ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags9h22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK069213.1| Oryza sativa (japonica cultivar-group) cDNA clon... 295 9e-77
2dbj|AK061110.1| Oryza sativa (japonica cultivar-group) cDNA clon... 295 9e-77
3gb|AC027133.3| Oryza sativa (japonica cultivar-group) chromosome... 115 2e-22
4dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
5gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 115 2e-22
6ref|NM_118205.1| Arabidopsis thaliana catalytic AT4G20870 mRNA, ... 74 6e-10
7gb|AY101538.1| Arabidopsis thaliana AT4g20870/T13K14_30 mRNA, co... 74 6e-10
8gb|AY058151.1| Arabidopsis thaliana AT4g20870/T13K14_30 mRNA, co... 74 6e-10
9gb|AY044315.1| Arabidopsis thaliana fatty acid hydroxylase-like ... 74 6e-10
10emb|BX829252.1|CNS0A3KD Arabidopsis thaliana Full-length cDNA Co... 74 6e-10
11gb|BT018076.1| Zea mays clone EL01N0551G08.c mRNA sequence 68 4e-08
12gb|AY106784.1| Zea mays PCO100577 mRNA sequence 68 4e-08
13ref|NM_129030.2| Arabidopsis thaliana FAH1 (FATTY ACID HYDROXYLA... 64 6e-07
14gb|BT000482.1| Arabidopsis thaliana fatty acid hydroxylase (FAH1... 64 6e-07
15gb|AY050326.1| Arabidopsis thaliana At2g34770/T29F13.2 mRNA, com... 64 6e-07
16gb|AF021804.1|AF021804 Arabidopsis thaliana fatty acid hydroxyla... 64 6e-07
17gb|DQ226621.1| Boechera divaricarpa isolate SLW-4-B09 mRNA sequence 62 2e-06
18emb|AL161553.2|ATCHRIV53 Arabidopsis thaliana DNA chromosome 4, ... 62 2e-06
19emb|AL080282.1|ATT13K14 Arabidopsis thaliana DNA chromosome 4, B... 62 2e-06
20emb|BX827033.1|CNS0A42J Arabidopsis thaliana Full-length cDNA Co... 58 4e-05
21emb|BX828691.1|CNS0A3KV Arabidopsis thaliana Full-length cDNA Co... 58 4e-05
22emb|AL831803.4|CNS08CAG Oryza sativa chromosome 12, . BAC OSJNBb... 58 4e-05
23gb|AC147501.9| Medicago truncatula clone mth2-12n2, complete seq... 56 1e-04
24gb|AC149429.1| Populus trichocarpa clone Pop1-109D09, complete s... 54 6e-04
25ref|NM_184996.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.035
26gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 48 0.035
27gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 geno... 48 0.035
28dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.035
29dbj|AK103085.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.035
30dbj|AK059874.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.035
31emb|AL049646.19|HSDJ568F9 Human DNA sequence from clone RP4-568F... 46 0.14
32ref|XM_419627.1| PREDICTED: Gallus gallus similar to hypothetica... 44 0.54
33gb|CP000302.1| Shewanella denitrificans OS217, complete genome 44 0.54
34gb|AC171141.2| Helobdella robusta clone CH306-1B3, complete sequ... 44 0.54
35ref|XM_363498.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 2.1
36gb|AY341245.1| Homo sapiens chromosome condensation 1-like (CHC1... 42 2.1
37emb|AL157813.11| Human DNA sequence from clone RP11-165D7 on chr... 42 2.1
38gb|AC021010.8| Homo sapiens, clone RP11-69D2, complete sequence 42 2.1
39emb|AJ877899.1| Human immunodeficiency virus type 1 subtype A pr... 42 2.1
40gb|AC124749.5| Mus musculus BAC clone RP23-262G23 from chromosom... 40 8.5
41gb|AC126046.3| Mus musculus BAC clone RP23-176P24 from chromosom... 40 8.5
42gb|AC126439.3| Mus musculus BAC clone RP24-290I17 from chromosom... 40 8.5
43gb|AC125464.4| Mus musculus BAC clone RP23-113C9 from 14, comple... 40 8.5
44emb|AL122014.27|HSDJ874H1 Human DNA sequence from clone RP5-874H... 40 8.5
45gb|AC068295.15| Homo sapiens 3 BAC RP11-44H4 (Roswell Park Cance... 40 8.5
46ref|NM_001027786.1| Caenorhabditis elegans Y82E9BL.18 (Y82E9BL.1... 40 8.5
47dbj|BS000088.1| Pan troglodytes chromosome 22 clone:RP43-078B15,... 40 8.5
48gb|AC008000.7|AC008000 Homo sapiens 3q25-26 BAC CITB-371O18 (Cal... 40 8.5
49gb|AC131727.4| Mus musculus BAC clone RP23-120E19 from 14, compl... 40 8.5
50dbj|AP001688.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 8.5
51dbj|AP002793.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 8.5
52gb|AC087081.2| Caenorhabditis elegans cosmid Y82E9BL, complete s... 40 8.5
53gb|AC147645.3| Gallus gallus BAC clone CH261-121C23 from chromos... 40 8.5
54dbj|AP004983.1| Lotus japonicus genomic DNA, chromosome 6, clone... 40 8.5
55gb|AC018839.5| Homo sapiens chromosome 3 clone RP11-593J10 map 3... 40 8.5
56gb|AC090841.2| Homo sapiens chromosome 3 clone RP11-1082A18 map ... 40 8.5
57dbj|AP000965.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 40 8.5
58emb|AL772336.5| Mouse DNA sequence from clone RP23-180H12 on chr... 40 8.5 
>dbj|AK069213.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010G06, full
           insert sequence
          Length = 1392

