ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags9h18 |
|---|---|
| Clone Library Name | barley_pub |
>RL6_MESCR (P34091) 60S ribosomal protein L6 (YL16-like)| Length = 234 Score = 205 bits (522), Expect = 5e-53 Identities = 102/168 (60%), Positives = 127/168 (75%), Gaps = 5/168 (2%) Frame = +1 Query: 13 KMALGIKRTSRSRTYHRRGLWAIKAKHGGXXXXXXXXXXXXXXXX-----YPADDVKPRT 177 ++ GI + SRS+ YH+RGLWAIKAK+GG YPADDVK Sbjct: 16 ELVRGIGKYSRSKMYHKRGLWAIKAKNGGVFPKHAPKSADSKAVEKPPKFYPADDVKKPL 75 Query: 178 FSTRKPHPTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPIRRV 357 + RKP PTKLR++ITPGTVLI+LAGR+ GKRVVFLKQL SGLLL+TGPFK+NGVP+RRV Sbjct: 76 INKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGPFKVNGVPLRRV 135 Query: 358 NQAYVISTSTRLDISKVNMQKFDDKYFAREKKTRAKKSEGELFESEKE 501 NQAYVI+TST++DIS VN++KFDDKYF ++ + + KK EGE FE+EK+ Sbjct: 136 NQAYVIATSTKVDISGVNVEKFDDKYFGKKAEKKNKKGEGEFFEAEKK 183
>RL6B_YEAST (P05739) 60S ribosomal protein L6-B (L17) (YL16) (RP18)| Length = 175 Score = 134 bits (336), Expect = 2e-31 Identities = 62/117 (52%), Positives = 88/117 (75%) Frame = +1 Query: 148 YPADDVKPRTFSTRKPHPTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPF 327 YP++DV + + P KLR+++ PGTVLILLAGR+ GKRVV+LK L+ LL+TGPF Sbjct: 9 YPSEDVAAPKKTRKAVRPQKLRASLVPGTVLILLAGRFRGKRVVYLKHLEDNTLLVTGPF 68 Query: 328 KINGVPIRRVNQAYVISTSTRLDISKVNMQKFDDKYFAREKKTRAKKSEGELFESEK 498 K+NGVP+RRVN YVI+TST++ + VN++KF+ +YFA+EK T+ +K E LF ++ Sbjct: 69 KVNGVPLRRVNARYVIATSTKVSVEGVNVEKFNVEYFAKEKLTKKEKKEANLFPEQQ 125
>RL6A_YEAST (Q02326) 60S ribosomal protein L6-A (L17) (YL16) (RP18)| Length = 175 Score = 133 bits (334), Expect = 3e-31 Identities = 62/117 (52%), Positives = 88/117 (75%) Frame = +1 Query: 148 YPADDVKPRTFSTRKPHPTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPF 327 YP++DV + + P KLR+++ PGTVLILLAGR+ GKRVV+LK L+ LLI+GPF Sbjct: 9 YPSEDVAALKKTRKAARPQKLRASLVPGTVLILLAGRFRGKRVVYLKHLEDNTLLISGPF 68 Query: 328 KINGVPIRRVNQAYVISTSTRLDISKVNMQKFDDKYFAREKKTRAKKSEGELFESEK 498 K+NGVP+RRVN YVI+TST++ + VN++KF+ +YFA+EK T+ +K E LF ++ Sbjct: 69 KVNGVPLRRVNARYVIATSTKVSVEGVNVEKFNVEYFAKEKLTKKEKKEANLFPEQQ 125
>RL6_CHILA (Q6QMZ4) 60S ribosomal protein L6| Length = 287 Score = 128 bits (322), Expect = 8e-30 Identities = 67/123 (54%), Positives = 90/123 (73%), Gaps = 5/123 (4%) Frame = +1 Query: 148 YPADDVKPRTFST-RKP---HPTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLI 315 YP +DV + S +KP H KLR++ITPGTVLI+L GR+ GKRVVFLKQL SGLLL+ Sbjct: 115 YPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTVLIILTGRHRGKRVVFLKQLASGLLLV 174 Query: 316 TGPFKINGVPIRRVNQAYVISTSTRLDISKVNMQK-FDDKYFAREKKTRAKKSEGELFES 492 TGP +N VP+RR +Q +VI+TST++DIS V + K D YF ++K + + EGE+F++ Sbjct: 175 TGPLNLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFKKKKLRKPRHQEGEIFDT 234 Query: 493 EKE 501 EKE Sbjct: 235 EKE 237
