>emb|X95257.1|HVXYLISOP H.vulgare mRNA for xylose isomerase
          Length = 1710

 Score =  163 bits (82), Expect = 1e-37
 Identities = 86/88 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtgagaccaatataaagccattatggggaactgcncaacttttcatgcatccacgttnca 60
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 599 gtgagaccaatataaagccattatggggaactgcacaacttttcatgcatccacgttaca 658

                                       
Query: 61  tgcacggagctgctactagcccagaggt 88
           ||||||||||||||||||||||||||||
Sbjct: 659 tgcacggagctgctactagcccagaggt 686

>emb|X95256.1|HVXYLISOG H.vulgare xylose isomerase gene
          Length = 4473

 Score =  145 bits (73), Expect = 2e-32
 Identities = 77/79 (97%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtgagaccaatataaagccattatggggaactgcncaacttttcatgcatccacgttnca 60
            |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 2034 gtgagaccaatataaagccattatggggaactgcacaacttttcatgcatccacgttaca 2093

                               
Query: 61   tgcacggagctgctactag 79
            |||||||||||||||||||
Sbjct: 2094 tgcacggagctgctactag 2112

>gb|BT018392.1| Zea mays clone EL01N0319D07.d mRNA sequence
          Length = 1548

 Score = 91.7 bits (46), Expect = 3e-16
 Identities = 77/88 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtgagaccaatataaagccattatggggaactgcncaacttttcatgcatccacgttnca 60
           |||||||||||||||||||||| ||||| || || || || || ||||||||||||| ||
Sbjct: 354 gtgagaccaatataaagccattgtggggtaccgcacagctctttatgcatccacgttaca 413

                                       
Query: 61  tgcacggagctgctactagcccagaggt 88
           |||| || |||||||| |||||||||||
Sbjct: 414 tgcatggcgctgctacgagcccagaggt 441

>gb|AY104014.1| Zea mays PCO103489 mRNA sequence
          Length = 2135

 Score = 91.7 bits (46), Expect = 3e-16
 Identities = 77/88 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtgagaccaatataaagccattatggggaactgcncaacttttcatgcatccacgttnca 60
            |||||||||||||||||||||| ||||| || || || || || ||||||||||||| ||
Sbjct: 932  gtgagaccaatataaagccattgtggggtaccgcacagctctttatgcatccacgttaca 991

                                        
Query: 61   tgcacggagctgctactagcccagaggt 88
            |||| || |||||||| |||||||||||
Sbjct: 992  tgcatggcgctgctacgagcccagaggt 1019

>ref|XM_479446.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1760

 Score = 87.7 bits (44), Expect = 5e-15
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                       
Query: 3   gagaccaatataaagccattatggggaactgcncaacttttcatgcatccacgttncatg 62
           |||||||||||||| ||| | ||||| ||||| || ||||||||||| || || | ||||
Sbjct: 629 gagaccaatataaaaccactgtgggggactgcacagcttttcatgcacccgcgctacatg 688

                                     
Query: 63  cacggagctgctactagcccagaggt 88
           ||||| ||||||||||||||||||||
Sbjct: 689 cacggtgctgctactagcccagaggt 714

>dbj|AK104085.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-F02, full
           insert sequence
          Length = 1177

 Score = 87.7 bits (44), Expect = 5e-15
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                       
Query: 3   gagaccaatataaagccattatggggaactgcncaacttttcatgcatccacgttncatg 62
           |||||||||||||| ||| | ||||| ||||| || ||||||||||| || || | ||||
Sbjct: 39  gagaccaatataaaaccactgtgggggactgcacagcttttcatgcacccgcgctacatg 98

                                     
Query: 63  cacggagctgctactagcccagaggt 88
           ||||| ||||||||||||||||||||
Sbjct: 99  cacggtgctgctactagcccagaggt 124

>dbj|AK072249.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001E09, full
           insert sequence
          Length = 1760

 Score = 87.7 bits (44), Expect = 5e-15
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                       
Query: 3   gagaccaatataaagccattatggggaactgcncaacttttcatgcatccacgttncatg 62
           |||||||||||||| ||| | ||||| ||||| || ||||||||||| || || | ||||
Sbjct: 629 gagaccaatataaaaccactgtgggggactgcacagcttttcatgcacccgcgctacatg 688

                                     
Query: 63  cacggagctgctactagcccagaggt 88
           ||||| ||||||||||||||||||||
Sbjct: 689 cacggtgctgctactagcccagaggt 714

>gb|AF140230.1|AF140230 Oryza sativa xylose isomerase mRNA, partial cds
          Length = 510

