ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags9h20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_482965.1| Oryza sativa (japonica cultivar-group), mRNA 486 e-134
2dbj|AB110175.1| Oryza sativa (japonica cultivar-group) mRNA for ... 486 e-134
3dbj|AK068050.1| Oryza sativa (japonica cultivar-group) cDNA clon... 486 e-134
4gb|BT017299.1| Zea mays clone EL01N0316B09.c mRNA sequence 424 e-115
5dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 206 6e-50
6dbj|AP003917.3| Oryza sativa (japonica cultivar-group) genomic D... 206 6e-50
7ref|NM_115090.3| Arabidopsis thaliana unknown protein AT3G52300 ... 127 4e-26
8gb|AY094036.1| Arabidopsis thaliana AT3g52300/T25B15_70 mRNA, co... 127 4e-26
9gb|AY050330.1| Arabidopsis thaliana AT3g52300/T25B15_70 mRNA, co... 127 4e-26
10emb|BX823984.1|CNS0A5JI Arabidopsis thaliana Full-length cDNA Co... 127 4e-26
11gb|AY086788.1| Arabidopsis thaliana clone 27681 mRNA, complete s... 127 4e-26
12emb|AJ271469.1|ATH271469 Arabidopsis thaliana mRNA for mitochond... 127 4e-26
13emb|BX822199.1|CNS0A5TC Arabidopsis thaliana Full-length cDNA Co... 111 3e-21
14emb|AL132972.1|ATT25B15 Arabidopsis thaliana DNA chromosome 3, B... 100 1e-17
15ref|NM_001035768.1| Arabidopsis thaliana unknown protein AT3G523... 96 2e-16
16emb|BX823132.1|CNS0A5WR Arabidopsis thaliana Full-length cDNA Co... 96 2e-16
17emb|AJ843973.1| Plantago major mRNA for mitochondrial F0 ATP syn... 90 9e-15
18gb|BT013973.1| Lycopersicon esculentum clone 133018R, mRNA sequence 86 1e-13
19emb|BX822317.1|CNS0A5WN Arabidopsis thaliana Full-length cDNA Co... 80 9e-12
20gb|AC144484.5| Medicago truncatula clone mth2-30o16, complete se... 72 2e-09
21gb|AC152818.17| Medicago truncatula clone mth2-85g12, complete s... 72 2e-09
22gb|AC142210.1| Solanum demissum chromosome 11 BAC PGEC589 genomi... 54 5e-04
23emb|X80765.1|PPPHEHYD P.putida genes for phenolhydroxylase 48 0.032
24emb|X52805.1|PPDMPCD Pseudomonas putida dmpC and dmpD genes for ... 48 0.032
25dbj|D83057.1| Pseudomonas aeruginosa DNA for catechol 2,3-dioxyg... 48 0.032
26gb|AC022016.7| Homo sapiens chromosome 10 clone RP11-165M8, comp... 46 0.13
27ref|NG_004788.1| Homo sapiens cofilin pseudogene 1 (CFLP1) on ch... 46 0.13
28gb|AC024226.11|AC024226 Genomic Sequence For Arabidopsis thalian... 46 0.13
29gb|BC031631.1| Homo sapiens cofilin pseudogene 1, mRNA (cDNA clo... 46 0.13
30dbj|AB046441.1| Arabidopsis thaliana DNA, chromosome 5 centromer... 46 0.13
31gb|AF067844.1|AF067844 Homo sapiens chromosome 10 clone PTEN, co... 46 0.13
32gb|AC145944.3| Gallus gallus chromosome UNK clone CH261-22N7, co... 44 0.50
33ref|NM_112685.3| Arabidopsis thaliana HON4; DNA binding AT3G1803... 42 2.0
34gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 42 2.0
35gb|BT006606.1| Arabidopsis thaliana At3g18035 mRNA, complete cds 42 2.0
36emb|BX823749.1|CNS0A6I9 Arabidopsis thaliana Full-length cDNA Co... 42 2.0
37gb|BT002434.1| Arabidopsis thaliana linker histone protein, puta... 42 2.0
38dbj|AB026641.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 42 2.0
39gb|AC147219.5| Mus musculus BAC clone RP23-37K18 from 18, comple... 42 2.0
40gb|AC155253.1| Mus musculus BAC clone RP24-172G9 from 17, comple... 42 2.0
41gb|AC174800.2| Mus musculus BAC clone CH36-125B10 from chromosom... 42 2.0
42emb|CT030652.14| Mouse DNA sequence from clone RP23-48G20 on chr... 42 2.0
43gb|AF491307.2| Pseudomonas putida NCIB 9816-4 plasmid pDTG1, com... 40 7.8
44gb|AY208917.2| Pseudomonas sp. ND6 plasmid pND6-1, complete sequ... 40 7.8
45ref|XM_428367.1| PREDICTED: Gallus gallus similar to chromosome ... 40 7.8
46gb|AY294313.1| Pseudomonas putida NahR (nahR), complete cds; and... 40 7.8
47gb|AC093598.4| Homo sapiens BAC clone RP11-262F18 from 7, comple... 40 7.8
48emb|CR848308.2| Xenopus tropicalis finished cDNA, clone TNeu048i23 40 7.8
49emb|BX530407.26| Zebrafish DNA sequence from clone DKEY-83M22 in... 40 7.8
50gb|AC145331.19| Medicago truncatula clone mth2-8o7, complete seq... 40 7.8
51emb|AL163300.2|HS21C100 Homo sapiens chromosome 21 segment HS21C100 40 7.8
52gb|AC148398.10| Medicago truncatula clone mth2-24c23, complete s... 40 7.8
53emb|AL035691.17|HS249F5 Human DNA sequence from clone RP1-249F5 ... 40 7.8
54emb|AL109810.13|HS1097F14 Human DNA sequence from clone RP5-1097... 40 7.8
55emb|AL049651.2|HSJ753D10 Human DNA sequence from clone RP4-753D1... 40 7.8
56emb|X60740.1|PAXYLEJI1 Pseudomonas aeruginosa xylEJI104-1 gene f... 40 7.8
57emb|AJ544930.2|UBA544930 Pseudomonas sp. 1YdBTEX2 C23O gene for ... 40 7.8
58emb|AJ544924.2|UBA544924 Pseudomonas sp. 1YB2 C23O gene for cate... 40 7.8
59gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome 40 7.8
60emb|BX901878.6| Zebrafish DNA sequence from clone DKEY-11O15 in ... 40 7.8
61emb|AL954250.1| Pan troglodytes chromosome 22 clone RP43-013I15 ... 40 7.8
62emb|AL954249.1| Pan troglodytes chromosome 22 clone PTB-105M10 m... 40 7.8
63emb|BX284112.25| Zebrafish DNA sequence from clone DKEYP-75A7 in... 40 7.8
64gb|AF525494.1| Pseudomonas fluorescens plasmid pLP6a catechol-2,... 40 7.8
65ref|XM_700803.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 7.8
66emb|BX649522.15| Zebrafish DNA sequence from clone DKEY-40I22 in... 40 7.8
67ref|XM_691529.1| PREDICTED: Danio rerio similar to Dual specific... 40 7.8
68gb|AC090958.3| Homo sapiens chromosome 3 clone RP11-758G22 map 3... 40 7.8
69gb|U01825.1|PSU01825 Pseudomonas sp. IC catechol 2,3-dioxygenase... 40 7.8
70gb|AY228547.1| Pseudomonas sp. A2YC1 catechol 2,3-dioxygenase (c... 40 7.8
71gb|AF478380.1| Vitis vinifera isolate 1R1 copia-like retrotransp... 40 7.8
72emb|AJ582631.1|PST582631 Pseudomonas stutzeri nahT gene, partial... 40 7.8
73emb|AL773536.21| Mouse DNA sequence from clone RP23-186J20 on ch... 40 7.8
74gb|AF039534.1|AF039534 Pseuodmonas stutzeri transposase-like pro... 40 7.8
75dbj|AP006274.1| Papio hamadryas genomic DNA, BAC clone: RPCI41-2... 40 7.8
76dbj|AP006273.1| Papio hamadryas genomic DNA, BAC clone: RPCI41-3... 40 7.8
77dbj|AP006272.1| Pan troglodytes genomic DNA, BAC clone: RPCI43-1... 40 7.8
78emb|AL049781.5|CNS00003 Human chromosome 14 DNA sequence BAC R-3... 40 7.8
79emb|AL773602.1|HS314N7 Homo sapiens chromosome 21 from PAC RP1-3... 40 7.8
80dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 7.8
81dbj|AP001068.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 7.8
82dbj|AB001722.1| Pseudomonas stutzeri carbazole catabolic genes, ... 40 7.8 
>ref|XM_482965.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 927

 Score =  486 bits (245), Expect = e-134
 Identities = 431/493 (87%)
 Strand = Plus / Plus

                                                                       
Query: 75  gtgaagaaggtggcggacgttgcggccaaggccgggaaggcgatcgactgggacggcatg 134
           ||||||||||||||||| || || || |||||||||||||||||||||||||| || |||
Sbjct: 131 gtgaagaaggtggcggaggtggccgcgaaggccgggaaggcgatcgactgggaggggatg 190

