ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags9j09 |
|---|---|
| Clone Library Name | barley_pub |
>CV005_HUMAN (Q9Y519) Putative MAP kinase-activating protein C22orf5 (Putative| MAPK-activating protein FM08) Length = 407 Score = 78.6 bits (192), Expect = 1e-14 Identities = 50/146 (34%), Positives = 78/146 (53%), Gaps = 9/146 (6%) Frame = +3 Query: 51 QFVVVRPVCSILIIALQLIGLYPSW---VSWTF---TIILNLSVSMALYALVIFYHLFAK 212 QF VV+P+ ++ + LQ G Y V+ + TII N+SVS+ALYAL +FY + Sbjct: 179 QFCVVKPLMAVSTVVLQAFGKYRDGDFDVTSGYLYVTIIYNISVSLALYALFLFYFATRE 238 Query: 213 ELAPHKPLAKFLCIKGIVFFSFWQGCALDVLAAVGVIQSHH---FWLDVEHIQEAIQNVL 383 L+P+ P+ KF +K ++F SFWQG L +L G I H + + Q+ + Sbjct: 239 LLSPYSPVLKFFMVKSVIFLSFWQGMLLAILEKCGAIPKIHSARVSVGEGTVAAGYQDFI 298 Query: 384 IILEMVIFSVLQQYAYHVAPYSGADK 461 I +EM ++ ++A+ Y ADK Sbjct: 299 ICVEMFFAALALRHAFTYKVY--ADK 322
>CV005_MOUSE (Q8BG09) Putative MAP kinase-activating protein C22orf5 homolog| Length = 407 Score = 77.4 bits (189), Expect = 3e-14 Identities = 50/146 (34%), Positives = 79/146 (54%), Gaps = 9/146 (6%) Frame = +3 Query: 51 QFVVVRPVCSILIIALQLIGLYPSW---VSWTF---TIILNLSVSMALYALVIFYHLFAK 212 QF VV+P+ ++ + LQ G Y V+ + TII N+SVS+ALYAL +FY + Sbjct: 179 QFCVVKPLMAVSTVILQAFGKYRDGDFDVTSGYLYVTIIYNISVSLALYALFLFYFATRE 238 Query: 213 ELAPHKPLAKFLCIKGIVFFSFWQGCALDVL---AAVGVIQSHHFWLDVEHIQEAIQNVL 383 L+P+ P+ KF +K ++F SFWQG L +L A+ I S + + Q+ + Sbjct: 239 LLSPYSPVLKFFMVKSVIFLSFWQGMLLAILEKCGAIPKINSARVSVGEGTVAAGYQDFI 298 Query: 384 IILEMVIFSVLQQYAYHVAPYSGADK 461 I +EM ++ ++A+ Y ADK Sbjct: 299 ICVEMFFAALALRHAFTYKVY--ADK 322
>YAJ6_SCHPO (Q09906) Hypothetical UPF0206 protein C30D11.06c in chromosome I| Length = 426 Score = 72.0 bits (175), Expect = 1e-12 Identities = 41/139 (29%), Positives = 75/139 (53%), Gaps = 7/139 (5%) Frame = +3 Query: 51 QFVVVRPVCSILIIALQLIGLY-----PSWVSWTFTI--ILNLSVSMALYALVIFYHLFA 209 Q+ ++P I ++ ++ G+Y P + S I + N+S++++LY+L F+ Sbjct: 136 QYTWLKPFLVIAVLLTKVTGVYDREDQPVYASADLWIGLVYNISITLSLYSLTTFWVCLH 195 Query: 210 KELAPHKPLAKFLCIKGIVFFSFWQGCALDVLAAVGVIQSHHFWLDVEHIQEAIQNVLII 389 +ELAP +P KFL +K I+F S+WQ L + +G++ + + + QNVL+ Sbjct: 196 EELAPFRPFPKFLSVKAIIFASYWQQTVLSITNWLGLLNGTGWIYSLLN-----QNVLMC 250 Query: 390 LEMVIFSVLQQYAYHVAPY 446 LEM F++ YA+ + Y Sbjct: 251 LEMPFFALSHWYAFRIEDY 269
>YK31_YEAST (P36142) Hypothetical UPF0206 protein YKR051w| Length = 418 Score = 62.8 bits (151), Expect = 8e-10 Identities = 32/96 (33%), Positives = 55/96 (57%) Frame = +3 Query: 144 IILNLSVSMALYALVIFYHLFAKELAPHKPLAKFLCIKGIVFFSFWQGCALDVLAAVGVI 323 + N+SV+ +LY+L +F+ EL P+KP KFLC+K I+F S+WQ + L G + Sbjct: 173 VFYNISVTWSLYSLALFWKCLYPELTPYKPWLKFLCVKLIIFASYWQSIIIQGLVVTGKL 232 Query: 324 QSHHFWLDVEHIQEAIQNVLIILEMVIFSVLQQYAY 431 + + ++ +N L+ +EMV F++L A+ Sbjct: 233 GTGNQDRTSGYV---YKNGLLCIEMVPFAILHAVAF 265
