ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags9i23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_469473.1| Oryza sativa (japonica cultivar-group), mRNA 226 7e-56
2dbj|AK066944.1| Oryza sativa (japonica cultivar-group) cDNA clon... 226 7e-56
3dbj|AK101929.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 3e-24
4dbj|AK073763.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 3e-24
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 109 1e-20
6gb|AC087797.5| Oryza sativa chromosome 3 BAC OSJNBb0022E02 genom... 109 1e-20
7dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
9dbj|AP004314.3| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
10gb|AF158101.6| Enterobacteria phage T4, complete genome 44 0.54
11emb|AL353614.9| Human DNA sequence from clone RP11-91N2 on chrom... 44 0.54
12ref|XM_688912.1| PREDICTED: Danio rerio similar to restin (LOC56... 44 0.54
13gb|J05172.1|PT4DDAA Bacteriophage T4 deoxycytidylate deaminase (... 44 0.54
14gb|AC113328.5| Mus musculus chromosome 3, clone RP23-456E2, comp... 42 2.1
15gb|AC121898.3| Mus musculus BAC clone RP24-161A24 from chromosom... 42 2.1
16emb|AL354769.17| Human DNA sequence from clone RP11-417G14 on ch... 42 2.1
17gb|AC164153.2| Mus musculus chromosome 3, clone RP23-370M4, comp... 42 2.1
18emb|CR936325.2| Medicago truncatula chromosome 5 clone mth2-53m2... 42 2.1
19gb|AC154273.2| Mus musculus BAC clone RP24-293F24 from chromosom... 42 2.1
20dbj|D00502.1|DENTAH Dengue virus type 1 gene for polyprotein pre... 42 2.1
21emb|CT573097.3| RP43-080H03, complete sequence 42 2.1
22gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 42 2.1
23gb|AC147224.5| Mus musculus BAC clone RP23-101E7 from 15, comple... 42 2.1
24gb|AC125076.4| Mus musculus BAC clone RP23-472F9 from chromosome... 40 8.4
25emb|AL355501.26| Human DNA sequence from clone RP11-360P7 on chr... 40 8.4
26emb|AL137249.29| Human DNA sequence from clone RP11-111L24 on ch... 40 8.4
27emb|AL122006.11|HSJ730H16 Human DNA sequence from clone RP4-730H... 40 8.4
28gb|AC020923.9| Homo sapiens chromosome 5 clone CTD-2123J17, comp... 40 8.4
29gb|AC016550.6| Homo sapiens chromosome 5 clone CTC-261N6, comple... 40 8.4
30gb|AC007282.4| Homo sapiens BAC clone RP11-484N9 from 2, complet... 40 8.4
31gb|AY132366.1| Spironucleus barkhanus glucosamine-6-phosphate is... 40 8.4
32emb|CT571264.2| Medicago truncatula chromosome 5 clone mth2-146m... 40 8.4
33dbj|AP003110.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 8.4
34emb|AL845453.6| Mouse DNA sequence from clone RP23-296G5 on chro... 40 8.4 
>ref|XM_469473.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1636

 Score =  226 bits (114), Expect = 7e-56
 Identities = 213/246 (86%)
 Strand = Plus / Plus

                                                                        
Query: 41   agcatgtggtttccctacaaatggtaccacactttgtaatttccagtgggttcgctgtca 100
            |||||||||||||||||| ||||||||||| ||||||||||||||||||||| | | || 
Sbjct: 919  agcatgtggtttccctaccaatggtaccaccctttgtaatttccagtgggttagatatct 978

                                                                        
Query: 101  tgaagatggcaccaggtattctattgaaggtgctacgatgtatgactatgtggttaccgc 160
            |||  ||||||||||| | ||||||||||||||||||||||||||||| || ||||| ||
Sbjct: 979  tgataatggcaccaggcagtctattgaaggtgctacgatgtatgactacgttgttactgc 1038

