ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags9h18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY846820.1| Triticum aestivum ribosomal protein L6 mRNA, comp... 801 0.0
2ref|XM_466485.1| Oryza sativa (japonica cultivar-group), mRNA 476 e-131
3dbj|AK072777.1| Oryza sativa (japonica cultivar-group) cDNA clon... 476 e-131
4ref|XM_472843.1| Oryza sativa (japonica cultivar-group), predic... 343 3e-91
5dbj|AK067896.1| Oryza sativa (japonica cultivar-group) cDNA clon... 343 3e-91
6gb|AY103559.1| Zea mays PCO112591 mRNA sequence 246 6e-62
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 198 1e-47
8dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic D... 198 1e-47
9dbj|AP005640.2| Oryza sativa (japonica cultivar-group) genomic D... 198 1e-47
10emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4,... 145 2e-31
11dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
12dbj|AB167080.1| Curculigo latifolia NAS-2 mRNA for neoculin acid... 98 3e-17
13emb|AJ276271.1|CAR276271 Cicer arietinum mRNA for putative 60S r... 60 7e-06
14dbj|AB035569.1| Chara globularis cgrpl6 mRNA for 60S ribosomal p... 48 0.028
15gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chr... 44 0.44
16gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 44 0.44
17gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 44 0.44
18ref|XM_571207.1| Cryptococcus neoformans var. neoformans JEC21 s... 44 0.44
19emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 44 0.44
20emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete ... 44 0.44
21dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 44 0.44
22emb|AJ011715.1|CPA011715 Cyanophora paradoxa mRNA for 60S riboso... 44 0.44
23gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence 42 1.7
24ref|XM_414701.1| PREDICTED: Gallus gallus similar to ATP-binding... 42 1.7
25ref|XM_363819.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 1.7
26emb|AJ853827.1| Uncultured methanogenic archaeon partial mcrA ge... 42 1.7
27gb|AC074397.7| Homo sapiens BAC clone RP11-598O8 from 7, complet... 42 1.7
28gb|CP000092.1| Ralstonia eutropha JMP134 megaplasmid, complete s... 42 1.7
29gb|DQ351275.1| Streptomyces sp. NRRL 30748 meridamycin biosynthe... 42 1.7
30gb|AC159883.2| Mus musculus BAC clone RP24-490A17 from chromosom... 42 1.7
31gb|AC151614.2| Emiliania huxleyi clone JGIACCU-13K1, complete se... 42 1.7
32dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
33dbj|AP003541.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
34dbj|AP004737.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
35gb|AC161256.3| Mus musculus BAC clone RP24-70H20 from chromosome... 42 1.7
36gb|DQ214771.1| Taeniopygia guttata clone 0061P0023H09 ribosomal ... 40 6.9
37gb|DQ214770.1| Taeniopygia guttata clone 0061P0025H04 ribosomal ... 40 6.9
38gb|AC022675.7| Mus musculus chromosome 1, clone RP23-59N15, comp... 40 6.9
39gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 6.9
40gb|AY071732.1| Drosophila melanogaster RH44960 full insert cDNA 40 6.9
41gb|AC098742.4| Mus musculus BAC clone RP23-122N2 from 14, comple... 40 6.9
42gb|AC146748.16| Medicago truncatula clone mth2-65k8, complete se... 40 6.9
43emb|AL590677.7| Human DNA sequence from clone RP11-214D15 on chr... 40 6.9
44emb|AL355485.9| Human DNA sequence from clone RP11-240M20 on chr... 40 6.9
45gb|AE005744.1| Caulobacter crescentus CB15 section 70 of 359 of ... 40 6.9
46dbj|AK094601.1| Homo sapiens cDNA FLJ37282 fis, clone BRAMY2013216 40 6.9
47gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 40 6.9
48ref|NM_141282.2| Drosophila melanogaster Ribosomal protein L35A ... 40 6.9
49gb|AC004671.1| Homo sapiens 12p13.3 PAC RPCI3-340I3 (Roswell Par... 40 6.9
50gb|AC108157.3| Homo sapiens BAC clone RP11-580P21 from 4, comple... 40 6.9
51gb|AC074349.6| Homo sapiens BAC clone RP11-703G6 from 4, complet... 40 6.9
52gb|AY071136.1| Drosophila melanogaster RE17737 full length cDNA 40 6.9
53gb|AC069200.6| Homo sapiens BAC clone RP11-177J6 from 4, complet... 40 6.9
54gb|AC026692.5| Homo sapiens chromosome 5 clone CTC-257L10, compl... 40 6.9
55gb|AC035147.4| Homo sapiens chromosome 5 clone CTD-2309M13, comp... 40 6.9
56gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 6.9
57gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 6.9
58gb|AC009538.4|AC009538 Drosophila melanogaster, chromosome 3R, r... 40 6.9
59gb|AC095043.3| Homo sapiens BAC clone RP11-124A7 from 4, complet... 40 6.9
60gb|AC008190.7|AC008190 Drosophila melanogaster, chromosome 3R, r... 40 6.9
61gb|AC068282.8| Homo sapiens BAC clone RP11-314L11 from 2, comple... 40 6.9
62gb|AC044787.6|AC044787 Homo sapiens chromosome 15 clone CTD-2270... 40 6.9
63gb|AC017006.4| Homo sapiens BAC clone RP11-110G2 from 2, complet... 40 6.9
64gb|AE004558.1| Pseudomonas aeruginosa PAO1, section 119 of 529 o... 40 6.9
65emb|X69378.1|MCYL16 M.crystallinum mRNA for ribosomal protein YL16 40 6.9
66gb|AC154243.2| Mus musculus BAC clone RP24-173F3 from 14, comple... 40 6.9
67ref|NM_210401.1| Eremothecium gossypii AER190Wp (AER190W), mRNA 40 6.9
68gb|AE003602.4| Drosophila melanogaster chromosome 3R, section 6 ... 40 6.9
69gb|AC004047.1|AC004047 Homo sapiens chromosome 4 clone B150J4 ma... 40 6.9
70gb|AC005394.1|AC005394 Homo sapiens chromosome 19, cosmid F8518,... 40 6.9
71emb|AL354819.15| Human DNA sequence from clone RP11-7B3 on chrom... 40 6.9
72emb|AL365314.16| Mouse DNA sequence from clone RP23-106N23 on ch... 40 6.9 
>gb|AY846820.1| Triticum aestivum ribosomal protein L6 mRNA, complete cds
          Length = 686

 Score =  801 bits (404), Expect = 0.0
 Identities = 482/508 (94%)
 Strand = Plus / Plus

                                                                       
Query: 4   ccgacgtcgaagatggcgctcggcataaagcggacgtcgaggtcgcgcacctaccaccgc 63
           ||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||
Sbjct: 26  ccgacgtcgaagatggcgctcggcataaagcgggcgtcgagatcgcacacctaccaccgc 85

                                                                       
Query: 64  cgcgggctttgggccatcaaggccaagcacggcggcgccttccctaaggccgagaagccg 123
           ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 86  cgcgggctttgggccatcaaggccaagcacggcggcgccttgcccaaggccgagaagccg 145

                                                                       
Query: 124 gccgccgtcgccgagcccaagttctatcccgccgatgatgtcaagccacgcaccttcagc 183
           |||||| ||||||||||||||||||||||||| ||||||||||||||||||||| | |||
Sbjct: 146 gccgccatcgccgagcccaagttctatcccgctgatgatgtcaagccacgcaccgtgagc 205

