Clone Name | bags9i03 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | RLA3_MAIZE (O24413) 60S acidic ribosomal protein P3 (P1/P2-like)... | 102 | 7e-22 | 2 | RLA3_ORYSA (P56724) 60S acidic ribosomal protein P3 (P1/P2-like) | 93 | 7e-19 | 3 | OR1D5_HUMAN (P58170) Olfactory receptor 1D5 (Olfactory receptor ... | 29 | 9.4 | 4 | OR1D4_HUMAN (P47884) Olfactory receptor 1D4 (Olfactory receptor ... | 29 | 9.4 |
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>RLA3_MAIZE (O24413) 60S acidic ribosomal protein P3 (P1/P2-like) (P3A)| Length = 119 Score = 102 bits (255), Expect = 7e-22 Identities = 55/119 (46%), Positives = 68/119 (57%), Gaps = 1/119 (0%) Frame = +3 Query: 3 GVFTFVCRDSGAXWSAKQHKGELEASAATPYDLQRQLVSAACAEDKSGGVQSSFTMVSPN 182 GV+TFVCR++G W+AKQH GE+EASAATPY+LQR+LV+AA A D GVQSSF+MV+P+ Sbjct: 1 GVYTFVCRNNGGEWTAKQHSGEIEASAATPYELQRRLVAAASAADSRYGVQSSFSMVTPS 60 Query: 183 SAIFQV-VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDLGFSLFD 356 SA+FQV V DD+GFSLFD Sbjct: 61 SAVFQVIVGAVGGGAMMVSGGGGGGAAASGGAAAEAPKEEKKEEEKEESDDDMGFSLFD 119
>RLA3_ORYSA (P56724) 60S acidic ribosomal protein P3 (P1/P2-like)| Length = 118 Score = 92.8 bits (229), Expect = 7e-19 Identities = 42/67 (62%), Positives = 54/67 (80%) Frame = +3 Query: 3 GVFTFVCRDSGAXWSAKQHKGELEASAATPYDLQRQLVSAACAEDKSGGVQSSFTMVSPN 182 GVF+FVC+ G W+AKQH+G+LEASA++ YDLQR +V A + D SGGVQSSF++VSP Sbjct: 1 GVFSFVCKSKGGEWTAKQHEGDLEASASSTYDLQRNVVQTALSADSSGGVQSSFSLVSPT 60 Query: 183 SAIFQVV 203 SA+F VV Sbjct: 61 SAVFVVV 67
>OR1D5_HUMAN (P58170) Olfactory receptor 1D5 (Olfactory receptor 17-31)| (OR17-31) Length = 312 Score = 29.3 bits (64), Expect = 9.4 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = +2 Query: 458 VTFCSCEDLVMLFCSFDILLWL 523 VTFC ++ LFC ILLWL Sbjct: 166 VTFCGPREIHYLFCDMYILLWL 187
>OR1D4_HUMAN (P47884) Olfactory receptor 1D4 (Olfactory receptor 17-30)| (OR17-30) Length = 311 Score = 29.3 bits (64), Expect = 9.4 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = +2 Query: 458 VTFCSCEDLVMLFCSFDILLWL 523 VTFC ++ LFC ILLWL Sbjct: 166 VTFCGPREIHYLFCDMYILLWL 187 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,890,468 Number of Sequences: 219361 Number of extensions: 770948 Number of successful extensions: 1711 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1680 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1710 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5424720305 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)