 Score =  295 bits (149), Expect = 9e-77
 Identities = 341/405 (84%)
 Strand = Plus / Plus

                                                                       
Query: 82  tgcatcggtacctgttccacatagatactaaaagttactggacaaacacggctcattatc 141
           ||||||| | ||||||||||||| ||||||||||||||||||||||||| || ||||| |
Sbjct: 467 tgcatcgattcctgttccacataaatactaaaagttactggacaaacacagcacattacc 526

                                                                       
Query: 142 ttctgcatggatgccatcacaagcacccaatggatgggcttcgacttgtatttccaccaa 201
           |||| ||||||   |||||||||||||| |  || || ||||||||||| ||||||||| 
Sbjct: 527 ttcttcatggaattcatcacaagcacccgactgacggccttcgacttgtctttccaccag 586

                                                                       
Query: 202 ctgccgcagccatcttgtgctatccgttctggaattttgtcaagctcttcactactacaa 261
           | || ||||| |||||||||| ||||||||||||| |  ||| |||  | |||||| | |
Sbjct: 587 cagctgcagctatcttgtgctttccgttctggaatctaatcaggctaattactactccga 646

                                                                       
Query: 262 ctaccactcctggcgtgtttggaggtggcctgttgggctacgtgatctatgattgcacac 321
           |||| ||||  |||||||||||||| ||||||||||| || ||||| ||||| |||||||
Sbjct: 647 ctacaactcacggcgtgtttggaggcggcctgttgggttatgtgatgtatgactgcacac 706

                                                                       
Query: 322 actactacctgcatcacgcccacccctcgttcgatccagcaaaatatctcaagaaatacc 381
           ||||||| |||||||| |  || || || |  ||||||| |||| | |||||||||||||
Sbjct: 707 actactatctgcatcatgggcagccgtcatctgatccaggaaaacacctcaagaaatacc 766

                                                                       
Query: 382 atcttaaccatcacttcagaattcaaaacaagggctttggaataacatcgaccctgtggg 441
           |||| ||||||||||||||||| ||||||||||| || |||||||||||||| |||||||
Sbjct: 767 atctgaaccatcacttcagaatccaaaacaaggggttcggaataacatcgacgctgtggg 826

                                                        
Query: 442 accacgtatttggaacgctgccttcaacgaaaaccgtcgacaaga 486
           | || || ||||| ||  |||| || ||||||||| |||||||||
Sbjct: 827 atcatgtgtttggtacattgccctcgacgaaaaccatcgacaaga 871
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>dbj|AK061110.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-D02, full
           insert sequence
          Length = 1438

 Score =  295 bits (149), Expect = 9e-77
 Identities = 341/405 (84%)
 Strand = Plus / Plus

                                                                       
Query: 82  tgcatcggtacctgttccacatagatactaaaagttactggacaaacacggctcattatc 141
           ||||||| | ||||||||||||| ||||||||||||||||||||||||| || ||||| |
Sbjct: 489 tgcatcgattcctgttccacataaatactaaaagttactggacaaacacagcacattacc 548

                                                                       
Query: 142 ttctgcatggatgccatcacaagcacccaatggatgggcttcgacttgtatttccaccaa 201
           |||| ||||||   |||||||||||||| |  || || ||||||||||| ||||||||| 
Sbjct: 549 ttcttcatggaattcatcacaagcacccgactgacggccttcgacttgtctttccaccag 608

                                                                       
Query: 202 ctgccgcagccatcttgtgctatccgttctggaattttgtcaagctcttcactactacaa 261
           | || ||||| |||||||||| ||||||||||||| |  ||| |||  | |||||| | |
Sbjct: 609 cagctgcagctatcttgtgctttccgttctggaatctaatcaggctaattactactccga 668

                                                                       
Query: 262 ctaccactcctggcgtgtttggaggtggcctgttgggctacgtgatctatgattgcacac 321
           |||| ||||  |||||||||||||| ||||||||||| || ||||| ||||| |||||||
Sbjct: 669 ctacaactcacggcgtgtttggaggcggcctgttgggttatgtgatgtatgactgcacac 728

                                                                       
Query: 322 actactacctgcatcacgcccacccctcgttcgatccagcaaaatatctcaagaaatacc 381
           ||||||| |||||||| |  || || || |  ||||||| |||| | |||||||||||||
Sbjct: 729 actactatctgcatcatgggcagccgtcatctgatccaggaaaacacctcaagaaatacc 788

                                                                       
Query: 382 atcttaaccatcacttcagaattcaaaacaagggctttggaataacatcgaccctgtggg 441
           |||| ||||||||||||||||| ||||||||||| || |||||||||||||| |||||||
Sbjct: 789 atctgaaccatcacttcagaatccaaaacaaggggttcggaataacatcgacgctgtggg 848

                                                        
Query: 442 accacgtatttggaacgctgccttcaacgaaaaccgtcgacaaga 486
           | || || ||||| ||  |||| || ||||||||| |||||||||
Sbjct: 849 atcatgtgtttggtacattgccctcgacgaaaaccatcgacaaga 893
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>gb|AC027133.3| Oryza sativa (japonica cultivar-group) chromosome 12 clone
             OSJNBb0003F09, complete sequence
          Length = 159600

 Score =  115 bits (58), Expect = 2e-22
 Identities = 100/114 (87%)
 Strand = Plus / Plus

                                                                         
Query: 373   agaaataccatcttaaccatcacttcagaattcaaaacaagggctttggaataacatcga 432
             ||||||||||||| ||||||||||||||||| ||||||||||| || |||||||||||||
Sbjct: 63787 agaaataccatctgaaccatcacttcagaatccaaaacaaggggttcggaataacatcga 63846

