Clone Name | bags9h22 |
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Clone Library Name | barley_pub |
>SCS7_YEAST (Q03529) Inositolphosphorylceramide-B C-26 hydroxylase (EC 1.-.-.-)| (IPC-B hydroxylase) Length = 384 Score = 129 bits (325), Expect = 5e-30 Identities = 65/141 (46%), Positives = 79/141 (56%), Gaps = 4/141 (2%) Frame = +3 Query: 48 GIFIWTLVEYVLHRYLFHIDTKSYWTNTA---HYLLHGCHHKHPMDGLRLVFPPTAAAIL 218 G+F+WTL+EY LHR+LFH D +N A H+LLHGCHH PMD RLV PPT IL Sbjct: 232 GVFVWTLIEYGLHRFLFHFDDWLPESNIAFATHFLLHGCHHYLPMDKYRLVMPPTLFVIL 291 Query: 219 CYPFWNXXXXXXXXXXXXXXXXXXXXXXXIYDCTHYYLHHAH-PSFDPAKYLKKYHLNHH 395 C PF+ YD H++LHH+ P F + LKKYHL HH Sbjct: 292 CAPFYKLVFALLPLYWAYAGFAGGLFGYVCYDECHFFLHHSKLPPF--MRKLKKYHLEHH 349 Query: 396 FRIQNKGFGITSTLWDHVFGT 458 ++ GFG+TS WD VFGT Sbjct: 350 YKNYQLGFGVTSWFWDEVFGT 370
>TBK1_XENLA (Q6DFJ6) Serine/threonine-protein kinase TBK1 (EC 2.7.11.1)| Length = 725 Score = 36.2 bits (82), Expect = 0.080 Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 12/114 (10%) Frame = -2 Query: 353 ERGVGVMQVVVCAIIDHVAQQATSKHARSGSCSSEELDKIPER-----------IAQDGC 207 +R V +QV++ I + Q K R S + E++ K ++ + +D C Sbjct: 542 DRNVEKLQVLLSLITEIYCQFKKDKAQRRLSYNEEQIHKFDKQKLCLHAAKAYSLFKDEC 601 Query: 206 -GSWWKYKSKPIHWVLVMASMQKIMSRVCPVTFSIYVEQVPMQHVFNQCPDKYS 48 G + ++SK + W+ M ++K + + F I E QH NQ +K S Sbjct: 602 VGKYEVFRSKTLEWMRKMIHVRKQLFSIKSKCFDIEEEASKCQHYINQYQEKMS 655
>YFI3_ECOLI (Q99342) Putative endonuclease precursor (EC 3.1.-.-) (ORFA)| Length = 153 Score = 30.8 bits (68), Expect = 3.4 Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 4/29 (13%) Frame = +2 Query: 380 PS*PSLQNS----KQGLWNNIDPVGPRIW 454 P P LQN K+GLW++ DPV P IW Sbjct: 121 PVLPVLQNEARQQKRGLWSDADPVPPWIW 149
>YFI3_ECO57 (Q7BSX4) Putative endonuclease precursor (EC 3.1.-.-)| Length = 153 Score = 30.8 bits (68), Expect = 3.4 Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 4/29 (13%) Frame = +2 Query: 380 PS*PSLQNS----KQGLWNNIDPVGPRIW 454 P P LQN K+GLW++ DPV P IW Sbjct: 121 PVLPVLQNEARQQKRGLWSDADPVPPWIW 149
>NU1C_MARPO (P06255) NAD(P)H-quinone oxidoreductase chain 1, chloroplast (EC| 1.6.5.-) (NAD(P)H dehydrogenase, chain 1) (NADH-plastoquinone oxidoreductase chain 1) Length = 368 Score = 30.0 bits (66), Expect = 5.7 Identities = 13/42 (30%), Positives = 21/42 (50%) Frame = +2 Query: 221 LSVLEFCQALHYYNYHSWRVWRWPVGLRDL*LHTLLPASRPP 346 LS ++ +A Y + SW +WR P+G + +L R P Sbjct: 190 LSTVDIVEAQSKYGFLSWNLWRQPIGFIVFFIASLAECERLP 231
>NU1C_SACHY (Q6L3D5) NAD(P)H-quinone oxidoreductase chain 1, chloroplast (EC| 1.6.5.-) (NAD(P)H dehydrogenase, chain 1) (NADH-plastoquinone oxidoreductase chain 1) Length = 362 Score = 30.0 bits (66), Expect = 5.7 Identities = 12/42 (28%), Positives = 20/42 (47%) Frame = +2 Query: 221 LSVLEFCQALHYYNYHSWRVWRWPVGLRDL*LHTLLPASRPP 346 LS ++ +A Y + W +WR P+G + +L R P Sbjct: 188 LSTVDIVEAQSKYGFFGWNLWRQPIGFLVFLISSLAECERLP 229