                                                                       
Query: 135 gcgaagatgctcgtctccgaggaggcccggaaggagttcgccaacctccgccgcaccttc 194
           || ||||||||||||||||| ||||| || |||||||||  || ||||||||||||||||
Sbjct: 191 gccaagatgctcgtctccgacgaggcgcgcaaggagttcaacaccctccgccgcaccttc 250

                                                                       
Query: 195 gaggacgtcaaccaccagctccagaccaagttctcccaggaaccacagccaattgactgg 254
           ||||||||||||||||||||||||||||||||||| ||||| || || || |||||||||
Sbjct: 251 gaggacgtcaaccaccagctccagaccaagttctctcaggagccccaaccgattgactgg 310

                                                                       
Query: 255 gaatactacagaaaaggaatcggatcaaaagttgtggatatgtacaaggaggcttatgat 314
           || ||||||||||||||||| || || |||||||| |||||||||||||| |||||||| 
Sbjct: 311 gagtactacagaaaaggaattgggtctaaagttgtagatatgtacaaggaagcttatgaa 370

                                                                       
Query: 315 agcattgagatcccgaagtatgttgacactgtcactcctcggtataagccaaagtttgat 374
           |||||||| ||||| ||||| |||||||| || ||||||| ||| |||||||||||||||
Sbjct: 371 agcattgaaatccccaagtacgttgacaccgtgactcctcagtacaagccaaagtttgat 430

                                                                       
Query: 375 gctctgttagtcgaattgaaggaggcagagaagacatctctgaaggaatcagagaggata 434
           || ||| | || ||  |||| || ||||| |||   ||||||||||| ||||||||||||
Sbjct: 431 gcgctgcttgttgagctgaaagaagcagaaaaggagtctctgaaggagtcagagaggata 490

                                                                       
Query: 435 gagaaggagattgctgaaatgaaggagatgaagaaaaagatcagcacaatgacagcagac 494
           ||||||||| |||||||| || |||||||||||||||| |||||||||||||||||||| 
Sbjct: 491 gagaaggagcttgctgaattgcaggagatgaagaaaaatatcagcacaatgacagcagat 550

                                                                       
Query: 495 gagtactttgcgaagcaccctgaactcaagaagaagtttgatgatgagatgcgtaacgat 554
           || |||||||| ||||| |||||  ||||| ||||||| |||||||| || |||||||| 
Sbjct: 551 gaatactttgcaaagcatcctgaggtcaagcagaagttcgatgatgaaatccgtaacgac 610

                        
Query: 555 tactggggatact 567
            ||||||| ||||
Sbjct: 611 aactggggctact 623
to top
>dbj|AB110175.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical
           protein, complete cds, clone: 13YPG010
          Length = 893

 Score =  486 bits (245), Expect = e-134
 Identities = 431/493 (87%)
 Strand = Plus / Plus

                                                                       
Query: 75  gtgaagaaggtggcggacgttgcggccaaggccgggaaggcgatcgactgggacggcatg 134
           ||||||||||||||||| || || || |||||||||||||||||||||||||| || |||
Sbjct: 63  gtgaagaaggtggcggaggtggccgcgaaggccgggaaggcgatcgactgggaggggatg 122

                                                                       
Query: 135 gcgaagatgctcgtctccgaggaggcccggaaggagttcgccaacctccgccgcaccttc 194
           || ||||||||||||||||| ||||| || |||||||||  || ||||||||||||||||
Sbjct: 123 gccaagatgctcgtctccgacgaggcgcgcaaggagttcaacaccctccgccgcaccttc 182

                                                                       
Query: 195 gaggacgtcaaccaccagctccagaccaagttctcccaggaaccacagccaattgactgg 254
           ||||||||||||||||||||||||||||||||||| ||||| || || || |||||||||
Sbjct: 183 gaggacgtcaaccaccagctccagaccaagttctctcaggagccccaaccgattgactgg 242

                                                                       
Query: 255 gaatactacagaaaaggaatcggatcaaaagttgtggatatgtacaaggaggcttatgat 314
           || ||||||||||||||||| || || |||||||| |||||||||||||| |||||||| 
Sbjct: 243 gagtactacagaaaaggaattgggtctaaagttgtagatatgtacaaggaagcttatgaa 302

                                                                       
Query: 315 agcattgagatcccgaagtatgttgacactgtcactcctcggtataagccaaagtttgat 374
           |||||||| ||||| ||||| |||||||| || ||||||| ||| |||||||||||||||
Sbjct: 303 agcattgaaatccccaagtacgttgacaccgtgactcctcagtacaagccaaagtttgat 362

                                                                       
Query: 375 gctctgttagtcgaattgaaggaggcagagaagacatctctgaaggaatcagagaggata 434
           || ||| | || ||  |||| || ||||| |||   ||||||||||| ||||||||||||
Sbjct: 363 gcgctgcttgttgagctgaaagaagcagaaaaggagtctctgaaggagtcagagaggata 422

                                                                       
Query: 435 gagaaggagattgctgaaatgaaggagatgaagaaaaagatcagcacaatgacagcagac 494
           ||||||||| |||||||| || |||||||||||||||| |||||||||||||||||||| 
Sbjct: 423 gagaaggagcttgctgaattgcaggagatgaagaaaaatatcagcacaatgacagcagat 482

                                                                       
Query: 495 gagtactttgcgaagcaccctgaactcaagaagaagtttgatgatgagatgcgtaacgat 554
           || |||||||| ||||| |||||  ||||| ||||||| |||||||| || |||||||| 
Sbjct: 483 gaatactttgcaaagcatcctgaggtcaagcagaagttcgatgatgaaatccgtaacgac 542

                        
Query: 555 tactggggatact 567
            ||||||| ||||
Sbjct: 543 aactggggctact 555
to top
>dbj|AK068050.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131P20, full
           insert sequence
          Length = 927

 Score =  486 bits (245), Expect = e-134
 Identities = 431/493 (87%)
 Strand = Plus / Plus

                                                                       
Query: 75  gtgaagaaggtggcggacgttgcggccaaggccgggaaggcgatcgactgggacggcatg 134
           ||||||||||||||||| || || || |||||||||||||||||||||||||| || |||
Sbjct: 131 gtgaagaaggtggcggaggtggccgcgaaggccgggaaggcgatcgactgggaggggatg 190

                                                                       
Query: 135 gcgaagatgctcgtctccgaggaggcccggaaggagttcgccaacctccgccgcaccttc 194
           || ||||||||||||||||| ||||| || |||||||||  || ||||||||||||||||
Sbjct: 191 gccaagatgctcgtctccgacgaggcgcgcaaggagttcaacaccctccgccgcaccttc 250

                                                                       
Query: 195 gaggacgtcaaccaccagctccagaccaagttctcccaggaaccacagccaattgactgg 254
           ||||||||||||||||||||||||||||||||||| ||||| || || || |||||||||
Sbjct: 251 gaggacgtcaaccaccagctccagaccaagttctctcaggagccccaaccgattgactgg 310

                                                                       
Query: 255 gaatactacagaaaaggaatcggatcaaaagttgtggatatgtacaaggaggcttatgat 314
           || ||||||||||||||||| || || |||||||| |||||||||||||| |||||||| 
Sbjct: 311 gagtactacagaaaaggaattgggtctaaagttgtagatatgtacaaggaagcttatgaa 370

                                                                       
Query: 315 agcattgagatcccgaagtatgttgacactgtcactcctcggtataagccaaagtttgat 374
           |||||||| ||||| ||||| |||||||| || ||||||| ||| |||||||||||||||
Sbjct: 371 agcattgaaatccccaagtacgttgacaccgtgactcctcagtacaagccaaagtttgat 430

                                                                       
Query: 375 gctctgttagtcgaattgaaggaggcagagaagacatctctgaaggaatcagagaggata 434
           || ||| | || ||  |||| || ||||| |||   ||||||||||| ||||||||||||
Sbjct: 431 gcgctgcttgttgagctgaaagaagcagaaaaggagtctctgaaggagtcagagaggata 490

                                                                       
Query: 435 gagaaggagattgctgaaatgaaggagatgaagaaaaagatcagcacaatgacagcagac 494
           ||||||||| |||||||| || |||||||||||||||| |||||||||||||||||||| 
Sbjct: 491 gagaaggagcttgctgaattgcaggagatgaagaaaaatatcagcacaatgacagcagat 550

                                                                       
Query: 495 gagtactttgcgaagcaccctgaactcaagaagaagtttgatgatgagatgcgtaacgat 554
           || |||||||| ||||| |||||  ||||| ||||||| |||||||| || |||||||| 
Sbjct: 551 gaatactttgcaaagcatcctgaggtcaagcagaagttcgatgatgaaatccgtaacgac 610

                        
Query: 555 tactggggatact 567
            ||||||| ||||
Sbjct: 611 aactggggctact 623
to top
>gb|BT017299.1| Zea mays clone EL01N0316B09.c mRNA sequence
          Length = 778

 Score =  424 bits (214), Expect = e-115
 Identities = 393/450 (87%), Gaps = 2/450 (0%)
 Strand = Plus / Plus

