>gb|AC113317.8| Mus musculus chromosome 5, clone RP23-442G8, complete sequence
          Length = 193961

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 198   aaaaagaatgacactctgtctattcttt 225
             ||||||||||||||||| ||||||||||
Sbjct: 51062 aaaaagaatgacactctttctattcttt 51035

>gb|AC115823.18| Mus musculus chromosome 5, clone RP23-422P4, complete sequence
          Length = 185311

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 181   ctaccttttggggaggaaaaaa 202
             ||||||||||||||||||||||
Sbjct: 25139 ctaccttttggggaggaaaaaa 25160

>gb|AC115901.8| Mus musculus chromosome 5, clone RP24-465E5, complete sequence
          Length = 219828

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 181    ctaccttttggggaggaaaaaa 202
              ||||||||||||||||||||||
Sbjct: 215384 ctaccttttggggaggaaaaaa 215405

>emb|BX649356.19| Zebrafish DNA sequence from clone CH211-209H5 in linkage group 3,
              complete sequence
          Length = 200759

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 113    gtgggtggtgttgtgtcaaactgaa 137
              |||||||||||||| ||||||||||
Sbjct: 157451 gtgggtggtgttgtctcaaactgaa 157427

>gb|AC073166.7| Oryza sativa chromosome 10 BAC OSJNBb0064P21 genomic sequence, complete
             sequence
          Length = 142114

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1     actgctgttgtgcttgtttgg 21
             |||||||||||||||||||||
Sbjct: 56532 actgctgttgtgcttgtttgg 56512

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 1        actgctgttgtgcttgtttgg 21
                |||||||||||||||||||||
Sbjct: 20551242 actgctgttgtgcttgtttgg 20551222

>emb|Z73898.1|CEZK822 Caenorhabditis elegans Cosmid ZK822, complete sequence
          Length = 25970

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 332   attttcagatgcaaaatgttccagaaaat 360
             |||||||||| |||||| |||||||||||
Sbjct: 22490 attttcagattcaaaattttccagaaaat 22518



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 280   attttcagatgcaaaatgttccagaaaat 308
             |||||||||| |||||| |||||||||||
Sbjct: 22490 attttcagattcaaaattttccagaaaat 22518

>gb|L49432.1|HUMSCPB Homo sapiens TNFR2-TRAF signalling complex protein mRNA, complete cds
          Length = 2563

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 401  ggaaaccaaattaggatgaaa 421
            |||||||||||||||||||||
Sbjct: 2020 ggaaaccaaattaggatgaaa 2000

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 1        actgctgttgtgcttgtttgg 21
                |||||||||||||||||||||
Sbjct: 20562514 actgctgttgtgcttgtttgg 20562494

>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 78      gcgaaactcgcctgtatcgagctg 101
               |||||||||||||||| |||||||
Sbjct: 1068523 gcgaaactcgcctgtagcgagctg 1068546

>gb|AC003057.1| Mouse Cosmid ma08m030 from 14D1-D2, complete sequence
          Length = 33608

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 432   ttgtgaatatatatattgaa 451
             ||||||||||||||||||||
Sbjct: 21982 ttgtgaatatatatattgaa 22001

>gb|AC122669.6| Rattus norvegicus 4 BAC CH230-172C22 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 227955

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    ttgtttggtggatgttctgg 33
             ||||||||||||||||||||
Sbjct: 62690 ttgtttggtggatgttctgg 62671

>gb|AC132901.11| Mus musculus chromosome 13, clone RP24-282A18, complete sequence
          Length = 187090

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     tgctgttgtgcttgtttggt 22
             ||||||||||||||||||||
Sbjct: 21889 tgctgttgtgcttgtttggt 21870

>gb|AC129203.4| Mus musculus BAC clone RP24-225M1 from chromosome 16, complete sequence
          Length = 152208

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    tgtaacatgaagaagaaatg 62
             ||||||||||||||||||||
Sbjct: 37850 tgtaacatgaagaagaaatg 37831