>RL6_HUMAN (Q02878) 60S ribosomal protein L6 (TAX-responsive enhancer| element-binding protein 107) (TAXREB107) (Neoplasm-related protein C140) Length = 287 Score = 127 bits (319), Expect = 2e-29 Identities = 66/123 (53%), Positives = 90/123 (73%), Gaps = 5/123 (4%) Frame = +1 Query: 148 YPADDVKPRTFST-RKP---HPTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLI 315 YP +DV + S +KP H KLR++ITPGT+LI+L GR+ GKRVVFLKQL SGLLL+ Sbjct: 115 YPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLLV 174 Query: 316 TGPFKINGVPIRRVNQAYVISTSTRLDISKVNMQK-FDDKYFAREKKTRAKKSEGELFES 492 TGP +N VP+RR +Q +VI+TST++DIS V + K D YF ++K + + EGE+F++ Sbjct: 175 TGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFKKKKLRKPRHQEGEIFDT 234 Query: 493 EKE 501 EKE Sbjct: 235 EKE 237
>RL6_RAT (P21533) 60S ribosomal protein L6 (Neoplasm-related protein C140)| Length = 297 Score = 127 bits (318), Expect = 2e-29 Identities = 67/123 (54%), Positives = 90/123 (73%), Gaps = 5/123 (4%) Frame = +1 Query: 148 YPADDVKPRTFST-RKP---HPTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLI 315 YP +DV + S +KP H +LRS+ITPGTVLI+L GR+ GKRVVFLKQL SGLLL+ Sbjct: 125 YPTEDVPRKLLSHGKKPFSQHVRRLRSSITPGTVLIILTGRHRGKRVVFLKQLGSGLLLV 184 Query: 316 TGPFKINGVPIRRVNQAYVISTSTRLDISKVNMQK-FDDKYFAREKKTRAKKSEGELFES 492 TGP +N VP+RR +Q +VI+TST++DISKV + K D YF ++ + + EGE+F++ Sbjct: 185 TGPLALNRVPLRRTHQKFVIATSTKVDISKVKIPKHLTDAYFKKKPLRKPRHQEGEIFDT 244 Query: 493 EKE 501 EKE Sbjct: 245 EKE 247
>RL6_MOUSE (P47911) 60S ribosomal protein L6 (TAX-responsive enhancer| element-binding protein 107) (TAXREB107) Length = 295 Score = 126 bits (316), Expect = 4e-29 Identities = 67/123 (54%), Positives = 90/123 (73%), Gaps = 5/123 (4%) Frame = +1 Query: 148 YPADDVKPRTFST-RKP---HPTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLI 315 YP +DV + S +KP H +LRS+ITPGTVLI+L GR+ GKRVVFLKQL SGLLL+ Sbjct: 123 YPTEDVPRKLLSHGKKPFSQHVRRLRSSITPGTVLIILTGRHRGKRVVFLKQLDSGLLLV 182 Query: 316 TGPFKINGVPIRRVNQAYVISTSTRLDISKVNMQK-FDDKYFAREKKTRAKKSEGELFES 492 TGP IN VP+RR +Q +VI+TST++DIS V + K D YF +++ + + EGE+F++ Sbjct: 183 TGPLVINRVPLRRTHQKFVIATSTKVDISDVKIPKHLTDAYFKKKQLRKPRHQEGEIFDT 242 Query: 493 EKE 501 EKE Sbjct: 243 EKE 245
>RL6_PIG (Q2YGT9) 60S ribosomal protein L6| Length = 283 Score = 126 bits (316), Expect = 4e-29 Identities = 64/123 (52%), Positives = 90/123 (73%), Gaps = 5/123 (4%) Frame = +1 Query: 148 YPADDVKPRTFST-RKP---HPTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLI 315 YP +DV + S +KP H KLR++ITPGT+LI+L GR+ GKRV+FLKQL SGLLL+ Sbjct: 111 YPTEDVPRKLLSHGKKPFSKHVRKLRASITPGTILIILTGRHRGKRVIFLKQLSSGLLLV 170 Query: 316 TGPFKINGVPIRRVNQAYVISTSTRLDISKVNM-QKFDDKYFAREKKTRAKKSEGELFES 492 TGP +N VP+RR +Q +VI+TST++DIS V + + D YF ++K + + EGE+F++ Sbjct: 171 TGPLSLNRVPLRRTHQKFVIATSTKIDISGVKIPEHLTDAYFKKKKLRKPRHQEGEIFDT 230 Query: 493 EKE 501 EKE Sbjct: 231 EKE 233