                                                                   
Query: 433   ccctgtgggaccacgtatttggaacgctgccttcaacgaaaaccgtcgacaaga 486
             | |||||||| || || ||||| ||  |||| || ||||||||| |||||||||
Sbjct: 63847 cgctgtgggatcatgtgtttggtacattgccctcgacgaaaaccatcgacaaga 63900



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                         
Query: 252   actactacaactaccactcctggcgtgtttggaggtggcctgttgggctacgtgatctat 311
             |||||| | ||||| ||||  |||||||||||||| ||||||||||| || ||||| |||
Sbjct: 63573 actactccgactacaactcacggcgtgtttggaggcggcctgttgggttatgtgatgtat 63632

                                       
Query: 312   gattgcacacactactacctgcatca 337
             || |||||||||||||| ||||||||
Sbjct: 63633 gactgcacacactactatctgcatca 63658



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 89/107 (83%)
 Strand = Plus / Plus

                                                                         
Query: 121   ggacaaacacggctcattatcttctgcatggatgccatcacaagcacccaatggatgggc 180
             |||||||||| || ||||| ||||| ||||||   |||||||||||||| |  || || |
Sbjct: 63335 ggacaaacacagcacattaccttcttcatggaattcatcacaagcacccgactgacggcc 63394

                                                            
Query: 181   ttcgacttgtatttccaccaactgccgcagccatcttgtgctatccg 227
             |||||||||| ||||||||| | || ||||| |||||||||| ||||
Sbjct: 63395 ttcgacttgtctttccaccagcagctgcagctatcttgtgctttccg 63441



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                      
Query: 82    tgcatcggtacctgttccacatagatactaaaagttactgg 122
             ||||||| | ||||||||||||| |||||||||||||||||
Sbjct: 63205 tgcatcgattcctgttccacataaatactaaaagttactgg 63245
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  115 bits (58), Expect = 2e-22
 Identities = 100/114 (87%)
 Strand = Plus / Plus

                                                                            
Query: 373      agaaataccatcttaaccatcacttcagaattcaaaacaagggctttggaataacatcga 432
                ||||||||||||| ||||||||||||||||| ||||||||||| || |||||||||||||
Sbjct: 26938820 agaaataccatctgaaccatcacttcagaatccaaaacaaggggttcggaataacatcga 26938879

                                                                      
Query: 433      ccctgtgggaccacgtatttggaacgctgccttcaacgaaaaccgtcgacaaga 486
                | |||||||| || || ||||| ||  |||| || ||||||||| |||||||||
Sbjct: 26938880 cgctgtgggatcatgtgtttggtacattgccctcgacgaaaaccatcgacaaga 26938933



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                            
Query: 252      actactacaactaccactcctggcgtgtttggaggtggcctgttgggctacgtgatctat 311
                |||||| | ||||| ||||  |||||||||||||| ||||||||||| || ||||| |||
Sbjct: 26938606 actactccgactacaactcacggcgtgtttggaggcggcctgttgggttatgtgatgtat 26938665

                                          
Query: 312      gattgcacacactactacctgcatca 337
                || |||||||||||||| ||||||||
Sbjct: 26938666 gactgcacacactactatctgcatca 26938691



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 89/107 (83%)
 Strand = Plus / Plus

                                                                            
Query: 121      ggacaaacacggctcattatcttctgcatggatgccatcacaagcacccaatggatgggc 180
                |||||||||| || ||||| ||||| ||||||   |||||||||||||| |  || || |
Sbjct: 26938368 ggacaaacacagcacattaccttcttcatggaattcatcacaagcacccgactgacggcc 26938427

                                                               
Query: 181      ttcgacttgtatttccaccaactgccgcagccatcttgtgctatccg 227
                |||||||||| ||||||||| | || ||||| |||||||||| ||||
Sbjct: 26938428 ttcgacttgtctttccaccagcagctgcagctatcttgtgctttccg 26938474



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                         
Query: 82       tgcatcggtacctgttccacatagatactaaaagttactgg 122
                ||||||| | ||||||||||||| |||||||||||||||||
Sbjct: 26938238 tgcatcgattcctgttccacataaatactaaaagttactgg 26938278
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  115 bits (58), Expect = 2e-22
 Identities = 100/114 (87%)
 Strand = Plus / Plus

                                                                            
Query: 373      agaaataccatcttaaccatcacttcagaattcaaaacaagggctttggaataacatcga 432
                ||||||||||||| ||||||||||||||||| ||||||||||| || |||||||||||||
Sbjct: 26866990 agaaataccatctgaaccatcacttcagaatccaaaacaaggggttcggaataacatcga 26867049

                                                                      
Query: 433      ccctgtgggaccacgtatttggaacgctgccttcaacgaaaaccgtcgacaaga 486
                | |||||||| || || ||||| ||  |||| || ||||||||| |||||||||
Sbjct: 26867050 cgctgtgggatcatgtgtttggtacattgccctcgacgaaaaccatcgacaaga 26867103



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                            
Query: 252      actactacaactaccactcctggcgtgtttggaggtggcctgttgggctacgtgatctat 311
                |||||| | ||||| ||||  |||||||||||||| ||||||||||| || ||||| |||
Sbjct: 26866776 actactccgactacaactcacggcgtgtttggaggcggcctgttgggttatgtgatgtat 26866835

                                          
Query: 312      gattgcacacactactacctgcatca 337
                || |||||||||||||| ||||||||
Sbjct: 26866836 gactgcacacactactatctgcatca 26866861



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 89/107 (83%)
 Strand = Plus / Plus

