ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags9i05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1O52E6_HUMAN (Q96RD3) Olfactory receptor 52E6 30 6.1
2O52E2_HUMAN (Q8NGJ4) Olfactory receptor 52E2 30 6.1
3STAB1_HUMAN (Q9NY15) Stabilin-1 precursor (FEEL-1 protein) (MS-1... 30 8.0

>O52E6_HUMAN (Q96RD3) Olfactory receptor 52E6|
          Length = 313

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 19/66 (28%), Positives = 33/66 (50%)
 Frame = +1

Query: 217 CGSHLSIRACVPSATIAIDIFALHCNFVNLPQHFNILINNCLNFVPLVLTEQLNKLYFVG 396
           CGSH+ +   +  +T A   F  HC   ++PQ+ +I + N    VP      LN + +  
Sbjct: 242 CGSHIGV--ILAFSTPAFFSFFTHCFGHDIPQYIHIFLANLYVVVP----PTLNPVIYGV 295

Query: 397 VSEHVR 414
            ++H+R
Sbjct: 296 RTKHIR 301



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>O52E2_HUMAN (Q8NGJ4) Olfactory receptor 52E2|
          Length = 325

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 17/49 (34%), Positives = 27/49 (55%)
 Frame = +1

Query: 217 CGSHLSIRACVPSATIAIDIFALHCNFVNLPQHFNILINNCLNFVPLVL 363
           CGSH+ +   +   T A+  F  HC   N+P++ +IL+ N    VP +L
Sbjct: 242 CGSHVCV--ILAFYTPALFSFMTHCFGRNVPRYIHILLANLYVVVPPML 288



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>STAB1_HUMAN (Q9NY15) Stabilin-1 precursor (FEEL-1 protein) (MS-1 antigen)|
          Length = 2570

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 13/48 (27%), Positives = 25/48 (52%)
 Frame = +1

Query: 229 LSIRACVPSATIAIDIFALHCNFVNLPQHFNILINNCLNFVPLVLTEQ 372
           L+   C P++ + +DIF   C +++ P   N+L   C ++    + EQ
Sbjct: 672 LNTSTCPPNS-VKLDIFPKECVYIHDPTGLNVLKKGCASYCNQTIMEQ 718


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,467,410
Number of Sequences: 219361
Number of extensions: 1585114
Number of successful extensions: 3044
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3044
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6029593548
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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