Clone Name | bags9i16 |
---|---|
Clone Library Name | barley_pub |
>emb|AJ495769.1|HVU495769 Hordeum vulgare mRNA for putative immunophilin Length = 835 Score = 1130 bits (570), Expect = 0.0 Identities = 600/606 (99%), Gaps = 3/606 (0%) Strand = Plus / Plus Query: 1 gggcttcttctctgcctgctggtcgtcgccgccgcgctcctgctcgtcgcctccgccaag 60 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 101 gggcttcttctctgcctgctggtcgtggccgccgcgctcctgctcgtcgcctccgccaag 160 Query: 61 naagtccggcgacgtgtcggcgctccagatcggcgtcaagtacaagccagaatcgtgcag 120 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 161 -aagtccggcgacgtgtcggcactccagatcggcgtcaagtacaagccagaatcgtgcag 219 Query: 121 catctcggctcacaaaggagacagagttaaagttcactaccgtggaacacttaccgatgg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 220 catctcggctcacaaaggagacagagttaaagttcactaccgtggaacacttaccgatgg 279 Query: 181 naacagtttttgattctagctatgaaaggggtgacccaattgaatttgaattgggcactg 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 280 -aacagtttttgattctagctatgaaaggggtgacccaattgaatttgaattgggcactg 338 Query: 241 gtcaagtgatcaaaggatgggatcagggaattttgggcatgtgcattggtgagaagagga 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 gtcaagtgatcaaaggatgggatcagggaattttgggcatgtgcattggtgagaagagga 398 Query: 301 agctgaagatcccttcaaagctcggctacggggatcagggatcaccacctaccattccag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 agctgaagatcccttcaaagctcggctacggggatcagggatcaccacctaccattccag 458 Query: 361 gcggagcaactctcatattcgacacagagcttgtcgcagtcaatggcgagccttctagca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 gcggagcaactctcatattcgacacagagcttgtcgcagtcaatggcgagccttctagca 518 Query: 421 aatcagacgaggatgtcgctgatagtgatctgtaggcagctcggcgcagcaagttcgccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 aatcagacgaggatgtcgctgatagtgatctgtaggcagctcggcgcagcaagttcgccc 578 Query: 481 agttaccaaatcgaataggactatgtat-ggggaacttactcttgtagggcagacgcaat 539 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 579 agttaccaaatcgaataggactatgtataggggaacttactcttgtagggcagacgcaat 638 Query: 540 gagacatgaacattctattaccatggtcaaacaaaggagtctagttgtcaaaatcgaata 599 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 639 gagacatgaacattctattaccatggtcaaacaaaggagtctggttgtcaaaatcgaata 698 Query: 600 gatcaa 605 |||||| Sbjct: 699 gatcaa 704
>dbj|AK063115.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-D12, full insert sequence Length = 683 Score = 385 bits (194), Expect = e-103 Identities = 339/385 (88%), Gaps = 2/385 (0%) Strand = Plus / Plus Query: 49 gcctccgccaagnaagtccggcgacgtgtcggcgctccagatcggcgtcaagtacaagcc 108 |||||||||||| || |||||||||||| ||| ||||||||||||||||||| ||||||| Sbjct: 103 gcctccgccaagaaa-tccggcgacgtgacggagctccagatcggcgtcaagcacaagcc 161 Query: 109 agaatcgtgcagcatctcggctcacaaaggagacagagttaaagttcactaccgtggaac 168 |||||| |||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 162 agaatcctgcagcattcaagctcacaaaggcgacagagttaaagttcactaccgtggaaa 221 Query: 169 acttaccgatggnaacagtttttgattctagctatgaaaggggtgacccaattgaatttg 228 |||||| ||||| ||||| ||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 222 acttactgatgg-aacagattttgattctagctatgaaagaggtgacccaatcgaatttg 280 Query: 229 aattgggcactggtcaagtgatcaaaggatgggatcagggaattttgggcatgtgcattg 288 | ||||||||||| |||||||||||||| ||||||||||| ||| ||||||||||| ||| Sbjct: 281 agttgggcactggccaagtgatcaaagggtgggatcagggcattctgggcatgtgcgttg 340 Query: 289 gtgagaagaggaagctgaagatcccttcaaagctcggctacggggatcagggatcaccac 348 | ||||||||||||||||||||||||||||||||||| || || | ||| || ||||| | Sbjct: 341 gcgagaagaggaagctgaagatcccttcaaagctcggttatggtgctcaagggtcaccgc 400 Query: 349 ctaccattccaggcggagcaactctcatattcgacacagagcttgtcgcagtcaatggcg 408 | ||||| || || ||||| |||||||| ||||| || |||||||| || |||||||||| Sbjct: 401 cgaccatccctggtggagcgactctcattttcgataccgagcttgttgctgtcaatggcg 460 Query: 409 agccttctagcaaatcagacgagga 433 |||| | |||||||| || ||||| Sbjct: 461 agccagccagcaaatccgatgagga 485
>gb|AY105607.1| Zea mays PCO107138 mRNA sequence Length = 808 Score = 333 bits (168), Expect = 4e-88 Identities = 316/363 (87%), Gaps = 2/363 (0%) Strand = Plus / Plus Query: 44 tcgtcgcctccgccaagnaagtccggcgacgtgtcggcgctccagatcggcgtcaagtac 103 |||||||| | |||||| || ||||| |||||||||| |||||||||||||||||||||| Sbjct: 148 tcgtcgccacggccaagaaa-tccggggacgtgtcggagctccagatcggcgtcaagtac 206 Query: 104 aagccagaatcgtgcagcatctcggctcacaaaggagacagagttaaagttcactaccgt 163 ||||| ||||| |||||||| ||||||||||| |||| |||||||||||||||||| Sbjct: 207 aagccggaatcatgcagcattcaagctcacaaaggtgacaaggttaaagttcactaccgt 266 Query: 164 ggaacacttaccgatggnaacagtttttgattctagctatgaaaggggtgacccaattga 223 |||| |||||| ||||| ||| ||||||||||| ||||||||||| |||||||| ||||| Sbjct: 267 ggaaaacttactgatgg-aacggtttttgattcaagctatgaaagaggtgacccgattga 325 Query: 224 atttgaattgggcactggtcaagtgatcaaaggatgggatcagggaattttgggcatgtg 283 |||||||||||||||||| |||||||||||||||||||||||||| | |||| ||||| Sbjct: 326 atttgaattgggcactggacaagtgatcaaaggatgggatcagggtctcctgggaatgtg 385 Query: 284 cattggtgagaagaggaagctgaagatcccttcaaagctcggctacggggatcagggatc 343 | ||||||| ||| ||||| |||||||||| |||||||| ||||| ||| ||| || || Sbjct: 386 cgttggtgaaaagcggaagttgaagatcccatcaaagcttggctatgggcctcaaggctc 445 Query: 344 accacctaccattccaggcggagcaactctcatattcgacacagagcttgtcgcagtcaa 403 |||||||| ||||| || |||||||| |||||||| ||||| ||||||||||| ||||| Sbjct: 446 gccacctactattcctggtggagcaaccctcatatttgacacggagcttgtcgctgtcaa 505 Query: 404 tgg 406 ||| Sbjct: 506 tgg 508
>gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBb0004A05, complete sequence Length = 157913 Score = 113 bits (57), Expect = 7e-22 Identities = 85/93 (91%), Gaps = 1/93 (1%) Strand = Plus / Minus Query: 164 ggaacacttaccgatggnaacagtttttgattctagctatgaaaggggtgacccaattga 223 |||| |||||| ||||| ||||| ||||||||||||||||||||| ||||||||||| || Sbjct: 54956 ggaaaacttactgatgg-aacagattttgattctagctatgaaagaggtgacccaatcga 54898 Query: 224 atttgaattgggcactggtcaagtgatcaaagg 256 |||||| ||||||||||| |||||||||||||| Sbjct: 54897 atttgagttgggcactggccaagtgatcaaagg 54865 Score = 103 bits (52), Expect = 7e-19 Identities = 64/68 (94%) Strand = Plus / Minus Query: 258 tgggatcagggaattttgggcatgtgcattggtgagaagaggaagctgaagatcccttca 317 ||||||||||| ||| ||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 54755 tgggatcagggcattctgggcatgtgcgttggcgagaagaggaagctgaagatcccttca 54696 Query: 318 aagctcgg 325 |||||||| Sbjct: 54695 aagctcgg 54688 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 102 acaagccagaatcgtgcagcatctcggctcacaaaggagacagagttaaagttcactacc 161 ||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 55121 acaagccagaatcctgcagcattcaagctcacaaaggcgacagagttaaagttcactacc 55062 Query: 162 gtg 164 ||| Sbjct: 55061 gtg 55059 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/52 (92%), Gaps = 1/52 (1%) Strand = Plus / Minus Query: 49 gcctccgccaagnaagtccggcgacgtgtcggcgctccagatcggcgtcaag 100 |||||||||||| || |||||||||||| ||| ||||||||||||||||||| Sbjct: 56456 gcctccgccaagaaa-tccggcgacgtgacggagctccagatcggcgtcaag 56406 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 358 caggcggagcaactctcatattcgacacagagcttgtcgcagtcaatggcgagccttcta 417 |||| ||||| |||||||| ||||| || |||||||| || |||||||||||||| | | Sbjct: 54425 caggtggagcgactctcattttcgataccgagcttgttgctgtcaatggcgagccagcca 54366 Query: 418 gcaaatcagacgagga 433 ||||||| || ||||| Sbjct: 54365 gcaaatccgatgagga 54350
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 113 bits (57), Expect = 7e-22 Identities = 85/93 (91%), Gaps = 1/93 (1%) Strand = Plus / Minus Query: 164 ggaacacttaccgatggnaacagtttttgattctagctatgaaaggggtgacccaattga 223 |||| |||||| ||||| ||||| ||||||||||||||||||||| ||||||||||| || Sbjct: 19124543 ggaaaacttactgatgg-aacagattttgattctagctatgaaagaggtgacccaatcga 19124485 Query: 224 atttgaattgggcactggtcaagtgatcaaagg 256 |||||| ||||||||||| |||||||||||||| Sbjct: 19124484 atttgagttgggcactggccaagtgatcaaagg 19124452 Score = 103 bits (52), Expect = 7e-19 Identities = 64/68 (94%) Strand = Plus / Minus Query: 258 tgggatcagggaattttgggcatgtgcattggtgagaagaggaagctgaagatcccttca 317 ||||||||||| ||| ||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 19124342 tgggatcagggcattctgggcatgtgcgttggcgagaagaggaagctgaagatcccttca 19124283 Query: 318 aagctcgg 325 |||||||| Sbjct: 19124282 aagctcgg 19124275 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 102 acaagccagaatcgtgcagcatctcggctcacaaaggagacagagttaaagttcactacc 161 ||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 19124708 acaagccagaatcctgcagcattcaagctcacaaaggcgacagagttaaagttcactacc 19124649 Query: 162 gtg 164 ||| Sbjct: 19124648 gtg 19124646 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 358 caggcggagcaactctcatattcgacacagagcttgtcgcagtcaatggcgagccttcta 417 |||| ||||| |||||||| ||||| || |||||||| || |||||||||||||| | | Sbjct: 19124012 caggtggagcgactctcattttcgataccgagcttgttgctgtcaatggcgagccagcca 19123953 Query: 418 gcaaatcagacgagga 433 ||||||| || ||||| Sbjct: 19123952 gcaaatccgatgagga 19123937 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 25 gtcgccgccgcgctcctgctcgtcgcctccgcc 57 ||||||||||| ||||| ||||||||| ||||| Sbjct: 16876501 gtcgccgccgccctcctcctcgtcgccgccgcc 16876533
>gb|U52045.1|VFU52045 Vicia faba immunophilin precursor (FKBP15) mRNA, complete cds Length = 750 Score = 87.7 bits (44), Expect = 4e-14 Identities = 128/156 (82%) Strand = Plus / Plus Query: 239 tggtcaagtgatcaaaggatgggatcagggaattttgggcatgtgcattggtgagaagag 298 |||||||||||||||||||||||| || ||| | ||||| ||||| ||||||||||| | Sbjct: 329 tggtcaagtgatcaaaggatgggaccaaggattattgggaatgtgtcttggtgagaagcg 388 Query: 299 gaagctgaagatcccttcaaagctcggctacggggatcagggatcaccacctaccattcc 358 || ||||| ||||| |||| || ||||| || || ||||| || ||||| || ||||| Sbjct: 389 aaaactgaaaatcccagcaaaacttggctatggagagcagggttccccaccaactattcc 448 Query: 359 aggcggagcaactctcatattcgacacagagcttgt 394 ||| || ||||| || ||||| ||||| |||||||| Sbjct: 449 aggtggtgcaacacttatatttgacactgagcttgt 484
>ref|NM_189935.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 432 Score = 60.0 bits (30), Expect = 9e-06 Identities = 115/142 (80%), Gaps = 1/142 (0%) Strand = Plus / Plus Query: 86 cagatcggcgtcaagtacaagccagaatcgtgcagcatctcggctcacaaaggagacaga 145 |||||||| || |||||||||||||| || |||| | | |||||||||||||||| | Sbjct: 76 cagatcggtgtgaagtacaagccagagtcatgcaccctgcaagctcacaaaggagacaaa 135 Query: 146 gttaaagttcactaccgtggaacacttaccgatggnaacagtttttgattctagctatga 205 | ||||| || || ||||| |||| || ||||| | |||| ||||||||||||||||| Sbjct: 136 atcaaagtgcattatcgtgggtcactcactgatgg-atcagtgtttgattctagctatga 194 Query: 206 aaggggtgacccaattgaattt 227 || |||||||| |||||||| Sbjct: 195 cagaggtgacccctttgaattt 216
>dbj|AK103859.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148P20, full insert sequence Length = 713 Score = 60.0 bits (30), Expect = 9e-06 Identities = 115/142 (80%), Gaps = 1/142 (0%) Strand = Plus / Plus Query: 86 cagatcggcgtcaagtacaagccagaatcgtgcagcatctcggctcacaaaggagacaga 145 |||||||| || |||||||||||||| || |||| | | |||||||||||||||| | Sbjct: 135 cagatcggtgtgaagtacaagccagagtcatgcaccctgcaagctcacaaaggagacaaa 194 Query: 146 gttaaagttcactaccgtggaacacttaccgatggnaacagtttttgattctagctatga 205 | ||||| || || ||||| |||| || ||||| | |||| ||||||||||||||||| Sbjct: 195 atcaaagtgcattatcgtgggtcactcactgatgg-atcagtgtttgattctagctatga 253 Query: 206 aaggggtgacccaattgaattt 227 || |||||||| |||||||| Sbjct: 254 cagaggtgacccctttgaattt 275