>gb|AC135238.4| Mus musculus BAC clone RP23-314I1 from chromosome 3, complete sequence
          Length = 247498

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 184    ccttttggggaggaaaaaag 203
              ||||||||||||||||||||
Sbjct: 112894 ccttttggggaggaaaaaag 112913

>gb|AC132454.3| Mus musculus BAC clone RP23-127P22 from chromosome 19, complete
             sequence
          Length = 225152

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 216   tctattcttttgaatttaat 235
             ||||||||||||||||||||
Sbjct: 23654 tctattcttttgaatttaat 23635

>gb|AC018541.7| Homo sapiens chromosome 8, clone RP11-108E14, complete sequence
          Length = 156674

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 270   gacactttaaattttcagat 289
             ||||||||||||||||||||
Sbjct: 88619 gacactttaaattttcagat 88600

>emb|Z66515.1|CER53 Caenorhabditis elegans Cosmid R53, complete sequence
          Length = 35240

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 213   ctgtctattcttttgaattt 232
             ||||||||||||||||||||
Sbjct: 10756 ctgtctattcttttgaattt 10737

>gb|AC122038.3| Mus musculus BAC clone RP24-427G24 from chromosome 3, complete sequence
          Length = 188751

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 184   ccttttggggaggaaaaaag 203
             ||||||||||||||||||||
Sbjct: 30025 ccttttggggaggaaaaaag 30044

>gb|AC121893.3| Mus musculus BAC clone RP24-157C12 from chromosome 16, complete
             sequence
          Length = 137384

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 275   tttaaattttcagatgcaaa 294
             ||||||||||||||||||||
Sbjct: 95043 tttaaattttcagatgcaaa 95062



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 327   tttaaattttcagatgcaaa 346
             ||||||||||||||||||||
Sbjct: 95043 tttaaattttcagatgcaaa 95062

>gb|AC165347.4| Mus musculus BAC clone RP23-348B21 from chromosome 13, complete
             sequence
          Length = 205783

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     tgctgttgtgcttgtttggt 22
             ||||||||||||||||||||
Sbjct: 13436 tgctgttgtgcttgtttggt 13455

>emb|AL360179.8| Human DNA sequence from clone RP11-145B3 on chromosome Xq13.1-13.3
             Contains the 5' end of the ABCB7 gene for ATP-binding
             cassette sub-family B (MDR/TAP) member 7 and an
             endothelial differentiation, lysophosphatidic acid
             G-protein-coupled receptor, 2 (EDG2) pseudogene, complete
             sequence
          Length = 159215

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 184   ccttttggggaggaaaaaag 203
             ||||||||||||||||||||
Sbjct: 26688 ccttttggggaggaaaaaag 26669

>emb|AL031679.1|HS836E8 Human DNA sequence from clone RP5-836E8 on chromosome 20p12 Contains a
             FUSIP1 pseudogene (pFUSIP1) and a CpG island, complete
             sequence
          Length = 119296

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 272   cactttaaattttcagatgcaaaa 295
             |||||||||||||| |||||||||
Sbjct: 85608 cactttaaattttctgatgcaaaa 85631

>gb|AC009320.7| Homo sapiens 12 BAC RP11-310I24 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 57166

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   tttaatgttccttgctattt 249
             ||||||||||||||||||||
Sbjct: 50028 tttaatgttccttgctattt 50009

>emb|BX324148.9| Zebrafish DNA sequence from clone RP71-17G11 in linkage group 23,
             complete sequence
          Length = 127356

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 189   tggggaggaaaaaagaatga 208
             ||||||||||||||||||||
Sbjct: 59861 tggggaggaaaaaagaatga 59842

>emb|BX571850.7| Zebrafish DNA sequence from clone DKEY-259L18 in linkage group 23,
             complete sequence
          Length = 236136

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 189   tggggaggaaaaaagaatga 208
             ||||||||||||||||||||
Sbjct: 52288 tggggaggaaaaaagaatga 52307