                                                                        
Query: 161  agatgatgttggcactcttcttgctgtagactgcactcctatggatgatagtggccgcca 220
             |||||||||| ||||||||| |||||||||||||| ||||||||||||| |  ||| ||
Sbjct: 1039 tgatgatgttgacactcttctggctgtagactgcacgcctatggatgataatacccgtca 1098

                                                                        
Query: 221  gggtgatttggtgagggagtttgctaacaatgagaacaagataacttgtgatcaagaaat 280
            |||||| ||||| |  |||| ||||||||| | || |||||||||||| ||||  || ||
Sbjct: 1099 gggtgaattggttacagagtatgctaacaacgggagcaagataacttgcgatccggagat 1158

                  
Query: 281  gcagaa 286
            ||||||
Sbjct: 1159 gcagaa 1164



 Score =  176 bits (89), Expect = 6e-41
 Identities = 175/201 (87%), Gaps = 2/201 (0%)
 Strand = Plus / Plus

                                                                        
Query: 420  aaggatgaagttgtaattgatgagaaatattcatcaaatctacagacgaaaattcccaat 479
            |||||||||||| |||  || |||||||||||||||||||||||||| |||||||| |||
Sbjct: 1289 aaggatgaagttctaaccgaagagaaatattcatcaaatctacagacaaaaattccgaat 1348

                                                                        
Query: 480  ggacggactactcagtttgttttagtaagttctggggggcgtaaatctaccatttaatac 539
            ||||| |||||||| ||||||||||| |||||| || || |||||| |||||||||| ||
Sbjct: 1349 ggacgcactactcaatttgttttagttagttct-ggaggtgtaaatataccatttaacac 1407

                                                                        
Query: 540  acagggaataaccgagccaaatagtgaggacaatgatgttagggctacgtgatctaatcg 599
            |||||||||| | || |||||||  ||||| |  ||||||| || |||||||||||||||
Sbjct: 1408 acagggaatatcagaaccaaataacgaggatagcgatgtta-ggttacgtgatctaatcg 1466

                                 
Query: 600  tattggtcatgcgaactttcc 620
            |||||||| || |||||||||
Sbjct: 1467 tattggtcttgagaactttcc 1487
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>dbj|AK066944.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089H23, full
            insert sequence
          Length = 2264

 Score =  226 bits (114), Expect = 7e-56
 Identities = 213/246 (86%)
 Strand = Plus / Plus

                                                                        
Query: 41   agcatgtggtttccctacaaatggtaccacactttgtaatttccagtgggttcgctgtca 100
            |||||||||||||||||| ||||||||||| ||||||||||||||||||||| | | || 
Sbjct: 1340 agcatgtggtttccctaccaatggtaccaccctttgtaatttccagtgggttagatatct 1399

                                                                        
Query: 101  tgaagatggcaccaggtattctattgaaggtgctacgatgtatgactatgtggttaccgc 160
            |||  ||||||||||| | ||||||||||||||||||||||||||||| || ||||| ||
Sbjct: 1400 tgataatggcaccaggcagtctattgaaggtgctacgatgtatgactacgttgttactgc 1459

                                                                        
Query: 161  agatgatgttggcactcttcttgctgtagactgcactcctatggatgatagtggccgcca 220
             |||||||||| ||||||||| |||||||||||||| ||||||||||||| |  ||| ||
Sbjct: 1460 tgatgatgttgacactcttctggctgtagactgcacgcctatggatgataatacccgtca 1519

                                                                        
Query: 221  gggtgatttggtgagggagtttgctaacaatgagaacaagataacttgtgatcaagaaat 280
            |||||| ||||| |  |||| ||||||||| | || |||||||||||| ||||  || ||
Sbjct: 1520 gggtgaattggttacagagtatgctaacaacgggagcaagataacttgcgatccggagat 1579

                  
Query: 281  gcagaa 286
            ||||||
Sbjct: 1580 gcagaa 1585



 Score =  176 bits (89), Expect = 6e-41
 Identities = 175/201 (87%), Gaps = 2/201 (0%)
 Strand = Plus / Plus