>ref|XM_367309.1| Magnaporthe grisea 70-15 hypothetical protein (MG07234.4) partial mRNA Length = 603 Score = 48.1 bits (24), Expect = 0.034 Identities = 48/56 (85%) Strand = Plus / Plus Query: 245 agtgatcaaaggatgggatcagggaattttgggcatgtgcattggtgagaagagga 300 |||||| || || |||||||| ||| | |||| |||||||||||| |||||||||| Sbjct: 273 agtgattaagggctgggatcaaggattgttggacatgtgcattggcgagaagagga 328
>gb|AC171266.22| Medicago truncatula clone mth2-14o4, complete sequence Length = 137052 Score = 48.1 bits (24), Expect = 0.034 Identities = 87/108 (80%) Strand = Plus / Plus Query: 254 aggatgggatcagggaattttgggcatgtgcattggtgagaagaggaagctgaagatccc 313 ||||||||| || ||| | ||||| ||||| ||||||||||| | || ||||| || || Sbjct: 19766 aggatgggaccaaggattattgggaatgtgtcttggtgagaagcgaaaactgaaaatacc 19825 Query: 314 ttcaaagctcggctacggggatcagggatcaccacctaccattccagg 361 |||| ||||||||||| || ||||| || ||||| || |||||||| Sbjct: 19826 agcaaaactcggctacggagagcagggttccccacccactattccagg 19873 Score = 42.1 bits (21), Expect = 2.1 Identities = 76/93 (81%), Gaps = 1/93 (1%) Strand = Plus / Plus Query: 164 ggaacacttaccgatggnaacagtttttgattctagctatgaaaggggtgacccaattga 223 |||| ||| |||||||| ||| ||||| |||||||||| |||||| | |||||||||| Sbjct: 18491 ggaaaactcaccgatgg-aactgttttcgattctagctttgaaagaaataacccaattga 18549 Query: 224 atttgaattgggcactggtcaagtgatcaaagg 256 ||||| | || |||||||||||||||||| Sbjct: 18550 ttttgagcttggtggtggtcaagtgatcaaagg 18582
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.034 Identities = 39/44 (88%) Strand = Plus / Minus Query: 184 cagtttttgattctagctatgaaaggggtgacccaattgaattt 227 |||| ||||||||||||||||| || |||||||| |||||||| Sbjct: 39908283 cagtgtttgattctagctatgacagaggtgacccctttgaattt 39908240 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 536 caatgagacatgaacattct 555 |||||||||||||||||||| Sbjct: 3559373 caatgagacatgaacattct 3559354
>dbj|AP003433.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0004D12 Length = 138136 Score = 48.1 bits (24), Expect = 0.034 Identities = 39/44 (88%) Strand = Plus / Minus Query: 184 cagtttttgattctagctatgaaaggggtgacccaattgaattt 227 |||| ||||||||||||||||| || |||||||| |||||||| Sbjct: 88991 cagtgtttgattctagctatgacagaggtgacccctttgaattt 88948
>ref|XM_478685.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1008 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 24 cgtcgccgccgcgctcctgctcg 46 ||||||||||||||||||||||| Sbjct: 12 cgtcgccgccgcgctcctgctcg 34
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 24 cgtcgccgccgcgctcctgctcg 46 ||||||||||||||||||||||| Sbjct: 22204863 cgtcgccgccgcgctcctgctcg 22204841 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 22 gtcgtcgccgccgcgctcctgctcgtcgcctcc 54 ||||||||||||||| | |||||||||||||| Sbjct: 24427076 gtcgtcgccgccgcggccgtgctcgtcgcctcc 24427108 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 26 tcgccgccgcgctcctgctcgtcgc 50 |||||||||||||||| |||||||| Sbjct: 21067775 tcgccgccgcgctcctcctcgtcgc 21067799
>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0567H04 Length = 181420 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 24 cgtcgccgccgcgctcctgctcg 46 ||||||||||||||||||||||| Sbjct: 10109 cgtcgccgccgcgctcctgctcg 10087
>gb|AC167718.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940130D9, complete sequence Length = 117683 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 ctgctggtcgtcgccgccgcgc 37 |||||||||||||||||||||| Sbjct: 40571 ctgctggtcgtcgccgccgcgc 40550
>ref|NM_022600.1| Rattus norvegicus adenylate cyclase 5 (Adcy5), mRNA Length = 4847 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 22 gtcgtcgccgccgcgctcctgc 43 |||||||||||||||||||||| Sbjct: 766 gtcgtcgccgccgcgctcctgc 745
>ref|NM_183357.1| Homo sapiens adenylate cyclase 5 (ADCY5), mRNA Length = 3842 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 22 gtcgtcgccgccgcgctcctgc 43 |||||||||||||||||||||| Sbjct: 330 gtcgtcgccgccgcgctcctgc 309
>gb|AC098833.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1288_A07, complete sequence Length = 122120 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 20 tggtcgtcgccgccgcgctcctgctc 45 |||| ||||||||||||||||||||| Sbjct: 18598 tggtggtcgccgccgcgctcctgctc 18623
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 26 tcgccgccgcgctcctgctcgtcgcctccg 55 |||||| ||||||| ||||||||||||||| Sbjct: 1786254 tcgccggcgcgctcgtgctcgtcgcctccg 1786225
>ref|XM_580301.2| PREDICTED: Bos taurus similar to adenylate cyclase 5 (LOC538432), mRNA Length = 1701 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 22 gtcgtcgccgccgcgctcctgc 43 |||||||||||||||||||||| Sbjct: 870 gtcgtcgccgccgcgctcctgc 849
>gb|AC167662.6| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940141D9, complete sequence Length = 117679 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 16 ctgctggtcgtcgccgccgcgc 37 |||||||||||||||||||||| Sbjct: 77111 ctgctggtcgtcgccgccgcgc 77132
>emb|Z29371.1|OCMRADCYV O.cuniculus mRNA for adenylyl cyclase type V Length = 4995 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 22 gtcgtcgccgccgcgctcctgc 43 |||||||||||||||||||||| Sbjct: 924 gtcgtcgccgccgcgctcctgc 903