>RL6_BOVIN (Q58DQ3) 60S ribosomal protein L6| Length = 286 Score = 124 bits (312), Expect = 1e-28 Identities = 64/123 (52%), Positives = 90/123 (73%), Gaps = 5/123 (4%) Frame = +1 Query: 148 YPADDVKPRTFST-RKP---HPTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLI 315 YP +DV + S +KP H KLR++ITPGT+LI+L GR+ GKRVVFLKQL SGLLL+ Sbjct: 114 YPTEDVPRKLLSHGKKPFSKHVRKLRASITPGTILIILTGRHRGKRVVFLKQLGSGLLLV 173 Query: 316 TGPFKINGVPIRRVNQAYVISTSTRLDISKVNM-QKFDDKYFAREKKTRAKKSEGELFES 492 TGP +N VP+RR +Q +VI+TST++DIS V + + D YF ++K + + EGE+F++ Sbjct: 174 TGPLSLNRVPLRRTHQKFVIATSTKIDISGVKIPEHLTDTYFKKKKLRKPRHQEGEIFDT 233 Query: 493 EKE 501 E+E Sbjct: 234 ERE 236
>RL6_SCHPO (P79071) 60S ribosomal protein L6| Length = 194 Score = 107 bits (267), Expect = 2e-23 Identities = 56/114 (49%), Positives = 79/114 (69%), Gaps = 1/114 (0%) Frame = +1 Query: 148 YPADDVKPRTFSTRKPHPTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPF 327 YPA + + PTKLR+++ PGTV ILLAGR+ GKRVV L QL+ L++TGP+ Sbjct: 27 YPAYRENVPKKARKAVRPTKLRASLAPGTVCILLAGRFRGKRVVVLSQLED-TLVVTGPY 85 Query: 328 KINGVPIRRVNQAYVISTST-RLDISKVNMQKFDDKYFAREKKTRAKKSEGELF 486 K+NGVPIRRVN YVI+TS ++D+S V+++KF YFA++K++ K + F Sbjct: 86 KVNGVPIRRVNHRYVIATSAPKIDVSGVSVEKFTKAYFAKQKRSGPVKKDEAFF 139
>RL6_CAEEL (P47991) 60S ribosomal protein L6| Length = 217 Score = 105 bits (263), Expect = 5e-23 Identities = 57/99 (57%), Positives = 78/99 (78%), Gaps = 2/99 (2%) Frame = +1 Query: 208 LRSTITPGTVLILLAGRYMGKRVVFLKQL-KSGLLLITGPFKINGVPIRRVNQAYVISTS 384 LR T+TPGTVLI+LAGR+ GKRVVFLKQL +SGLLL+TGP KING P+RR+ QA+VI+TS Sbjct: 67 LRKTLTPGTVLIVLAGRHKGKRVVFLKQLPQSGLLLVTGPHKINGFPLRRIGQAFVIATS 126 Query: 385 TRLDISKVNM-QKFDDKYFAREKKTRAKKSEGELFESEK 498 ++++S V + + +D+YF R K+ A+K+ +F S K Sbjct: 127 LKVNVSGVKIPEHINDEYFKR--KSTAQKTGKNIFASGK 163
>RL14E_SULAC (Q4JAJ9) 50S ribosomal protein L14e| Length = 96 Score = 46.2 bits (108), Expect = 5e-05 Identities = 22/59 (37%), Positives = 36/59 (61%) Frame = +1 Query: 229 GTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPIRRVNQAYVISTSTRLDISK 405 G + + GR GK+ V + + S +L+TGP +INGV RRVN ++ T +++I+K Sbjct: 7 GRICVKTRGREAGKKCVIVDIIDSNFVLVTGPKEINGVKRRRVNILHIEPTDKKVEINK 65
>RL14E_SULSO (Q980C1) 50S ribosomal protein L14e| Length = 96 Score = 44.7 bits (104), Expect = 1e-04 Identities = 29/97 (29%), Positives = 45/97 (46%) Frame = +1 Query: 220 ITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPIRRVNQAYVISTSTRLDI 399 I G + + + GR G + V + + +L+TGP I GV RRVN ++ T ++DI Sbjct: 4 IEVGRICVKVKGREAGSKCVIVDIIDDNFVLVTGPKDITGVKRRRVNILHLEPTDKKIDI 63 Query: 400 SKVNMQKFDDKYFAREKKTRAKKSEGELFESEKEATK 510 K A +++ + K E L E KE K Sbjct: 64 QK----------GASDEEVKKKLEESNLTEYMKEKIK 90