>COX3_DROYA (P00418) Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide III) Length = 262 Score = 39.3 bits (90), Expect = 0.010 Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 4/103 (3%) Frame = +3 Query: 162 VSMALYALVIFYHLFAKELAPHKPLAKFLCIKGIVFFSFWQ----GCALDVLAAVGVIQS 329 +S L+ + F+ F L+P L GI+ F+ +Q A+ + + V V + Sbjct: 89 LSEVLFFVSFFWAFFHSSLSPAIELGASWPPMGIISFNPFQIPLLNTAILLASGVTVTWA 148 Query: 330 HHFWLDVEHIQEAIQNVLIILEMVIFSVLQQYAYHVAPYSGAD 458 HH ++ H Q +L + F++LQ Y Y AP++ AD Sbjct: 149 HHSLMESNHSQTTQGLFFTVLLGIYFTILQAYEYIEAPFTIAD 191
>COX3_ANOQU (P33508) Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide III) Length = 262 Score = 39.3 bits (90), Expect = 0.010 Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 4/119 (3%) Frame = +3 Query: 114 YPSWVSWTFTIILNLSVSMALYALVIFYHLFAKELAPHKPLAKFLCIKGIVFFSFWQ--- 284 +P + + +IL + VS + + F+ F L+P L GI+ F+ +Q Sbjct: 74 FPVTIGLRWGMILFI-VSEIFFFISFFWAFFHSSLSPTIELGMTWPPVGIIAFNPFQIPL 132 Query: 285 -GCALDVLAAVGVIQSHHFWLDVEHIQEAIQNVLIILEMVIFSVLQQYAYHVAPYSGAD 458 A+ + + V V +HH ++ H Q I+ + FS+LQ Y Y AP++ AD Sbjct: 133 LNTAILLASGVTVTWAHHALMESNHSQATQGLFFTIVLGIYFSILQAYEYIEAPFTIAD 191
>COX3_DROME (P00417) Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide III) Length = 262 Score = 38.9 bits (89), Expect = 0.013 Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 4/103 (3%) Frame = +3 Query: 162 VSMALYALVIFYHLFAKELAPHKPLAKFLCIKGIVFFSFWQ----GCALDVLAAVGVIQS 329 +S L+ + F+ F L+P L GI+ F+ +Q A+ + + V V + Sbjct: 89 LSEVLFFVSFFWAFFHSSLSPAIELGASWPPMGIISFNPFQIPLLNTAILLASGVTVTWA 148 Query: 330 HHFWLDVEHIQEAIQNVLIILEMVIFSVLQQYAYHVAPYSGAD 458 HH ++ H Q +L + F++LQ Y Y AP++ AD Sbjct: 149 HHSLMENNHSQTTQGLFFTVLLGIYFTILQAYEYIEAPFTIAD 191
>COX3_ANOGA (P34842) Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide III) Length = 262 Score = 37.4 bits (85), Expect = 0.038 Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 4/119 (3%) Frame = +3 Query: 114 YPSWVSWTFTIILNLSVSMALYALVIFYHLFAKELAPHKPLAKFLCIKGIVFFSFWQ--- 284 +P + + +IL + VS + + F+ F L+P L GI F+ +Q Sbjct: 74 FPVTIGLRWGMILFI-VSEVFFFISFFWAFFHSSLSPTIELGMTWPPVGIAAFNPFQIPL 132 Query: 285 -GCALDVLAAVGVIQSHHFWLDVEHIQEAIQNVLIILEMVIFSVLQQYAYHVAPYSGAD 458 A+ + + V V +HH ++ H Q I+ V F++LQ Y Y AP++ AD Sbjct: 133 LNTAILLASGVTVTWAHHALMEGNHSQATQGLFFTIVLGVYFTILQAYEYIEAPFTIAD 191