>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29 Length = 302007 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 25 gtcgccgccgcgctcctgctcg 46 |||||||||||||||||||||| Sbjct: 230604 gtcgccgccgcgctcctgctcg 230625
>gb|AC025571.20| Homo sapiens 3 BAC RP11-515C21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 159902 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 22 gtcgtcgccgccgcgctcctgc 43 |||||||||||||||||||||| Sbjct: 94923 gtcgtcgccgccgcgctcctgc 94944
>dbj|AB227133.1| Aspergillus oryzae cDNA, contig sequence: AoEST3996 Length = 569 Score = 44.1 bits (22), Expect = 0.53 Identities = 37/42 (88%) Strand = Plus / Plus Query: 255 ggatgggatcagggaattttgggcatgtgcattggtgagaag 296 ||||||||| |||| |||||| |||||||||||||||||| Sbjct: 325 ggatgggatgagggtcttttggatatgtgcattggtgagaag 366
>tpg|BK000371.1| TPA: TPA_exp: Homo sapiens adenylyl cyclase type V (ADCY5) mRNA, partial cds Length = 1134 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 22 gtcgtcgccgccgcgctcctgc 43 |||||||||||||||||||||| Sbjct: 330 gtcgtcgccgccgcgctcctgc 309
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 20 tggtcgtcgccgccgcgctcctgctc 45 |||| ||||||||||||||||||||| Sbjct: 26736659 tggtggtcgccgccgcgctcctgctc 26736684
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 10 ctctgcctgctggtcgtcgccg 31 |||||||||||||||||||||| Sbjct: 2456257 ctctgcctgctggtcgtcgccg 2456278
>dbj|AK102925.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114D17, full insert sequence Length = 1474 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 20 tggtcgtcgccgccgcgctcctgctc 45 |||| ||||||||||||||||||||| Sbjct: 73 tggtggtcgccgccgcgctcctgctc 98
>gb|M88649.1|DOGADNCYC Canis familiaris adenylyl cyclase type V mRNA, partial cds Length = 4545 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 22 gtcgtcgccgccgcgctcctgc 43 |||||||||||||||||||||| Sbjct: 474 gtcgtcgccgccgcgctcctgc 453
>gb|M96159.1|RATADCYA Rattus norvegicus adenylyl cyclase type V mRNA, complete cds Length = 4847 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 22 gtcgtcgccgccgcgctcctgc 43 |||||||||||||||||||||| Sbjct: 766 gtcgtcgccgccgcgctcctgc 745
>gb|M97886.1|DOGADCYC Canis familiaris adenylyl cyclase (truncated form) mRNA, complete cds, Length = 2429 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 22 gtcgtcgccgccgcgctcctgc 43 |||||||||||||||||||||| Sbjct: 287 gtcgtcgccgccgcgctcctgc 266
>ref|NM_185884.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2088 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 26 tcgccgccgcgctcctgctcgtcgc 50 |||||||||||||||| |||||||| Sbjct: 29 tcgccgccgcgctcctcctcgtcgc 53
>ref|XM_513867.1| PREDICTED: Pan troglodytes LOC457376 (LOC457376), mRNA Length = 1393 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 gcttcttctctgcctgctggt 23 ||||||||||||||||||||| Sbjct: 142 gcttcttctctgcctgctggt 122
>gb|AY596298.1| Haloarcula marismortui ATCC 43049 chromosome II, complete sequence Length = 288050 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 18 gctggtcgtcgccgccgcgctcctg 42 ||||||||||| ||||||||||||| Sbjct: 168087 gctggtcgtcgtcgccgcgctcctg 168063
>gb|BC004291.1| Homo sapiens synaptotagmin XI, mRNA (cDNA clone MGC:10881 IMAGE:3621175), complete cds Length = 2950 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 gcttcttctctgcctgctggt 23 ||||||||||||||||||||| Sbjct: 325 gcttcttctctgcctgctggt 305
>ref|XM_870499.1| PREDICTED: Bos taurus similar to Synaptotagmin-11 (Synaptotagmin XI) (SytXI) (LOC618177), mRNA Length = 1514 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 gcttcttctctgcctgctggt 23 ||||||||||||||||||||| Sbjct: 363 gcttcttctctgcctgctggt 343
>ref|NM_018804.2| Mus musculus synaptotagmin XI (Syt11), mRNA Length = 3510 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 gcttcttctctgcctgctggt 23 ||||||||||||||||||||| Sbjct: 358 gcttcttctctgcctgctggt 338
>ref|XM_001005820.1| PREDICTED: Mus musculus similar to synaptotagmin XI (LOC673549), mRNA Length = 879 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 gcttcttctctgcctgctggt 23 ||||||||||||||||||||| Sbjct: 121 gcttcttctctgcctgctggt 101
>ref|XM_981500.1| PREDICTED: Mus musculus synaptotagmin XI (Syt11), mRNA Length = 1215 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 gcttcttctctgcctgctggt 23 ||||||||||||||||||||| Sbjct: 121 gcttcttctctgcctgctggt 101
>gb|AC127347.4| Mus musculus BAC clone RP23-54N12 from chromosome 18, complete sequence Length = 220483 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 541 agacatgaacattctattacc 561 ||||||||||||||||||||| Sbjct: 208537 agacatgaacattctattacc 208517
>gb|AC126686.3| Mus musculus BAC clone RP23-148C24 from 18, complete sequence Length = 232817 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 541 agacatgaacattctattacc 561 ||||||||||||||||||||| Sbjct: 4039 agacatgaacattctattacc 4019
>emb|AL139128.24| Human DNA sequence from clone RP11-101O6 on chromosome 1 Contains the gene for a novel protein (FLJ20203), a proteasome (prosome, macropain) 26S subunit non-ATPase 7 (Mov34 homolog) (PSMD7) pseudogene, the SYT11 gene for synaptotagmin XI. the 3' end of RIT1 Ras-like without CAAX 1 and the 5' end of the gene for a novel protein (FLJ20203), complete sequence Length = 144833 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 gcttcttctctgcctgctggt 23 ||||||||||||||||||||| Sbjct: 104585 gcttcttctctgcctgctggt 104565
>gb|AC083845.15| Homo sapiens, clone RP11-459L5, complete sequence Length = 132843 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 509 ggggaacttactcttgtagggcaga 533 |||||||||||||||||| |||||| Sbjct: 40425 ggggaacttactcttgtaaggcaga 40449