>RL14E_SULTO (Q975L7) 50S ribosomal protein L14e| Length = 96 Score = 42.7 bits (99), Expect = 6e-04 Identities = 27/94 (28%), Positives = 44/94 (46%) Frame = +1 Query: 229 GTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPIRRVNQAYVISTSTRLDISKV 408 G + + GR GK+ V + + +L+TGP +N V RRVN ++ T ++DI+K Sbjct: 7 GRICVKTRGREAGKKCVIVDIIDENFVLVTGPKDVNKVKRRRVNILHLEPTDKKIDINK- 65 Query: 409 NMQKFDDKYFAREKKTRAKKSEGELFESEKEATK 510 A + + + K E L E K+ K Sbjct: 66 ---------GASDDEVKKKLEEAGLIEFMKQDVK 90
>RL14E_PYRAE (Q8ZYB4) 50S ribosomal protein L14e| Length = 103 Score = 40.8 bits (94), Expect = 0.002 Identities = 20/59 (33%), Positives = 34/59 (57%) Frame = +1 Query: 229 GTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPIRRVNQAYVISTSTRLDISK 405 G V++ + GR G++ V + + ++ITGP I GV RRVN ++ T ++DI + Sbjct: 8 GRVVVKVLGREAGRKAVVVDIVDENYVVITGPKPITGVKRRRVNINHIEPTDKKIDIKR 66
>RL14E_AERPE (Q9YDD7) 50S ribosomal protein L14e| Length = 100 Score = 38.1 bits (87), Expect = 0.014 Identities = 18/66 (27%), Positives = 33/66 (50%) Frame = +1 Query: 208 LRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPIRRVNQAYVISTST 387 + + G + + GR G++ V + + +L+TGP + GV RRVN ++ Sbjct: 1 MAKVVEVGRICVKTRGREAGRKCVIVDIIDENFVLVTGPKSLTGVRRRRVNIDHIEILDK 60 Query: 388 RLDISK 405 ++DI K Sbjct: 61 KVDIQK 66
>RL14E_METKA (Q8TX43) 50S ribosomal protein L14e| Length = 94 Score = 37.7 bits (86), Expect = 0.018 Identities = 20/62 (32%), Positives = 32/62 (51%) Frame = +1 Query: 220 ITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPIRRVNQAYVISTSTRLDI 399 I G + + AGR GK V + + ++ITGP + GV RR N ++ T ++DI Sbjct: 5 IEVGRICVKTAGREAGKYCVVVDIVDENFVIITGPKDVTGVKRRRCNIKHLEPTPEKVDI 64 Query: 400 SK 405 + Sbjct: 65 DR 66
>RL6_ENTHI (O15595) 60S ribosomal protein L6 (Fragment)| Length = 92 Score = 37.0 bits (84), Expect = 0.031 Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 14/60 (23%) Frame = +1 Query: 148 YPADDV---KPRTFSTRKP-----------HPTKLRSTITPGTVLILLAGRYMGKRVVFL 285 YP DD+ + + TRK + KLR +I PG +LI++ G+Y GK+VV L Sbjct: 20 YPTDDMIQEQKKKLRTRKGAKITALDKPGWNLEKLRKSIVPGAILIIVGGKYAGKKVVSL 79
>RL14E_PYRFU (Q8U2L5) 50S ribosomal protein L14e| Length = 83 Score = 33.9 bits (76), Expect = 0.26 Identities = 18/62 (29%), Positives = 35/62 (56%) Frame = +1 Query: 220 ITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPIRRVNQAYVISTSTRLDI 399 I G + +++AGR G++VV + + +L+TG +N V RR+N ++ ++DI Sbjct: 4 IDVGRIAVVIAGRRAGQKVVVVDIIDKNFVLVTGA-GLNKVKRRRMNIKHIEPLPQKIDI 62 Query: 400 SK 405 + Sbjct: 63 PR 64
>RL27_RAT (P61354) 60S ribosomal protein L27| Length = 135 Score = 32.3 bits (72), Expect = 0.77 Identities = 12/26 (46%), Positives = 19/26 (73%) Frame = +1 Query: 226 PGTVLILLAGRYMGKRVVFLKQLKSG 303 PG V+++LAGRY G++ V +K + G Sbjct: 6 PGKVVLVLAGRYSGRKAVIVKNIDDG 31
