>gb|AY710429.1| Cryptococcus gattii strain E566 MATa locus, complete sequence
          Length = 144400

 Score = 42.1 bits (21), Expect = 0.12
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 32    accattttctgtaaacggttc 52
             |||||||||||||||||||||
Sbjct: 32570 accattttctgtaaacggttc 32590

>gb|AC068064.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-199I14, complete
              sequence
          Length = 152776

 Score = 42.1 bits (21), Expect = 0.12
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 11     ctgtttacagacatactgaac 31
              |||||||||||||||||||||
Sbjct: 119864 ctgtttacagacatactgaac 119884

>gb|AC154236.2| Mus musculus BAC clone RP24-160E14 from chromosome 17, complete
             sequence
          Length = 162390

 Score = 38.2 bits (19), Expect = 1.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 19    agacatactgaacaccatt 37
             |||||||||||||||||||
Sbjct: 58668 agacatactgaacaccatt 58650

>gb|AC148920.1| Mus musculus BAC clone RP23-273O10 from chromosome 19, complete
            sequence
          Length = 224526

 Score = 38.2 bits (19), Expect = 1.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 21   acatactgaacaccattttctgt 43
            |||||||||||||||||| ||||
Sbjct: 5562 acatactgaacaccatttcctgt 5584

>emb|CT025223.2| Xenopus tropicalis finished cDNA, clone TEgg088d21
          Length = 760

 Score = 38.2 bits (19), Expect = 1.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 23  atactgaacaccattttct 41
           |||||||||||||||||||
Sbjct: 598 atactgaacaccattttct 580

>gb|AC004131.1|HUAC004131 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-69G12, complete
            sequence
          Length = 77713

 Score = 38.2 bits (19), Expect = 1.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 21   acatactgaacaccatttt 39
            |||||||||||||||||||
Sbjct: 2812 acatactgaacaccatttt 2830

>gb|AC183297.3| Pan troglodytes BAC clone CH251-300E12 from chromosome 18, complete
              sequence
          Length = 173095

 Score = 38.2 bits (19), Expect = 1.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 10     tctgtttacagacatactg 28
              |||||||||||||||||||
Sbjct: 153051 tctgtttacagacatactg 153033

>gb|AC153014.4| Mus musculus BAC clone RP23-203I6 from chromosome 19, complete sequence
          Length = 195382

 Score = 38.2 bits (19), Expect = 1.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 21    acatactgaacaccattttctgt 43
             |||||||||||||||||| ||||
Sbjct: 47553 acatactgaacaccatttcctgt 47575

>gb|AC027130.5|AC027130 Homo sapiens chromosome 16 clone CTD-2380F24, complete sequence
          Length = 134640

 Score = 38.2 bits (19), Expect = 1.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 21    acatactgaacaccatttt 39
             |||||||||||||||||||
Sbjct: 91532 acatactgaacaccatttt 91550

>gb|AC134300.3| Homo sapiens chromosome 16 clone CTC-496I23, complete sequence
          Length = 171048

 Score = 38.2 bits (19), Expect = 1.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 21     acatactgaacaccatttt 39
              |||||||||||||||||||
Sbjct: 110067 acatactgaacaccatttt 110049

>emb|AL954678.8| Zebrafish DNA sequence from clone CH211-207E14 in linkage group 9,
              complete sequence
          Length = 219500

 Score = 38.2 bits (19), Expect = 1.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 25     actgaacaccattttctgt 43
              |||||||||||||||||||
Sbjct: 119237 actgaacaccattttctgt 119255

>gb|AC107648.11| Mus musculus chromosome 19, clone RP23-126M4, complete sequence
          Length = 210931

 Score = 38.2 bits (19), Expect = 1.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 21    acatactgaacaccattttctgt 43
             |||||||||||||||||| ||||
Sbjct: 47546 acatactgaacaccatttcctgt 47568

>gb|BC084841.1| Xenopus laevis hypothetical LOC495375, mRNA (cDNA clone MGC:85415
           IMAGE:6933368), complete cds
          Length = 812

 Score = 38.2 bits (19), Expect = 1.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 23  atactgaacaccattttct 41
           |||||||||||||||||||
Sbjct: 702 atactgaacaccattttct 684

>gb|AE008443.1| Streptococcus pneumoniae R6 section 59 of 184 of the complete genome
          Length = 11402

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 29   aacaccattttctgtaaa 46
            ||||||||||||||||||
Sbjct: 2174 aacaccattttctgtaaa 2191

>gb|AC149236.1| Pan troglodytes chromosome X clone PTB-119K17 map human ortholog q28,
              complete sequence
          Length = 191554

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 14     tttacagacatactgaac 31
              ||||||||||||||||||
Sbjct: 128025 tttacagacatactgaac 128008

>emb|CR628341.13| Zebrafish DNA sequence from clone DKEY-29G22 in linkage group 6,
             complete sequence
          Length = 246165

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 30    acaccattttctgtaaac 47
             ||||||||||||||||||
Sbjct: 75561 acaccattttctgtaaac 75544

>gb|AY363103.1|AY363102S2 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, exons 6
             through 10 and partial cds
          Length = 688489

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 25    actgaacaccattttctg 42
             ||||||||||||||||||
Sbjct: 69048 actgaacaccattttctg 69031

>gb|AC123846.5| Mus musculus BAC clone RP23-435B22 from chromosome 2, complete sequence
          Length = 221128