                                                                       
Query: 184 acacgcaagccccatcccaccaagctcaggtcgaccatcacgccgggcacggtgctgatc 243
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 206 acacgcaagccccatcccaccaagctcaggtcgaccatcacaccgggcacggtgctgatc 265

                                                                       
Query: 244 ctgctcgcggggaggtacatggggaagcgcgtcgtgttcctcaagcagctcaagtccggc 303
           ||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||
Sbjct: 266 ctgctcgcggggaggtacatgggaaagcgcgtggtgttcctcaagcagctccagtccggc 325

                                                                       
Query: 304 ctgctcctcatcactggacctttcaagatcaatggcgtgccaatccgcagagtgaaccag 363
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 cttctcctcatcactggacctttcaagatcaatggcgtgccaatccgcagagtgaaccag 385

                                                                       
Query: 364 gcttatgtcatttccacatccacaaggctcgacatctccaaggttaatatgcaaaagttt 423
           ||||| |||||| |||||||||||| | |||||||||| ||||||||| |||| ||||||
Sbjct: 386 gcttacgtcattgccacatccacaaaggtcgacatctctaaggttaatgtgcagaagttt 445

                                                                       
Query: 424 gatgacaagtactttgctagggagaagaagactagggcaaagaagtctgagggcgagctg 483
           |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| 
Sbjct: 446 gatgacaagtacttcgctagggagaagaagactagggcaaagaagactgagggcgagcta 505

                                       
Query: 484 tttgagtcggagaaggaggcaacgaaga 511
           ||||||||||| ||||||||||| ||||
Sbjct: 506 tttgagtcggataaggaggcaaccaaga 533
to top
>ref|XM_466485.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 660

 Score =  476 bits (240), Expect = e-131
 Identities = 441/508 (86%)
 Strand = Plus / Plus

                                                                       
Query: 4   ccgacgtcgaagatggcgctcggcataaagcggacgtcgaggtcgcgcacctaccaccgc 63
           |||||||||||| || |||  ||||| |||||  ||||| |||||| |||||||||||||
Sbjct: 7   ccgacgtcgaagctgtcgcagggcatcaagcgcgcgtcgcggtcgcacacctaccaccgc 66

                                                                       
Query: 64  cgcgggctttgggccatcaaggccaagcacggcggcgccttccctaaggccgagaagccg 123
           |||||||| |||||||||||||||||| |||||||| ||||||| |||||||  ||||| 
Sbjct: 67  cgcgggctctgggccatcaaggccaagaacggcggcaccttccccaaggccggcaagccc 126

                                                                       
Query: 124 gccgccgtcgccgagcccaagttctatcccgccgatgatgtcaagccacgcaccttcagc 183
           ||||||| |||||||||||||||||| |||||||| || |||||||| ||| ||  ||||
Sbjct: 127 gccgccgccgccgagcccaagttctaccccgccgacgacgtcaagccccgcgcccccagc 186

                                                                       
Query: 184 acacgcaagccccatcccaccaagctcaggtcgaccatcacgccgggcacggtgctgatc 243
           || |||||| || | || ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 187 acccgcaaggccaaccctaccaagctcaggtcgaccatcacgccggggacggtgctgatc 246

                                                                       
Query: 244 ctgctcgcggggaggtacatggggaagcgcgtcgtgttcctcaagcagctcaagtccggc 303
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ctgctcgccgggaggtacatggggaagcgcgtcgtgttcctcaagcagctcaagtccggc 306

                                                                       
Query: 304 ctgctcctcatcactggacctttcaagatcaatggcgtgccaatccgcagagtgaaccag 363
           |||||||||||||| |||||||| ||||||||||| ||||| |||||| | |||||||||
Sbjct: 307 ctgctcctcatcaccggaccttttaagatcaatggagtgcccatccgccgtgtgaaccag 366

                                                                       
Query: 364 gcttatgtcatttccacatccacaaggctcgacatctccaaggttaatatgcaaaagttt 423
           || || |||||| |||||||||| | | | ||||||||    |||||  || | ||||||
Sbjct: 367 gcctacgtcattgccacatccacgaaggttgacatctctggtgttaaggtggataagttt 426

                                                                       
Query: 424 gatgacaagtactttgctagggagaagaagactagggcaaagaagtctgagggcgagctg 483
           |||||||||||||||||  |||| |||||| | | ||| |||||| | ||||| || || 
Sbjct: 427 gatgacaagtactttgcccgggacaagaaggcaaaggccaagaagaccgagggtgaactt 486

                                       
Query: 484 tttgagtcggagaaggaggcaacgaaga 511
           |||||| | |||||||||||||| ||||
Sbjct: 487 tttgagacagagaaggaggcaaccaaga 514
to top
>dbj|AK072777.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139B06, full
           insert sequence
          Length = 1030

 Score =  476 bits (240), Expect = e-131
 Identities = 441/508 (86%)
 Strand = Plus / Plus

                                                                       
Query: 4   ccgacgtcgaagatggcgctcggcataaagcggacgtcgaggtcgcgcacctaccaccgc 63
           |||||||||||| || |||  ||||| |||||  ||||| |||||| |||||||||||||
Sbjct: 77  ccgacgtcgaagctgtcgcagggcatcaagcgcgcgtcgcggtcgcacacctaccaccgc 136

                                                                       
Query: 64  cgcgggctttgggccatcaaggccaagcacggcggcgccttccctaaggccgagaagccg 123
           |||||||| |||||||||||||||||| |||||||| ||||||| |||||||  ||||| 
Sbjct: 137 cgcgggctctgggccatcaaggccaagaacggcggcaccttccccaaggccggcaagccc 196

                                                                       
Query: 124 gccgccgtcgccgagcccaagttctatcccgccgatgatgtcaagccacgcaccttcagc 183
           ||||||| |||||||||||||||||| |||||||| || |||||||| ||| ||  ||||
Sbjct: 197 gccgccgccgccgagcccaagttctaccccgccgacgacgtcaagccccgcgcccccagc 256

                                                                       
Query: 184 acacgcaagccccatcccaccaagctcaggtcgaccatcacgccgggcacggtgctgatc 243
           || |||||| || | || ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 257 acccgcaaggccaaccctaccaagctcaggtcgaccatcacgccggggacggtgctgatc 316

                                                                       
Query: 244 ctgctcgcggggaggtacatggggaagcgcgtcgtgttcctcaagcagctcaagtccggc 303
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ctgctcgccgggaggtacatggggaagcgcgtcgtgttcctcaagcagctcaagtccggc 376

                                                                       
Query: 304 ctgctcctcatcactggacctttcaagatcaatggcgtgccaatccgcagagtgaaccag 363
           |||||||||||||| |||||||| ||||||||||| ||||| |||||| | |||||||||
Sbjct: 377 ctgctcctcatcaccggaccttttaagatcaatggagtgcccatccgccgtgtgaaccag 436

                                                                       
Query: 364 gcttatgtcatttccacatccacaaggctcgacatctccaaggttaatatgcaaaagttt 423
           || || |||||| |||||||||| | | | ||||||||    |||||  || | ||||||
Sbjct: 437 gcctacgtcattgccacatccacgaaggttgacatctctggtgttaaggtggataagttt 496

                                                                       
Query: 424 gatgacaagtactttgctagggagaagaagactagggcaaagaagtctgagggcgagctg 483
           |||||||||||||||||  |||| |||||| | | ||| |||||| | ||||| || || 
Sbjct: 497 gatgacaagtactttgcccgggacaagaaggcaaaggccaagaagaccgagggtgaactt 556