>RL27_MOUSE (P61358) 60S ribosomal protein L27| Length = 135 Score = 32.3 bits (72), Expect = 0.77 Identities = 12/26 (46%), Positives = 19/26 (73%) Frame = +1 Query: 226 PGTVLILLAGRYMGKRVVFLKQLKSG 303 PG V+++LAGRY G++ V +K + G Sbjct: 6 PGKVVLVLAGRYSGRKAVIVKNIDDG 31
>RL27_HUMAN (P61353) 60S ribosomal protein L27| Length = 135 Score = 32.3 bits (72), Expect = 0.77 Identities = 12/26 (46%), Positives = 19/26 (73%) Frame = +1 Query: 226 PGTVLILLAGRYMGKRVVFLKQLKSG 303 PG V+++LAGRY G++ V +K + G Sbjct: 6 PGKVVLVLAGRYSGRKAVIVKNIDDG 31
>RL27_CHICK (P61355) 60S ribosomal protein L27| Length = 135 Score = 32.3 bits (72), Expect = 0.77 Identities = 12/26 (46%), Positives = 19/26 (73%) Frame = +1 Query: 226 PGTVLILLAGRYMGKRVVFLKQLKSG 303 PG V+++LAGRY G++ V +K + G Sbjct: 6 PGKVVLVLAGRYSGRKAVIVKNIDDG 31
>RL27_CERNI (P61357) 60S ribosomal protein L27| Length = 135 Score = 32.3 bits (72), Expect = 0.77 Identities = 12/26 (46%), Positives = 19/26 (73%) Frame = +1 Query: 226 PGTVLILLAGRYMGKRVVFLKQLKSG 303 PG V+++LAGRY G++ V +K + G Sbjct: 6 PGKVVLVLAGRYSGRKAVIVKNIDDG 31
>RL27_CANFA (Q9XSU7) 60S ribosomal protein L27| Length = 135 Score = 32.3 bits (72), Expect = 0.77 Identities = 12/26 (46%), Positives = 19/26 (73%) Frame = +1 Query: 226 PGTVLILLAGRYMGKRVVFLKQLKSG 303 PG V+++LAGRY G++ V +K + G Sbjct: 6 PGKVVLVLAGRYSGRKAVIVKNIDDG 31
>RL27_BOVIN (P61356) 60S ribosomal protein L27| Length = 135 Score = 32.3 bits (72), Expect = 0.77 Identities = 12/26 (46%), Positives = 19/26 (73%) Frame = +1 Query: 226 PGTVLILLAGRYMGKRVVFLKQLKSG 303 PG V+++LAGRY G++ V +K + G Sbjct: 6 PGKVVLVLAGRYSGRKAVIVKNIDDG 31
>RL14E_PYRKO (Q5JJE4) 50S ribosomal protein L14e| Length = 83 Score = 32.0 bits (71), Expect = 1.0 Identities = 18/62 (29%), Positives = 34/62 (54%) Frame = +1 Query: 220 ITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPIRRVNQAYVISTSTRLDI 399 I G + +++AGR G++VV + +L+TG +N V RR+N ++ R++I Sbjct: 4 IEVGRIAVVIAGRRAGQKVVVADIIDKNFVLVTGA-GLNKVKRRRMNVKHLEPLPERVNI 62 Query: 400 SK 405 + Sbjct: 63 QR 64
>RL14E_PYRHO (P59937) 50S ribosomal protein L14e| Length = 82 Score = 32.0 bits (71), Expect = 1.0 Identities = 17/62 (27%), Positives = 34/62 (54%) Frame = +1 Query: 220 ITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPIRRVNQAYVISTSTRLDI 399 I G + +++AGR G++ V + + +L+TG +N V RR+N ++ ++DI Sbjct: 4 IDVGRIAVIIAGRRAGQKCVIVDIIDKNFVLVTGA-GLNKVKRRRMNIKHLEPLPEKIDI 62 Query: 400 SK 405 + Sbjct: 63 PR 64
>RL14E_PYRAB (Q9UZJ5) 50S ribosomal protein L14e| Length = 82 Score = 32.0 bits (71), Expect = 1.0 Identities = 17/62 (27%), Positives = 34/62 (54%) Frame = +1 Query: 220 ITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPIRRVNQAYVISTSTRLDI 399 I G + +++AGR G++ V + + +L+TG +N V RR+N ++ ++DI Sbjct: 4 IDVGRIAVIIAGRRAGQKCVIVDIIDKNFVLVTGA-GLNKVKRRRMNIKHLEPLPEKIDI 62 Query: 400 SK 405 + Sbjct: 63 PR 64