>gb|AC116662.1| Rattus norvegicus, clone RP31-256A2, complete sequence
          Length = 112570

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    ttgtttggtggatgttctgg 33
             ||||||||||||||||||||
Sbjct: 52557 ttgtttggtggatgttctgg 52576

>dbj|AP007174.1| Aspergillus oryzae RIB40 genomic DNA, SC103
          Length = 1282697

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 438     atatatatattgaaactata 457
               ||||||||||||||||||||
Sbjct: 1182011 atatatatattgaaactata 1181992

>gb|AC021955.11| Homo sapiens chromosome 8, clone RP11-238G17, complete sequence
          Length = 192139

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 270    gacactttaaattttcagat 289
              ||||||||||||||||||||
Sbjct: 160889 gacactttaaattttcagat 160908

>gb|AC159911.7| Mus musculus 10 BAC RP23-465M5 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 203420

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 277   taaattttcagatgcaaaat 296
             ||||||||||||||||||||
Sbjct: 94468 taaattttcagatgcaaaat 94449



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 329   taaattttcagatgcaaaat 348
             ||||||||||||||||||||
Sbjct: 94468 taaattttcagatgcaaaat 94449

>gb|AE008686.1|AE008686 Mus musculus T-cell receptor alpha/delta locus  section 4 of 4 of the
              complete region
          Length = 461875

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 432    ttgtgaatatatatattgaa 451
              ||||||||||||||||||||
Sbjct: 310838 ttgtgaatatatatattgaa 310857

>gb|AC155308.2| Mus musculus BAC clone RP24-150P15 from chromosome 13, complete
             sequence
          Length = 132564

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     actgctgttgtgcttgtttg 20
             ||||||||||||||||||||
Sbjct: 94447 actgctgttgtgcttgtttg 94428

>emb|AL110500.1|CEY87G2A Caenorhabditis elegans YAC Y87G2A, complete sequence
          Length = 123091

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 292   aaaatgttccagaaaatcac 311
             ||||||||||||||||||||
Sbjct: 43574 aaaatgttccagaaaatcac 43555



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 344   aaaatgttccagaaaatcac 363
             ||||||||||||||||||||
Sbjct: 43574 aaaatgttccagaaaatcac 43555

>dbj|AP003043.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-617B3, complete
              sequence
          Length = 180648

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 344    aaaatgttccagaaaatcac 363
              ||||||||||||||||||||
Sbjct: 102775 aaaatgttccagaaaatcac 102794



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 292    aaaatgttccagaaaatcac 311
              ||||||||||||||||||||
Sbjct: 102775 aaaatgttccagaaaatcac 102794

>emb|CR855277.16| Zebrafish DNA sequence from clone DKEY-71B5 in linkage group 16,
             complete sequence
          Length = 245559

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 219   attcttttgaatttaatgtt 238
             ||||||||||||||||||||
Sbjct: 84666 attcttttgaatttaatgtt 84685

>gb|AC147473.3| Mus musculus BAC clone RP24-353P11 from 13, complete sequence
          Length = 158972

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    actgctgttgtgcttgtttg 20
            ||||||||||||||||||||
Sbjct: 9919 actgctgttgtgcttgtttg 9900

>dbj|AB007459.1| Chara corallina ccm1 mRNA for myosin, complete cds
          Length = 8385

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 476  tggcatttggcttccaaatg 495
            ||||||||||||||||||||
Sbjct: 5000 tggcatttggcttccaaatg 4981

>dbj|AB034154.1| Chara corallina ccm mRNA for unconventional myosin heavy chain,
            complete cds
          Length = 8486

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 476  tggcatttggcttccaaatg 495
            ||||||||||||||||||||
Sbjct: 5345 tggcatttggcttccaaatg 5326


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,893,436
Number of Sequences: 3902068
Number of extensions: 6893436
Number of successful extensions: 144349
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 144181
Number of HSP's gapped (non-prelim): 168
length of query: 504
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 482
effective length of database: 17,147,199,772
effective search space: 8264950290104
effective search space used: 8264950290104
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)