>COX3_CHOCR (P48872) Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide III) Length = 272 Score = 34.7 bits (78), Expect = 0.24 Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 4/111 (3%) Frame = +3 Query: 138 FTIILNLSVSMALYALVIFYHLFAKELAPHKPLAKFLCIKGIVFFSFWQGCALD----VL 305 F +IL + +S L+ F+ F LAP + KGI + W+ L+ +L Sbjct: 91 FGVILFI-ISEILFFFAFFWAFFHSSLAPTIEIGSIWPPKGINVLNPWEIPFLNTLILLL 149 Query: 306 AAVGVIQSHHFWLDVEHIQEAIQNVLIILEMVIFSVLQQYAYHVAPYSGAD 458 + V HH + Q + L I+ ++F+ Q Y Y +A + +D Sbjct: 150 SGCTVTWCHHSLVSNLRNQSVLSLFLTIVLAIVFTTFQAYEYSMADFRLSD 200
>COX3_CYACA (P48873) Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide III) Length = 270 Score = 32.7 bits (73), Expect = 0.93 Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 4/104 (3%) Frame = +3 Query: 165 SMALYALVIFYHLFAKELAPHKPLAKFLCIKGIVFFSFWQGCALD----VLAAVGVIQSH 332 S + + F+ F L P KGI FFS W L+ +L+ V SH Sbjct: 97 SEVILFIAFFWAFFHNSLIPALETGVVWPPKGIQFFSPWDIPFLNTIILLLSGCAVTWSH 156 Query: 333 HFWLDVEHIQEAIQNVLIILEMVIFSVLQQYAYHVAPYSGADKA 464 + + Q +L I +IF++ Q Y Y +A + +D A Sbjct: 157 NCIISGFRRQAIFSLILTIGLALIFTIFQIYEYAIASFHLSDGA 200
>COX3_PODAN (Q02654) Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide III) Length = 269 Score = 32.3 bits (72), Expect = 1.2 Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 4/105 (3%) Frame = +3 Query: 162 VSMALYALVIFYHLFAKELAPHKPLAKFLCIKGIVFFSFWQGCALDVLAAVG----VIQS 329 VS AL+ L IF+ F L P L GI + ++ L+ + + V + Sbjct: 96 VSEALFFLAIFWAFFHSSLTPTVELGSQWPPIGIEPINPFELPLLNTVILLSSGATVTYA 155 Query: 330 HHFWLDVEHIQEAIQNVLIILEMVIFSVLQQYAYHVAPYSGADKA 464 HH + E +++ IL +IF+V Q Y+V+ ++ +D A Sbjct: 156 HHSLIHGERKGALYGSIITILLAIIFTVFQGVEYNVSSFTISDGA 200
>COX3_PROWI (Q37620) Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide III) Length = 262 Score = 32.3 bits (72), Expect = 1.2 Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 4/103 (3%) Frame = +3 Query: 162 VSMALYALVIFYHLFAKELAPHKPLAKFLCIKGIVFFSFWQGCALDVL----AAVGVIQS 329 +S ++ F+ F LAP + KGI + W+ L+ + + V + Sbjct: 88 LSEIMFFFAFFWAFFHSSLAPTIEIGAVWPPKGIQVLNPWEIPFLNTIILLTSGASVTWA 147 Query: 330 HHFWLDVEHIQEAIQNVLIILEMVIFSVLQQYAYHVAPYSGAD 458 HH L Q I + +L VIF+ Q Y AP++ +D Sbjct: 148 HHAILAGNRKQGIISLAITVLLAVIFTGFQALEYLEAPFTISD 190
>COX3_WHEAT (P15953) Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide III) Length = 265 Score = 32.3 bits (72), Expect = 1.2 Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 4/103 (3%) Frame = +3 Query: 162 VSMALYALVIFYHLFAKELAPHKPLAKFLCIKGIVFFSFWQGCALDVL----AAVGVIQS 329 VS ++ F+ F LAP + KGI W+ L+ L + V + Sbjct: 91 VSEVMFFFAFFWAFFHSSLAPTVEIGGIWPPKGIGVLDPWEIPLLNTLILLSSGAAVTWA 150 Query: 330 HHFWLDVEHIQEAIQNVLIILEMVIFSVLQQYAYHVAPYSGAD 458 HH L + + V +L ++F+ Q Y+ AP++ +D Sbjct: 151 HHAILAGKEKRAVYALVATVLLALVFTGFQGMEYYQAPFTISD 193