                                       
Query: 484 tttgagtcggagaaggaggcaacgaaga 511
           |||||| | |||||||||||||| ||||
Sbjct: 557 tttgagacagagaaggaggcaaccaaga 584
to top
>ref|XM_472843.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 669

 Score =  343 bits (173), Expect = 3e-91
 Identities = 430/517 (83%), Gaps = 9/517 (1%)
 Strand = Plus / Plus

                                                                       
Query: 4   ccgacgtcgaagatggcgctcggcataaagcggacgtcgaggtcgcgcacctaccaccgc 63
           |||||||||||| || |||  ||||| |||  | ||||| |||||| ||| |||||||||
Sbjct: 7   ccgacgtcgaagctgtcgcagggcatcaagaaggcgtcgcggtcgcacacgtaccaccgc 66

                                                                       
Query: 64  cgcgggctttgggccatcaaggccaagcacggcggcgccttccctaaggccgagaagc-- 121
           |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||  
Sbjct: 67  cgcgggctgtgggccatcaaggccaagcacggcggcgccttccccaaggccgagaagccc 126

                                                                       
Query: 122 -------cggccgccgtcgccgagcccaagttctatcccgccgatgatgtcaagccacgc 174
                  | ||||||| ||||| |||||||||||| |||||||| || |||||||| |||
Sbjct: 127 gccgccgcagccgccgccgccgcgcccaagttctaccccgccgacgacgtcaagccccgc 186

                                                                       
Query: 175 accttcagcacacgcaagccccatcccaccaagctcaggtcgaccatcacgccgggcacg 234
                |||||| ||||||||| | || ||||||||||||||| |||||||||| || || 
Sbjct: 187 cagcccagcacccgcaagcccaaccctaccaagctcaggtcgtccatcacgcctgggaca 246

                                                                       
Query: 235 gtgctgatcctgctcgcggggaggtacatggggaagcgcgtcgtgttcctcaagcagctc 294
           ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 247 gtgctgatcctgctcgccgggaggttcatggggaagcgcgtcgtgttcctcaagcagctc 306

                                                                       
Query: 295 aagtccggcctgctcctcatcactggacctttcaagatcaatggcgtgccaatccgcaga 354
           || ||||||||||| ||| |||| |||||||| ||||||||||| || || |||||| | 
Sbjct: 307 aaatccggcctgcttctcgtcaccggaccttttaagatcaatggagttccgatccgccgt 366

                                                                       
Query: 355 gtgaaccaggcttatgtcatttccacatccacaaggctcgacatctccaaggttaatatg 414
           ||||||||| | || |||||| | || ||||||| | | || |||||    |||||| ||
Sbjct: 367 gtgaaccagccctacgtcattgctacgtccacaaaggttgatatctctggtgttaatgtg 426

                                                                       
Query: 415 caaaagtttgatgacaagtactttgctagggagaagaagactagggcaaagaagtctgag 474
            | ||||||||||||||||||||  ||||||| ||||||   | ||| |||||| | |||
Sbjct: 427 gagaagtttgatgacaagtacttctctagggacaagaagcagaaggcgaagaagaccgag 486

                                                
Query: 475 ggcgagctgtttgagtcggagaaggaggcaacgaaga 511
           || || || |||||| | |||||||||||||| ||||
Sbjct: 487 ggtgaactttttgagactgagaaggaggcaaccaaga 523
to top
>dbj|AK067896.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123D20, full
           insert sequence
          Length = 933

 Score =  343 bits (173), Expect = 3e-91
 Identities = 430/517 (83%), Gaps = 9/517 (1%)
 Strand = Plus / Plus

                                                                       
Query: 4   ccgacgtcgaagatggcgctcggcataaagcggacgtcgaggtcgcgcacctaccaccgc 63
           |||||||||||| || |||  ||||| |||  | ||||| |||||| ||| |||||||||
Sbjct: 61  ccgacgtcgaagctgtcgcagggcatcaagaaggcgtcgcggtcgcacacgtaccaccgc 120

                                                                       
Query: 64  cgcgggctttgggccatcaaggccaagcacggcggcgccttccctaaggccgagaagc-- 121
           |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||  
Sbjct: 121 cgcgggctgtgggccatcaaggccaagcacggcggcgccttccccaaggccgagaagccc 180

                                                                       
Query: 122 -------cggccgccgtcgccgagcccaagttctatcccgccgatgatgtcaagccacgc 174
                  | ||||||| ||||| |||||||||||| |||||||| || |||||||| |||
Sbjct: 181 gccgccgcagccgccgccgccgcgcccaagttctaccccgccgacgacgtcaagccccgc 240

                                                                       
Query: 175 accttcagcacacgcaagccccatcccaccaagctcaggtcgaccatcacgccgggcacg 234
                |||||| ||||||||| | || ||||||||||||||| |||||||||| || || 
Sbjct: 241 cagcccagcacccgcaagcccaaccctaccaagctcaggtcgtccatcacgcctgggaca 300

                                                                       
Query: 235 gtgctgatcctgctcgcggggaggtacatggggaagcgcgtcgtgttcctcaagcagctc 294
           ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 301 gtgctgatcctgctcgccgggaggttcatggggaagcgcgtcgtgttcctcaagcagctc 360

                                                                       
Query: 295 aagtccggcctgctcctcatcactggacctttcaagatcaatggcgtgccaatccgcaga 354
           || ||||||||||| ||| |||| |||||||| ||||||||||| || || |||||| | 
Sbjct: 361 aaatccggcctgcttctcgtcaccggaccttttaagatcaatggagttccgatccgccgt 420

                                                                       
Query: 355 gtgaaccaggcttatgtcatttccacatccacaaggctcgacatctccaaggttaatatg 414
           ||||||||| | || |||||| | || ||||||| | | || |||||    |||||| ||
Sbjct: 421 gtgaaccagccctacgtcattgctacgtccacaaaggttgatatctctggtgttaatgtg 480

                                                                       
Query: 415 caaaagtttgatgacaagtactttgctagggagaagaagactagggcaaagaagtctgag 474
            | ||||||||||||||||||||  ||||||| ||||||   | ||| |||||| | |||
Sbjct: 481 gagaagtttgatgacaagtacttctctagggacaagaagcagaaggcgaagaagaccgag 540

                                                
Query: 475 ggcgagctgtttgagtcggagaaggaggcaacgaaga 511
           || || || |||||| | |||||||||||||| ||||
Sbjct: 541 ggtgaactttttgagactgagaaggaggcaaccaaga 577
to top
>gb|AY103559.1| Zea mays PCO112591 mRNA sequence
          Length = 1361

 Score =  246 bits (124), Expect = 6e-62
 Identities = 280/332 (84%)
 Strand = Plus / Plus

                                                                       
Query: 44  ggtcgcgcacctaccaccgccgcgggctttgggccatcaaggccaagcacggcggcgcct 103
           |||||| ||| ||||| ||||| ||||| |||||||||||||||||| ||||||||||||
Sbjct: 451 ggtcgcacacgtaccatcgccgtgggctgtgggccatcaaggccaagaacggcggcgcct 510

                                                                       
Query: 104 tccctaaggccgagaagccggccgccgtcgccgagcccaagttctatcccgccgatgatg 163
           |||| |||||||| ||| | ||||||| ||  || ||||||||||| || ||||| || |
Sbjct: 511 tccccaaggccgacaaggccgccgccgccgtggaacccaagttctaccctgccgacgacg 570

                                                                       
Query: 164 tcaagccacgcaccttcagcacacgcaagccccatcccaccaagctcaggtcgaccatca 223
           ||||||| |||     |||||| ||||||||  | || |||||||||||||||| |||||
Sbjct: 571 tcaagccccgcgttcccagcacccgcaagcctaagcctaccaagctcaggtcgagcatca 630