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 6      aatgtctgtttacagaca 23
              ||||||||||||||||||
Sbjct: 199987 aatgtctgtttacagaca 199970

>gb|AC121939.3| Mus musculus BAC clone RP24-208M2 from chromosome 2, complete
            sequence
          Length = 153093

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 6    aatgtctgtttacagaca 23
            ||||||||||||||||||
Sbjct: 6188 aatgtctgtttacagaca 6171

>gb|AC110919.10| Mus musculus chromosome 15, clone RP23-216B8, complete sequence
          Length = 228930

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 13     gtttacagacatactgaa 30
              ||||||||||||||||||
Sbjct: 192194 gtttacagacatactgaa 192177

>emb|AL157886.13| Human DNA sequence from clone RP11-59M22 on chromosome 9q21.31-21.33,
             complete sequence
          Length = 156956

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 26    ctgaacaccattttctgt 43
             ||||||||||||||||||
Sbjct: 91428 ctgaacaccattttctgt 91445

>emb|Z70043.1|SPAC22E12 S.pombe chromosome I cosmid c22E12
          Length = 37172

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 13    gtttacagacatactgaa 30
             ||||||||||||||||||
Sbjct: 13094 gtttacagacatactgaa 13077

>emb|BX005334.9| Zebrafish DNA sequence from clone DKEY-61F9 in linkage group 4 Contains
             a novel gene and two genes for novel proteins containing
             Lectin C-type domain, complete sequence
          Length = 133325

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 7     atgtctgtttacagacat 24
             ||||||||||||||||||
Sbjct: 98523 atgtctgtttacagacat 98540

>gb|AC092997.6| Homo sapiens 3 BAC RP11-711L14 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 151059

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 21     acatactgaacaccattt 38
              ||||||||||||||||||
Sbjct: 117716 acatactgaacaccattt 117733

>gb|AC132139.4| Mus musculus BAC clone RP23-181A24 from chromosome 10, complete
             sequence
          Length = 206712

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 8     tgtctgtttacagacatactga 29
             ||||||||||||| ||||||||
Sbjct: 90388 tgtctgtttacagccatactga 90409

>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 26      ctgaacaccattttctgt 43
               ||||||||||||||||||
Sbjct: 2473140 ctgaacaccattttctgt 2473123

>dbj|AK033204.1| Mus musculus 15 days embryo male testis cDNA, RIKEN full-length
            enriched library, clone:8030460C15
            product:unclassifiable, full insert sequence
          Length = 3008

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 13   gtttacagacatactgaa 30
            ||||||||||||||||||
Sbjct: 1448 gtttacagacatactgaa 1431

>emb|AL845547.18| Mouse DNA sequence from clone RP23-296A4 on chromosome 2, complete
             sequence
          Length = 187738

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 6     aatgtctgtttacagaca 23
             ||||||||||||||||||
Sbjct: 67886 aatgtctgtttacagaca 67869

>gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome
          Length = 2160842

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 29     aacaccattttctgtaaa 46
              ||||||||||||||||||
Sbjct: 703640 aacaccattttctgtaaa 703657

>emb|X69882.1|SPRNA1G S.pombe rna1 gene
          Length = 1766

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 13   gtttacagacatactgaa 30
            ||||||||||||||||||
Sbjct: 1651 gtttacagacatactgaa 1634

>dbj|AP002372.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-203C2, complete
              sequence
          Length = 145255

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 29     aacaccattttctgtaaa 46
              ||||||||||||||||||
Sbjct: 138564 aacaccattttctgtaaa 138581

>dbj|AP003383.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-21G19, complete
             sequences
          Length = 157533

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 29    aacaccattttctgtaaa 46
             ||||||||||||||||||
Sbjct: 70591 aacaccattttctgtaaa 70608

>gb|AC002368.1|AC002368 Homo sapiens Xq28 BAC PAC and cosmid clones containing FMR2 gene exons
              1,2, and 3, complete sequence
          Length = 324816

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 14     tttacagacatactgaac 31
              ||||||||||||||||||
Sbjct: 313463 tttacagacatactgaac 313446

>emb|AL935136.4| Zebrafish DNA sequence from clone CH211-180B2, complete sequence
          Length = 146712

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 30     acaccattttctgtaaac 47
              ||||||||||||||||||
Sbjct: 102121 acaccattttctgtaaac 102104

>emb|AL805921.7| Mouse DNA sequence from clone RP23-293N9 on chromosome 4, complete
             sequence
          Length = 162090

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 24/26 (92%)
 Strand = Plus / Plus

                                       
Query: 12    tgtttacagacatactgaacaccatt 37
             |||||||||||| |||||| ||||||
Sbjct: 66310 tgtttacagacacactgaaaaccatt 66335

>emb|AL589696.10| Mouse DNA sequence from clone RP23-454M13 on chromosome 15, complete
             sequence
          Length = 207431

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 25    actgaacaccattttctg 42
             ||||||||||||||||||
Sbjct: 91609 actgaacaccattttctg 91626

>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome
          Length = 3184243

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 22      catactgaacaccatttt 39
               ||||||||||||||||||
Sbjct: 1917860 catactgaacaccatttt 1917843


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 571,088
Number of Sequences: 3902068
Number of extensions: 571088
Number of successful extensions: 124326
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 124167
Number of HSP's gapped (non-prelim): 159
length of query: 54
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 34
effective length of database: 17,155,003,908
effective search space: 583270132872
effective search space used: 583270132872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)