>COX3_ARATH (P92514) Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide III) Length = 265 Score = 32.3 bits (72), Expect = 1.2 Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 4/103 (3%) Frame = +3 Query: 162 VSMALYALVIFYHLFAKELAPHKPLAKFLCIKGIVFFSFWQGCALDVL----AAVGVIQS 329 VS ++ F+ F LAP + KGI W+ L+ L + V + Sbjct: 91 VSEVMFFFAFFWAFFHSSLAPAVEIGGIWPPKGIEVLDPWEIPFLNTLILLSSGAAVTWA 150 Query: 330 HHFWLDVEHIQEAIQNVLIILEMVIFSVLQQYAYHVAPYSGAD 458 HH L + + V +L ++F+ Q Y+ AP++ +D Sbjct: 151 HHAILAGKEKRAVYALVATVLLALVFTGFQGMEYYQAPFTISD 193
>TRIB2_HUMAN (Q92519) Tribbles homolog 2 (TRB-2)| Length = 343 Score = 32.0 bits (71), Expect = 1.6 Identities = 14/31 (45%), Positives = 20/31 (64%) Frame = -2 Query: 529 QEPAADVAWHEALDHSFFFTDFALSAPLYGA 437 +EP+ + E LDH +F TDF++S YGA Sbjct: 291 REPSERLTSQEILDHPWFSTDFSVSNSAYGA 321
>DNAE2_RALSO (Q8XRN1) Error-prone DNA polymerase (EC 2.7.7.7)| Length = 1075 Score = 32.0 bits (71), Expect = 1.6 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +2 Query: 314 RGDSVSPFLAGRGAHPGGNPECLDYPG 394 +G V P+L R A GNP+C+ YPG Sbjct: 645 QGGMVHPYLQRREAVRNGNPDCVTYPG 671
>COX3_LOCMI (P14574) Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide III) Length = 263 Score = 32.0 bits (71), Expect = 1.6 Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 5/103 (4%) Frame = +3 Query: 165 SMALYALVIFYHLFAKELAPHKPLAKFLCIKGIVFFSFWQ----GCALDVLAAVGVIQSH 332 S L+ F+ F LAP L GI F+ Q A+ + + V + +H Sbjct: 91 SEVLFFASFFWAFFNSSLAPTIELGMKWPPMGIQPFNPIQIPLLNTAILLASGVTITWAH 150 Query: 333 HFWLDVEHIQEAIQNVLIILEM-VIFSVLQQYAYHVAPYSGAD 458 H ++ H Q A+Q + + + F++LQ Y Y AP++ AD Sbjct: 151 HSIMECNHSQ-ALQGLFFTVMLGFYFTLLQMYEYWEAPFTIAD 192
>YLAA_BACSU (O07625) Hypothetical protein ylaA| Length = 646 Score = 31.6 bits (70), Expect = 2.1 Identities = 15/64 (23%), Positives = 36/64 (56%) Frame = +3 Query: 81 ILIIALQLIGLYPSWVSWTFTIILNLSVSMALYALVIFYHLFAKELAPHKPLAKFLCIKG 260 I+ + + L+ YP+ +S + ++ ++ +A+ ++ YHLF K + + K++ + Sbjct: 197 IIGLLVLLLAPYPNQISKDYGAVMPYTIYLAMAGFLMSYHLFQKSGKVYVRVNKWVTMAV 256 Query: 261 IVFF 272 +VFF Sbjct: 257 MVFF 260
>NOP10_METKA (Q8TY85) Ribosome biogenesis protein Nop10| Length = 66 Score = 31.2 bits (69), Expect = 2.7 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = -1 Query: 236 KRLVRCQLLGKQVIENDQGIQCHGD*QVQY-NCERPTDPAGVQPNKLK 96 KRL RC+ G+ ++ D+ C GD +V + + P DP G KLK Sbjct: 3 KRLRRCKECGEYTLQRDKCPHCGGDLEVPHPHRFSPEDPYGKYRRKLK 50