                                                                       
Query: 224 cgccgggcacggtgctgatcctgctcgcggggaggtacatggggaagcgcgtcgtgttcc 283
           |||| || |||||||||||||| ||||| ||| | | |||||||||| | || ||||| |
Sbjct: 631 cgcctgggacggtgctgatcctcctcgcagggcgcttcatggggaagagagtggtgtttc 690

                                                                       
Query: 284 tcaagcagctcaagtccggcctgctcctcatcactggacctttcaagatcaatggcgtgc 343
           |||||||||||||||| ||||||||||| ||| |||| ||||||||||||||||| || |
Sbjct: 691 tcaagcagctcaagtctggcctgctccttatctctgggcctttcaagatcaatggagtac 750

                                           
Query: 344 caatccgcagagtgaaccaggcttatgtcatt 375
           | |||||| | ||||||||| | |||||||||
Sbjct: 751 cgatccgccgtgtgaaccagacctatgtcatt 782



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 74/87 (85%)
 Strand = Plus / Plus

                                                                       
Query: 418 aagtttgatgacaagtactttgctagggagaagaagactagggcaaagaagtctgagggc 477
           ||||||||||||||||||||||| ||||||||||||   | ||  |||||| | ||||||
Sbjct: 825 aagtttgatgacaagtactttgccagggagaagaagcagaaggtgaagaagaccgagggc 884

                                      
Query: 478 gagctgtttgagtcggagaaggaggca 504
           ||||| |||||| | || |||||||||
Sbjct: 885 gagctttttgagacagaaaaggaggca 911
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  198 bits (100), Expect = 1e-47
 Identities = 106/108 (98%)
 Strand = Plus / Minus

                                                                            
Query: 210      caggtcgaccatcacgccgggcacggtgctgatcctgctcgcggggaggtacatggggaa 269
                ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 22903171 caggtcgaccatcacgccggggacggtgctgatcctgctcgccgggaggtacatggggaa 22903112

                                                                
Query: 270      gcgcgtcgtgttcctcaagcagctcaagtccggcctgctcctcatcac 317
                ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22903111 gcgcgtcgtgttcctcaagcagctcaagtccggcctgctcctcatcac 22903064



 Score =  190 bits (96), Expect = 3e-45
 Identities = 183/212 (86%)
 Strand = Plus / Minus

                                                                            
Query: 4        ccgacgtcgaagatggcgctcggcataaagcggacgtcgaggtcgcgcacctaccaccgc 63
                |||||||||||| || |||  ||||| |||||  ||||| |||||| |||||||||||||
Sbjct: 22903474 ccgacgtcgaagctgtcgcagggcatcaagcgcgcgtcgcggtcgcacacctaccaccgc 22903415

                                                                            
Query: 64       cgcgggctttgggccatcaaggccaagcacggcggcgccttccctaaggccgagaagccg 123
                |||||||| |||||||||||||||||| |||||||| ||||||| |||||||  ||||| 
Sbjct: 22903414 cgcgggctctgggccatcaaggccaagaacggcggcaccttccccaaggccggcaagccc 22903355

                                                                            
Query: 124      gccgccgtcgccgagcccaagttctatcccgccgatgatgtcaagccacgcaccttcagc 183
                ||||||| |||||||||||||||||| |||||||| || |||||||| ||| ||  ||||
Sbjct: 22903354 gccgccgccgccgagcccaagttctaccccgccgacgacgtcaagccccgcgcccccagc 22903295

                                                
Query: 184      acacgcaagccccatcccaccaagctcaggtc 215
                || |||||| || | || ||||||||||||||
Sbjct: 22903294 acccgcaaggccaaccctaccaagctcaggtc 22903263



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 150/184 (81%)
 Strand = Plus / Minus

                                                                            
Query: 319      ggacctttcaagatcaatggcgtgccaatccgcagagtgaaccaggcttatgtcatttcc 378
                |||||||| ||||||||||| ||||| |||||| | ||||||||||| || |||||| ||
Sbjct: 22902225 ggaccttttaagatcaatggagtgcccatccgccgtgtgaaccaggcctacgtcattgcc 22902166

                                                                            
Query: 379      acatccacaaggctcgacatctccaaggttaatatgcaaaagtttgatgacaagtacttt 438
                |||||||| | | | ||||||||    |||||  || | |||||||||||||||||||||
Sbjct: 22902165 acatccacgaaggttgacatctctggtgttaaggtggataagtttgatgacaagtacttt 22902106

                                                                            
Query: 439      gctagggagaagaagactagggcaaagaagtctgagggcgagctgtttgagtcggagaag 498
                ||  |||| |||||| | | ||| |||||| | ||||| || || |||||| | ||||||
Sbjct: 22902105 gcccgggacaagaaggcaaaggccaagaagaccgagggtgaactttttgagacagagaag 22902046

                    
Query: 499      gagg 502
                ||||
Sbjct: 22902045 gagg 22902042
to top
>dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0016G10
          Length = 143211

 Score =  198 bits (100), Expect = 1e-47
 Identities = 106/108 (98%)
 Strand = Plus / Minus

                                                                         
Query: 210   caggtcgaccatcacgccgggcacggtgctgatcctgctcgcggggaggtacatggggaa 269
             ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 22973 caggtcgaccatcacgccggggacggtgctgatcctgctcgccgggaggtacatggggaa 22914

                                                             
Query: 270   gcgcgtcgtgttcctcaagcagctcaagtccggcctgctcctcatcac 317
             ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22913 gcgcgtcgtgttcctcaagcagctcaagtccggcctgctcctcatcac 22866



 Score =  190 bits (96), Expect = 3e-45
 Identities = 183/212 (86%)
 Strand = Plus / Minus

                                                                         
Query: 4     ccgacgtcgaagatggcgctcggcataaagcggacgtcgaggtcgcgcacctaccaccgc 63
             |||||||||||| || |||  ||||| |||||  ||||| |||||| |||||||||||||
Sbjct: 23276 ccgacgtcgaagctgtcgcagggcatcaagcgcgcgtcgcggtcgcacacctaccaccgc 23217

                                                                         
Query: 64    cgcgggctttgggccatcaaggccaagcacggcggcgccttccctaaggccgagaagccg 123
             |||||||| |||||||||||||||||| |||||||| ||||||| |||||||  ||||| 
Sbjct: 23216 cgcgggctctgggccatcaaggccaagaacggcggcaccttccccaaggccggcaagccc 23157

                                                                         
Query: 124   gccgccgtcgccgagcccaagttctatcccgccgatgatgtcaagccacgcaccttcagc 183
             ||||||| |||||||||||||||||| |||||||| || |||||||| ||| ||  ||||
Sbjct: 23156 gccgccgccgccgagcccaagttctaccccgccgacgacgtcaagccccgcgcccccagc 23097

                                             
Query: 184   acacgcaagccccatcccaccaagctcaggtc 215
             || |||||| || | || ||||||||||||||
Sbjct: 23096 acccgcaaggccaaccctaccaagctcaggtc 23065



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 150/184 (81%)
 Strand = Plus / Minus

                                                                         
Query: 319   ggacctttcaagatcaatggcgtgccaatccgcagagtgaaccaggcttatgtcatttcc 378
             |||||||| ||||||||||| ||||| |||||| | ||||||||||| || |||||| ||
Sbjct: 22027 ggaccttttaagatcaatggagtgcccatccgccgtgtgaaccaggcctacgtcattgcc 21968