                                                                       
Query: 117 atcgactgggacggcatggcgaagatgctcgtctccgaggaggcccggaaggagttcgcc 176
           |||||||||||||||||||| ||| |||||||| |||| ||||| || ||||||||||||
Sbjct: 83  atcgactgggacggcatggccaagttgctcgtcaccgacgaggcgcgcaaggagttcgcc 142

                                                                       
Query: 177 aacctccgccgcaccttcgaggacgtcaaccaccagctccagaccaagttctcccaggaa 236
             |||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 143 gccctccgccgcgctttcgatgacgtcaaccaccagctccagaccaagttctcccaggaa 202

                                                                       
Query: 237 ccacagccaattgactgggaatactacagaaaaggaatcggatcaaaagttgtggatatg 296
           || ||||| ||||| ||||| ||||||||||||||||| ||||||||||| |||||||||
Sbjct: 203 ccccagccgattgattgggagtactacagaaaaggaattggatcaaaagtggtggatatg 262

                                                                       
Query: 297 tacaaggaggcttatgatagcattgagatcccgaagtatgttgacactgtcactcctcgg 356
           ||||| ||||||| ||| ||||| |||||||||||||| || ||||| || ||||| | |
Sbjct: 263 tacaaagaggcttttgaaagcatcgagatcccgaagtacgtcgacacagttactccccag 322

                                                                       
Query: 357 tataagccaaagtttgatgctctgttagtcgaattgaaggaggcagagaagacatc-tct 415
           || |||||||||||||||||| || | |  ||||| |||||||| ||||| | | | || 
Sbjct: 323 tacaagccaaagtttgatgctgtgattgctgaattaaaggaggctgagaa-agagcatca 381

                                                                       
Query: 416 gaaggaatcagagaggatagagaaggagattgctgaaatgaaggagatgaagaaaaagat 475
           |||||| ||||| ||||||||||||||  ||||||||||| |||| |||| |||||||||
Sbjct: 382 gaaggagtcagaaaggatagagaaggaacttgctgaaatggaggaaatgaggaaaaagat 441

                                                                       
Query: 476 cagcacaatgacagcagacgagtactttgcgaagcaccctgaactcaagaagaagtttga 535
           ||| |||||||||||||| || ||||||| |||| |||||||||||| ||||||||||||
Sbjct: 442 cagtacaatgacagcagatgattactttgagaagtaccctgaactcaggaagaagtttga 501

                                         
Query: 536 tgatgagatgcgtaacgattactggggata 565
            ||||| || ||||||||| ||||||||||
Sbjct: 502 cgatgaaatccgtaacgataactggggata 531
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  206 bits (104), Expect = 6e-50
 Identities = 146/160 (91%)
 Strand = Plus / Minus

                                                                            
Query: 75       gtgaagaaggtggcggacgttgcggccaaggccgggaaggcgatcgactgggacggcatg 134
                ||||||||||||||||| || || || |||||||||||||||||||||||||| || |||
Sbjct: 23574777 gtgaagaaggtggcggaggtggccgcgaaggccgggaaggcgatcgactgggaggggatg 23574718

                                                                            
Query: 135      gcgaagatgctcgtctccgaggaggcccggaaggagttcgccaacctccgccgcaccttc 194
                || ||||||||||||||||| ||||| || |||||||||  || ||||||||||||||||
Sbjct: 23574717 gccaagatgctcgtctccgacgaggcgcgcaaggagttcaacaccctccgccgcaccttc 23574658

                                                        
Query: 195      gaggacgtcaaccaccagctccagaccaagttctcccagg 234
                ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 23574657 gaggacgtcaaccaccagctccagaccaagttctctcagg 23574618



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 88/102 (86%)
 Strand = Plus / Minus

                                                                            
Query: 466      agaaaaagatcagcacaatgacagcagacgagtactttgcgaagcaccctgaactcaaga 525
                ||||||| |||||||||||||||||||| || |||||||| ||||| |||||  ||||| 
Sbjct: 23572459 agaaaaatatcagcacaatgacagcagatgaatactttgcaaagcatcctgaggtcaagc 23572400

                                                          
Query: 526      agaagtttgatgatgagatgcgtaacgattactggggatact 567
                ||||||| |||||||| || ||||||||  ||||||| ||||
Sbjct: 23572399 agaagttcgatgatgaaatccgtaacgacaactggggctact 23572358



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                            
Query: 246      attgactgggaatactacagaaaaggaatcggatcaaaagttgtggatatgtacaaggag 305
                ||||||||||| ||||||||||||||||| || || |||||||| |||||||||||||| 
Sbjct: 23573948 attgactgggagtactacagaaaaggaattgggtctaaagttgtagatatgtacaaggaa 23573889

                        
Query: 306      gcttatga 313
                ||||||||
Sbjct: 23573888 gcttatga 23573881



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                         
Query: 411      tctctgaaggaatcagagaggatagagaaggagattgctgaaatgaaggagatgaag 467
                ||||||||||| ||||||||||||||||||||| |||||||| || |||||||||||
Sbjct: 23572637 tctctgaaggagtcagagaggatagagaaggagcttgctgaattgcaggagatgaag 23572581



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                            
Query: 316      gcattgagatcccgaagtatgttgacactgtcactcctcggtataagccaaagtttgatg 375
                ||||||| ||||| ||||| |||||||| || ||||||| ||| ||||||||||||||||
Sbjct: 23572886 gcattgaaatccccaagtacgttgacaccgtgactcctcagtacaagccaaagtttgatg 23572827

                 
Query: 376      c 376
                |
Sbjct: 23572826 c 23572826
to top
>dbj|AP003917.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1666_A04
          Length = 90097

 Score =  206 bits (104), Expect = 6e-50
 Identities = 146/160 (91%)
 Strand = Plus / Minus

                                                                         
Query: 75    gtgaagaaggtggcggacgttgcggccaaggccgggaaggcgatcgactgggacggcatg 134
             ||||||||||||||||| || || || |||||||||||||||||||||||||| || |||
Sbjct: 54552 gtgaagaaggtggcggaggtggccgcgaaggccgggaaggcgatcgactgggaggggatg 54493

                                                                         
Query: 135   gcgaagatgctcgtctccgaggaggcccggaaggagttcgccaacctccgccgcaccttc 194
             || ||||||||||||||||| ||||| || |||||||||  || ||||||||||||||||
Sbjct: 54492 gccaagatgctcgtctccgacgaggcgcgcaaggagttcaacaccctccgccgcaccttc 54433

                                                     
Query: 195   gaggacgtcaaccaccagctccagaccaagttctcccagg 234
             ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 54432 gaggacgtcaaccaccagctccagaccaagttctctcagg 54393



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 88/102 (86%)
 Strand = Plus / Minus

                                                                         
Query: 466   agaaaaagatcagcacaatgacagcagacgagtactttgcgaagcaccctgaactcaaga 525
             ||||||| |||||||||||||||||||| || |||||||| ||||| |||||  ||||| 
Sbjct: 52234 agaaaaatatcagcacaatgacagcagatgaatactttgcaaagcatcctgaggtcaagc 52175

                                                       
Query: 526   agaagtttgatgatgagatgcgtaacgattactggggatact 567
             ||||||| |||||||| || ||||||||  ||||||| ||||
Sbjct: 52174 agaagttcgatgatgaaatccgtaacgacaactggggctact 52133



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                         
Query: 246   attgactgggaatactacagaaaaggaatcggatcaaaagttgtggatatgtacaaggag 305
             ||||||||||| ||||||||||||||||| || || |||||||| |||||||||||||| 
Sbjct: 53723 attgactgggagtactacagaaaaggaattgggtctaaagttgtagatatgtacaaggaa 53664

                     
Query: 306   gcttatga 313
             ||||||||
Sbjct: 53663 gcttatga 53656



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                      
Query: 411   tctctgaaggaatcagagaggatagagaaggagattgctgaaatgaaggagatgaag 467
             ||||||||||| ||||||||||||||||||||| |||||||| || |||||||||||
Sbjct: 52412 tctctgaaggagtcagagaggatagagaaggagcttgctgaattgcaggagatgaag 52356



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                         
Query: 316   gcattgagatcccgaagtatgttgacactgtcactcctcggtataagccaaagtttgatg 375
             ||||||| ||||| ||||| |||||||| || ||||||| ||| ||||||||||||||||
Sbjct: 52661 gcattgaaatccccaagtacgttgacaccgtgactcctcagtacaagccaaagtttgatg 52602

              
Query: 376   c 376
             |
Sbjct: 52601 c 52601
to top
>ref|NM_115090.3| Arabidopsis thaliana unknown protein AT3G52300 transcript variant
           AT3G52300.1 mRNA, complete cds
          Length = 889

 Score =  127 bits (64), Expect = 4e-26
 Identities = 220/272 (80%)
 Strand = Plus / Plus

                                                                       
Query: 296 gtacaaggaggcttatgatagcattgagatcccgaagtatgttgacactgtcactcctcg 355
           ||||||||| |||||||| ||||||||||| || ||||| |||||||  || ||||||  
Sbjct: 358 gtacaaggaagcttatgacagcattgagattccaaagtacgttgacaaagttactcctga 417

                                                                       
Query: 356 gtataagccaaagtttgatgctctgttagtcgaattgaaggaggcagagaagacatctct 415
            || |||||||||||||||||| |||| || ||| |||| || |||||  ||| ||| ||
Sbjct: 418 atacaagccaaagtttgatgctttgttggtggaactgaaagaagcagaacagaaatcgct 477