                                                                        
Query: 420  aaggatgaagttgtaattgatgagaaatattcatcaaatctacagacgaaaattcccaat 479
            |||||||||||| |||  || |||||||||||||||||||||||||| |||||||| |||
Sbjct: 1710 aaggatgaagttctaaccgaagagaaatattcatcaaatctacagacaaaaattccgaat 1769

                                                                        
Query: 480  ggacggactactcagtttgttttagtaagttctggggggcgtaaatctaccatttaatac 539
            ||||| |||||||| ||||||||||| |||||| || || |||||| |||||||||| ||
Sbjct: 1770 ggacgcactactcaatttgttttagttagttct-ggaggtgtaaatataccatttaacac 1828

                                                                        
Query: 540  acagggaataaccgagccaaatagtgaggacaatgatgttagggctacgtgatctaatcg 599
            |||||||||| | || |||||||  ||||| |  ||||||| || |||||||||||||||
Sbjct: 1829 acagggaatatcagaaccaaataacgaggatagcgatgtta-ggttacgtgatctaatcg 1887

                                 
Query: 600  tattggtcatgcgaactttcc 620
            |||||||| || |||||||||
Sbjct: 1888 tattggtcttgagaactttcc 1908
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>dbj|AK101929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033072F08, full
            insert sequence
          Length = 2717

 Score =  121 bits (61), Expect = 3e-24
 Identities = 121/141 (85%)
 Strand = Plus / Plus

                                                                        
Query: 128  aggtgctacgatgtatgactatgtggttaccgcagatgatgttggcactcttcttgctgt 187
            ||||||||||||||||||||| |||||||| || |||||||||| ||||||| | |||||
Sbjct: 1262 aggtgctacgatgtatgactacgtggttactgctgatgatgttgacactcttttggctgt 1321

                                                                        
Query: 188  agactgcactcctatggatgatagtggccgccagggtgatttggtgagggagtttgctaa 247
            ||||||||| ||||||||||||| |  | | |||||||| ||||| |  |||| | ||||
Sbjct: 1322 agactgcacgcctatggatgataatacctgtcagggtgaattggttacagagtatactaa 1381

                                 
Query: 248  caatgagaacaagataacttg 268
            ||||| || ||||||||||||
Sbjct: 1382 caatgggagcaagataacttg 1402



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                          
Query: 41   agcatgtggtttccctacaaatggtaccacactttgtaatttccag 86
            ||||||||||| |||||| |||||||| || |||||||||||||||
Sbjct: 1218 agcatgtggttaccctaccaatggtactaccctttgtaatttccag 1263
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>dbj|AK073763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068G07, full
            insert sequence
          Length = 3775

 Score =  121 bits (61), Expect = 3e-24
 Identities = 121/141 (85%)
 Strand = Plus / Plus

                                                                        
Query: 128  aggtgctacgatgtatgactatgtggttaccgcagatgatgttggcactcttcttgctgt 187
            ||||||||||||||||||||| |||||||| || |||||||||| ||||||| | |||||
Sbjct: 1207 aggtgctacgatgtatgactacgtggttactgctgatgatgttgacactcttttggctgt 1266

                                                                        
Query: 188  agactgcactcctatggatgatagtggccgccagggtgatttggtgagggagtttgctaa 247
            ||||||||| ||||||||||||| |  | | |||||||| ||||| |  |||| | ||||
Sbjct: 1267 agactgcacgcctatggatgataatacctgtcagggtgaattggttacagagtatactaa 1326

                                 
Query: 248  caatgagaacaagataacttg 268
            ||||| || ||||||||||||
Sbjct: 1327 caatgggagcaagataacttg 1347



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                          
Query: 41   agcatgtggtttccctacaaatggtaccacactttgtaatttccag 86
            ||||||||||| |||||| |||||||| || |||||||||||||||
Sbjct: 1163 agcatgtggttaccctaccaatggtactaccctttgtaatttccag 1208
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  109 bits (55), Expect = 1e-20
 Identities = 76/83 (91%)
 Strand = Plus / Minus