                                                                         
Query: 379   acatccacaaggctcgacatctccaaggttaatatgcaaaagtttgatgacaagtacttt 438
             |||||||| | | | ||||||||    |||||  || | |||||||||||||||||||||
Sbjct: 21967 acatccacgaaggttgacatctctggtgttaaggtggataagtttgatgacaagtacttt 21908

                                                                         
Query: 439   gctagggagaagaagactagggcaaagaagtctgagggcgagctgtttgagtcggagaag 498
             ||  |||| |||||| | | ||| |||||| | ||||| || || |||||| | ||||||
Sbjct: 21907 gcccgggacaagaaggcaaaggccaagaagaccgagggtgaactttttgagacagagaag 21848

                 
Query: 499   gagg 502
             ||||
Sbjct: 21847 gagg 21844
to top
>dbj|AP005640.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0006O15
          Length = 139723

 Score =  198 bits (100), Expect = 1e-47
 Identities = 106/108 (98%)
 Strand = Plus / Minus

                                                                          
Query: 210    caggtcgaccatcacgccgggcacggtgctgatcctgctcgcggggaggtacatggggaa 269
              ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 136509 caggtcgaccatcacgccggggacggtgctgatcctgctcgccgggaggtacatggggaa 136450

                                                              
Query: 270    gcgcgtcgtgttcctcaagcagctcaagtccggcctgctcctcatcac 317
              ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136449 gcgcgtcgtgttcctcaagcagctcaagtccggcctgctcctcatcac 136402



 Score =  190 bits (96), Expect = 3e-45
 Identities = 183/212 (86%)
 Strand = Plus / Minus

                                                                          
Query: 4      ccgacgtcgaagatggcgctcggcataaagcggacgtcgaggtcgcgcacctaccaccgc 63
              |||||||||||| || |||  ||||| |||||  ||||| |||||| |||||||||||||
Sbjct: 136812 ccgacgtcgaagctgtcgcagggcatcaagcgcgcgtcgcggtcgcacacctaccaccgc 136753

                                                                          
Query: 64     cgcgggctttgggccatcaaggccaagcacggcggcgccttccctaaggccgagaagccg 123
              |||||||| |||||||||||||||||| |||||||| ||||||| |||||||  ||||| 
Sbjct: 136752 cgcgggctctgggccatcaaggccaagaacggcggcaccttccccaaggccggcaagccc 136693

                                                                          
Query: 124    gccgccgtcgccgagcccaagttctatcccgccgatgatgtcaagccacgcaccttcagc 183
              ||||||| |||||||||||||||||| |||||||| || |||||||| ||| ||  ||||
Sbjct: 136692 gccgccgccgccgagcccaagttctaccccgccgacgacgtcaagccccgcgcccccagc 136633

                                              
Query: 184    acacgcaagccccatcccaccaagctcaggtc 215
              || |||||| || | || ||||||||||||||
Sbjct: 136632 acccgcaaggccaaccctaccaagctcaggtc 136601



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 150/184 (81%)
 Strand = Plus / Minus

                                                                          
Query: 319    ggacctttcaagatcaatggcgtgccaatccgcagagtgaaccaggcttatgtcatttcc 378
              |||||||| ||||||||||| ||||| |||||| | ||||||||||| || |||||| ||
Sbjct: 135563 ggaccttttaagatcaatggagtgcccatccgccgtgtgaaccaggcctacgtcattgcc 135504

                                                                          
Query: 379    acatccacaaggctcgacatctccaaggttaatatgcaaaagtttgatgacaagtacttt 438
              |||||||| | | | ||||||||    |||||  || | |||||||||||||||||||||
Sbjct: 135503 acatccacgaaggttgacatctctggtgttaaggtggataagtttgatgacaagtacttt 135444

                                                                          
Query: 439    gctagggagaagaagactagggcaaagaagtctgagggcgagctgtttgagtcggagaag 498
              ||  |||| |||||| | | ||| |||||| | ||||| || || |||||| | ||||||
Sbjct: 135443 gcccgggacaagaaggcaaaggccaagaagaccgagggtgaactttttgagacagagaag 135384

                  
Query: 499    gagg 502
              ||||
Sbjct: 135383 gagg 135380
to top
>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23,
             complete sequence
          Length = 130273

 Score =  145 bits (73), Expect = 2e-31
 Identities = 183/221 (82%), Gaps = 9/221 (4%)
 Strand = Plus / Minus

                                                                         
Query: 4     ccgacgtcgaagatggcgctcggcataaagcggacgtcgaggtcgcgcacctaccaccgc 63
             |||||||||||| || |||  ||||| |||  | ||||| |||||| ||| |||||||||
Sbjct: 80955 ccgacgtcgaagctgtcgcagggcatcaagaaggcgtcgcggtcgcacacgtaccaccgc 80896

                                                                         
Query: 64    cgcgggctttgggccatcaaggccaagcacggcggcgccttccctaaggccgagaagc-- 121
             |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||  
Sbjct: 80895 cgcgggctgtgggccatcaaggccaagcacggcggcgccttccccaaggccgagaagccc 80836

                                                                         
Query: 122   -------cggccgccgtcgccgagcccaagttctatcccgccgatgatgtcaagccacgc 174
                    | ||||||| ||||| |||||||||||| |||||||| || |||||||| |||
Sbjct: 80835 gccgccgcagccgccgccgccgcgcccaagttctaccccgccgacgacgtcaagccccgc 80776

                                                      
Query: 175   accttcagcacacgcaagccccatcccaccaagctcaggtc 215
                  |||||| ||||||||| | || ||||||||||||||
Sbjct: 80775 cagcccagcacccgcaagcccaaccctaccaagctcaggtc 80735



 Score =  143 bits (72), Expect = 6e-31
 Identities = 99/108 (91%)
 Strand = Plus / Minus

                                                                         
Query: 210   caggtcgaccatcacgccgggcacggtgctgatcctgctcgcggggaggtacatggggaa 269
             ||||||| |||||||||| || || ||||||||||||||||| ||||||| |||||||||
Sbjct: 80643 caggtcgtccatcacgcctgggacagtgctgatcctgctcgccgggaggttcatggggaa 80584

                                                             
Query: 270   gcgcgtcgtgttcctcaagcagctcaagtccggcctgctcctcatcac 317
             ||||||||||||||||||||||||||| ||||||||||| ||| ||||
Sbjct: 80583 gcgcgtcgtgttcctcaagcagctcaaatccggcctgcttctcgtcac 80536



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 146/184 (79%)
 Strand = Plus / Minus

                                                                         
Query: 319   ggacctttcaagatcaatggcgtgccaatccgcagagtgaaccaggcttatgtcatttcc 378
             |||||||| ||||||||||| || || |||||| | ||||||||| | || |||||| | 
Sbjct: 79487 ggaccttttaagatcaatggagttccgatccgccgtgtgaaccagccctacgtcattgct 79428

                                                                         
Query: 379   acatccacaaggctcgacatctccaaggttaatatgcaaaagtttgatgacaagtacttt 438
             || ||||||| | | || |||||    |||||| || | |||||||||||||||||||| 
Sbjct: 79427 acgtccacaaaggttgatatctctggtgttaatgtggagaagtttgatgacaagtacttc 79368

                                                                         
Query: 439   gctagggagaagaagactagggcaaagaagtctgagggcgagctgtttgagtcggagaag 498
              ||||||| ||||||   | ||| |||||| | ||||| || || |||||| | ||||||
Sbjct: 79367 tctagggacaagaagcagaaggcgaagaagaccgagggtgaactttttgagactgagaag 79308