>RL27_HIPCM (P61359) 60S ribosomal protein L27| Length = 135 Score = 32.0 bits (71), Expect = 1.0 Identities = 12/26 (46%), Positives = 19/26 (73%) Frame = +1 Query: 226 PGTVLILLAGRYMGKRVVFLKQLKSG 303 PG V+++LAGRY G++ V +K + G Sbjct: 6 PGKVVMVLAGRYAGRKAVIVKNIDDG 31
>RL27_BRARE (Q7ZV82) 60S ribosomal protein L27| Length = 135 Score = 32.0 bits (71), Expect = 1.0 Identities = 12/26 (46%), Positives = 19/26 (73%) Frame = +1 Query: 226 PGTVLILLAGRYMGKRVVFLKQLKSG 303 PG V+++LAGRY G++ V +K + G Sbjct: 6 PGKVVMVLAGRYAGRKAVIVKNIDDG 31
>RL17_ICTPU (Q90YU1) 60S ribosomal protein L27| Length = 135 Score = 32.0 bits (71), Expect = 1.0 Identities = 12/26 (46%), Positives = 19/26 (73%) Frame = +1 Query: 226 PGTVLILLAGRYMGKRVVFLKQLKSG 303 PG V+++LAGRY G++ V +K + G Sbjct: 6 PGKVVMVLAGRYAGRKAVIVKNIDDG 31
>V51K_BPL79 (P24125) 51.5 kDa protein| Length = 452 Score = 32.0 bits (71), Expect = 1.0 Identities = 17/45 (37%), Positives = 24/45 (53%) Frame = +1 Query: 265 GKRVVFLKQLKSGLLLITGPFKINGVPIRRVNQAYVISTSTRLDI 399 G RV+FL K + IT FK++GVP+ +V V RL + Sbjct: 25 GGRVLFLVHRKELIDQITNSFKVHGVPLNQVELLTVGKAKNRLSV 69
>EXP24_ARATH (Q9FL76) Alpha-expansin 24 precursor (AtEXPA24) (At-EXP24) (AtEx24)| (Ath-ExpAlpha-1.19) Length = 312 Score = 30.8 bits (68), Expect = 2.2 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%) Frame = +3 Query: 174 HLQHTQAPSHQAQVDH--HAGHGADPARGEVHGEARRVPQA 290 H H PSH A H H HGA P+ G + +VP + Sbjct: 48 HPAHGAHPSHGAHPSHGAHPSHGAHPSHGALPSHGGQVPHS 88
>PAHO_MOUSE (P10601) Pancreatic prohormone precursor (Pancreatic polypeptide)| (PP) [Contains: Pancreatic hormone; C-terminal peptide] Length = 100 Score = 30.4 bits (67), Expect = 2.9 Identities = 12/18 (66%), Positives = 12/18 (66%) Frame = -1 Query: 268 SPCTSPRAGSAPCPA*WS 215 SPCTSP G PC A WS Sbjct: 83 SPCTSPPVGLIPCSAPWS 100
>KNOB_PLAFN (P06719) Knob-associated histidine-rich protein precursor (KAHRP)| Length = 657 Score = 30.4 bits (67), Expect = 2.9 Identities = 20/66 (30%), Positives = 25/66 (37%), Gaps = 2/66 (3%) Frame = +3 Query: 174 HLQHTQAPSHQAQVDHHAGHGADPAR--GEVHGEARRVPQAAQVRPAPHHWTFQDQWRAN 347 H H HQ Q H A H A GEV+ +A +V Q + HH + Sbjct: 64 HHHHHHHHHHQHQAPHQAPHQAHHHHHHGEVNHQAPQVHQQVHGQDQAHHHHHHHHHHLH 123 Query: 348 PQSEPG 365 PQ G Sbjct: 124 PQQPQG 129
>RL27_CAEEL (P91914) 60S ribosomal protein L27| Length = 136 Score = 30.4 bits (67), Expect = 2.9 Identities = 14/36 (38%), Positives = 22/36 (61%) Frame = +1 Query: 226 PGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKI 333 PG V+++L G+Y G++ V +KQ G+ T P I Sbjct: 7 PGKVVLVLRGKYAGRKAVVVKQQDEGVSDRTYPHAI 42
>YLD2_CAEEL (Q03567) Hypothetical protein C38C10.2 in chromosome III| Length = 493 Score = 29.6 bits (65), Expect = 5.0 Identities = 15/26 (57%), Positives = 17/26 (65%) Frame = +1 Query: 247 LAGRYMGKRVVFLKQLKSGLLLITGP 324 LA RY GKRVVF+ L S LL + P Sbjct: 104 LASRYGGKRVVFVTILGSALLTLLNP 129