 Score = 87.7 bits (44), Expect = 5e-15
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                       
Query: 3   gagaccaatataaagccattatggggaactgcncaacttttcatgcatccacgttncatg 62
           |||||||||||||| ||| | ||||| ||||| || ||||||||||| || || | ||||
Sbjct: 177 gagaccaatataaaaccactgtgggggactgcacagcttttcatgcacccgcgctacatg 236

                                     
Query: 63  cacggagctgctactagcccagaggt 88
           ||||| ||||||||||||||||||||
Sbjct: 237 cacggtgctgctactagcccagaggt 262

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 69.9 bits (35), Expect = 1e-09
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                            
Query: 3        gagaccaatataaagccattatggggaactgcncaacttttcatgcatccacgttncatg 62
                |||||||||||||| ||| | ||||| ||||| || ||||||||||| || || | ||||
Sbjct: 28221177 gagaccaatataaaaccactgtgggggactgcacagcttttcatgcacccgcgctacatg 28221118

                                 
Query: 63       cacggagctgctactag 79
                ||||| |||||||||||
Sbjct: 28221117 cacggtgctgctactag 28221101

>dbj|AP004570.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0625E02
          Length = 153921

 Score = 69.9 bits (35), Expect = 1e-09
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                         
Query: 3     gagaccaatataaagccattatggggaactgcncaacttttcatgcatccacgttncatg 62
             |||||||||||||| ||| | ||||| ||||| || ||||||||||| || || | ||||
Sbjct: 76722 gagaccaatataaaaccactgtgggggactgcacagcttttcatgcacccgcgctacatg 76663

                              
Query: 63    cacggagctgctactag 79
             ||||| |||||||||||
Sbjct: 76662 cacggtgctgctactag 76646

>gb|AY084958.1| Arabidopsis thaliana clone 122798 mRNA, complete sequence
          Length = 1649

 Score = 52.0 bits (26), Expect = 2e-04
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                               
Query: 18  ccattatggggaactgcncaacttttcatgcatccacgttncatgcacggag 69
           ||||| |||||||| || || |||||| ||||||| |||| |||||||||||
Sbjct: 549 ccattgtggggaacagctcagcttttcttgcatcctcgttacatgcacggag 600

>gb|AY084800.1| Arabidopsis thaliana clone 118282 mRNA, complete sequence
          Length = 1838

 Score = 52.0 bits (26), Expect = 2e-04
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                               
Query: 18  ccattatggggaactgcncaacttttcatgcatccacgttncatgcacggag 69
           ||||| |||||||| || || |||||| ||||||| |||| |||||||||||
Sbjct: 686 ccattgtggggaacagctcagcttttcttgcatcctcgttacatgcacggag 737

>ref|NM_080764.2| Homo sapiens suppressor of hairy wing homolog 2 (Drosophila) (SUHW2),
            mRNA
          Length = 5733

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 9    aatataaagccattatggg 27
            |||||||||||||||||||
Sbjct: 3898 aatataaagccattatggg 3880

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 2        tgagaccaatataaagcca 20
                |||||||||||||||||||
Sbjct: 19389994 tgagaccaatataaagcca 19390012

>gb|AC119407.15| Pan troglodytes clone ch251-541e23, complete sequence
          Length = 204962

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 9     aatataaagccattatggg 27
             |||||||||||||||||||
Sbjct: 43244 aatataaagccattatggg 43226

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 2        tgagaccaatataaagcca 20
                |||||||||||||||||||
Sbjct: 19383021 tgagaccaatataaagcca 19383039

>ref|NG_000002.1| Homo sapiens immunoglobulin lambda locus (IGL@) on chromosome 22
          Length = 909203

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 9      aatataaagccattatggg 27
              |||||||||||||||||||
Sbjct: 464590 aatataaagccattatggg 464608

>emb|AL714023.12| Mouse DNA sequence from clone RP23-12H6 on chromosome 2, complete
              sequence
          Length = 211570

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 61     tgcacggagctgctactag 79
              |||||||||||||||||||
Sbjct: 148956 tgcacggagctgctactag 148974

>dbj|D87009.1| Homo sapiens immunoglobulin lambda gene locus DNA, clone:288A10
          Length = 104386

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 9     aatataaagccattatggg 27
             |||||||||||||||||||
Sbjct: 67369 aatataaagccattatggg 67387


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 416,705
Number of Sequences: 3902068
Number of extensions: 416705
Number of successful extensions: 25197
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 25157
Number of HSP's gapped (non-prelim): 40
length of query: 88
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 67
effective length of database: 17,151,101,840
effective search space: 1149123823280
effective search space used: 1149123823280
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)