                                                                            
Query: 121      ggacaaacacggctcattatcttctgcatggatgccatcacaagcacccaatggatgggc 180
                |||||||||| || ||||| ||||| ||||||   |||||||||||||| |  || || |
Sbjct: 26866538 ggacaaacacagcacattaccttcttcatggaattcatcacaagcacccgactgacggcc 26866597

                                                               
Query: 181      ttcgacttgtatttccaccaactgccgcagccatcttgtgctatccg 227
                |||||||||| ||||||||| | || ||||| |||||||||| ||||
Sbjct: 26866598 ttcgacttgtctttccaccagcagctgcagctatcttgtgctttccg 26866644



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                         
Query: 82       tgcatcggtacctgttccacatagatactaaaagttactgg 122
                ||||||| | ||||||||||||| |||||||||||||||||
Sbjct: 26866408 tgcatcgattcctgttccacataaatactaaaagttactgg 26866448
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>ref|NM_118205.1| Arabidopsis thaliana catalytic AT4G20870 mRNA, complete cds
          Length = 748

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                    
Query: 114 agttactggacaaacacggctcattatcttctgcatggatgccatcacaagcaccca 170
           ||||||||| ||||||| || || |||||||| ||||||||||||||||||||||||
Sbjct: 334 agttactgggcaaacactgcacactatcttcttcatggatgccatcacaagcaccca 390
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>gb|AY101538.1| Arabidopsis thaliana AT4g20870/T13K14_30 mRNA, complete cds
          Length = 714

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                    
Query: 114 agttactggacaaacacggctcattatcttctgcatggatgccatcacaagcaccca 170
           ||||||||| ||||||| || || |||||||| ||||||||||||||||||||||||
Sbjct: 334 agttactgggcaaacactgcacactatcttcttcatggatgccatcacaagcaccca 390
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>gb|AY058151.1| Arabidopsis thaliana AT4g20870/T13K14_30 mRNA, complete cds
          Length = 1049

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                    
Query: 114 agttactggacaaacacggctcattatcttctgcatggatgccatcacaagcaccca 170
           ||||||||| ||||||| || || |||||||| ||||||||||||||||||||||||
Sbjct: 501 agttactgggcaaacactgcacactatcttcttcatggatgccatcacaagcaccca 557
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>gb|AY044315.1| Arabidopsis thaliana fatty acid hydroxylase-like protein
           (T13K14.30) mRNA, complete cds
          Length = 751

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                    
Query: 114 agttactggacaaacacggctcattatcttctgcatggatgccatcacaagcaccca 170
           ||||||||| ||||||| || || |||||||| ||||||||||||||||||||||||
Sbjct: 334 agttactgggcaaacactgcacactatcttcttcatggatgccatcacaagcaccca 390
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>emb|BX829252.1|CNS0A3KD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL84ZE01 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 937

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                    
Query: 114 agttactggacaaacacggctcattatcttctgcatggatgccatcacaagcaccca 170
           ||||||||| ||||||| || || |||||||| ||||||||||||||||||||||||
Sbjct: 387 agttactgggcaaacactgcacactatcttcttcatggatgccatcacaagcaccca 443
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>gb|BT018076.1| Zea mays clone EL01N0551G08.c mRNA sequence
          Length = 1084

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 115/142 (80%)
 Strand = Plus / Plus

                                                                       
Query: 277 tgtttggaggtggcctgttgggctacgtgatctatgattgcacacactactacctgcatc 336
           |||| ||||| || |||||||| || ||||| ||||||||||| |||||||||||||| |
Sbjct: 599 tgttcggaggcggtctgttgggatatgtgatgtatgattgcactcactactacctgcacc 658

                                                                       
Query: 337 acgcccacccctcgttcgatccagcaaaatatctcaagaaataccatcttaaccatcact 396
           | |  || || ||    || ||||||||| |||||||||  || || || ||||||||||
Sbjct: 659 atgggcaaccatccaaagacccagcaaaacatctcaagaggtatcacctcaaccatcact 718

                                 
Query: 397 tcagaattcaaaacaagggctt 418
           ||||||| ||  ||||||||||
Sbjct: 719 tcagaatccaggacaagggctt 740
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>gb|AY106784.1| Zea mays PCO100577 mRNA sequence
          Length = 1072

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 115/142 (80%)
 Strand = Plus / Plus

                                                                       
Query: 277 tgtttggaggtggcctgttgggctacgtgatctatgattgcacacactactacctgcatc 336
           |||| ||||| || |||||||| || ||||| ||||||||||| |||||||||||||| |
Sbjct: 656 tgttcggaggcggtctgttgggatatgtgatgtatgattgcactcactactacctgcacc 715

                                                                       
Query: 337 acgcccacccctcgttcgatccagcaaaatatctcaagaaataccatcttaaccatcact 396
           | |  || || ||    || ||||||||| |||||||||  || || || ||||||||||
Sbjct: 716 atgggcaaccatccaaagacccagcaaaacatctcaagaggtatcacctcaaccatcact 775

                                 
Query: 397 tcagaattcaaaacaagggctt 418
           ||||||| ||  ||||||||||
Sbjct: 776 tcagaatccaggacaagggctt 797
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>ref|NM_129030.2| Arabidopsis thaliana FAH1 (FATTY ACID HYDROXYLASE 1); catalytic
           AT2G34770 (FAH1) mRNA, complete cds
          Length = 1142

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 104/128 (81%)
 Strand = Plus / Plus

                                                                       
Query: 48  ggaatatttatctggacactggttgaatacgtgctgcatcggtacctgttccacatagat 107
           |||||||| ||||||||| |  |||||||||| || || |||| | | ||||||||| | 
Sbjct: 507 ggaatattcatctggacattttttgaatacgttcttcaccggttcgttttccacataaaa 566