                 
Query: 499   gagg 502
             ||||
Sbjct: 79307 gagg 79304
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  145 bits (73), Expect = 2e-31
 Identities = 183/221 (82%), Gaps = 9/221 (4%)
 Strand = Plus / Minus

                                                                            
Query: 4        ccgacgtcgaagatggcgctcggcataaagcggacgtcgaggtcgcgcacctaccaccgc 63
                |||||||||||| || |||  ||||| |||  | ||||| |||||| ||| |||||||||
Sbjct: 23638274 ccgacgtcgaagctgtcgcagggcatcaagaaggcgtcgcggtcgcacacgtaccaccgc 23638215

                                                                            
Query: 64       cgcgggctttgggccatcaaggccaagcacggcggcgccttccctaaggccgagaagc-- 121
                |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||  
Sbjct: 23638214 cgcgggctgtgggccatcaaggccaagcacggcggcgccttccccaaggccgagaagccc 23638155

                                                                            
Query: 122      -------cggccgccgtcgccgagcccaagttctatcccgccgatgatgtcaagccacgc 174
                       | ||||||| ||||| |||||||||||| |||||||| || |||||||| |||
Sbjct: 23638154 gccgccgcagccgccgccgccgcgcccaagttctaccccgccgacgacgtcaagccccgc 23638095

                                                         
Query: 175      accttcagcacacgcaagccccatcccaccaagctcaggtc 215
                     |||||| ||||||||| | || ||||||||||||||
Sbjct: 23638094 cagcccagcacccgcaagcccaaccctaccaagctcaggtc 23638054



 Score =  143 bits (72), Expect = 6e-31
 Identities = 99/108 (91%)
 Strand = Plus / Minus

                                                                            
Query: 210      caggtcgaccatcacgccgggcacggtgctgatcctgctcgcggggaggtacatggggaa 269
                ||||||| |||||||||| || || ||||||||||||||||| ||||||| |||||||||
Sbjct: 23637962 caggtcgtccatcacgcctgggacagtgctgatcctgctcgccgggaggttcatggggaa 23637903

                                                                
Query: 270      gcgcgtcgtgttcctcaagcagctcaagtccggcctgctcctcatcac 317
                ||||||||||||||||||||||||||| ||||||||||| ||| ||||
Sbjct: 23637902 gcgcgtcgtgttcctcaagcagctcaaatccggcctgcttctcgtcac 23637855



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 146/184 (79%)
 Strand = Plus / Minus

                                                                            
Query: 319      ggacctttcaagatcaatggcgtgccaatccgcagagtgaaccaggcttatgtcatttcc 378
                |||||||| ||||||||||| || || |||||| | ||||||||| | || |||||| | 
Sbjct: 23636806 ggaccttttaagatcaatggagttccgatccgccgtgtgaaccagccctacgtcattgct 23636747

                                                                            
Query: 379      acatccacaaggctcgacatctccaaggttaatatgcaaaagtttgatgacaagtacttt 438
                || ||||||| | | || |||||    |||||| || | |||||||||||||||||||| 
Sbjct: 23636746 acgtccacaaaggttgatatctctggtgttaatgtggagaagtttgatgacaagtacttc 23636687

                                                                            
Query: 439      gctagggagaagaagactagggcaaagaagtctgagggcgagctgtttgagtcggagaag 498
                 ||||||| ||||||   | ||| |||||| | ||||| || || |||||| | ||||||
Sbjct: 23636686 tctagggacaagaagcagaaggcgaagaagaccgagggtgaactttttgagactgagaag 23636627

                    
Query: 499      gagg 502
                ||||
Sbjct: 23636626 gagg 23636623
to top
>dbj|AB167080.1| Curculigo latifolia NAS-2 mRNA for neoculin acid subunit, complete
           cds
          Length = 655

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 91/105 (86%)
 Strand = Plus / Minus

                                                                       
Query: 189 caagccccatcccaccaagctcaggtcgaccatcacgccgggcacggtgctgatcctgct 248
           ||||||| | ||||||||||||||| ||| ||| || ||||| |||||||||||||| ||
Sbjct: 105 caagcccaagcccaccaagctcaggccgagcattactccggggacggtgctgatccttct 46

                                                        
Query: 249 cgcggggaggtacatggggaagcgcgtcgtgttcctcaagcagct 293
           ||| ||||||| |||||||||| | ||||| ||||| ||||||||
Sbjct: 45  cgccgggaggttcatggggaagagggtcgttttcctgaagcagct 1
to top
>emb|AJ276271.1|CAR276271 Cicer arietinum mRNA for putative 60S ribosomal protein L6 (ORF1)
          Length = 905

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                 
Query: 73  tgggccatcaaggccaagcacggcggcgccttccctaa 110
           ||||||||||||||||| ||||||||||| ||||||||
Sbjct: 124 tgggccatcaaggccaaacacggcggcgctttccctaa 161
to top
>dbj|AB035569.1| Chara globularis cgrpl6 mRNA for 60S ribosomal protein L6 CgRPL6,
           partial cds
          Length = 609

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 268 aagcgcgtcgtgttcctcaagcagctcaagtccggc 303
           |||||||| || ||||||||||||||| ||||||||
Sbjct: 193 aagcgcgtggtattcctcaagcagctcgagtccggc 228
to top
>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete
              sequence
          Length = 1507550

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                
Query: 353    gagtgaaccaggcttatgtcatttccacatccacaaggctcgacatctcc 402
              |||||| |||||| ||||||||| |||| ||||| | | |||||||||||
Sbjct: 868798 gagtgagccaggcctatgtcattgccacttccaccaaggtcgacatctcc 868847
to top
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 119    agccggccgccgtcgccgagcc 140
              ||||||||||||||||||||||
Sbjct: 546210 agccggccgccgtcgccgagcc 546189
to top
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 119     agccggccgccgtcgccgagcc 140
               ||||||||||||||||||||||
Sbjct: 3228879 agccggccgccgtcgccgagcc 3228900
to top
>ref|XM_571207.1| Cryptococcus neoformans var. neoformans JEC21 structural
           constituent of ribosome (CNE03060) partial mRNA
          Length = 764

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 353 gagtgaaccaggcttatgtcatttccacatccacaaggctcgacatctcc 402
           |||||| |||||| ||||||||| |||| ||||| | | |||||||||||
Sbjct: 426 gagtgagccaggcctatgtcattgccacttccaccaaggtcgacatctcc 475
to top
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 119     agccggccgccgtcgccgagcc 140
               ||||||||||||||||||||||
Sbjct: 2958744 agccggccgccgtcgccgagcc 2958765
to top
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29
          Length = 296500

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 50    gcacctaccaccgccgcgggct 71
             ||||||||||||||||||||||
Sbjct: 30752 gcacctaccaccgccgcgggct 30731
to top
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 225     gccgggcacggtgctgatcctgctcg 250
               ||||||||||| ||||||||||||||
Sbjct: 3202063 gccgggcacggcgctgatcctgctcg 3202038
to top
>emb|AJ011715.1|CPA011715 Cyanophora paradoxa mRNA for 60S ribosomal protein L6 (YL 16 like)
          Length = 806

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 268 aagcgcgtcgtgttcctcaagcagctcaagtccggcctgctcctcatcac 317
           ||||||||||| ||||| |||||||||  ||| ||||| |||||| ||||
Sbjct: 312 aagcgcgtcgtcttcctgaagcagctcgcgtcgggcctcctcctcgtcac 361
to top
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence
          Length = 1395069