                                                                       
Query: 416 gaaggaatcagagaggatagagaaggagattgctgaaatgaaggagatgaagaaaaagat 475
            ||||| || ||  || | ||||| || ||||||||  |  | ||||| |  |||||| |
Sbjct: 478 caaggagtctgaacggttggagaaagaaattgctgatgtccaagagatcagcaaaaagct 537

                                                                       
Query: 476 cagcacaatgacagcagacgagtactttgcgaagcaccctgaactcaagaagaagtttga 535
           |||||| ||||| ||||| |||||||||| ||||||||| |||||||| |||||||||||
Sbjct: 538 cagcaccatgactgcagatgagtactttgagaagcacccggaactcaaaaagaagtttga 597

                                           
Query: 536 tgatgagatgcgtaacgattactggggatact 567
           ||| || || ||||| ||  ||||||||||||
Sbjct: 598 tgacgaaatccgtaatgacaactggggatact 629
to top
>gb|AY094036.1| Arabidopsis thaliana AT3g52300/T25B15_70 mRNA, complete cds
          Length = 507

 Score =  127 bits (64), Expect = 4e-26
 Identities = 220/272 (80%)
 Strand = Plus / Plus

                                                                       
Query: 296 gtacaaggaggcttatgatagcattgagatcccgaagtatgttgacactgtcactcctcg 355
           ||||||||| |||||||| ||||||||||| || ||||| |||||||  || ||||||  
Sbjct: 234 gtacaaggaagcttatgacagcattgagattccaaagtacgttgacaaagttactcctga 293

                                                                       
Query: 356 gtataagccaaagtttgatgctctgttagtcgaattgaaggaggcagagaagacatctct 415
            || |||||||||||||||||| |||| || ||| |||| || |||||  ||| ||| ||
Sbjct: 294 atacaagccaaagtttgatgctttgttggtggaactgaaagaagcagaacagaaatcgct 353

                                                                       
Query: 416 gaaggaatcagagaggatagagaaggagattgctgaaatgaaggagatgaagaaaaagat 475
            ||||| || ||  || | ||||| || ||||||||  |  | ||||| |  |||||| |
Sbjct: 354 caaggagtctgaacggttggagaaagaaattgctgatgtccaagagatcagcaaaaagct 413

                                                                       
Query: 476 cagcacaatgacagcagacgagtactttgcgaagcaccctgaactcaagaagaagtttga 535
           |||||| ||||| ||||| |||||||||| ||||||||| |||||||| |||||||||||
Sbjct: 414 cagcaccatgactgcagatgagtactttgagaagcacccggaactcaaaaagaagtttga 473

                                           
Query: 536 tgatgagatgcgtaacgattactggggatact 567
           ||| || || ||||| ||  ||||||||||||
Sbjct: 474 tgacgaaatccgtaatgacaactggggatact 505
to top
>gb|AY050330.1| Arabidopsis thaliana AT3g52300/T25B15_70 mRNA, complete cds
          Length = 812

 Score =  127 bits (64), Expect = 4e-26
 Identities = 220/272 (80%)
 Strand = Plus / Plus

                                                                       
Query: 296 gtacaaggaggcttatgatagcattgagatcccgaagtatgttgacactgtcactcctcg 355
           ||||||||| |||||||| ||||||||||| || ||||| |||||||  || ||||||  
Sbjct: 309 gtacaaggaagcttatgacagcattgagattccaaagtacgttgacaaagttactcctga 368

                                                                       
Query: 356 gtataagccaaagtttgatgctctgttagtcgaattgaaggaggcagagaagacatctct 415
            || |||||||||||||||||| |||| || ||| |||| || |||||  ||| ||| ||
Sbjct: 369 atacaagccaaagtttgatgctttgttggtggaactgaaagaagcagaacagaaatcgct 428

                                                                       
Query: 416 gaaggaatcagagaggatagagaaggagattgctgaaatgaaggagatgaagaaaaagat 475
            ||||| || ||  || | ||||| || ||||||||  |  | ||||| |  |||||| |
Sbjct: 429 caaggagtctgaacggttggagaaagaaattgctgatgtccaagagatcagcaaaaagct 488

                                                                       
Query: 476 cagcacaatgacagcagacgagtactttgcgaagcaccctgaactcaagaagaagtttga 535
           |||||| ||||| ||||| |||||||||| ||||||||| |||||||| |||||||||||
Sbjct: 489 cagcaccatgactgcagatgagtactttgagaagcacccggaactcaaaaagaagtttga 548

                                           
Query: 536 tgatgagatgcgtaacgattactggggatact 567
           ||| || || ||||| ||  ||||||||||||
Sbjct: 549 tgacgaaatccgtaatgacaactggggatact 580
to top
>emb|BX823984.1|CNS0A5JI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH12ZD02 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 712

 Score =  127 bits (64), Expect = 4e-26
 Identities = 220/272 (80%)
 Strand = Plus / Plus

                                                                       
Query: 296 gtacaaggaggcttatgatagcattgagatcccgaagtatgttgacactgtcactcctcg 355
           ||||||||| |||||||| ||||||||||| || ||||| |||||||  || ||||||  
Sbjct: 203 gtacaaggaagcttatgacagcattgagattccaaagtacgttgacaaagttactcctga 262

                                                                       
Query: 356 gtataagccaaagtttgatgctctgttagtcgaattgaaggaggcagagaagacatctct 415
            || |||||||||||||||||| |||| || ||| |||| || |||||  ||| ||| ||
Sbjct: 263 atacaagccaaagtttgatgctttgttggtggaactgaaagaagcagaacagaaatcgct 322

                                                                       
Query: 416 gaaggaatcagagaggatagagaaggagattgctgaaatgaaggagatgaagaaaaagat 475
            ||||| || ||  || | ||||| || ||||||||  |  | ||||| |  |||||| |
Sbjct: 323 caaggagtctgaacggttggagaaagaaattgctgatgtccaagagatcagcaaaaagct 382

                                                                       
Query: 476 cagcacaatgacagcagacgagtactttgcgaagcaccctgaactcaagaagaagtttga 535
           |||||| ||||| ||||| |||||||||| ||||||||| |||||||| |||||||||||
Sbjct: 383 cagcaccatgactgcagatgagtactttgagaagcacccggaactcaaaaagaagtttga 442

                                           
Query: 536 tgatgagatgcgtaacgattactggggatact 567
           ||| || || ||||| ||  ||||||||||||
Sbjct: 443 tgacgaaatccgtaatgacaactggggatact 474
to top
>gb|AY086788.1| Arabidopsis thaliana clone 27681 mRNA, complete sequence
          Length = 789

 Score =  127 bits (64), Expect = 4e-26
 Identities = 220/272 (80%)
 Strand = Plus / Plus

                                                                       
Query: 296 gtacaaggaggcttatgatagcattgagatcccgaagtatgttgacactgtcactcctcg 355
           ||||||||| |||||||| ||||||||||| || ||||| |||||||  || ||||||  
Sbjct: 358 gtacaaggaagcttatgacagcattgagattccaaagtacgttgacaaagttactcctga 417

                                                                       
Query: 356 gtataagccaaagtttgatgctctgttagtcgaattgaaggaggcagagaagacatctct 415
            || |||||||||||||||||| |||| || ||| |||| || |||||  ||| ||| ||
Sbjct: 418 atacaagccaaagtttgatgctttgttggtggaactgaaagaagcagaacagaaatcgct 477

                                                                       
Query: 416 gaaggaatcagagaggatagagaaggagattgctgaaatgaaggagatgaagaaaaagat 475
            ||||| || ||  || | ||||| || ||||||||  |  | ||||| |  |||||| |
Sbjct: 478 caaggagtctgaacggttggagaaagaaattgctgatgtccaagagatcagcaaaaagct 537

                                                                       
Query: 476 cagcacaatgacagcagacgagtactttgcgaagcaccctgaactcaagaagaagtttga 535
           |||||| ||||| ||||| |||||||||| ||||||||| |||||||| |||||||||||
Sbjct: 538 cagcaccatgactgcagatgagtactttgagaagcacccggaactcaaaaagaagtttga 597

                                           
Query: 536 tgatgagatgcgtaacgattactggggatact 567
           ||| || || ||||| ||  ||||||||||||
Sbjct: 598 tgacgaaatccgtaatgacaactggggatact 629
to top
>emb|AJ271469.1|ATH271469 Arabidopsis thaliana mRNA for mitochondrial F0 ATP synthase D chain
           (p_D gene)
          Length = 720

 Score =  127 bits (64), Expect = 4e-26
 Identities = 220/272 (80%)
 Strand = Plus / Plus

                                                                       
Query: 296 gtacaaggaggcttatgatagcattgagatcccgaagtatgttgacactgtcactcctcg 355
           ||||||||| |||||||| ||||||||||| || ||||| |||||||  || ||||||  
Sbjct: 213 gtacaaggaagcttatgacagcattgagattccaaagtacgttgacaaagttactcctga 272