                                                                            
Query: 128      aggtgctacgatgtatgactatgtggttaccgcagatgatgttggcactcttcttgctgt 187
                ||||||||||||||||||||| || ||||| || |||||||||| ||||||||| |||||
Sbjct: 28183490 aggtgctacgatgtatgactacgttgttactgctgatgatgttgacactcttctggctgt 28183431

                                       
Query: 188      agactgcactcctatggatgata 210
                ||||||||| |||||||||||||
Sbjct: 28183430 agactgcacgcctatggatgata 28183408



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 88/101 (87%), Gaps = 1/101 (0%)
 Strand = Plus / Minus

                                                                            
Query: 462      cagacgaaaattcccaatggacggactactcagtttgttttagtaagttctggggggcgt 521
                ||||| |||||||| |||||||| |||||||| ||||||||||| |||||| || || ||
Sbjct: 28180087 cagacaaaaattccgaatggacgcactactcaatttgttttagttagttct-ggaggtgt 28180029

                                                         
Query: 522      aaatctaccatttaatacacagggaataaccgagccaaata 562
                |||| |||||||||| |||||||||||| | || |||||||
Sbjct: 28180028 aaatataccatttaacacacagggaatatcagaaccaaata 28179988



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 44/46 (95%)
 Strand = Plus / Minus

                                                              
Query: 41       agcatgtggtttccctacaaatggtaccacactttgtaatttccag 86
                |||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 28183772 agcatgtggtttccctaccaatggtaccaccctttgtaatttccag 28183727



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                             
Query: 420      aaggatgaagttgtaattgatgagaaatattcatcaaatctacag 464
                |||||||||||| |||  || ||||||||||||||||||||||||
Sbjct: 28180252 aaggatgaagttctaaccgaagagaaatattcatcaaatctacag 28180208



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                    
Query: 585      tacgtgatctaatcgtattggtcatgcgaactttcc 620
                ||||||||||||||||||||||| || |||||||||
Sbjct: 28179860 tacgtgatctaatcgtattggtcttgagaactttcc 28179825
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>gb|AC087797.5| Oryza sativa chromosome 3 BAC OSJNBb0022E02 genomic sequence, complete
             sequence
          Length = 122497

 Score =  109 bits (55), Expect = 1e-20
 Identities = 76/83 (91%)
 Strand = Plus / Minus

                                                                         
Query: 128   aggtgctacgatgtatgactatgtggttaccgcagatgatgttggcactcttcttgctgt 187
             ||||||||||||||||||||| || ||||| || |||||||||| ||||||||| |||||
Sbjct: 34631 aggtgctacgatgtatgactacgttgttactgctgatgatgttgacactcttctggctgt 34572

                                    
Query: 188   agactgcactcctatggatgata 210
             ||||||||| |||||||||||||
Sbjct: 34571 agactgcacgcctatggatgata 34549



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 88/101 (87%), Gaps = 1/101 (0%)
 Strand = Plus / Minus

                                                                         
Query: 462   cagacgaaaattcccaatggacggactactcagtttgttttagtaagttctggggggcgt 521
             ||||| |||||||| |||||||| |||||||| ||||||||||| |||||| || || ||
Sbjct: 31228 cagacaaaaattccgaatggacgcactactcaatttgttttagttagttct-ggaggtgt 31170

                                                      
Query: 522   aaatctaccatttaatacacagggaataaccgagccaaata 562
             |||| |||||||||| |||||||||||| | || |||||||
Sbjct: 31169 aaatataccatttaacacacagggaatatcagaaccaaata 31129



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 44/46 (95%)
 Strand = Plus / Minus

                                                           
Query: 41    agcatgtggtttccctacaaatggtaccacactttgtaatttccag 86
             |||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 34913 agcatgtggtttccctaccaatggtaccaccctttgtaatttccag 34868



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                          
Query: 420   aaggatgaagttgtaattgatgagaaatattcatcaaatctacag 464
             |||||||||||| |||  || ||||||||||||||||||||||||
Sbjct: 31393 aaggatgaagttctaaccgaagagaaatattcatcaaatctacag 31349