>TRIB2_PONPY (Q5R669) Tribbles homolog 2 (TRB-2)| Length = 343 Score = 30.8 bits (68), Expect = 3.5 Identities = 14/31 (45%), Positives = 20/31 (64%) Frame = -2 Query: 529 QEPAADVAWHEALDHSFFFTDFALSAPLYGA 437 +EP+ + E LDH +F TDF++S YGA Sbjct: 291 REPSERLTSQEILDHPWFSTDFSVSNSGYGA 321
>TRIB2_CANFA (Q28283) Tribbles homolog 2 (TRB-2)| Length = 343 Score = 30.8 bits (68), Expect = 3.5 Identities = 14/31 (45%), Positives = 20/31 (64%) Frame = -2 Query: 529 QEPAADVAWHEALDHSFFFTDFALSAPLYGA 437 +EP+ + E LDH +F TDF++S YGA Sbjct: 291 REPSERLTSQEILDHPWFSTDFSVSNSGYGA 321
>TRIB2_BOVIN (Q5GLH2) Tribbles homolog 2 (TRB-2)| Length = 343 Score = 30.8 bits (68), Expect = 3.5 Identities = 14/31 (45%), Positives = 20/31 (64%) Frame = -2 Query: 529 QEPAADVAWHEALDHSFFFTDFALSAPLYGA 437 +EP+ + E LDH +F TDF++S YGA Sbjct: 291 REPSERLTSQEILDHPWFSTDFSVSNSGYGA 321
>UCHL1_PIG (Q6SEG5) Ubiquitin carboxyl-terminal hydrolase isozyme L1 (EC| 3.4.19.12) (EC 6.-.-.-) (UCH-L1) (Ubiquitin thioesterase L1) Length = 223 Score = 30.8 bits (68), Expect = 3.5 Identities = 20/57 (35%), Positives = 28/57 (49%) Frame = +3 Query: 366 AIQNVLIILEMVIFSVLQQYAYHVAPYSGADKAKSVKKNE*SRASCQATSAAGSCMV 536 A+ N LE SVL+Q+ S D+AK +KNE +A+ A + G C V Sbjct: 98 AVANNQDKLEFEDGSVLKQFLSETEKLSPEDRAKCFEKNEAIQAAHDAVAQEGQCRV 154
>UCHL1_HORSE (Q9GM50) Ubiquitin carboxyl-terminal hydrolase isozyme L1 (EC| 3.4.19.12) (EC 6.-.-.-) (UCH-L1) (Ubiquitin thioesterase L1) (Neuron cytoplasmic protein 9.5) (PGP 9.5) (PGP9.5) Length = 223 Score = 30.8 bits (68), Expect = 3.5 Identities = 20/57 (35%), Positives = 28/57 (49%) Frame = +3 Query: 366 AIQNVLIILEMVIFSVLQQYAYHVAPYSGADKAKSVKKNE*SRASCQATSAAGSCMV 536 A+ N LE SVL+Q+ S D+AK +KNE +A+ A + G C V Sbjct: 98 AVANNQDKLEFEDGSVLKQFLSETEKLSPEDRAKCFEKNEAIQAAHDAVAQEGQCRV 154
>ISPE_XYLFT (Q87A21) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC| 2.7.1.148) (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) Length = 298 Score = 30.4 bits (67), Expect = 4.6 Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 3/46 (6%) Frame = +2 Query: 317 GDSVSPFLAGRGAHPGGNPECLD---YPGNGHLLGTPAVCVPCRSV 445 G V F+ G A G ECL PG +LL P VCVP R + Sbjct: 149 GADVPVFVHGCNAWAEGVGECLTPMILPGAAYLLLDPGVCVPTREL 194
>ISPE_XYLFA (Q9PA75) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC| 2.7.1.148) (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) Length = 298 Score = 30.4 bits (67), Expect = 4.6 Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 3/46 (6%) Frame = +2 Query: 317 GDSVSPFLAGRGAHPGGNPECLD---YPGNGHLLGTPAVCVPCRSV 445 G V F+ G A G ECL PG +LL P VCVP R + Sbjct: 149 GADVPVFVHGCNAWAEGVGECLTPMILPGAAYLLLDPGVCVPTREL 194
