 409     ggaaggtgctgggcaggtcg 428
               ||||||||||||||||||||
Sbjct: 1530498 ggaaggtgctgggcaggtcg 1530479



to top

>emb|AL669944.8| Mouse DNA sequence from clone RP23-388G23 on chromosome 11, complete
             sequence
          Length = 76047

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 336   ttctcaatggagaaggcactg 356
             |||||||||||||||||||||
Sbjct: 28544 ttctcaatggagaaggcactg 28524



to top

>ref|NM_191437.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 990

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 391 tgcttgcggatgaggtgagg 410
           ||||||||||||||||||||
Sbjct: 185 tgcttgcggatgaggtgagg 166



to top

>gb|BC081623.1| Danio rerio zgc:92214, mRNA (cDNA clone MGC:92214 IMAGE:7052122),
            complete cds
          Length = 1945

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 162  gatttctacaaggatggaaa 181
            ||||||||||||||||||||
Sbjct: 1295 gatttctacaaggatggaaa 1314



to top

>ref|XM_415711.1| PREDICTED: Gallus gallus similar to huntingtin interacting protein
           1 (LOC417463), mRNA
          Length = 7071

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 403 aggtgaggaaggtgctgggc 422
           ||||||||||||||||||||
Sbjct: 702 aggtgaggaaggtgctgggc 721



to top

>emb|AL033510.1|CEY40H7A Caenorhabditis elegans YAC Y40H7A, complete sequence
          Length = 86086

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 276   gatatggcaaggcaaattgctaca 299
             |||||||||||||||| |||||||
Sbjct: 21891 gatatggcaaggcaaaatgctaca 21868



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 276   gatatggcaaggcaaattgctaca 299
             |||||||||||||||| |||||||
Sbjct: 17536 gatatggcaaggcaaaatgctaca 17559



to top

>ref|XM_504397.1| Yarrowia lipolytica CLIB122, YALI0E25784g predicted mRNA
          Length = 1182

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 268 ctttggaggatatggcaaggcaaa 291
           |||||||||||||| |||||||||
Sbjct: 642 ctttggaggatatgacaaggcaaa 665



to top

>gb|AC104249.7| Homo sapiens chromosome 11, clone RP11-1084A14, complete sequence
          Length = 171265

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 475   ctccagctgtgcacatctct 494
             ||||||||||||||||||||
Sbjct: 39742 ctccagctgtgcacatctct 39723



to top

>gb|AC105908.5| Homo sapiens chromosome 11, clone RP11-636L13, complete sequence
          Length = 176485

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 475   ctccagctgtgcacatctct 494
             ||||||||||||||||||||
Sbjct: 37838 ctccagctgtgcacatctct 37857



to top

>dbj|AK122911.1| Homo sapiens cDNA FLJ16588 fis, clone TESTI4001036, highly  similar
            to Dihydropyridine-sensitive L-type, calcium channel
            beta-3 subunit
          Length = 4029

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 406  tgaggaaggtgctgggcagg 425
            ||||||||||||||||||||
Sbjct: 1052 tgaggaaggtgctgggcagg 1071



to top

>gb|AY895166.1| Gallus gallus BAC bW108010 chemokine-like ligand 1, SCYA4, chemokine
             K203, and chemokine ah294 genes, complete cds
          Length = 112034

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 403   aggtgaggaaggtgctgggc 422
             ||||||||||||||||||||
Sbjct: 14435 aggtgaggaaggtgctgggc 14416



to top

>ref|NM_070429.1| Caenorhabditis elegans Y40H7A.3 (Y40H7A.3) mRNA, complete cds
          Length = 765

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 276 gatatggcaaggcaaattgctaca 299
           |||||||||||||||| |||||||
Sbjct: 370 gatatggcaaggcaaaatgctaca 393



to top

>ref|NM_070428.1| Caenorhabditis elegans Y40H7A.2 (Y40H7A.2) mRNA, complete cds
          Length = 846

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 276 gatatggcaaggcaaattgctaca 299
           |||||||||||||||| |||||||
Sbjct: 451 gatatggcaaggcaaaatgctaca 474



to top

>emb|BX248508.10| Zebrafish DNA sequence from clone CH211-238F11 in linkage group 1,
              complete sequence
          Length = 170756

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 252    tatcttggccctgctgcttt 271
              ||||||||||||||||||||
Sbjct: 136310 tatcttggccctgctgcttt 136291



to top

>emb|AL805896.12| Mouse DNA sequence from clone RP23-402I8 on chromosome 4, complete
             sequence
          Length = 210141

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 563   agatggcattttcctctgac 582
             ||||||||||||||||||||
Sbjct: 32588 agatggcattttcctctgac 32569



to top

>gb|AC117498.6| Homo sapiens 12 BAC RP11-579D7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 144383

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 406   tgaggaaggtgctgggcagg 425
             ||||||||||||||||||||
Sbjct: 72549 tgaggaaggtgctgggcagg 72530



to top

>ref|NM_001004587.1| Danio rerio zgc:92214 (zgc:92214), mRNA
          Length = 1945

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 162  gatttctacaaggatggaaa 181
            ||||||||||||||||||||
Sbjct: 1295 gatttctacaaggatggaaa 1314



to top

>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 288    caaattgctacagccagtgg 307
              ||||||||||||||||||||
Sbjct: 770349 caaattgctacagccagtgg 770330



to top

>gb|AC118620.10| Mus musculus chromosome 3, clone RP24-571H24, complete sequence
          Length = 182926

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 533   agaagagcggcatggctgga 552
             ||||||||||||||||||||
Sbjct: 89326 agaagagcggcatggctgga 89307



to top

>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 268     ctttggaggatatggcaaggcaaa 291
               |||||||||||||| |||||||||
Sbjct: 3060195 ctttggaggatatgacaaggcaaa 3060218


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,207,915
Number of Sequences: 3902068
Number of extensions: 5207915
Number of successful extensions: 124419
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 124161
Number of HSP's gapped (non-prelim): 258
length of query: 607
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 584
effective length of database: 17,143,297,704
effective search space: 10011685859136
effective search space used: 10011685859136
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top