                                                                       
Query: 108 actaaaagttactggacaaacacggctcattatcttctgcatggatgccatcacaagcac 167
           || || |||||||||  |||||| || || |||||| | || ||||||||||| ||||||
Sbjct: 567 acgaagagttactggggaaacactgcacactatcttattcacggatgccatcataagcac 626

                   
Query: 168 ccaatgga 175
           || |||||
Sbjct: 627 ccgatgga 634



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                       
Query: 367 atctcaagaaataccatcttaaccatcacttcagaattcaaaacaagggctttggaataa 426
           |||||||||| |||||| | || ||||||||||| |||||  |||| || ||||| ||||
Sbjct: 826 atctcaagaagtaccatttgaatcatcacttcaggattcaggacaaaggatttggtataa 885

            
Query: 427 c 427
           |
Sbjct: 886 c 886
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>gb|BT000482.1| Arabidopsis thaliana fatty acid hydroxylase (FAH1)
           (At2g34770/T29F13.2) mRNA, complete cds
          Length = 714

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 104/128 (81%)
 Strand = Plus / Plus

                                                                       
Query: 48  ggaatatttatctggacactggttgaatacgtgctgcatcggtacctgttccacatagat 107
           |||||||| ||||||||| |  |||||||||| || || |||| | | ||||||||| | 
Sbjct: 268 ggaatattcatctggacattttttgaatacgttcttcaccggttcgttttccacataaaa 327

                                                                       
Query: 108 actaaaagttactggacaaacacggctcattatcttctgcatggatgccatcacaagcac 167
           || || |||||||||  |||||| || || |||||| | || ||||||||||| ||||||
Sbjct: 328 acgaagagttactggggaaacactgcacactatcttattcacggatgccatcataagcac 387

                   
Query: 168 ccaatgga 175
           || |||||
Sbjct: 388 ccgatgga 395



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                       
Query: 367 atctcaagaaataccatcttaaccatcacttcagaattcaaaacaagggctttggaataa 426
           |||||||||| |||||| | || ||||||||||| |||||  |||| || ||||| ||||
Sbjct: 587 atctcaagaagtaccatttgaatcatcacttcaggattcaggacaaaggatttggtataa 646

            
Query: 427 c 427
           |
Sbjct: 647 c 647
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>gb|AY050326.1| Arabidopsis thaliana At2g34770/T29F13.2 mRNA, complete cds
          Length = 827

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 104/128 (81%)
 Strand = Plus / Plus

                                                                       
Query: 48  ggaatatttatctggacactggttgaatacgtgctgcatcggtacctgttccacatagat 107
           |||||||| ||||||||| |  |||||||||| || || |||| | | ||||||||| | 
Sbjct: 308 ggaatattcatctggacattttttgaatacgttcttcaccggttcgttttccacataaaa 367

                                                                       
Query: 108 actaaaagttactggacaaacacggctcattatcttctgcatggatgccatcacaagcac 167
           || || |||||||||  |||||| || || |||||| | || ||||||||||| ||||||
Sbjct: 368 acgaagagttactggggaaacactgcacactatcttattcacggatgccatcataagcac 427

                   
Query: 168 ccaatgga 175
           || |||||
Sbjct: 428 ccgatgga 435



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                       
Query: 367 atctcaagaaataccatcttaaccatcacttcagaattcaaaacaagggctttggaataa 426
           |||||||||| |||||| | || ||||||||||| |||||  |||| || ||||| ||||
Sbjct: 627 atctcaagaagtaccatttgaatcatcacttcaggattcaggacaaaggatttggtataa 686

            
Query: 427 c 427
           |
Sbjct: 687 c 687
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>gb|AF021804.1|AF021804 Arabidopsis thaliana fatty acid hydroxylase Fah1p (FAH1) mRNA,
           complete cds
          Length = 714

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 104/128 (81%)
 Strand = Plus / Plus

                                                                       
Query: 48  ggaatatttatctggacactggttgaatacgtgctgcatcggtacctgttccacatagat 107
           |||||||| ||||||||| |  |||||||||| || || |||| | | ||||||||| | 
Sbjct: 268 ggaatattcatctggacattttttgaatacgttcttcaccggttcgttttccacataaaa 327

                                                                       
Query: 108 actaaaagttactggacaaacacggctcattatcttctgcatggatgccatcacaagcac 167
           || || |||||||||  |||||| || || |||||| | || ||||||||||| ||||||
Sbjct: 328 acgaagagttactggggaaacactgcacactatcttattcacggatgccatcataagcac 387

                   
Query: 168 ccaatgga 175
           || |||||
Sbjct: 388 ccgatgga 395



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                       
Query: 367 atctcaagaaataccatcttaaccatcacttcagaattcaaaacaagggctttggaataa 426
           |||||||||| |||||| | || ||||||||||| |||||  |||| || ||||| ||||
Sbjct: 587 atctcaagaagtaccatttgaatcatcacttcaggattcaggacaaaggatttggtataa 646

            
Query: 427 c 427
           |
Sbjct: 647 c 647
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>gb|DQ226621.1| Boechera divaricarpa isolate SLW-4-B09 mRNA sequence
          Length = 385

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                          
Query: 124 caaacacggctcattatcttctgcatggatgccatcacaagcaccca 170
           ||||||| || || |||||||| ||||||||||||||||||||||||
Sbjct: 344 caaacaccgcacactatcttcttcatggatgccatcacaagcaccca 298
to top
>emb|AL161553.2|ATCHRIV53 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 53
          Length = 197568