>gb|BC039205.1| Homo sapiens synaptotagmin XI, mRNA (cDNA clone MGC:26698 IMAGE:4819614), complete cds Length = 5103 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 gcttcttctctgcctgctggt 23 ||||||||||||||||||||| Sbjct: 395 gcttcttctctgcctgctggt 375
>gb|BC054526.1| Mus musculus synaptotagmin XI, mRNA (cDNA clone MGC:62226 IMAGE:5698412), complete cds Length = 3510 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 gcttcttctctgcctgctggt 23 ||||||||||||||||||||| Sbjct: 358 gcttcttctctgcctgctggt 338
>emb|CR749792.1| Homo sapiens mRNA; cDNA DKFZp781D015 (from clone DKFZp781D015) Length = 3505 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 gcttcttctctgcctgctggt 23 ||||||||||||||||||||| Sbjct: 340 gcttcttctctgcctgctggt 320
>dbj|AK074931.1| Homo sapiens cDNA FLJ90450 fis, clone NT2RP3001388, highly similar to Synaptotagmin XI (SytXI) Length = 3691 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 gcttcttctctgcctgctggt 23 ||||||||||||||||||||| Sbjct: 337 gcttcttctctgcctgctggt 317
>dbj|AK027540.1| Homo sapiens cDNA FLJ14634 fis, clone NT2RP2001081, moderately similar to SYNAPTOTAGMIN IV Length = 2315 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 gcttcttctctgcctgctggt 23 ||||||||||||||||||||| Sbjct: 337 gcttcttctctgcctgctggt 317
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 256 gatgggatcagggaattttgggcatgtgcattggtgagaag 296 |||||||| |||| |||||| |||||||||||||||||| Sbjct: 4024920 gatgggatgagggtcttttggatatgtgcattggtgagaag 4024960
>dbj|AK133414.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4933421O05 product:synaptotagmin 11, full insert sequence Length = 2341 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 gcttcttctctgcctgctggt 23 ||||||||||||||||||||| Sbjct: 844 gcttcttctctgcctgctggt 824
>dbj|AK144169.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:G430061N11 product:synaptotagmin 11, full insert sequence Length = 2629 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 gcttcttctctgcctgctggt 23 ||||||||||||||||||||| Sbjct: 335 gcttcttctctgcctgctggt 315
>dbj|AK164368.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130075L09 product:synaptotagmin 11, full insert sequence Length = 2661 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 gcttcttctctgcctgctggt 23 ||||||||||||||||||||| Sbjct: 370 gcttcttctctgcctgctggt 350
>dbj|AK158745.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K230309O16 product:synaptotagmin 11, full insert sequence Length = 2607 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 gcttcttctctgcctgctggt 23 ||||||||||||||||||||| Sbjct: 313 gcttcttctctgcctgctggt 293
>dbj|AK164082.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530003N14 product:synaptotagmin 11, full insert sequence Length = 1222 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 gcttcttctctgcctgctggt 23 ||||||||||||||||||||| Sbjct: 335 gcttcttctctgcctgctggt 315
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 gctggtcgtcgccgccgcgct 38 ||||||||||||||||||||| Sbjct: 3100177 gctggtcgtcgccgccgcgct 3100197
>gb|AC022468.5|AC022468 Homo sapiens chromosome 15 clone RP11-546B15 map 15q15, complete sequence Length = 183539 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 tttgattctagctatgaaagg 209 ||||||||||||||||||||| Sbjct: 117504 tttgattctagctatgaaagg 117524
>dbj|D38522.2|HUMORF002 Homo sapiens KIAA0080 mRNA, partial cds Length = 5974 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 gcttcttctctgcctgctggt 23 ||||||||||||||||||||| Sbjct: 364 gcttcttctctgcctgctggt 344
>gb|AC103817.6| Homo sapiens chromosome 8, clone CTD-3083F21, complete sequence Length = 203148 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 509 ggggaacttactcttgtagggcaga 533 |||||||||||||||||| |||||| Sbjct: 164001 ggggaacttactcttgtaaggcaga 164025
>ref|NM_152280.2| Homo sapiens synaptotagmin XI (SYT11), mRNA Length = 5103 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 gcttcttctctgcctgctggt 23 ||||||||||||||||||||| Sbjct: 395 gcttcttctctgcctgctggt 375
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 gccgcgctcctgctcgtcgcc 51 ||||||||||||||||||||| Sbjct: 1769126 gccgcgctcctgctcgtcgcc 1769146
>dbj|AP003863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1058_A12 Length = 152269 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 26 tcgccgccgcgctcctgctcgtcgc 50 |||||||||||||||| |||||||| Sbjct: 111074 tcgccgccgcgctcctcctcgtcgc 111098
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 gctggtcgtcgccgccgcgct 38 ||||||||||||||||||||| Sbjct: 1767638 gctggtcgtcgccgccgcgct 1767658
>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0488D02 Length = 154537 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 25 gtcgccgccgcgctcctgctcgtcgcctccgcc 57 ||||||||||| ||||| ||||||||| ||||| Sbjct: 6314 gtcgccgccgccctcctcctcgtcgccgccgcc 6346
>dbj|AP005559.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1163_C07 Length = 107121 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 25 gtcgccgccgcgctcctgctcgtcgcctccgcc 57 ||||||||||| ||||| ||||||||| ||||| Sbjct: 74192 gtcgccgccgccctcctcctcgtcgccgccgcc 74224
>dbj|AP003840.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1634_B10 Length = 100294 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 22 gtcgtcgccgccgcgctcctgctcgtcgcctcc 54 ||||||||||||||| | |||||||||||||| Sbjct: 52943 gtcgtcgccgccgcggccgtgctcgtcgcctcc 52975