                                                                       
Query: 356 gtataagccaaagtttgatgctctgttagtcgaattgaaggaggcagagaagacatctct 415
            || |||||||||||||||||| |||| || ||| |||| || |||||  ||| ||| ||
Sbjct: 273 atacaagccaaagtttgatgctttgttggtggaactgaaagaagcagaacagaaatcgct 332

                                                                       
Query: 416 gaaggaatcagagaggatagagaaggagattgctgaaatgaaggagatgaagaaaaagat 475
            ||||| || ||  || | ||||| || ||||||||  |  | ||||| |  |||||| |
Sbjct: 333 caaggagtctgaacggttggagaaagaaattgctgatgtccaagagatcagcaaaaagct 392

                                                                       
Query: 476 cagcacaatgacagcagacgagtactttgcgaagcaccctgaactcaagaagaagtttga 535
           |||||| ||||| ||||| |||||||||| ||||||||| |||||||| |||||||||||
Sbjct: 393 cagcaccatgactgcagatgagtactttgagaagcacccggaactcaaaaagaagtttga 452

                                           
Query: 536 tgatgagatgcgtaacgattactggggatact 567
           ||| || || ||||| ||  ||||||||||||
Sbjct: 453 tgacgaaatccgtaatgacaactggggatact 484
to top
>emb|BX822199.1|CNS0A5TC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB1ZA08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 777

 Score =  111 bits (56), Expect = 3e-21
 Identities = 218/272 (80%)
 Strand = Plus / Plus

                                                                       
Query: 296 gtacaaggaggcttatgatagcattgagatcccgaagtatgttgacactgtcactcctcg 355
           ||||||||| |||||| | |||||| |||| || ||||| |||||||  || ||||||  
Sbjct: 279 gtacaaggaagcttatcacagcattaagattccaaagtacgttgacaaagttactcctga 338

                                                                       
Query: 356 gtataagccaaagtttgatgctctgttagtcgaattgaaggaggcagagaagacatctct 415
            || |||||||||||||||||| |||| || ||| |||| || |||||  ||| ||| ||
Sbjct: 339 atacaagccaaagtttgatgctttgttggtggaactgaaagaagcagaacagaaatcgct 398

                                                                       
Query: 416 gaaggaatcagagaggatagagaaggagattgctgaaatgaaggagatgaagaaaaagat 475
            ||||| || ||  || | ||||| || ||||||||  |  | ||||| |  |||||| |
Sbjct: 399 caaggagtctgaacggttggagaaagaaattgctgatgtccaagagatcagcaaaaagct 458

                                                                       
Query: 476 cagcacaatgacagcagacgagtactttgcgaagcaccctgaactcaagaagaagtttga 535
           |||||| ||||| ||||| |||||||||| ||||||||| |||||||| |||||||||||
Sbjct: 459 cagcaccatgactgcagatgagtactttgagaagcacccggaactcaaaaagaagtttga 518

                                           
Query: 536 tgatgagatgcgtaacgattactggggatact 567
           ||| || || ||||| ||  ||||||||||||
Sbjct: 519 tgacgaaatccgtaatgacaactggggatact 550
to top
>emb|AL132972.1|ATT25B15 Arabidopsis thaliana DNA chromosome 3, BAC clone T25B15
          Length = 77350

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 89/102 (87%)
 Strand = Plus / Plus

                                                                         
Query: 466   agaaaaagatcagcacaatgacagcagacgagtactttgcgaagcaccctgaactcaaga 525
             |||||||| ||||||| ||||| ||||| |||||||||| ||||||||| |||||||| |
Sbjct: 51527 agaaaaagctcagcaccatgactgcagatgagtactttgagaagcacccggaactcaaaa 51586

                                                       
Query: 526   agaagtttgatgatgagatgcgtaacgattactggggatact 567
             ||||||||||||| || || ||||| ||  ||||||||||||
Sbjct: 51587 agaagtttgatgacgaaatccgtaatgacaactggggatact 51628



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                         
Query: 316   gcattgagatcccgaagtatgttgacactgtcactcctcggtataagccaaagtttgatg 375
             |||||||||| || ||||| |||||||  || ||||||   || ||||||||||||||||
Sbjct: 51163 gcattgagattccaaagtacgttgacaaagttactcctgaatacaagccaaagtttgatg 51222

               
Query: 376   ct 377
             ||
Sbjct: 51223 ct 51224
to top
>ref|NM_001035768.1| Arabidopsis thaliana unknown protein AT3G52300 transcript variant
           AT3G52300.2 mRNA, complete cds
          Length = 893

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 87/100 (87%)
 Strand = Plus / Plus

                                                                       
Query: 468 aaaaagatcagcacaatgacagcagacgagtactttgcgaagcaccctgaactcaagaag 527
           |||||| ||||||| ||||| ||||| |||||||||| ||||||||| |||||||| |||
Sbjct: 534 aaaaagctcagcaccatgactgcagatgagtactttgagaagcacccggaactcaaaaag 593

                                                   
Query: 528 aagtttgatgatgagatgcgtaacgattactggggatact 567
           ||||||||||| || || ||||| ||  ||||||||||||
Sbjct: 594 aagtttgatgacgaaatccgtaatgacaactggggatact 633



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 70/82 (85%)
 Strand = Plus / Plus

                                                                       
Query: 296 gtacaaggaggcttatgatagcattgagatcccgaagtatgttgacactgtcactcctcg 355
           ||||||||| |||||||| ||||||||||| || ||||| |||||||  || ||||||  
Sbjct: 358 gtacaaggaagcttatgacagcattgagattccaaagtacgttgacaaagttactcctga 417

                                 
Query: 356 gtataagccaaagtttgatgct 377
            || ||||||||||||||||||
Sbjct: 418 atacaagccaaagtttgatgct 439
to top
>emb|BX823132.1|CNS0A5WR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB92ZD08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 774

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 216/272 (79%)
 Strand = Plus / Plus

                                                                       
Query: 296 gtacaaggaggcttatgatagcattgagatcccgaagtatgttgacactgtcactcctcg 355
           ||||||||| |||||||| |||||| |||| || ||||| |||||||  |||||||||  
Sbjct: 274 gtacaaggacgcttatgacagcattaagattccaaagtacgttgacaaagtcactcctga 333

                                                                       
Query: 356 gtataagccaaagtttgatgctctgttagtcgaattgaaggaggcagagaagacatctct 415
            || |||||||||||||||||| |||| || ||| |||| || |||||  ||| ||| ||
Sbjct: 334 atacaagccaaagtttgatgctttgttggtggaactgaaagaagcagaacagaaatcgct 393

                                                                       
Query: 416 gaaggaatcagagaggatagagaaggagattgctgaaatgaaggagatgaagaaaaagat 475
            ||||| |  ||  || | ||||| || ||||||||  |  | ||||| |  |||||| |
Sbjct: 394 caaggagtatgaacggttggagaaagaaattgctgatgtccaagagatcagcaaaaagtt 453

                                                                       
Query: 476 cagcacaatgacagcagacgagtactttgcgaagcaccctgaactcaagaagaagtttga 535
           |||||| ||||| | ||| |||||||||| |||| |||| | |||||| |||||||||||
Sbjct: 454 cagcaccatgactgtagatgagtactttgagaagaacccggtactcaaaaagaagtttga 513

                                           
Query: 536 tgatgagatgcgtaacgattactggggatact 567
           ||| || || ||||| ||  ||||||||||||
Sbjct: 514 tgacgaaatccgtaatgacaactggggatact 545
to top
>emb|AJ843973.1| Plantago major mRNA for mitochondrial F0 ATP synthase delta chain
           (atp5 gene)
          Length = 803

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 123/149 (82%)
 Strand = Plus / Plus

                                                                       
Query: 117 atcgactgggacggcatggcgaagatgctcgtctccgaggaggcccggaaggagttcgcc 176
           ||||| ||||| |||||||| ||| | ||||||||||| ||||| || |||||||||  |
Sbjct: 131 atcgattgggaaggcatggccaaggttctcgtctccgatgaggctcgcaaggagttcttc 190

                                                                       
Query: 177 aacctccgccgcaccttcgaggacgtcaaccaccagctccagaccaagttctcccaggaa 236
             |||||||||| ||||||| || ||||||  ||||||||||||||| |||   ||||||
Sbjct: 191 gccctccgccgcgccttcgacgatgtcaacacccagctccagaccaaattcagtcaggaa 250

                                        
Query: 237 ccacagccaattgactgggaatactacag 265
           |||   || ||||||||||| ||||||||
Sbjct: 251 ccagtacccattgactgggagtactacag 279



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 63/76 (82%)
 Strand = Plus / Plus

                                                                       
Query: 463 tgaagaaaaagatcagcacaatgacagcagacgagtactttgcgaagcaccctgaactca 522
           ||||||| ||| | ||||| |||||||| ||||||||||| || ||||| |||||  |||
Sbjct: 477 tgaagaacaaggttagcaccatgacagctgacgagtacttcgccaagcatcctgaggtca 536

                           
Query: 523 agaagaagtttgatga 538
           || |||| || |||||
Sbjct: 537 aggagaaattcgatga 552
to top
>gb|BT013973.1| Lycopersicon esculentum clone 133018R, mRNA sequence
          Length = 860

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 217/275 (78%)
 Strand = Plus / Plus