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                             
Query: 124    caaacacggctcattatcttctgcatggatgccatcacaagcaccca 170
              ||||||| || || |||||||| ||||||||||||||||||||||||
Sbjct: 179326 caaacactgcacactatcttcttcatggatgccatcacaagcaccca 179280
to top
>emb|AL080282.1|ATT13K14 Arabidopsis thaliana DNA chromosome 4, BAC clone T13K14 (ESSA project)
          Length = 91570

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                            
Query: 124   caaacacggctcattatcttctgcatggatgccatcacaagcaccca 170
             ||||||| || || |||||||| ||||||||||||||||||||||||
Sbjct: 14280 caaacactgcacactatcttcttcatggatgccatcacaagcaccca 14234
to top
>emb|BX827033.1|CNS0A42J Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB89ZE07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 914

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 138 tatcttctgcatggatgccatcacaagcaccca 170
           |||||||| ||||||||||||||||||||||||
Sbjct: 388 tatcttcttcatggatgccatcacaagcaccca 420
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>emb|BX828691.1|CNS0A3KV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL2ZG08 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 956

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 138 tatcttctgcatggatgccatcacaagcaccca 170
           |||||||| ||||||||||||||||||||||||
Sbjct: 449 tatcttcttcatggatgccatcacaagcaccca 481
to top
>emb|AL831803.4|CNS08CAG Oryza sativa chromosome 12, . BAC OSJNBb0016P08 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 142370

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                       
Query: 82     tgcatcggtacctgttccacatagatactaaaagttactgg 122
              ||||||| | ||||||||||||| |||||||||||||||||
Sbjct: 142205 tgcatcgattcctgttccacataaatactaaaagttactgg 142245
to top
>gb|AC147501.9| Medicago truncatula clone mth2-12n2, complete sequence
          Length = 140523

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                         
Query: 135   cattatcttctgcatggatgccatcacaagcacccaatggatgg 178
             ||||||||||| ||||||||||| ||||| ||||| ||||||||
Sbjct: 84738 cattatcttctacatggatgccaccacaaacaccccatggatgg 84695
to top
>gb|AC149429.1| Populus trichocarpa clone Pop1-109D09, complete sequence
          Length = 94633

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                         
Query: 126   aacacggctcattatcttctgcatggatgccatcacaagcacccaatggatgggcttcga 185
             ||||| || ||||||||||| ||||| || ||||| |||||||| |||||||| || || 
Sbjct: 60547 aacacagcacattatcttcttcatggttgtcatcataagcaccctatggatggtctccgc 60606

                        
Query: 186   cttgtatttcc 196
             ||||| |||||
Sbjct: 60607 cttgtttttcc 60617



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 295   tgggctacgtgatctatgattgcacacactactacctgca 334
             ||||||| ||||| ||||| ||||| ||||||||||||||
Sbjct: 61364 tgggctatgtgatgtatgactgcactcactactacctgca 61403
to top
>ref|NM_184996.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 714

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 279 tttggaggtggcctgttgggctacgtgatctatgattgcacacactactacctgca 334
           ||||| |||||||||||||| || ||||| ||||| ||||| ||||| ||| ||||
Sbjct: 499 tttggtggtggcctgttgggatatgtgatgtatgactgcactcactattacttgca 554



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 387 aaccatcacttcagaattcaaaacaagggctttgg 421
           ||||| ||||||||||| |||||||| ||||||||
Sbjct: 607 aaccaccacttcagaatccaaaacaaaggctttgg 641



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                               
Query: 124 caaacacggctcattatcttctgcatggatgccatcacaagcacccaatgga 175
           ||||||| || ||||| ||||| ||||||||||| || ||||| || |||||
Sbjct: 344 caaacacagcacattaccttcttcatggatgccaccataagcatcctatgga 395
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                        
Query: 279      tttggaggtggcctgttgggctacgtgatctatgattgcacacactactacctgca 334
                ||||| |||||||||||||| || ||||| ||||| ||||| ||||| ||| ||||
Sbjct: 32073930 tttggtggtggcctgttgggatatgtgatgtatgactgcactcactattacttgca 32073985



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 387      aaccatcacttcagaattcaaaacaagggctttgg 421
                ||||| ||||||||||| |||||||| ||||||||
Sbjct: 32074137 aaccaccacttcagaatccaaaacaaaggctttgg 32074171



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                    
Query: 124      caaacacggctcattatcttctgcatggatgccatcacaagcacccaatgga 175
                ||||||| || ||||| ||||| ||||||||||| || ||||| || |||||
Sbjct: 32073647 caaacacagcacattaccttcttcatggatgccaccataagcatcctatgga 32073698
to top
>gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 genomic sequence, complete
             sequence
          Length = 178158

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                     
Query: 279   tttggaggtggcctgttgggctacgtgatctatgattgcacacactactacctgca 334
             ||||| |||||||||||||| || ||||| ||||| ||||| ||||| ||| ||||
Sbjct: 75055 tttggtggtggcctgttgggatatgtgatgtatgactgcactcactattacttgca 75110



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 387   aaccatcacttcagaattcaaaacaagggctttgg 421
             ||||| ||||||||||| |||||||| ||||||||
Sbjct: 75262 aaccaccacttcagaatccaaaacaaaggctttgg 75296



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                 
Query: 124   caaacacggctcattatcttctgcatggatgccatcacaagcacccaatgga 175
             ||||||| || ||||| ||||| ||||||||||| || ||||| || |||||
Sbjct: 74772 caaacacagcacattaccttcttcatggatgccaccataagcatcctatgga 74823
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                        
Query: 279      tttggaggtggcctgttgggctacgtgatctatgattgcacacactactacctgca 334
                ||||| |||||||||||||| || ||||| ||||| ||||| ||||| ||| ||||
Sbjct: 32164442 tttggtggtggcctgttgggatatgtgatgtatgactgcactcactattacttgca 32164497