>SEPP1_HUMAN (P49908) Selenoprotein P precursor (SeP)| Length = 381 Score = 29.6 bits (65), Expect = 5.0 Identities = 25/82 (30%), Positives = 31/82 (37%), Gaps = 2/82 (2%) Frame = +3 Query: 168 ATHLQHTQAPSHQAQVDHHAGHGADPARGEVHGEARRVPQA--AQVRPAPHHWTFQDQWR 341 AT + + PS +HH HG E ++ P A A PAP Sbjct: 192 ATVDKTVETPSPHYHHEHHHNHGHQHLGSSELSENQQ-PGAPNAPTHPAP---------- 240 Query: 342 ANPQSEPGLCHFHIHKARHLQG 407 PGL H H HK +H QG Sbjct: 241 ------PGLHHHHKHKGQHRQG 256
>KNOB_PLAFG (P09346) Knob-associated histidine-rich protein precursor (KAHRP)| (KP) Length = 634 Score = 29.6 bits (65), Expect = 5.0 Identities = 19/64 (29%), Positives = 24/64 (37%) Frame = +3 Query: 174 HLQHTQAPSHQAQVDHHAGHGADPARGEVHGEARRVPQAAQVRPAPHHWTFQDQWRANPQ 353 H H HQ Q H A H GEV+ +A +V Q + HH + PQ Sbjct: 64 HHHHHHQHQHQHQAPHQAHHHHH--HGEVNHQAPQVHQQVHGQDQAHHHHHHHHHQLQPQ 121 Query: 354 SEPG 365 G Sbjct: 122 QLQG 125
>KNOB_PLAFA (P13817) Knob-associated histidine-rich protein precursor (KAHRP)| (HRPI) (Fragment) Length = 473 Score = 29.6 bits (65), Expect = 5.0 Identities = 19/64 (29%), Positives = 24/64 (37%) Frame = +3 Query: 174 HLQHTQAPSHQAQVDHHAGHGADPARGEVHGEARRVPQAAQVRPAPHHWTFQDQWRANPQ 353 H H HQ Q H A H GEV+ +A +V Q + HH + PQ Sbjct: 64 HHHHHHQHQHQHQAPHQAHHHHH--HGEVNHQAPQVHQQVHGQDQAHHHHHHHHHQLQPQ 121 Query: 354 SEPG 365 G Sbjct: 122 QLQG 125
>ELL_MOUSE (O08856) RNA polymerase II elongation factor ELL (Eleven-nineteen| lysine-rich leukemia protein) Length = 602 Score = 29.3 bits (64), Expect = 6.5 Identities = 28/93 (30%), Positives = 38/93 (40%), Gaps = 4/93 (4%) Frame = +1 Query: 166 KPRTFSTRKPHPTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVP 345 K R + T+ RS I +I GRYMGK+V F K P + VP Sbjct: 129 KARQSMAQAEEETRSRSAI-----VIKAGGRYMGKKVQFRK---------PAPGAADAVP 174 Query: 346 IRR----VNQAYVISTSTRLDISKVNMQKFDDK 432 R+ +N A I S+ S V + F D+ Sbjct: 175 SRKRATPINLASAIRKSSGSGASSVVQRPFRDR 207
>CAP4_ARATH (Q9SA65) Putative clathrin assembly protein At1g03050| Length = 599 Score = 29.3 bits (64), Expect = 6.5 Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 7/61 (11%) Frame = -2 Query: 366 SLVHSADWHAIDLERSSDEEQAGLELLEEHD-------ALPHVPPREQDQHRARRDGRPE 208 +L H+ ++ E D+++A E + E ALP PP+E+D + + + E Sbjct: 327 ALEHTKQSKSVKSEADEDDDEARTEEVNEEQEDMNAIKALPEPPPKEEDDVKPEEEAKEE 386 Query: 207 L 205 + Sbjct: 387 V 387
>RL27_YEAST (P38706) 60S ribosomal protein L27| Length = 136 Score = 29.3 bits (64), Expect = 6.5 Identities = 29/119 (24%), Positives = 48/119 (40%), Gaps = 25/119 (21%) Frame = +1 Query: 229 GTVLILLAGRYMGKRVVFLKQLKSGL-------LLITG----PFKI---NGVP------- 345 G V +++ GRY GK+VV +K G L+ G P K+ +G Sbjct: 8 GKVAVVVRGRYAGKKVVIVKPHDEGSKSHPFGHALVAGIERYPLKVTKKHGAKKVAKRTK 67 Query: 346 ----IRRVNQAYVISTSTRLDISKVNMQKFDDKYFAREKKTRAKKSEGELFESEKEATK 510 I+ VN +++ T LD+ + + ++ AKK + FE +A K Sbjct: 68 IKPFIKVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVKKAFEERHQAGK 126