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 235     gtgctgatcctgctcgcgggg 255
               |||||||||||||||||||||
Sbjct: 1275969 gtgctgatcctgctcgcgggg 1275949
to top
>ref|XM_414701.1| PREDICTED: Gallus gallus similar to ATP-binding cassette, sub-family
            A member 3; ATP-binding cassette 3; ABC transporter 3
            (LOC416386), partial mRNA
          Length = 4996

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 74   gggccatcaaggccaagcacg 94
            |||||||||||||||||||||
Sbjct: 3181 gggccatcaaggccaagcacg 3201
to top
>ref|XM_363819.1| Magnaporthe grisea 70-15 hypothetical protein (MG01745.4) partial
           mRNA
          Length = 1389

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 424 gatgacaagtactttgctagg 444
           |||||||||||||||||||||
Sbjct: 778 gatgacaagtactttgctagg 798
to top
>emb|AJ853827.1| Uncultured methanogenic archaeon partial mcrA gene for
           methyl-coenzyme M reductase, subunit A, clone Lak21-ML
          Length = 470

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 78  catcaaggccaagcacggcgg 98
           |||||||||||||||||||||
Sbjct: 84  catcaaggccaagcacggcgg 104
to top
>gb|AC074397.7| Homo sapiens BAC clone RP11-598O8 from 7, complete sequence
          Length = 114576

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 402   caaggttaatatgcaaaagtt 422
             |||||||||||||||||||||
Sbjct: 52921 caaggttaatatgcaaaagtt 52941
to top
>gb|CP000092.1| Ralstonia eutropha JMP134 megaplasmid, complete sequence
          Length = 634917

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 109    aaggccgagaagccggccgcc 129
              |||||||||||||||||||||
Sbjct: 324800 aaggccgagaagccggccgcc 324780
to top
>gb|DQ351275.1| Streptomyces sp. NRRL 30748 meridamycin biosynthetic gene cluster and
             flanking regions
          Length = 116831

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 300   cggcctgctcctcatcactgg 320
             |||||||||||||||||||||
Sbjct: 39352 cggcctgctcctcatcactgg 39372
to top
>gb|AC159883.2| Mus musculus BAC clone RP24-490A17 from chromosome 9, complete sequence
          Length = 140400

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 363   ggcttatgtcatttccacatc 383
             |||||||||||||||||||||
Sbjct: 31594 ggcttatgtcatttccacatc 31574
to top
>gb|AC151614.2| Emiliania huxleyi clone JGIACCU-13K1, complete sequence
          Length = 42022

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 119   agccggccgccgtcgccgagcccaa 143
             ||||||||||| |||||||||||||
Sbjct: 28938 agccggccgccctcgccgagcccaa 28962
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 440      ctagggagaagaagactagggcaaa 464
                |||||||||||||||| ||||||||
Sbjct: 24939926 ctagggagaagaagacaagggcaaa 24939950
to top
>dbj|AP003541.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0530H05
          Length = 145952

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 440   ctagggagaagaagactagggcaaa 464
             |||||||||||||||| ||||||||
Sbjct: 34481 ctagggagaagaagacaagggcaaa 34505
to top
>dbj|AP004737.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0072A21
          Length = 158287

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 440    ctagggagaagaagactagggcaaa 464
              |||||||||||||||| ||||||||
Sbjct: 151009 ctagggagaagaagacaagggcaaa 151033
to top
>gb|AC161256.3| Mus musculus BAC clone RP24-70H20 from chromosome 9, complete sequence
          Length = 190832

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 363    ggcttatgtcatttccacatc 383
              |||||||||||||||||||||
Sbjct: 178351 ggcttatgtcatttccacatc 178331
to top
>gb|DQ214771.1| Taeniopygia guttata clone 0061P0023H09 ribosomal protein L6
           internal polyA variant-like mRNA, complete sequence
          Length = 950

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 218 ccatcacgccgggcacggtgctgatcctgctc 249
           ||||||| || ||||||||||| |||||||||
Sbjct: 462 ccatcacccccggcacggtgctcatcctgctc 493
to top
>gb|DQ214770.1| Taeniopygia guttata clone 0061P0025H04 ribosomal protein L6
           internal polyA variant-like mRNA, complete sequence
          Length = 959

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 218 ccatcacgccgggcacggtgctgatcctgctc 249
           ||||||| || ||||||||||| |||||||||
Sbjct: 472 ccatcacccccggcacggtgctcatcctgctc 503
to top
>gb|AC022675.7| Mus musculus chromosome 1, clone RP23-59N15, complete sequence
          Length = 181063

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 457    agggcaaagaagtctgaggg 476
              ||||||||||||||||||||
Sbjct: 146528 agggcaaagaagtctgaggg 146509
to top
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 224     cgccgggcacggtgctgatc 243
               ||||||||||||||||||||
Sbjct: 1543820 cgccgggcacggtgctgatc 1543839
to top
>gb|AY071732.1| Drosophila melanogaster RH44960 full insert cDNA
          Length = 634

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 106 cctaaggccgagaagccggccgcc 129
           ||||||||||||||||| ||||||
Sbjct: 146 cctaaggccgagaagcccgccgcc 169
to top
>gb|AC098742.4| Mus musculus BAC clone RP23-122N2 from 14, complete sequence
          Length = 218683

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 437    ttgctagggagaagaagact 456
              ||||||||||||||||||||
Sbjct: 217195 ttgctagggagaagaagact 217214
to top
>gb|AC146748.16| Medicago truncatula clone mth2-65k8, complete sequence
          Length = 113744

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 418   aagtttgatgacaagtactt 437
             ||||||||||||||||||||
Sbjct: 68015 aagtttgatgacaagtactt 68034



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 73    tgggccatcaaggccaagcacggcggcgccttccct 108
             ||||| |||||||| ||||||||||| || ||||||
Sbjct: 66299 tgggctatcaaggctaagcacggcggagctttccct 66334
to top
>emb|AL590677.7| Human DNA sequence from clone RP11-214D15 on chromosome 10 Contains the
              5' end of the gene for a novel protein (FLJ40283), a novel
              gene and two CpG islands, complete sequence
          Length = 127714

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 402    caaggttaatatgcaaaagt 421
              ||||||||||||||||||||
Sbjct: 110693 caaggttaatatgcaaaagt 110712
to top
>emb|AL355485.9| Human DNA sequence from clone RP11-240M20 on chromosome 13, complete
              sequence
          Length = 149684

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 402    caaggttaatatgcaaaagt 421
              ||||||||||||||||||||
Sbjct: 114473 caaggttaatatgcaaaagt 114492
to top
>gb|AE005744.1| Caulobacter crescentus CB15 section 70 of 359 of the complete genome
          Length = 11532

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 112  gccgagaagccggccgccgtcgcc 135
            ||||||||||||||||||| ||||
Sbjct: 7697 gccgagaagccggccgccgccgcc 7720
to top
>dbj|AK094601.1| Homo sapiens cDNA FLJ37282 fis, clone BRAMY2013216
          Length = 2669

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 402  caaggttaatatgcaaaagt 421
            ||||||||||||||||||||
Sbjct: 2549 caaggttaatatgcaaaagt 2530
to top
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 3       cccgacgtcgaagatggcgc 22
               ||||||||||||||||||||
Sbjct: 1562174 cccgacgtcgaagatggcgc 1562155
to top
>ref|NM_141282.2| Drosophila melanogaster Ribosomal protein L35A CG2099-RA (RpL35A),
           mRNA
          Length = 680