>COX3_TETNG (Q4JQI1) Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide III) Length = 261 Score = 30.4 bits (67), Expect = 4.6 Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 4/102 (3%) Frame = +3 Query: 165 SMALYALVIFYHLFAKELAPHKPLAKFLCIKGIVFFSFWQ----GCALDVLAAVGVIQSH 332 S + L F+ + LAP L GIV + ++ A+ + + V V +H Sbjct: 89 SEVFFFLGFFWAFYHSSLAPTPELGGCWPPTGIVPLNPFEVPLLNTAVLLASGVTVTWAH 148 Query: 333 HFWLDVEHIQEAIQNVLIILEMVIFSVLQQYAYHVAPYSGAD 458 H ++ E Q L IL F+ LQ Y+ AP++ AD Sbjct: 149 HSIMEGERKQAIHSLTLTILLGFYFTFLQAMEYYEAPFTIAD 190
>O10J3_HUMAN (Q5JRS4) Olfactory receptor 10J3| Length = 329 Score = 30.4 bits (67), Expect = 4.6 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = +3 Query: 156 LSVSMALYALVIFYHLFAKELAPHKPLAKFLCIKGIVFF 272 LS+S Y + I H+ + L PH+P+A C + F+ Sbjct: 67 LSISETCYTVAIIPHMLSGLLNPHQPIATQSCATQLFFY 105
>RNBP6_HUMAN (O60518) Ran-binding protein 6 (RanBP6)| Length = 1105 Score = 30.0 bits (66), Expect = 6.0 Identities = 18/82 (21%), Positives = 39/82 (47%) Frame = -1 Query: 539 QNHTRTSCRCRLARSPGSFVLLHRFRLVSAAVRSDMVRILLEYREDDHFQDNQDILDCLL 360 Q+ + R AR+ +FVL + + +D++ +L+ D +QD+ +L+ L+ Sbjct: 190 QDQEHPAIRTLSARAAAAFVLANENNIALFKDFADLLPGILQAVNDSCYQDDDSVLESLV 249 Query: 359 DVLHVQPEMVRLNHPYSSQNIQ 294 ++ P+ + PY +Q Sbjct: 250 EIADTVPKYL---GPYLEDTLQ 268
>LEP4_LEGPN (O68433) Type 4 prepilin-like proteins leader peptide-processing| enzyme [Includes: Leader peptidase (EC 3.4.23.43) (Prepilin peptidase); N-methyltransferase (EC 2.1.1.-)] Length = 287 Score = 30.0 bits (66), Expect = 6.0 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Frame = +3 Query: 99 QLIGLYPSWVSWTFT--IILNLSVSMALYALVIFYHLFAKELAPHKPLAKFLCIKGIVFF 272 +L + +W+ W + I+L S++ A+ L I+ + K P FLCI G++ Sbjct: 214 KLFAAFGAWLGWMYLPIILLISSITGAIIGL-IYLKINGKSRDTAIPFGPFLCISGLIAM 272 Query: 273 SFW 281 FW Sbjct: 273 -FW 274
>COX3_BRALA (P69215) Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide III) Length = 262 Score = 30.0 bits (66), Expect = 6.0 Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 5/104 (4%) Frame = +3 Query: 162 VSMALYALVIFYHLFAKELAPHKPLAKFLCIKGI----VFFSFWQGCALDVLAAVGVIQS 329 VS + L F+ F LAP L G+ F A+ + + V V + Sbjct: 89 VSEVFFFLAFFWAFFHSSLAPTVELGVTWPPVGVHPLNAFAVPLLNTAVLLSSGVTVTWA 148 Query: 330 HHFWLDVEHIQEAIQNVLIILEM-VIFSVLQQYAYHVAPYSGAD 458 HH ++ + EAIQ++ I + + + F+ LQ + Y+ AP++ AD Sbjct: 149 HHALMEGKRT-EAIQSLAITVMLGLYFTGLQAWEYYEAPFTIAD 191