                                                                       
Query: 294 atgtacaaggaggcttatgatagcattgagatcccgaagtatgttgacactgtcactcct 353
           |||||||| || || ||||| |||||||||||||| |||| ||  ||||| || ||||||
Sbjct: 293 atgtacaaagaagcctatgaaagcattgagatccccaagtttgaggacacagttactcct 352

                                                                       
Query: 354 cggtataagccaaagtttgatgctctgttagtcgaattgaaggaggcagagaagacatct 413
           |  || || || |||||||||||| |||| || ||| |||| || || ||||||  ||||
Sbjct: 353 caatacaaacccaagtttgatgctttgttggtggaactgaaagaagctgagaagcaatct 412

                                                                       
Query: 414 ctgaaggaatcagagaggatagagaaggagattgctgaaatgaaggagatgaagaaaaag 473
           || ||||| || || ||  |||| |||||  |||| ||  |  | ||| |||||||||| 
Sbjct: 413 ctcaaggagtctgaaagattagaaaaggaagttgccgaggtccaagagttgaagaaaaaa 472

                                                                       
Query: 474 atcagcacaatgacagcagacgagtactttgcgaagcaccctgaactcaagaagaagttt 533
            |||| || ||||||||||| || |||||||| ||||| || ||  | |||||||| |||
Sbjct: 473 ctcagtaccatgacagcagaagaatactttgcaaagcatcccgagttaaagaagaaattt 532

                                              
Query: 534 gatgatgagatgcgtaacgattactggggatacta 568
           |||||||| || || ||||| |||||||| |||||
Sbjct: 533 gatgatgaaattcgaaacgactactggggctacta 567
to top
>emb|BX822317.1|CNS0A5WN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB28ZF01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 755

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 85/100 (85%)
 Strand = Plus / Plus

                                                                       
Query: 468 aaaaagatcagcacaatgacagcagacgagtactttgcgaagcaccctgaactcaagaag 527
           |||||| ||||||| ||||| | |||  ||||||||| ||||||||| |||||||| |||
Sbjct: 463 aaaaagctcagcaccatgactgaagataagtactttgagaagcacccggaactcaaaaag 522

                                                   
Query: 528 aagtttgatgatgagatgcgtaacgattactggggatact 567
           ||||||||||| || || ||||| ||  ||||||||||||
Sbjct: 523 aagtttgatgacgaaatccgtaatgacaactggggatact 562



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Plus

                                                                       
Query: 296 gtacaaggaggcttatgatagcattgagatcccgaagtatgttgacactgtcactcctcg 355
           ||||||||| |||||||| |||||| ||||  | ||||| |||||||  |||||||||  
Sbjct: 291 gtacaaggaagcttatgacagcatttagatttcaaagtacgttgacaaagtcactcctga 350

                                      
Query: 356 gtataagccaaagtttgatgctctgtt 382
            || |||||||||||||||||| ||||
Sbjct: 351 atacaagccaaagtttgatgctttgtt 377
to top
>gb|AC144484.5| Medicago truncatula clone mth2-30o16, complete sequence
          Length = 121144

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 69/80 (86%)
 Strand = Plus / Plus

                                                                         
Query: 483   atgacagcagacgagtactttgcgaagcaccctgaactcaagaagaagtttgatgatgag 542
             ||||||||||| |||||||||||  |||| ||||| || |||||||| ||||||||||||
Sbjct: 95192 atgacagcagatgagtactttgccgagcatcctgagctaaagaagaaatttgatgatgag 95251

                                 
Query: 543   atgcgtaacgattactgggg 562
             ||  | |||||| |||||||
Sbjct: 95252 attaggaacgataactgggg 95271



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                         
Query: 316   gcattgagatcccgaagtatgttgacactgtcactcctcggtataagccaaagtttgatg 375
             ||||||||||||| |||| ||||||||| || |||||||  |||||||| || |||||||
Sbjct: 94857 gcattgagatccccaagtttgttgacacagtaactcctcaatataagcctaaatttgatg 94916

              
Query: 376   c 376
             |
Sbjct: 94917 c 94917



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                   
Query: 101   caaggccgggaaggcgatcgactgggacggcatggcgaagatgctcgtctccga 154
             |||||||||||||  |||||| |||||||| ||||| ||| | |||||| ||||
Sbjct: 92145 caaggccgggaagaagatcgattgggacgggatggctaagcttctcgtcaccga 92198
to top
>gb|AC152818.17| Medicago truncatula clone mth2-85g12, complete sequence
          Length = 142154

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 69/80 (86%)
 Strand = Plus / Plus

                                                                         
Query: 483   atgacagcagacgagtactttgcgaagcaccctgaactcaagaagaagtttgatgatgag 542
             ||||||||||| |||||||||||  |||| ||||| || |||||||| ||||||||||||
Sbjct: 95196 atgacagcagatgagtactttgccgagcatcctgagctaaagaagaaatttgatgatgag 95255

                                 
Query: 543   atgcgtaacgattactgggg 562
             ||  | |||||| |||||||
Sbjct: 95256 attaggaacgataactgggg 95275



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                         
Query: 316   gcattgagatcccgaagtatgttgacactgtcactcctcggtataagccaaagtttgatg 375
             ||||||||||||| |||| ||||||||| || |||||||  |||||||| || |||||||
Sbjct: 94861 gcattgagatccccaagtttgttgacacagtaactcctcaatataagcctaaatttgatg 94920

              
Query: 376   c 376
             |
Sbjct: 94921 c 94921



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                   
Query: 101   caaggccgggaaggcgatcgactgggacggcatggcgaagatgctcgtctccga 154
             |||||||||||||  |||||| |||||||| ||||| ||| | |||||| ||||
Sbjct: 92149 caaggccgggaagaagatcgattgggacgggatggctaagcttctcgtcaccga 92202
to top
>gb|AC142210.1| Solanum demissum chromosome 11 BAC PGEC589 genomic sequence, complete
             sequence
          Length = 91755

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 84/103 (81%)
 Strand = Plus / Plus

                                                                         
Query: 466   agaaaaagatcagcacaatgacagcagacgagtactttgcgaagcaccctgaactcaaga 525
             |||||||  |||| || ||||||||||| || |||||||| ||||| || ||  | ||||
Sbjct: 61714 agaaaaaactcagtaccatgacagcagaagaatactttgcaaagcatcccgagttaaaga 61773

                                                        
Query: 526   agaagtttgatgatgagatgcgtaacgattactggggatacta 568
             |||| ||||||||||| || || || || |||||||| |||||
Sbjct: 61774 agaaatttgatgatgaaattcgaaatgactactggggctacta 61816
to top
>emb|X80765.1|PPPHEHYD P.putida genes for phenolhydroxylase
          Length = 6343

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 184  gccgcaccttcgaggacgtcaacc 207
            ||||||||||||||||||||||||
Sbjct: 6264 gccgcaccttcgaggacgtcaacc 6287
to top
>emb|X52805.1|PPDMPCD Pseudomonas putida dmpC and dmpD genes for 2-hydroxymuconic
           semialdehyde dehydrogenase and 2-hydroxymuconic
           semialdehyde hydrolase
          Length = 2493

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 184 gccgcaccttcgaggacgtcaacc 207
           ||||||||||||||||||||||||
Sbjct: 153 gccgcaccttcgaggacgtcaacc 176
to top
>dbj|D83057.1| Pseudomonas aeruginosa DNA for catechol 2,3-dioxygenase, complete cds
          Length = 1260

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 184  gccgcaccttcgaggacgtcaacc 207
            ||||||||||||||||||||||||
Sbjct: 1055 gccgcaccttcgaggacgtcaacc 1078
to top
>gb|AC022016.7| Homo sapiens chromosome 10 clone RP11-165M8, complete sequence
          Length = 163031

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 216   cagaccaagttctcccaggaacc 238
             |||||||||||||||||||||||
Sbjct: 62345 cagaccaagttctcccaggaacc 62367
to top
>ref|NG_004788.1| Homo sapiens cofilin pseudogene 1 (CFLP1) on chromosome 10
          Length = 26979

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 216   cagaccaagttctcccaggaacc 238
             |||||||||||||||||||||||
Sbjct: 26311 cagaccaagttctcccaggaacc 26333
to top
>gb|AC024226.11|AC024226 Genomic Sequence For Arabidopsis thaliana Clone T32B03 From Chromosome
             V, complete sequence
          Length = 96262

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                        
Query: 316   gcattgagatcccgaagtatgttgacactgtcactcctcggtataagccaaagtttgat 374
             |||||||||| || ||||| ||||||||||||| |||    || |||||||||||||||
Sbjct: 47062 gcattgagattcctaagtacgttgacactgtcattccgaaatacaagccaaagtttgat 47004
to top
>gb|BC031631.1| Homo sapiens cofilin pseudogene 1, mRNA (cDNA clone IMAGE:5168640)
          Length = 2163

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 216  cagaccaagttctcccaggaacc 238
            |||||||||||||||||||||||
Sbjct: 1031 cagaccaagttctcccaggaacc 1053
to top
>dbj|AB046441.1| Arabidopsis thaliana DNA, chromosome 5 centromere region, clone:T15D5
          Length = 75370