>NU1C_MESVI (Q9MUL1) NAD(P)H-quinone oxidoreductase chain 1, chloroplast (EC| 1.6.5.-) (NAD(P)H dehydrogenase, chain 1) (NADH-plastoquinone oxidoreductase chain 1) Length = 367 Score = 29.6 bits (65), Expect = 7.5 Identities = 14/53 (26%), Positives = 21/53 (39%) Frame = +2 Query: 188 CISTNCRSHLVLSVLEFCQALHYYNYHSWRVWRWPVGLRDL*LHTLLPASRPP 346 C+ + C LS ++ Q Y W +WR P+G + L R P Sbjct: 179 CVLSICLLSDSLSTIDIVQKQSTYGILGWNIWRQPIGFIAFIIAALAECERLP 231
>NU1C_ARATH (Q37165) NAD(P)H-quinone oxidoreductase chain 1, chloroplast (EC| 1.6.5.-) (NAD(P)H dehydrogenase, chain 1) (NADH-plastoquinone oxidoreductase chain 1) Length = 360 Score = 29.6 bits (65), Expect = 7.5 Identities = 12/42 (28%), Positives = 21/42 (50%) Frame = +2 Query: 221 LSVLEFCQALHYYNYHSWRVWRWPVGLRDL*LHTLLPASRPP 346 LS ++ +A Y + W +WR P+G + +L + R P Sbjct: 189 LSTVDIVEAQSKYGFWGWNLWRQPIGFIIFLISSLAESERLP 230
>INSM1_HUMAN (Q01101) Insulinoma-associated protein 1 (Zinc finger protein IA-1)| Length = 510 Score = 29.3 bits (64), Expect = 9.8 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = +3 Query: 324 YYLHHAHPSFDPAKYLKKYHLNHHFRIQNKG 416 Y HH F YL+K+ L HH +Q KG Sbjct: 367 YECHHCAKKFRRQAYLRKHLLAHHQALQAKG 397
>NU1C_TOBAC (P06254) NAD(P)H-quinone oxidoreductase chain 1, chloroplast (EC| 1.6.5.-) (NAD(P)H dehydrogenase, chain 1) (NADH-plastoquinone oxidoreductase chain 1) Length = 367 Score = 29.3 bits (64), Expect = 9.8 Identities = 12/42 (28%), Positives = 20/42 (47%) Frame = +2 Query: 221 LSVLEFCQALHYYNYHSWRVWRWPVGLRDL*LHTLLPASRPP 346 LS ++ +A Y + W +WR P+G + +L R P Sbjct: 193 LSTVDIVEAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLP 234
>INSM1_MOUSE (Q63ZV0) Insulinoma-associated protein 1 (Zinc finger protein IA-1)| Length = 521 Score = 29.3 bits (64), Expect = 9.8 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = +3 Query: 324 YYLHHAHPSFDPAKYLKKYHLNHHFRIQNKG 416 Y HH F YL+K+ L HH +Q KG Sbjct: 373 YECHHCAKKFRRQAYLRKHLLAHHQALQAKG 403
>GNA12_HUMAN (Q03113) Guanine nucleotide-binding protein alpha-12 subunit (G| alpha-12) Length = 380 Score = 29.3 bits (64), Expect = 9.8 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = -2 Query: 221 AQDGCGSWWKYKSKPIHWVLVMASMQKIMSRVCPVTFSIYV 99 A+D G W+Y H + +MA K V P TF +YV Sbjct: 110 ARDKLGIPWQYSENEKHGMFLMAFENKAGLPVEPATFQLYV 150
>NU1C_WHEAT (Q95H43) NAD(P)H-quinone oxidoreductase chain 1, chloroplast (EC| 1.6.5.-) (NAD(P)H dehydrogenase, chain 1) (NADH-plastoquinone oxidoreductase chain 1) Length = 362 Score = 29.3 bits (64), Expect = 9.8 Identities = 11/41 (26%), Positives = 19/41 (46%) Frame = +2 Query: 224 SVLEFCQALHYYNYHSWRVWRWPVGLRDL*LHTLLPASRPP 346 S ++ +A Y + W +WR P+G + +L R P Sbjct: 189 STVDIVEAQSKYGFFGWNIWRQPIGFLVFLISSLAECERLP 229 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,039,737 Number of Sequences: 219361 Number of extensions: 2014731 Number of successful extensions: 5894 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 5574 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5891 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5653129581 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)