>COX3_BRAFL (P69216) Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide III) Length = 262 Score = 30.0 bits (66), Expect = 6.0 Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 5/104 (4%) Frame = +3 Query: 162 VSMALYALVIFYHLFAKELAPHKPLAKFLCIKGI----VFFSFWQGCALDVLAAVGVIQS 329 VS + L F+ F LAP L G+ F A+ + + V V + Sbjct: 89 VSEVFFFLAFFWAFFHSSLAPTVELGVTWPPVGVHPLNAFAVPLLNTAVLLSSGVTVTWA 148 Query: 330 HHFWLDVEHIQEAIQNVLIILEM-VIFSVLQQYAYHVAPYSGAD 458 HH ++ + EAIQ++ I + + + F+ LQ + Y+ AP++ AD Sbjct: 149 HHALMEGKRT-EAIQSLAITVMLGLYFTGLQAWEYYEAPFTIAD 191
>COX3_BRARE (Q9MIY4) Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide III) Length = 261 Score = 30.0 bits (66), Expect = 6.0 Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 4/102 (3%) Frame = +3 Query: 165 SMALYALVIFYHLFAKELAPHKPLAKFLCIKGIVFFSFWQ----GCALDVLAAVGVIQSH 332 S + L F+ + LAP L G+ ++ A+ + + V V +H Sbjct: 89 SEVFFFLGFFWAFYHSSLAPTPELGGCWPPTGLTTLDPFEVPLLNTAVLLASGVTVTWAH 148 Query: 333 HFWLDVEHIQEAIQNVLIILEMVIFSVLQQYAYHVAPYSGAD 458 H ++ E Q L IL + F+ LQ Y+ AP++ AD Sbjct: 149 HSLMEGERKQAIQSLALTILLGLYFTALQAMEYYEAPFTIAD 190
>UCHL1_MACFA (Q60HC8) Ubiquitin carboxyl-terminal hydrolase isozyme L1 (EC| 3.4.19.12) (EC 6.-.-.-) (UCH-L1) (Ubiquitin thioesterase L1) Length = 223 Score = 30.0 bits (66), Expect = 6.0 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = +3 Query: 408 SVLQQYAYHVAPYSGADKAKSVKKNE*SRASCQATSAAGSCMV 536 SVL+Q+ S D+AK +KNE +A+ A + G C V Sbjct: 112 SVLKQFLSETEKMSPEDRAKCFEKNEAIQAAHDAVAQEGQCRV 154
>UCHL1_HUMAN (P09936) Ubiquitin carboxyl-terminal hydrolase isozyme L1 (EC| 3.4.19.12) (EC 6.-.-.-) (UCH-L1) (Ubiquitin thioesterase L1) (Neuron cytoplasmic protein 9.5) (PGP 9.5) (PGP9.5) Length = 223 Score = 30.0 bits (66), Expect = 6.0 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = +3 Query: 408 SVLQQYAYHVAPYSGADKAKSVKKNE*SRASCQATSAAGSCMV 536 SVL+Q+ S D+AK +KNE +A+ A + G C V Sbjct: 112 SVLKQFLSETEKMSPEDRAKCFEKNEAIQAAHDAVAQEGQCRV 154
>PCLO_CHICK (Q9PU36) Protein piccolo (Aczonin) (Fragment)| Length = 5120 Score = 30.0 bits (66), Expect = 6.0 Identities = 34/123 (27%), Positives = 50/123 (40%), Gaps = 1/123 (0%) Frame = -3 Query: 534 PYKNQLQMSLGTKPWIIRSSSQISPCQRRCTERHGTHTAGVPRR*PFPG*SRHSG-LPPG 358 P K+QLQ S TKP ++S++ S T +P++ P ++ S PP Sbjct: 188 PQKSQLQQSEPTKPGQQQTSAKTS----------AGPTKPLPQQ---PDSAKTSSQAPPP 234 Query: 357 CAPRPARNGETESPLQQPKHPAHSPARKRRRQSL*CTRTSQEACEVPTPWQTSDRK*PRH 178 P ++G + P QQP P + +Q+ Q E PT QT K P Sbjct: 235 TKPSLQQSGSVKQPSQQPARQG-GPVKPSAQQA--GPPKQQPGSEKPTAQQTGPAKQPPQ 291 Query: 177 TVP 169 P Sbjct: 292 PGP 294