>dbj|AK072941.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150F04, full insert sequence Length = 1738 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 25 gtcgccgccgcgctcctgctcgtcgcctccgcc 57 ||||||||||| ||||| ||||||||| ||||| Sbjct: 167 gtcgccgccgccctcctcctcgtcgccgccgcc 199
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cgccgcgctcctgctcgtcgc 50 ||||||||||||||||||||| Sbjct: 2205561 cgccgcgctcctgctcgtcgc 2205541
>dbj|AK062254.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-G06, full insert sequence Length = 1642 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 25 gtcgccgccgcgctcctgctcgtcgcctccgcc 57 ||||||||||| ||||| ||||||||| ||||| Sbjct: 112 gtcgccgccgccctcctcctcgtcgccgccgcc 144
>gb|AC134246.4| Mus musculus BAC clone RP23-199B2 from 3, complete sequence Length = 206439 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 gcttcttctctgcctgctggt 23 ||||||||||||||||||||| Sbjct: 167532 gcttcttctctgcctgctggt 167552
>gb|BC013690.1| Homo sapiens synaptotagmin XI, mRNA (cDNA clone MGC:17226 IMAGE:4179089), complete cds Length = 2378 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 gcttcttctctgcctgctggt 23 ||||||||||||||||||||| Sbjct: 372 gcttcttctctgcctgctggt 352
>gb|AC124443.3| Mus musculus chromosome 18 clone RP24-178K3, complete sequence Length = 169326 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 541 agacatgaacattctattacc 561 ||||||||||||||||||||| Sbjct: 65856 agacatgaacattctattacc 65876
>dbj|AB026808.1| Mus musculus mRNA for synaptotagmin XI, complete cds Length = 1293 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 gcttcttctctgcctgctggt 23 ||||||||||||||||||||| Sbjct: 142 gcttcttctctgcctgctggt 122
>ref|NM_113428.2| Arabidopsis thaliana FKBP15-1; FK506 binding / peptidyl-prolyl cis-trans isomerase AT3G25220 (FKBP15-1) mRNA, complete cds Length = 684 Score = 40.1 bits (20), Expect = 8.2 Identities = 65/80 (81%) Strand = Plus / Plus Query: 189 tttgattctagctatgaaaggggtgacccaattgaatttgaattgggcactggtcaagtg 248 |||||||| || | ||| || |||||||| ||||| ||||| | || ||||||||||| Sbjct: 278 tttgattcaagttttgagagaggtgaccctattgagtttgagcttggaactggtcaagtc 337 Query: 249 atcaaaggatgggatcaggg 268 ||| ||||||||| ||||| Sbjct: 338 atcccaggatgggaccaggg 357
>gb|AY423023.1| Danio rerio KIAA1376-like protein mRNA, complete cds Length = 2687 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 atcagggaattttgggcatg 281 |||||||||||||||||||| Sbjct: 1776 atcagggaattttgggcatg 1795
>ref|XM_636926.1| Dictyostelium discoideum hypothetical protein (DDB0204309), partial mRNA Length = 483 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 241 gtcaagtgatcaaaggatgggatcaggg 268 ||||||| ||||||||||||||| |||| Sbjct: 314 gtcaagtcatcaaaggatgggatgaggg 341
>ref|XM_483092.1| Oryza sativa (japonica cultivar-group), mRNA Length = 816 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tcgccgccgcgctcctgctcgtcg 49 |||||||||||||||| ||||||| Sbjct: 17 tcgccgccgcgctcctcctcgtcg 40
>gb|BT017943.1| Zea mays clone EL01N0521C09.c mRNA sequence Length = 1203 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 tcgtcgccgccgcgctcctgctcg 46 |||||||||||||| ||||||||| Sbjct: 454 tcgtcgccgccgcgttcctgctcg 477
>gb|AC008337.8| Drosophila melanogaster clone BACR02B03, complete sequence Length = 169680 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 attttgggcatgtgcattgg 289 |||||||||||||||||||| Sbjct: 91522 attttgggcatgtgcattgg 91503
>gb|AC012376.12| Drosophila melanogaster clone BACR48C12, complete sequence Length = 183048 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 attttgggcatgtgcattgg 289 |||||||||||||||||||| Sbjct: 43735 attttgggcatgtgcattgg 43716
>ref|XM_426415.1| PREDICTED: Gallus gallus similar to SH3 and multiple ankyrin repeat domains 2 isoform 1; cortactin SH3 domain-binding protein; cortactin binding protein 1; GKAP/SAPAP interacting protein (LOC428858), mRNA Length = 10242 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 131 cacaaaggagacagagttaaagtt 154 ||||||||||||||||| |||||| Sbjct: 3517 cacaaaggagacagagtaaaagtt 3540
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tcgccgccgcgctcctgctcgtcg 49 ||||||||||||||||| |||||| Sbjct: 676804 tcgccgccgcgctcctgatcgtcg 676827
>gb|AC112789.4| Mus musculus BAC clone RP23-151J21 from chromosome 7, complete sequence Length = 200592 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 537 aatgagacatgaacattcta 556 |||||||||||||||||||| Sbjct: 55978 aatgagacatgaacattcta 55959
>gb|BT012057.1| Arabidopsis thaliana At3g25220 mRNA sequence Length = 387 Score = 40.1 bits (20), Expect = 8.2 Identities = 65/80 (81%) Strand = Plus / Plus Query: 189 tttgattctagctatgaaaggggtgacccaattgaatttgaattgggcactggtcaagtg 248 |||||||| || | ||| || |||||||| ||||| ||||| | || ||||||||||| Sbjct: 130 tttgattcaagttttgagagaggtgaccctattgagtttgagcttggaactggtcaagtc 189 Query: 249 atcaaaggatgggatcaggg 268 ||| ||||||||| ||||| Sbjct: 190 atcccaggatgggaccaggg 209
>gb|AC158586.8| Mus musculus chromosome 5, clone RP24-372A2, complete sequence Length = 196167 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 tggtgagaagaggaagctga 306 |||||||||||||||||||| Sbjct: 60891 tggtgagaagaggaagctga 60910
>emb|AL591784.1|SME591784 Sinorhizobium meliloti 1021 complete chromosome; segment 3/12 Length = 300000 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 gtcgccgccgcgctcctgct 44 |||||||||||||||||||| Sbjct: 161973 gtcgccgccgcgctcctgct 161992