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 387      aaccatcacttcagaattcaaaacaagggctttgg 421
                ||||| ||||||||||| |||||||| ||||||||
Sbjct: 32164649 aaccaccacttcagaatccaaaacaaaggctttgg 32164683



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                    
Query: 124      caaacacggctcattatcttctgcatggatgccatcacaagcacccaatgga 175
                ||||||| || ||||| ||||| ||||||||||| || ||||| || |||||
Sbjct: 32164159 caaacacagcacattaccttcttcatggatgccaccataagcatcctatgga 32164210
to top
>dbj|AK103085.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118H09, full
           insert sequence
          Length = 1229

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 279 tttggaggtggcctgttgggctacgtgatctatgattgcacacactactacctgca 334
           ||||| |||||||||||||| || ||||| ||||| ||||| ||||| ||| ||||
Sbjct: 719 tttggtggtggcctgttgggatatgtgatgtatgactgcactcactattacttgca 774



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 387 aaccatcacttcagaattcaaaacaagggctttgg 421
           ||||| ||||||||||| |||||||| ||||||||
Sbjct: 827 aaccaccacttcagaatccaaaacaaaggctttgg 861



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                               
Query: 124 caaacacggctcattatcttctgcatggatgccatcacaagcacccaatgga 175
           ||||||| || ||||| ||||| ||||||||||| || ||||| || |||||
Sbjct: 564 caaacacagcacattaccttcttcatggatgccaccataagcatcctatgga 615
to top
>dbj|AK059874.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-F06, full
           insert sequence
          Length = 1045

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 279 tttggaggtggcctgttgggctacgtgatctatgattgcacacactactacctgca 334
           ||||| |||||||||||||| || ||||| ||||| ||||| ||||| ||| ||||
Sbjct: 618 tttggtggtggcctgttgggatatgtgatgtatgactgcactcactattacttgca 673



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 387 aaccatcacttcagaattcaaaacaagggctttgg 421
           ||||| ||||||||||| |||||||| ||||||||
Sbjct: 726 aaccaccacttcagaatccaaaacaaaggctttgg 760



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                               
Query: 124 caaacacggctcattatcttctgcatggatgccatcacaagcacccaatgga 175
           ||||||| || ||||| ||||| ||||||||||| || ||||| || |||||
Sbjct: 463 caaacacagcacattaccttcttcatggatgccaccataagcatcctatgga 514
to top
>emb|AL049646.19|HSDJ568F9 Human DNA sequence from clone RP4-568F9 on chromosome 20 Contains the
             ZNF133 gene for zinc finger protein 133, three novel
             genes, the 3' end of the C20orf12 gene for chromosome 20
             open reading frame 12 and two CpG islands, complete
             sequence
          Length = 155432

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 294   ttgggctacgtgatctatgattg 316
             |||||||||||||||||||||||
Sbjct: 67773 ttgggctacgtgatctatgattg 67795
to top
>ref|XM_419627.1| PREDICTED: Gallus gallus similar to hypothetical protein
           (LOC421589), mRNA
          Length = 2454

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 252 actactacaactaccactcctg 273
           ||||||||||||||||||||||
Sbjct: 491 actactacaactaccactcctg 512
to top
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome
          Length = 4545906

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 421     gaataacatcgaccctgtggga 442
               ||||||||||||||||||||||
Sbjct: 1271607 gaataacatcgaccctgtggga 1271586
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>gb|AC171141.2| Helobdella robusta clone CH306-1B3, complete sequence
          Length = 94001

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 252   actactacaactaccactcctg 273
             ||||||||||||||||||||||
Sbjct: 14219 actactacaactaccactcctg 14240
to top
>ref|XM_363498.1| Magnaporthe grisea 70-15 hypothetical protein (MG01424.4) partial
           mRNA
          Length = 1608

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 410 caagggctttggaataacatc 430
           |||||||||||||||||||||
Sbjct: 549 caagggctttggaataacatc 569
to top
>gb|AY341245.1| Homo sapiens chromosome condensation 1-like (CHC1L) gene, complete
            cds
          Length = 37676

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 405  caaaacaagggctttggaata 425
            |||||||||||||||||||||
Sbjct: 982  caaaacaagggctttggaata 1002
to top
>emb|AL157813.11| Human DNA sequence from clone RP11-165D7 on chromosome 13 Contains the
             CHC1L gene for chromosome condensation 1-like, 3 novel
             genes and a CpG island, complete sequence
          Length = 114519

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 405   caaaacaagggctttggaata 425
             |||||||||||||||||||||
Sbjct: 36136 caaaacaagggctttggaata 36116
to top
>gb|AC021010.8| Homo sapiens, clone RP11-69D2, complete sequence
          Length = 187599

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 294    ttgggctacgtgatctatgattgca 318
              |||||||| ||||||||||||||||
Sbjct: 165759 ttgggctatgtgatctatgattgca 165783
to top
>emb|AJ877899.1| Human immunodeficiency virus type 1 subtype A proviral partial
           gp120 gene for envelope glycoprotein gp120, isolate
           97DC.EQTB69 1997
          Length = 584

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 362 aaaatatctcaagaaatacca 382
           |||||||||||||||||||||
Sbjct: 8   aaaatatctcaagaaatacca 28
to top
>gb|AC124749.5| Mus musculus BAC clone RP23-262G23 from chromosome 5, complete sequence
          Length = 209986