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                        
Query: 316   gcattgagatcccgaagtatgttgacactgtcactcctcggtataagccaaagtttgat 374
             |||||||||| || ||||| ||||||||||||| |||    || |||||||||||||||
Sbjct: 66234 gcattgagattcctaagtacgttgacactgtcattccgaaatacaagccaaagtttgat 66292
to top
>gb|AF067844.1|AF067844 Homo sapiens chromosome 10 clone PTEN, complete sequence
          Length = 218336

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 216  cagaccaagttctcccaggaacc 238
            |||||||||||||||||||||||
Sbjct: 3383 cagaccaagttctcccaggaacc 3405
to top
>gb|AC145944.3| Gallus gallus chromosome UNK clone CH261-22N7, complete sequence
          Length = 215147

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 456   aaggagatgaagaaaaagatca 477
             ||||||||||||||||||||||
Sbjct: 85168 aaggagatgaagaaaaagatca 85147
to top
>ref|NM_112685.3| Arabidopsis thaliana HON4; DNA binding AT3G18035 (HON4) mRNA,
            complete cds
          Length = 1903

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 516  gaactcaagaagaagtttgat 536
            |||||||||||||||||||||
Sbjct: 1298 gaactcaagaagaagtttgat 1318
to top
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 68     gagcggggtgaagaaggtggcggac 92
              ||||| |||||||||||||||||||
Sbjct: 999780 gagcgcggtgaagaaggtggcggac 999804
to top
>gb|BT006606.1| Arabidopsis thaliana At3g18035 mRNA, complete cds
          Length = 1443

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 516  gaactcaagaagaagtttgat 536
            |||||||||||||||||||||
Sbjct: 1132 gaactcaagaagaagtttgat 1152
to top
>emb|BX823749.1|CNS0A6I9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS72ZA08 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1664

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 516  gaactcaagaagaagtttgat 536
            |||||||||||||||||||||
Sbjct: 1278 gaactcaagaagaagtttgat 1298
to top
>gb|BT002434.1| Arabidopsis thaliana linker histone protein, putative (At3g18035)
            mRNA, complete cds
          Length = 1752

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 516  gaactcaagaagaagtttgat 536
            |||||||||||||||||||||
Sbjct: 1302 gaactcaagaagaagtttgat 1322
to top
>dbj|AB026641.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MBG14
          Length = 6588

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 516  gaactcaagaagaagtttgat 536
            |||||||||||||||||||||
Sbjct: 5384 gaactcaagaagaagtttgat 5364
to top
>gb|AC147219.5| Mus musculus BAC clone RP23-37K18 from 18, complete sequence
          Length = 183177

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 418   aggaatcagagaggatagaga 438
             |||||||||||||||||||||
Sbjct: 80979 aggaatcagagaggatagaga 80999
to top
>gb|AC155253.1| Mus musculus BAC clone RP24-172G9 from 17, complete sequence
          Length = 160193

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 409    catctctgaaggaatcagaga 429
              |||||||||||||||||||||
Sbjct: 100904 catctctgaaggaatcagaga 100924
to top
>gb|AC174800.2| Mus musculus BAC clone CH36-125B10 from chromosome 17, complete sequence
          Length = 178741

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 409    catctctgaaggaatcagaga 429
              |||||||||||||||||||||
Sbjct: 130328 catctctgaaggaatcagaga 130348
to top
>emb|CT030652.14| Mouse DNA sequence from clone RP23-48G20 on chromosome 17, complete
             sequence
          Length = 221351

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 409   catctctgaaggaatcagaga 429
             |||||||||||||||||||||
Sbjct: 42653 catctctgaaggaatcagaga 42673
to top
>gb|AF491307.2| Pseudomonas putida NCIB 9816-4 plasmid pDTG1, complete sequence
          Length = 83042

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 184   gccgcaccttcgaggacgtcaacc 207
             ||||||||||||||||| ||||||
Sbjct: 47604 gccgcaccttcgaggacatcaacc 47581
to top
>gb|AY208917.2| Pseudomonas sp. ND6 plasmid pND6-1, complete sequence
          Length = 101858

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 184   gccgcaccttcgaggacgtcaacc 207
             ||||||||||||||||| ||||||
Sbjct: 87409 gccgcaccttcgaggacatcaacc 87386
to top
>ref|XM_428367.1| PREDICTED: Gallus gallus similar to chromosome 18 open reading
           frame 30 (LOC430817), partial mRNA
          Length = 692

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 450 gaaatgaaggagatgaagaaaaag 473
           ||||||||| ||||||||||||||
Sbjct: 101 gaaatgaagaagatgaagaaaaag 124
to top
>gb|AY294313.1| Pseudomonas putida NahR (nahR), complete cds; and salicylate
            degradation gene cluster, complete sequence
          Length = 11911

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 184  gccgcaccttcgaggacgtcaacc 207
            ||||||||||||||||| ||||||
Sbjct: 4464 gccgcaccttcgaggacatcaacc 4487
to top
>gb|AC093598.4| Homo sapiens BAC clone RP11-262F18 from 7, complete sequence
          Length = 50840

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 317   cattgagatcccgaagtatgttga 340
             ||||||||||| ||||||||||||
Sbjct: 36896 cattgagatccagaagtatgttga 36873
to top
>emb|CR848308.2| Xenopus tropicalis finished cDNA, clone TNeu048i23
          Length = 1824

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 388  aattgaaggaggcagagaag 407
            ||||||||||||||||||||
Sbjct: 992  aattgaaggaggcagagaag 1011
to top
>emb|BX530407.26| Zebrafish DNA sequence from clone DKEY-83M22 in linkage group 9,
             complete sequence
          Length = 292409

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 524   gaagaagtttgatgatgaga 543
             ||||||||||||||||||||
Sbjct: 54656 gaagaagtttgatgatgaga 54675
to top
>gb|AC145331.19| Medicago truncatula clone mth2-8o7, complete sequence
          Length = 115348

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 449    tgaaatgaaggagatgaaga 468
              ||||||||||||||||||||
Sbjct: 104244 tgaaatgaaggagatgaaga 104263
to top
>emb|AL163300.2|HS21C100 Homo sapiens chromosome 21 segment HS21C100
          Length = 340000

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 451   aaatgaaggagatgaagaaaaaga 474
             |||||||||||| |||||||||||
Sbjct: 45734 aaatgaaggagaggaagaaaaaga 45757
to top
>gb|AC148398.10| Medicago truncatula clone mth2-24c23, complete sequence
          Length = 123656

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 451   aaatgaaggagatgaagaaa 470
             ||||||||||||||||||||
Sbjct: 80363 aaatgaaggagatgaagaaa 80382
to top
>emb|AL035691.17|HS249F5 Human DNA sequence from clone RP1-249F5 on chromosome 6q26-27 Contains a
              novel gene, the MAS1 oncogene, the 5' end of the IGF2R gene
              for insulin-like growth factor 2 receptor
              (cation-independent mannose-6 phosphate receptor,
              Insulin-like growth factor-2 receptor (mannose-6-phosphate
              receptor, cation-independent)) (MPRI, CD222, CIMPR, M6P-R)
              and two CpG islands, complete sequence
          Length = 129968

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 409    catctctgaaggaatcagag 428
              ||||||||||||||||||||
Sbjct: 122084 catctctgaaggaatcagag 122103
to top
>emb|AL109810.13|HS1097F14 Human DNA sequence from clone RP5-1097F14 on chromosome 1q42.13-43
             Contains a peptidylprolyl isomerase A (cyclophilin A)
             pseudogene (PPIA), the gene for a novel protein similar to
             tripartite motif-containing 9 (TRIM9), a novel gene and
             three CpG islands, complete sequence
          Length = 123657

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 425   agagaggatagagaaggaga 444
             ||||||||||||||||||||
Sbjct: 76916 agagaggatagagaaggaga 76897
to top
>emb|AL049651.2|HSJ753D10 Human DNA sequence from clone RP4-753D10 on chromosome 20 Contains the
             SSTR4 gene for somatostatin receptor 4, the THBD gene for
             thrombomodulin, two novel genes and two CpG islands,
             complete sequence
          Length = 97912

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 449   tgaaatgaaggagatgaagaaaaa 472
             |||||||||||| |||||||||||
Sbjct: 13955 tgaaatgaaggaaatgaagaaaaa 13932
to top
>emb|X60740.1|PAXYLEJI1 Pseudomonas aeruginosa xylEJI104-1 gene for catechol 2,3-dioxygenase
          Length = 1247

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 184  gccgcaccttcgaggacgtcaacc 207
            ||||||||||||||||| ||||||
Sbjct: 1042 gccgcaccttcgaggacatcaacc 1065
to top
>emb|AJ544930.2|UBA544930 Pseudomonas sp. 1YdBTEX2 C23O gene for catechol 2,3 dioxygenase,
            strain 1YdBTEX2
          Length = 1556

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 184  gccgcaccttcgaggacgtcaacc 207
            ||||||||||||||||| ||||||
Sbjct: 1118 gccgcaccttcgaggacatcaacc 1141
to top
>emb|AJ544924.2|UBA544924 Pseudomonas sp. 1YB2 C23O gene for catechol 2,3 dioxygenase, strain
            1YB2
          Length = 1556