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                 
Query: 585   tacgtgatctaatcgtattggtcatgcgaactttcc 620
             ||||||||||||||||||||||| || |||||||||
Sbjct: 31001 tacgtgatctaatcgtattggtcttgagaactttcc 30966
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  109 bits (55), Expect = 1e-20
 Identities = 76/83 (91%)
 Strand = Plus / Plus

                                                                           
Query: 128     aggtgctacgatgtatgactatgtggttaccgcagatgatgttggcactcttcttgctgt 187
               ||||||||||||||||||||| |||||||| || |||||||||| ||||||| | |||||
Sbjct: 1982676 aggtgctacgatgtatgactacgtggttactgctgatgatgttgacactcttttggctgt 1982735

                                      
Query: 188     agactgcactcctatggatgata 210
               ||||||||| |||||||||||||
Sbjct: 1982736 agactgcacgcctatggatgata 1982758



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                             
Query: 41      agcatgtggtttccctacaaatggtaccacactttgtaatttccag 86
               ||||||||||| |||||| |||||||| || |||||||||||||||
Sbjct: 1982395 agcatgtggttaccctaccaatggtactaccctttgtaatttccag 1982440
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  109 bits (55), Expect = 1e-20
 Identities = 76/83 (91%)
 Strand = Plus / Minus

                                                                            
Query: 128      aggtgctacgatgtatgactatgtggttaccgcagatgatgttggcactcttcttgctgt 187
                ||||||||||||||||||||| || ||||| || |||||||||| ||||||||| |||||
Sbjct: 28274814 aggtgctacgatgtatgactacgttgttactgctgatgatgttgacactcttctggctgt 28274755

                                       
Query: 188      agactgcactcctatggatgata 210
                ||||||||| |||||||||||||
Sbjct: 28274754 agactgcacgcctatggatgata 28274732



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 88/101 (87%), Gaps = 1/101 (0%)
 Strand = Plus / Minus

                                                                            
Query: 462      cagacgaaaattcccaatggacggactactcagtttgttttagtaagttctggggggcgt 521
                ||||| |||||||| |||||||| |||||||| ||||||||||| |||||| || || ||
Sbjct: 28271411 cagacaaaaattccgaatggacgcactactcaatttgttttagttagttct-ggaggtgt 28271353

                                                         
Query: 522      aaatctaccatttaatacacagggaataaccgagccaaata 562
                |||| |||||||||| |||||||||||| | || |||||||
Sbjct: 28271352 aaatataccatttaacacacagggaatatcagaaccaaata 28271312



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 44/46 (95%)
 Strand = Plus / Minus

                                                              
Query: 41       agcatgtggtttccctacaaatggtaccacactttgtaatttccag 86
                |||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 28275096 agcatgtggtttccctaccaatggtaccaccctttgtaatttccag 28275051



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                             
Query: 420      aaggatgaagttgtaattgatgagaaatattcatcaaatctacag 464
                |||||||||||| |||  || ||||||||||||||||||||||||
Sbjct: 28271576 aaggatgaagttctaaccgaagagaaatattcatcaaatctacag 28271532



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                    
Query: 585      tacgtgatctaatcgtattggtcatgcgaactttcc 620
                ||||||||||||||||||||||| || |||||||||
Sbjct: 28271184 tacgtgatctaatcgtattggtcttgagaactttcc 28271149
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>dbj|AP004314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0495H05
          Length = 205595

 Score =  109 bits (55), Expect = 1e-20
 Identities = 76/83 (91%)
 Strand = Plus / Plus

                                                                         
Query: 128   aggtgctacgatgtatgactatgtggttaccgcagatgatgttggcactcttcttgctgt 187
             ||||||||||||||||||||| |||||||| || |||||||||| ||||||| | |||||
Sbjct: 66973 aggtgctacgatgtatgactacgtggttactgctgatgatgttgacactcttttggctgt 67032

                                    
Query: 188   agactgcactcctatggatgata 210
             ||||||||| |||||||||||||
Sbjct: 67033 agactgcacgcctatggatgata 67055