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 106 cctaaggccgagaagccggccgcc 129
           ||||||||||||||||| ||||||
Sbjct: 144 cctaaggccgagaagcccgccgcc 167
to top
>gb|AC004671.1| Homo sapiens 12p13.3 PAC RPCI3-340I3 (Roswell Park Cancer Institute
             Human PAC Library) complete sequence
          Length = 141266

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 419   agtttgatgacaagtacttt 438
             ||||||||||||||||||||
Sbjct: 99707 agtttgatgacaagtacttt 99726
to top
>gb|AC108157.3| Homo sapiens BAC clone RP11-580P21 from 4, complete sequence
          Length = 167001

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 402   caaggttaatatgcaaaagt 421
             ||||||||||||||||||||
Sbjct: 50782 caaggttaatatgcaaaagt 50763
to top
>gb|AC074349.6| Homo sapiens BAC clone RP11-703G6 from 4, complete sequence
          Length = 176467

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 402   caaggttaatatgcaaaagt 421
             ||||||||||||||||||||
Sbjct: 81340 caaggttaatatgcaaaagt 81321
to top
>gb|AY071136.1| Drosophila melanogaster RE17737 full length cDNA
          Length = 633

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 106 cctaaggccgagaagccggccgcc 129
           ||||||||||||||||| ||||||
Sbjct: 144 cctaaggccgagaagcccgccgcc 167
to top
>gb|AC069200.6| Homo sapiens BAC clone RP11-177J6 from 4, complete sequence
          Length = 148930

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 402    caaggttaatatgcaaaagt 421
              ||||||||||||||||||||
Sbjct: 146662 caaggttaatatgcaaaagt 146643
to top
>gb|AC026692.5| Homo sapiens chromosome 5 clone CTC-257L10, complete sequence
          Length = 139377

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 402    caaggttaatatgcaaaagt 421
              ||||||||||||||||||||
Sbjct: 125250 caaggttaatatgcaaaagt 125269
to top
>gb|AC035147.4| Homo sapiens chromosome 5 clone CTD-2309M13, complete sequence
          Length = 104940

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 402   caaggttaatatgcaaaagt 421
             ||||||||||||||||||||
Sbjct: 41389 caaggttaatatgcaaaagt 41370
to top
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 111     ggccgagaagccggccgccg 130
               ||||||||||||||||||||
Sbjct: 4104223 ggccgagaagccggccgccg 4104242
to top
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V,
              complete sequence
          Length = 1519138

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 328    aagatcaatggcgtgccaat 347
              ||||||||||||||||||||
Sbjct: 995815 aagatcaatggcgtgccaat 995834
to top
>gb|AC009538.4|AC009538 Drosophila melanogaster, chromosome 3R, region 83A-83A, BAC clone
             BACR24O24, complete sequence
          Length = 173927

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 106   cctaaggccgagaagccggccgcc 129
             ||||||||||||||||| ||||||
Sbjct: 10623 cctaaggccgagaagcccgccgcc 10600
to top
>gb|AC095043.3| Homo sapiens BAC clone RP11-124A7 from 4, complete sequence
          Length = 178037

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 218    ccatcacgccgggcacggtg 237
              ||||||||||||||||||||
Sbjct: 175171 ccatcacgccgggcacggtg 175190
to top
>gb|AC008190.7|AC008190 Drosophila melanogaster, chromosome 3R, region 83A-83A, BAC clone
             BACR34M23, complete sequence
          Length = 158012

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 106   cctaaggccgagaagccggccgcc 129
             ||||||||||||||||| ||||||
Sbjct: 94643 cctaaggccgagaagcccgccgcc 94620
to top
>gb|AC068282.8| Homo sapiens BAC clone RP11-314L11 from 2, complete sequence
          Length = 205342

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 402    caaggttaatatgcaaaagt 421
              ||||||||||||||||||||
Sbjct: 125976 caaggttaatatgcaaaagt 125957
to top
>gb|AC044787.6|AC044787 Homo sapiens chromosome 15 clone CTD-2270N23 map 15q21, complete
             sequence
          Length = 148147

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 402   caaggttaatatgcaaaagt 421
             ||||||||||||||||||||
Sbjct: 96939 caaggttaatatgcaaaagt 96958
to top
>gb|AC017006.4| Homo sapiens BAC clone RP11-110G2 from 2, complete sequence
          Length = 191953

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 402   caaggttaatatgcaaaagt 421
             ||||||||||||||||||||
Sbjct: 85127 caaggttaatatgcaaaagt 85108
to top
>gb|AE004558.1| Pseudomonas aeruginosa PAO1, section 119 of 529 of the complete
            genome
          Length = 9917

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 209  tcaggtcgaccatcacgccg 228
            ||||||||||||||||||||
Sbjct: 5762 tcaggtcgaccatcacgccg 5781
to top
>emb|X69378.1|MCYL16 M.crystallinum mRNA for ribosomal protein YL16
          Length = 1015

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 418 aagtttgatgacaagtactt 437
           ||||||||||||||||||||
Sbjct: 522 aagtttgatgacaagtactt 541
to top
>gb|AC154243.2| Mus musculus BAC clone RP24-173F3 from 14, complete sequence
          Length = 152254

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 437   ttgctagggagaagaagact 456
             ||||||||||||||||||||
Sbjct: 67982 ttgctagggagaagaagact 68001
to top
>ref|NM_210401.1| Eremothecium gossypii AER190Wp (AER190W), mRNA
          Length = 3036

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 328  aagatcaatggcgtgccaat 347
            ||||||||||||||||||||
Sbjct: 1282 aagatcaatggcgtgccaat 1301
to top
>gb|AE003602.4| Drosophila melanogaster chromosome 3R, section 6 of 118 of the complete
             sequence
          Length = 326091

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 106   cctaaggccgagaagccggccgcc 129
             ||||||||||||||||| ||||||
Sbjct: 55684 cctaaggccgagaagcccgccgcc 55661
to top
>gb|AC004047.1|AC004047 Homo sapiens chromosome 4 clone B150J4 map 4q25, complete sequence
          Length = 134649

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 402   caaggttaatatgcaaaagt 421
             ||||||||||||||||||||
Sbjct: 60015 caaggttaatatgcaaaagt 59996
to top
>gb|AC005394.1|AC005394 Homo sapiens chromosome 19, cosmid F8518, complete sequence
          Length = 44935

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 402  caaggttaatatgcaaaagt 421
            ||||||||||||||||||||
Sbjct: 1590 caaggttaatatgcaaaagt 1571
to top
>emb|AL354819.15| Human DNA sequence from clone RP11-7B3 on chromosome 13 Contains the 3'
              end of the gene for a novel calx-beta domain containing
              protein similar to sea urchin ECM3, a novel gene, a
              phospholipase A2 group XII (PLA2G12) pseudogene and a novel
              KIAA0565 KIAA1074 and breast cancer antigen NY-BR-1
              containing pseudogene, complete sequence
          Length = 153149

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 402    caaggttaatatgcaaaagt 421
              ||||||||||||||||||||
Sbjct: 124110 caaggttaatatgcaaaagt 124129
to top
>emb|AL365314.16| Mouse DNA sequence from clone RP23-106N23 on chromosome 1, complete
             sequence
          Length = 182054

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 457   agggcaaagaagtctgaggg 476
             ||||||||||||||||||||
Sbjct: 74874 agggcaaagaagtctgaggg 74893


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,627,589
Number of Sequences: 3902068
Number of extensions: 3627589
Number of successful extensions: 69324
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68303
Number of HSP's gapped (non-prelim): 1011
length of query: 511
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 488
effective length of database: 17,143,297,704
effective search space: 8365929279552
effective search space used: 8365929279552
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top