>COX3_SPOFR (Q35826) Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide III) (Fragment) Length = 147 Score = 29.6 bits (65), Expect = 7.9 Identities = 15/53 (28%), Positives = 28/53 (52%) Frame = +3 Query: 300 VLAAVGVIQSHHFWLDVEHIQEAIQNVLIILEMVIFSVLQQYAYHVAPYSGAD 458 + + V V +HH ++ + Q + I+ + F++LQ Y Y AP++ AD Sbjct: 24 ISSGVSVTWAHHAIMENNNSQMTQGLFITIILGIYFTILQAYEYFEAPFTIAD 76
>MTM6_METJA (Q58606) Modification methylase MjaVI (EC 2.1.1.113) (N-4| cytosine-specific methyltransferase MjaVI) (M.MjaVI) Length = 194 Score = 29.6 bits (65), Expect = 7.9 Identities = 15/45 (33%), Positives = 23/45 (51%) Frame = -3 Query: 579 PYNILNQYSQHIHTKPYKNQLQMSLGTKPWIIRSSSQISPCQRRC 445 PYN+ Y+QH T PY+ L TK W+ ++ + + R C Sbjct: 40 PYNVGIDYNQHDDTIPYEEYLDW---TKQWLKKALTLLKKDGRLC 81
>COX3_CYPCA (P15952) Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide III) Length = 261 Score = 29.6 bits (65), Expect = 7.9 Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 4/102 (3%) Frame = +3 Query: 165 SMALYALVIFYHLFAKELAPHKPLAKFLCIKGIVFFSFWQ----GCALDVLAAVGVIQSH 332 S + L F+ + LAP L GI ++ A+ + + V V +H Sbjct: 89 SEVFFFLGFFWAFYHSSLAPTPELGGCWPPTGITPLDPFEVPLLNTAVLLASGVTVTWAH 148 Query: 333 HFWLDVEHIQEAIQNVLIILEMVIFSVLQQYAYHVAPYSGAD 458 H ++ E Q L IL + F+ LQ Y+ AP++ AD Sbjct: 149 HSIMEGERKQAIQSLALTILLGLYFTALQAMEYYEAPFTIAD 190
>UCHL1_RAT (Q00981) Ubiquitin carboxyl-terminal hydrolase isozyme L1 (EC| 3.4.19.12) (EC 6.-.-.-) (UCH-L1) (Ubiquitin thioesterase L1) (Neuron cytoplasmic protein 9.5) (PGP 9.5) (PGP9.5) Length = 223 Score = 29.6 bits (65), Expect = 7.9 Identities = 19/57 (33%), Positives = 28/57 (49%) Frame = +3 Query: 366 AIQNVLIILEMVIFSVLQQYAYHVAPYSGADKAKSVKKNE*SRASCQATSAAGSCMV 536 A+ N LE SVL+Q+ S D+AK +KNE +A+ + + G C V Sbjct: 98 AVANNQDKLEFEDGSVLKQFLSETEKLSPEDRAKCFEKNEAIQAAHDSVAQEGQCRV 154
>UCHL1_MOUSE (Q9R0P9) Ubiquitin carboxyl-terminal hydrolase isozyme L1 (EC| 3.4.19.12) (EC 6.-.-.-) (UCH-L1) (Ubiquitin thioesterase L1) (Neuron cytoplasmic protein 9.5) (PGP 9.5) (PGP9.5) Length = 223 Score = 29.6 bits (65), Expect = 7.9 Identities = 19/57 (33%), Positives = 28/57 (49%) Frame = +3 Query: 366 AIQNVLIILEMVIFSVLQQYAYHVAPYSGADKAKSVKKNE*SRASCQATSAAGSCMV 536 A+ N LE SVL+Q+ S D+AK +KNE +A+ + + G C V Sbjct: 98 AVANNQDKLEFEDGSVLKQFLSETEKLSPEDRAKCFEKNEAIQAAHDSVAQEGQCRV 154 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,226,911 Number of Sequences: 219361 Number of extensions: 2187217 Number of successful extensions: 7373 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 6919 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7355 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5938641176 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