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                           
Query: 41    agcatgtggtttccctacaaatggtaccacactttgtaatttccag 86
             ||||||||||| |||||| |||||||| || |||||||||||||||
Sbjct: 66692 agcatgtggttaccctaccaatggtactaccctttgtaatttccag 66737
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>gb|AF158101.6| Enterobacteria phage T4, complete genome
          Length = 168903

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 119    ttctattgaaggtgctacgatgtatg 144
              |||||||||||||||||| |||||||
Sbjct: 132346 ttctattgaaggtgctactatgtatg 132321
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>emb|AL353614.9| Human DNA sequence from clone RP11-91N2 on chromosome 9p24.1-24.3
             Contains part of a novel gene (FLJ35024) and a novel gene,
             complete sequence
          Length = 119255

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 95    ctgtcatgaagatggcaccagg 116
             ||||||||||||||||||||||
Sbjct: 97917 ctgtcatgaagatggcaccagg 97938
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>ref|XM_688912.1| PREDICTED: Danio rerio similar to restin (LOC565646), mRNA
          Length = 1641

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 323  ctttgatgtttttgtcctgcaggggt 348
            ||||||| ||||||||||||||||||
Sbjct: 1402 ctttgatctttttgtcctgcaggggt 1377
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>gb|J05172.1|PT4DDAA Bacteriophage T4 deoxycytidylate deaminase (cd) gene, complete cds
          Length = 2134

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 119 ttctattgaaggtgctacgatgtatg 144
           |||||||||||||||||| |||||||
Sbjct: 892 ttctattgaaggtgctactatgtatg 917
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>gb|AC113328.5| Mus musculus chromosome 3, clone RP23-456E2, complete sequence
          Length = 168421

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 164   tgatgttggcactcttcttgctgta 188
             ||||||||||| |||||||||||||
Sbjct: 30834 tgatgttggcaatcttcttgctgta 30858
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>gb|AC121898.3| Mus musculus BAC clone RP24-161A24 from chromosome 15, complete sequence
          Length = 193321

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 294    aatatatgtatttcaaggggg 314
              |||||||||||||||||||||
Sbjct: 116771 aatatatgtatttcaaggggg 116791
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>emb|AL354769.17| Human DNA sequence from clone RP11-417G14 on chromosome X, complete
             sequence
          Length = 113526

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 292   tcaatatatgtatttcaaggg 312
             |||||||||||||||||||||
Sbjct: 29747 tcaatatatgtatttcaaggg 29727
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>gb|AC164153.2| Mus musculus chromosome 3, clone RP23-370M4, complete sequence
          Length = 187100

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 164   tgatgttggcactcttcttgctgta 188
             ||||||||||| |||||||||||||
Sbjct: 52289 tgatgttggcaatcttcttgctgta 52313
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>emb|CR936325.2| Medicago truncatula chromosome 5 clone mth2-53m2, COMPLETE SEQUENCE
          Length = 139736

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 286   atgatatcaatatatgtattt 306
             |||||||||||||||||||||
Sbjct: 34907 atgatatcaatatatgtattt 34927
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>gb|AC154273.2| Mus musculus BAC clone RP24-293F24 from chromosome 16, complete sequence
          Length = 133889

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 291    atcaatatatgtatttcaagg 311
              |||||||||||||||||||||
Sbjct: 127519 atcaatatatgtatttcaagg 127499
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>dbj|D00502.1|DENTAH Dengue virus type 1 gene for polyprotein precursor, partial cds,
           strain:Thailand AHF82-80
          Length = 2474

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 309 agggggagagccgactttgat 329
           |||||||||||||||||||||
Sbjct: 461 agggggagagccgactttgat 481
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>emb|CT573097.3| RP43-080H03, complete sequence
          Length = 174747

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 292   tcaatatatgtatttcaaggg 312
             |||||||||||||||||||||
Sbjct: 88307 tcaatatatgtatttcaaggg 88327
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>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 271     atcaagaaatgcagaatgata 291
               |||||||||||||||||||||
Sbjct: 2405663 atcaagaaatgcagaatgata 2405683
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>gb|AC147224.5| Mus musculus BAC clone RP23-101E7 from 15, complete sequence
          Length = 201924