>gb|AC124418.4| Mus musculus BAC clone RP24-318G17 from chromosome 18, complete sequence Length = 167998 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 tggtgagaagaggaagctga 306 |||||||||||||||||||| Sbjct: 16958 tggtgagaagaggaagctga 16939
>gb|AC125402.3| Mus musculus BAC clone RP24-539G2 from chromosome 5, complete sequence Length = 163773 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 tggtgagaagaggaagctga 306 |||||||||||||||||||| Sbjct: 45771 tggtgagaagaggaagctga 45752
>gb|AC122256.3| Mus musculus BAC clone RP23-178H7 from 7, complete sequence Length = 183325 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 537 aatgagacatgaacattcta 556 |||||||||||||||||||| Sbjct: 94450 aatgagacatgaacattcta 94431
>gb|AY281354.1| Uncultured Acidobacteria bacterium clone 38c7 genomic sequence Length = 39263 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 gccgccgcgctcctgctcgtcgcc 51 ||||||| |||||||||||||||| Sbjct: 29023 gccgccgtgctcctgctcgtcgcc 29046
>emb|CR682331.2|CNS0FPFR Tetraodon nigroviridis full-length cDNA Length = 805 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 tcgccgccgcgctcctgctc 45 |||||||||||||||||||| Sbjct: 258 tcgccgccgcgctcctgctc 277
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 gcctgctggtcgtcgccgccgcgc 37 |||||||||||| ||||||||||| Sbjct: 417184 gcctgctggtcgacgccgccgcgc 417207
>emb|AL162853.17| Human DNA sequence from clone RP11-363G2 on chromosome 13 Contains a ribosomal protein L7a (RPL7A) pseudogene, a pseudogene similar to part of inositol hexakisphosphate kinase 1 (IHPK1) (KIAA0263), a novel pseudogene, a novel gene and 2 CpG islands, complete sequence Length = 123693 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 gctgaagatcccttcaaagc 321 |||||||||||||||||||| Sbjct: 24849 gctgaagatcccttcaaagc 24830
>emb|AL353710.7| Human DNA sequence from clone RP11-470P4 on chromosome 9 Contains a novel gene, the 5' end of the CHAC gene for chorea acanthocytosis and a CpG island, complete sequence Length = 110633 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 actctcatattcgacacaga 388 |||||||||||||||||||| Sbjct: 63618 actctcatattcgacacaga 63599
>emb|X78671.1|HVCHT2A H.vulgare mRNA for chitinase 2a Length = 1028 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 cgccgccgcgctcctgctcg 46 |||||||||||||||||||| Sbjct: 88 cgccgccgcgctcctgctcg 107
>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16 Length = 349497 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 cgtcgccgccgcgctcctgc 43 |||||||||||||||||||| Sbjct: 41887 cgtcgccgccgcgctcctgc 41906
>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14 Length = 348257 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 cgtcgccgccgcgctcctgc 43 |||||||||||||||||||| Sbjct: 286411 cgtcgccgccgcgctcctgc 286430
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tcgccgccgcgctcctgctcgtcg 49 ||||||||||||||||| |||||| Sbjct: 1995887 tcgccgccgcgctcctgatcgtcg 1995910
>emb|BX530062.10| Zebrafish DNA sequence from clone DKEY-13M1 in linkage group 11, complete sequence Length = 144678 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 atcagggaattttgggcatg 281 |||||||||||||||||||| Sbjct: 132890 atcagggaattttgggcatg 132909
>gb|AY128760.1| Arabidopsis thaliana immunophilin (At3g25220) mRNA, complete cds Length = 519 Score = 40.1 bits (20), Expect = 8.2 Identities = 65/80 (81%) Strand = Plus / Plus Query: 189 tttgattctagctatgaaaggggtgacccaattgaatttgaattgggcactggtcaagtg 248 |||||||| || | ||| || |||||||| ||||| ||||| | || ||||||||||| Sbjct: 205 tttgattcaagttttgagagaggtgaccctattgagtttgagcttggaactggtcaagtc 264 Query: 249 atcaaaggatgggatcaggg 268 ||| ||||||||| ||||| Sbjct: 265 atcccaggatgggaccaggg 284
>gb|AE012415.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 323 of 460 of the complete genome Length = 10220 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 ctgctggtcgtcgccgccgc 35 |||||||||||||||||||| Sbjct: 10135 ctgctggtcgtcgccgccgc 10154
>ref|NM_029714.1| Mus musculus RIKEN cDNA 1700067C01 gene (1700067C01Rik), mRNA Length = 4456 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 537 aatgagacatgaacattcta 556 |||||||||||||||||||| Sbjct: 4153 aatgagacatgaacattcta 4134
>ref|NM_133149.2| Drosophila melanogaster CG8051-RA (CG8051), mRNA Length = 2567 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 attttgggcatgtgcattgg 289 |||||||||||||||||||| Sbjct: 1945 attttgggcatgtgcattgg 1964
>gb|AY069861.1| Drosophila melanogaster SD10554 full length cDNA Length = 2548 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 attttgggcatgtgcattgg 289 |||||||||||||||||||| Sbjct: 1914 attttgggcatgtgcattgg 1933
>gb|AY062776.1| Arabidopsis thaliana immunophilin (At3g25220; MJL12.17) mRNA, complete cds Length = 639 Score = 40.1 bits (20), Expect = 8.2 Identities = 65/80 (81%) Strand = Plus / Plus Query: 189 tttgattctagctatgaaaggggtgacccaattgaatttgaattgggcactggtcaagtg 248 |||||||| || | ||| || |||||||| ||||| ||||| | || ||||||||||| Sbjct: 233 tttgattcaagttttgagagaggtgaccctattgagtttgagcttggaactggtcaagtc 292 Query: 249 atcaaaggatgggatcaggg 268 ||| ||||||||| ||||| Sbjct: 293 atcccaggatgggaccaggg 312
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 ctgctggtcgtcgccgccgc 35 |||||||||||||||||||| Sbjct: 1373067 ctgctggtcgtcgccgccgc 1373048
>dbj|AK077059.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932441M08 product:hypothetical P-loop containing nucleotide triphosphate hydrolases structure containing protein, full insert sequence Length = 4456 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 537 aatgagacatgaacattcta 556 |||||||||||||||||||| Sbjct: 4153 aatgagacatgaacattcta 4134