>RL27_CANAL (Q9P843) 60S ribosomal protein L27| Length = 136 Score = 29.3 bits (64), Expect = 6.5 Identities = 28/122 (22%), Positives = 47/122 (38%), Gaps = 25/122 (20%) Frame = +1 Query: 220 ITPGTVLILLAGRYMGKRVVFLKQLKSGL-------LLITG----PFKINGVP------- 345 I G V I++ GRY GK+VV +K G ++ G P K+ Sbjct: 5 IKSGKVAIVVRGRYAGKKVVIVKPHDEGTKSHPFPHAIVAGIERAPLKVTKKMDAKKVTK 64 Query: 346 -------IRRVNQAYVISTSTRLDISKVNMQKFDDKYFAREKKTRAKKSEGELFESEKEA 504 ++ VN +++ T LD+ + ++ AKK + FE + +A Sbjct: 65 RTKVKPFVKLVNYNHLMPTRYSLDVESFKSAVTSEALEEPSQREEAKKVVKKAFEEKHQA 124 Query: 505 TK 510 K Sbjct: 125 GK 126
>BROWN_DROVI (Q24739) Protein brown| Length = 668 Score = 28.9 bits (63), Expect = 8.5 Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 3/87 (3%) Frame = +1 Query: 229 GTVLILLAGRYMGKRVVFL---KQLKSGLLLITGPFKINGVPIRRVNQAYVISTSTRLDI 399 G ++ +L G GK + ++L+ L TG +NG+ + R + S +I Sbjct: 56 GDLIAILGGSGAGKTTLLAAISQRLRGNL---TGDVVLNGMAMERDQMTRISSFLREFEI 112 Query: 400 SKVNMQKFDDKYFAREKKTRAKKSEGE 480 + +DD YF K + ++ E Sbjct: 113 NVKTFTAYDDLYFMSHFKMHRRTTKSE 139
>RL27_PEA (Q05462) 60S ribosomal protein L27| Length = 135 Score = 28.9 bits (63), Expect = 8.5 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +1 Query: 220 ITPGTVLILLAGRYMGKRVVFLKQLKSG 303 + P +ILL GRY GK+ V +K G Sbjct: 5 LKPNKAVILLQGRYAGKKAVIVKTFDDG 32
>GAT3_YEAST (Q07928) Protein GAT3| Length = 141 Score = 28.9 bits (63), Expect = 8.5 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = +3 Query: 264 GEARRVPQAAQVRPAPHHWTFQDQWRANPQSEPGLCH 374 G RR PQ A ++ +P QWR P E LC+ Sbjct: 67 GVTRRCPQCAVIKTSP-------QWREGPDGEVTLCN 96
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 28.9 bits (63), Expect = 8.5 Identities = 18/61 (29%), Positives = 23/61 (37%) Frame = +3 Query: 180 QHTQAPSHQAQVDHHAGHGADPARGEVHGEARRVPQAAQVRPAPHHWTFQDQWRANPQSE 359 Q P H Q HH G A P G A V + P PH ++ A+P + Sbjct: 101 QQHPPPPHMQQQQHHGGP-APPPPGGAPEHAPGVKEEYTHLPPPHPHPAYGRYHADPNMD 159 Query: 360 P 362 P Sbjct: 160 P 160
>RL27A_SCHPO (O14388) 60S ribosomal protein L27-A| Length = 136 Score = 28.9 bits (63), Expect = 8.5 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 Query: 220 ITPGTVLILLAGRYMGKRVVFLKQLKSG 303 + PG V ++ GR+ GK+VV L+ + G Sbjct: 5 LKPGKVALITRGRFAGKKVVILQAIDQG 32 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,918,409 Number of Sequences: 219361 Number of extensions: 1082858 Number of successful extensions: 4237 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 4051 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4213 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3754426130 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