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 294  aatatatgtatttcaaggggg 314
            |||||||||||||||||||||
Sbjct: 1604 aatatatgtatttcaaggggg 1584
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>gb|AC125076.4| Mus musculus BAC clone RP23-472F9 from chromosome 2, complete sequence
          Length = 165496

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 439   atgagaaatattcatcaaat 458
             ||||||||||||||||||||
Sbjct: 19885 atgagaaatattcatcaaat 19904
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>emb|AL355501.26| Human DNA sequence from clone RP11-360P7 on chromosome 10 Contains the
             5' end of the gene for a novel protein (FLJ32798), a zinc
             finger protein pseudogene and a CpG island, complete
             sequence
          Length = 179380

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 353   tcctgaagaatgggaacatg 372
             ||||||||||||||||||||
Sbjct: 22077 tcctgaagaatgggaacatg 22058
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>emb|AL137249.29| Human DNA sequence from clone RP11-111L24 on chromosome 13q31.3-32.3
             Contains the 3' end of the FARP1 gene for
             (chondrocyte-derived) FERM, RhoGEF (ARHGEF) and pleckstrin
             domain protein 1, a novel gene and the 3' end of the STK24
             gene for serine/threonine kinase 24, complete sequence
          Length = 106578

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 559   aatagtgaggacaatgatgt 578
             ||||||||||||||||||||
Sbjct: 25956 aatagtgaggacaatgatgt 25975
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>emb|AL122006.11|HSJ730H16 Human DNA sequence from clone RP4-730H16 on chromosome 1p13.1-13.3,
              complete sequence
          Length = 151391

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 276    gaaatgcagaatgatatcaatata 299
              |||||| |||||||||||||||||
Sbjct: 107586 gaaatgaagaatgatatcaatata 107609
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>gb|AC020923.9| Homo sapiens chromosome 5 clone CTD-2123J17, complete sequence
          Length = 159973

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 403   aaataaacttcagtcataag 422
             ||||||||||||||||||||
Sbjct: 29652 aaataaacttcagtcataag 29633
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>gb|AC016550.6| Homo sapiens chromosome 5 clone CTC-261N6, complete sequence
          Length = 88581

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 403   aaataaacttcagtcataag 422
             ||||||||||||||||||||
Sbjct: 28837 aaataaacttcagtcataag 28856
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>gb|AC007282.4| Homo sapiens BAC clone RP11-484N9 from 2, complete sequence
          Length = 182632

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 422   ggatgaagttgtaattgatg 441
             ||||||||||||||||||||
Sbjct: 21968 ggatgaagttgtaattgatg 21987
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>gb|AY132366.1| Spironucleus barkhanus glucosamine-6-phosphate isomerase (nagB2)
            gene, complete cds
          Length = 3303

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 109  gcaccaggtattctattgaa 128
            ||||||||||||||||||||
Sbjct: 1272 gcaccaggtattctattgaa 1291
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>emb|CT571264.2| Medicago truncatula chromosome 5 clone mth2-146m15, COMPLETE SEQUENCE
          Length = 141614

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 427   aagttgtaattgatgagaaa 446
             ||||||||||||||||||||
Sbjct: 54833 aagttgtaattgatgagaaa 54852
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>dbj|AP003110.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-843A23, complete
             sequence
          Length = 142000

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 290   tatcaatatatgtatttcaa 309
             ||||||||||||||||||||
Sbjct: 56562 tatcaatatatgtatttcaa 56543
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>emb|AL845453.6| Mouse DNA sequence from clone RP23-296G5 on chromosome 2, complete
             sequence
          Length = 159565

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 439   atgagaaatattcatcaaat 458
             ||||||||||||||||||||
Sbjct: 71450 atgagaaatattcatcaaat 71431


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,401,934
Number of Sequences: 3902068
Number of extensions: 5401934
Number of successful extensions: 95409
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 95198
Number of HSP's gapped (non-prelim): 202
length of query: 620
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 597
effective length of database: 17,143,297,704
effective search space: 10234548729288
effective search space used: 10234548729288
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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