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 tcgccgccgcgctcctgctcgtcg 49 ||||||||||||||||| |||||| Sbjct: 805756 tcgccgccgcgctcctgatcgtcg 805733
>gb|AC102411.12| Mus musculus chromosome 18, clone RP24-374D7, complete sequence Length = 171918 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 tggtgagaagaggaagctga 306 |||||||||||||||||||| Sbjct: 99922 tggtgagaagaggaagctga 99903
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tcgccgccgcgctcctgctcgtcg 49 |||||||||||||||| ||||||| Sbjct: 24245551 tcgccgccgcgctcctcctcgtcg 24245574
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 24 cgtcgccgccgcgctcctgctcgtcgcc 51 |||||||||||| ||||| ||||||||| Sbjct: 8843300 cgtcgccgccgcactcctcctcgtcgcc 8843273
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 tcgccgccgcgctcctgctc 45 |||||||||||||||||||| Sbjct: 3033345 tcgccgccgcgctcctgctc 3033364
>dbj|AP003339.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1276_B06 Length = 175174 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 536 caatgagacatgaacattct 555 |||||||||||||||||||| Sbjct: 127441 caatgagacatgaacattct 127422
>dbj|AP004801.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0613F08 Length = 142937 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 24 cgtcgccgccgcgctcctgctcgtcgcc 51 |||||||||||| ||||| ||||||||| Sbjct: 48318 cgtcgccgccgcactcctcctcgtcgcc 48291
>dbj|AP004620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0605H02 Length = 175547 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tcgccgccgcgctcctgctcgtcg 49 |||||||||||||||| ||||||| Sbjct: 111890 tcgccgccgcgctcctcctcgtcg 111913
>dbj|AP006844.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0052K15 Length = 156250 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 24 cgtcgccgccgcgctcctgctcgtcgcc 51 |||||||||||| ||||| ||||||||| Sbjct: 142379 cgtcgccgccgcactcctcctcgtcgcc 142352
>dbj|AK103464.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033129N01, full insert sequence Length = 1303 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 24 cgtcgccgccgcgctcctgctcgtcgcc 51 |||||||||||| ||||| ||||||||| Sbjct: 49 cgtcgccgccgcactcctcctcgtcgcc 76
>dbj|AK101438.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033039D20, full insert sequence Length = 1222 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 24 cgtcgccgccgcgctcctgctcgtcgcc 51 |||||||||||| ||||| ||||||||| Sbjct: 49 cgtcgccgccgcactcctcctcgtcgcc 76
>gb|AY104796.1| Zea mays PCO077238 mRNA sequence Length = 1355 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 tcgtcgccgccgcgctcctgctcg 46 |||||||||||||| ||||||||| Sbjct: 614 tcgtcgccgccgcgttcctgctcg 637
>gb|AE003511.4| Drosophila melanogaster chromosome X, section 63 of 74 of the complete sequence Length = 297969 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 attttgggcatgtgcattgg 289 |||||||||||||||||||| Sbjct: 246844 attttgggcatgtgcattgg 246825
>gb|AC161481.4| Mus musculus chromosome 18, clone RP23-336C20, complete sequence Length = 210643 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 tggtgagaagaggaagctga 306 |||||||||||||||||||| Sbjct: 10125 tggtgagaagaggaagctga 10144
>gb|AF067971.1|AF067971 Macaca mulatta beta amyloid precursor protein (APP) gene, promoter region and partial cds Length = 6074 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 tcgccgccgcgctcctgctc 45 |||||||||||||||||||| Sbjct: 5827 tcgccgccgcgctcctgctc 5846
>gb|U52046.1|ATU52046 Arabidopsis thaliana immunophilin (FKBP15-1) mRNA, complete cds Length = 618 Score = 40.1 bits (20), Expect = 8.2 Identities = 65/80 (81%) Strand = Plus / Plus Query: 189 tttgattctagctatgaaaggggtgacccaattgaatttgaattgggcactggtcaagtg 248 |||||||| || | ||| || |||||||| ||||| ||||| | || ||||||||||| Sbjct: 208 tttgattcaagttttgagagaggtgaccctattgagtttgagcttggaactggtcaagtc 267 Query: 249 atcaaaggatgggatcaggg 268 ||| ||||||||| ||||| Sbjct: 268 atcccaggatgggaccaggg 287
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 24 cgtcgccgccgcgctcctgctcgtcgcc 51 |||||||||||||||||| |||| |||| Sbjct: 2882877 cgtcgccgccgcgctcctcctcgccgcc 2882904
>gb|BC068345.1| Danio rerio arrestin domain containing 2, mRNA (cDNA clone MGC:85652 IMAGE:6805919), complete cds Length = 2522 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 atcagggaattttgggcatg 281 |||||||||||||||||||| Sbjct: 1620 atcagggaattttgggcatg 1639
>ref|NM_199939.1| Danio rerio arrestin domain containing 2 (arrdc2), mRNA Length = 2687 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 atcagggaattttgggcatg 281 |||||||||||||||||||| Sbjct: 1776 atcagggaattttgggcatg 1795
>dbj|AB029934.1| Triticum aestivum Chi 1 mRNA for chitinase 1, complete cds Length = 979 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 cgccgccgcgctcctgctcg 46 |||||||||||||||||||| Sbjct: 106 cgccgccgcgctcctgctcg 125 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,762,830 Number of Sequences: 3902068 Number of extensions: 4762830 Number of successful extensions: 94288 Number of sequences better than 10.0: 128 Number of HSP's better than 10.0 without gapping: 127 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 92646 Number of HSP's gapped (non-prelim): 1635 length of query: 605 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 582 effective length of database: 17,143,297,704 effective search space: 9977399263728 effective search space used: 9977399263728 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)