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 184  gccgcaccttcgaggacgtcaacc 207
            ||||||||||||||||| ||||||
Sbjct: 1118 gccgcaccttcgaggacatcaacc 1141
to top
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 352     ctcggtataagccaaagttt 371
               ||||||||||||||||||||
Sbjct: 5280886 ctcggtataagccaaagttt 5280867
to top
>emb|BX901878.6| Zebrafish DNA sequence from clone DKEY-11O15 in linkage group 21,
             complete sequence
          Length = 217310

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 278   atcaaaagttgtggatatgt 297
             ||||||||||||||||||||
Sbjct: 33728 atcaaaagttgtggatatgt 33747
to top
>emb|AL954250.1| Pan troglodytes chromosome 22 clone RP43-013I15 map 22q22.3, complete
             sequence
          Length = 192447

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 451   aaatgaaggagatgaagaaaaaga 474
             |||||||||||| |||||||||||
Sbjct: 83015 aaatgaaggagaggaagaaaaaga 83038
to top
>emb|AL954249.1| Pan troglodytes chromosome 22 clone PTB-105M10 map 22q22.3, complete
              sequence
          Length = 182974

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 451    aaatgaaggagatgaagaaaaaga 474
              |||||||||||| |||||||||||
Sbjct: 136410 aaatgaaggagaggaagaaaaaga 136433
to top
>emb|BX284112.25| Zebrafish DNA sequence from clone DKEYP-75A7 in linkage group 21,
              complete sequence
          Length = 216476

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 278    atcaaaagttgtggatatgt 297
              ||||||||||||||||||||
Sbjct: 152208 atcaaaagttgtggatatgt 152189
to top
>gb|AF525494.1| Pseudomonas fluorescens plasmid pLP6a catechol-2,3-dioxygenase
           (nahH) gene, partial cds; 2-hydroxymuconic semialdehyde
           dehydrogenase (nahI), 2-hydroxymuconic semialdehyde
           hydrolase (nahN), 2-oxypent-4-enoate hydratase (nahL),
           acetaldehyde dehydrogenase (nahO),
           4-hydroxy-2-oxovalerate aldolase (nahM), 4-oxalcrotonate
           decarboxylase (nahK), and 4-oxalocrotonate tautomerase
           (nahJ) genes, complete cds; and methyl-accepting
           chemotaxis protein (nahY) gene, partial cds
          Length = 7152

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 184 gccgcaccttcgaggacgtcaacc 207
           ||||||||||||||||| ||||||
Sbjct: 436 gccgcaccttcgaggacatcaacc 459
to top
>ref|XM_700803.1| PREDICTED: Danio rerio hypothetical protein LOC561174 (LOC561174),
           mRNA
          Length = 778

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 524 gaagaagtttgatgatgaga 543
           ||||||||||||||||||||
Sbjct: 595 gaagaagtttgatgatgaga 614
to top
>emb|BX649522.15| Zebrafish DNA sequence from clone DKEY-40I22 in linkage group 2, complete
              sequence
          Length = 155396

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 413    tctgaaggaatcagagagga 432
              ||||||||||||||||||||
Sbjct: 150086 tctgaaggaatcagagagga 150067
to top
>ref|XM_691529.1| PREDICTED: Danio rerio similar to Dual specificity testis-specific
            protein kinase 2 (Testicular protein kinase 2)
            (LOC568213), mRNA
          Length = 2022

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 413  tctgaaggaatcagagagga 432
            ||||||||||||||||||||
Sbjct: 1766 tctgaaggaatcagagagga 1747
to top
>gb|AC090958.3| Homo sapiens chromosome 3 clone RP11-758G22 map 3p, complete sequence
          Length = 193333

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 294    atgtacaaggaggcttatgatagcattg 321
              ||||||||||| ||| ||||||||||||
Sbjct: 136475 atgtacaaggatgctcatgatagcattg 136502
to top
>gb|U01825.1|PSU01825 Pseudomonas sp. IC catechol 2,3-dioxygenase (bphE) gene, complete
            cds, and 2-hydroxymuconic semialdehyde dehydrogenase
            (bphG) gene, partial cds
          Length = 1241

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 184  gccgcaccttcgaggacgtcaacc 207
            ||||||||||||||||| ||||||
Sbjct: 1041 gccgcaccttcgaggacatcaacc 1064
to top
>gb|AY228547.1| Pseudomonas sp. A2YC1 catechol 2,3-dioxygenase (c23o) gene, complete
            cds; and 2-hydroxymuconic semialdehyde dehydrogenase
            (hmsD) gene, partial cds
          Length = 1498

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 184  gccgcaccttcgaggacgtcaacc 207
            ||||||||||||||||| ||||||
Sbjct: 1092 gccgcaccttcgaggacatcaacc 1115
to top
>gb|AF478380.1| Vitis vinifera isolate 1R1 copia-like retrotransposon gag-pol
           polyprotein-like gene, partial sequence
          Length = 1348

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 471 aagatcagcacaatgacagcagacgagt 498
           ||||||| ||||||||||||||| ||||
Sbjct: 625 aagatcatcacaatgacagcagaagagt 652
to top
>emb|AJ582631.1|PST582631 Pseudomonas stutzeri nahT gene, partial nahH gene, ORF1, tnpA gene,
            partial nahH gene and partial nahI gene, strain AN142
          Length = 4072

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 184  gccgcaccttcgaggacgtcaacc 207
            ||||||||||||||||| ||||||
Sbjct: 3867 gccgcaccttcgaggacatcaacc 3890
to top
>emb|AL773536.21| Mouse DNA sequence from clone RP23-186J20 on chromosome 2, complete
              sequence
          Length = 161244

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 423    tcagagaggatagagaagga 442
              ||||||||||||||||||||
Sbjct: 153375 tcagagaggatagagaagga 153394
to top
>gb|AF039534.1|AF039534 Pseuodmonas stutzeri transposase-like protein TnpA3 (tnpA3),
            salicylate hydroxylase (nahW), transposase-like protein
            (tnpA2) and regulatory protein (nahR) genes; and
            naphthalene degradation lower-pathway gene cluster (nahG,
            nahT, nahH, nahI, nahN, nahL, nahO, nahM, nahK, and
            nahJ), complete cds
          Length = 15923

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 184  gccgcaccttcgaggacgtcaacc 207
            ||||||||||||||||| ||||||
Sbjct: 8476 gccgcaccttcgaggacatcaacc 8499
to top
>dbj|AP006274.1| Papio hamadryas genomic DNA, BAC clone: RPCI41-217F13, chromosome 3,
             complete sequence
          Length = 178968

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 451   aaatgaaggagatgaagaaaaaga 474
             |||||||||||| |||||||||||
Sbjct: 66425 aaatgaaggagaggaagaaaaaga 66448
to top
>dbj|AP006273.1| Papio hamadryas genomic DNA, BAC clone: RPCI41-30J10, chromosome 3,
              complete sequence
          Length = 183435

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 451    aaatgaaggagatgaagaaaaaga 474
              |||||||||||| |||||||||||
Sbjct: 161547 aaatgaaggagaggaagaaaaaga 161570
to top
>dbj|AP006272.1| Pan troglodytes genomic DNA, BAC clone: RPCI43-100O24, chromosome 22,
              complete sequence
          Length = 175178

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 451    aaatgaaggagatgaagaaaaaga 474
              |||||||||||| |||||||||||
Sbjct: 105717 aaatgaaggagaggaagaaaaaga 105740
to top
>emb|AL049781.5|CNS00003 Human chromosome 14 DNA sequence BAC R-340L3 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 188165

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 456   aaggagatgaagaaaaagat 475
             ||||||||||||||||||||
Sbjct: 87794 aaggagatgaagaaaaagat 87813
to top
>emb|AL773602.1|HS314N7 Homo sapiens chromosome 21 from PAC RP1-314N7, map 21q22.3
          Length = 121590

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 451    aaatgaaggagatgaagaaaaaga 474
              |||||||||||| |||||||||||
Sbjct: 103910 aaatgaaggagaggaagaaaaaga 103933
to top
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 145     tcgtctccgaggaggcccggaagg 168
               |||||||||||| |||||||||||
Sbjct: 2113502 tcgtctccgaggcggcccggaagg 2113479
to top
>dbj|AP001068.1| Homo sapiens genomic DNA, chromosome 21, clone:KB877C8, MX1-D21S171
             region, complete sequence
          Length = 120832

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 451   aaatgaaggagatgaagaaaaaga 474
             |||||||||||| |||||||||||
Sbjct: 50565 aaatgaaggagaggaagaaaaaga 50588
to top
>dbj|AB001722.1| Pseudomonas stutzeri carbazole catabolic genes, complete cds,
            clone:pPS110
          Length = 3072

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 184  gccgcaccttcgaggacgtcaacc 207
            ||||||||||||||||| ||||||
Sbjct: 1387 gccgcaccttcgaggacatcaacc 1410


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,128,381
Number of Sequences: 3902068
Number of extensions: 5128381
Number of successful extensions: 118065
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 117794
Number of HSP's gapped (non-prelim): 266
length of query: 575
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 552
effective length of database: 17,143,297,704
effective search space: 9463100332608
effective search space used: 9463100332608
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top