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 256    ctacaactaccactcctggcgtgt 279
              |||| |||||||||||||||||||
Sbjct: 127320 ctactactaccactcctggcgtgt 127297
to top
>gb|AC126046.3| Mus musculus BAC clone RP23-176P24 from chromosome 19, complete
             sequence
          Length = 240536

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 250   tcactactacaactaccact 269
             ||||||||||||||||||||
Sbjct: 79882 tcactactacaactaccact 79863
to top
>gb|AC126439.3| Mus musculus BAC clone RP24-290I17 from chromosome 14, complete
             sequence
          Length = 163978

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 497   tgtaccaccttgcaatgcca 516
             ||||||||||||||||||||
Sbjct: 16134 tgtaccaccttgcaatgcca 16115
to top
>gb|AC125464.4| Mus musculus BAC clone RP23-113C9 from 14, complete sequence
          Length = 203804

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 374    gaaataccatcttaaccatc 393
              ||||||||||||||||||||
Sbjct: 114125 gaaataccatcttaaccatc 114144
to top
>emb|AL122014.27|HSDJ874H1 Human DNA sequence from clone RP5-874H1 on chromosome 11p12-14.1
             Contains STSs and GSSs, complete sequence
          Length = 98061

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 406   aaaacaagggctttggaata 425
             ||||||||||||||||||||
Sbjct: 45736 aaaacaagggctttggaata 45717
to top
>gb|AC068295.15| Homo sapiens 3 BAC RP11-44H4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 170867

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 269   tcctggcgtgtttggaggtggcctgttg 296
             ||||||| ||| ||||||||||||||||
Sbjct: 17338 tcctggcttgtctggaggtggcctgttg 17311
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>ref|NM_001027786.1| Caenorhabditis elegans Y82E9BL.18 (Y82E9BL.18) mRNA, complete cds
          Length = 1500

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 380 ccatcttaaccatcacttca 399
           ||||||||||||||||||||
Sbjct: 351 ccatcttaaccatcacttca 370
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>dbj|BS000088.1| Pan troglodytes chromosome 22 clone:RP43-078B15, map 22, complete
             sequences
          Length = 198333

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 502   caccttgcaatgccagatatcaag 525
             ||||||| ||||||||||||||||
Sbjct: 65985 caccttgtaatgccagatatcaag 65962
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>gb|AC008000.7|AC008000 Homo sapiens 3q25-26 BAC CITB-371O18 (California Institute of
            Technology BAC Library) complete sequence
          Length = 131105

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 582  gtcacttgaagtgcttgtca 601
            ||||||||||||||||||||
Sbjct: 1869 gtcacttgaagtgcttgtca 1850
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>gb|AC131727.4| Mus musculus BAC clone RP23-120E19 from 14, complete sequence
          Length = 208338

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 497    tgtaccaccttgcaatgcca 516
              ||||||||||||||||||||
Sbjct: 193936 tgtaccaccttgcaatgcca 193917
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>dbj|AP001688.1| Homo sapiens genomic DNA, chromosome 21q, section 32/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 502  caccttgcaatgccagatatcaag 525
            ||||||| ||||||||||||||||
Sbjct: 6647 caccttgtaatgccagatatcaag 6624
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>dbj|AP002793.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-691L4, complete
             sequence
          Length = 181140

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 393   cacttcagaattcaaaacaa 412
             ||||||||||||||||||||
Sbjct: 99039 cacttcagaattcaaaacaa 99058
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>gb|AC087081.2| Caenorhabditis elegans cosmid Y82E9BL, complete sequence
          Length = 50455

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 380   ccatcttaaccatcacttca 399
             ||||||||||||||||||||
Sbjct: 24493 ccatcttaaccatcacttca 24512
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>gb|AC147645.3| Gallus gallus BAC clone CH261-121C23 from chromosome unknown, complete
             sequence
          Length = 158903

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 578   agatgtcacttgaagtgctt 597
             ||||||||||||||||||||
Sbjct: 59583 agatgtcacttgaagtgctt 59564
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>dbj|AP004983.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT04L20, TM0437b,
             complete sequence
          Length = 51960

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                         
Query: 135   cattatcttctgcatggatgccatcacaagcacccaatggatgg 178
             ||||||||||| ||||| ||||| || ||||| || ||||||||
Sbjct: 19974 cattatcttctccatggctgccaccataagcatcccatggatgg 20017
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>gb|AC018839.5| Homo sapiens chromosome 3 clone RP11-593J10 map 3p, complete sequence
          Length = 182288

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 582   gtcacttgaagtgcttgtca 601
             ||||||||||||||||||||
Sbjct: 83102 gtcacttgaagtgcttgtca 83121
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>gb|AC090841.2| Homo sapiens chromosome 3 clone RP11-1082A18 map 3p, complete sequence
          Length = 217778

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 582    gtcacttgaagtgcttgtca 601
              ||||||||||||||||||||
Sbjct: 214827 gtcacttgaagtgcttgtca 214846
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>dbj|AP000965.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B875P4,
             LL56-APP region, complete sequence
          Length = 88046

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 502   caccttgcaatgccagatatcaag 525
             ||||||| ||||||||||||||||
Sbjct: 64831 caccttgtaatgccagatatcaag 64808
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>emb|AL772336.5| Mouse DNA sequence from clone RP23-180H12 on chromosome 4, complete
             sequence
          Length = 154034

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   aaacacggctcattatcttc 144
             ||||||||||||||||||||
Sbjct: 13554 aaacacggctcattatcttc 13573


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,630,165
Number of Sequences: 3902068
Number of extensions: 4630165
Number of successful extensions: 93642
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93403
Number of HSP's gapped (non-prelim): 237
length of query: 621
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 598
effective length of database: 17,143,297,704
effective search space: 10251692026992
effective search space used: 10251692026992
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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