Clone Name | bags9h17 |
---|---|
Clone Library Name | barley_pub |
>gb|BT009285.1| Triticum aestivum clone wlm0.pk0010.f6:fis, full insert mRNA sequence Length = 1418 Score = 831 bits (419), Expect = 0.0 Identities = 516/547 (94%), Gaps = 11/547 (2%) Strand = Plus / Plus Query: 1 atctgtccgtccttgcaatgtgctgtcgcaagcttacttgtagatatacgacgagtccac 60 ||||||||||||||||||||| ||| |||||||||||| |||||| |||||||||| Sbjct: 598 atctgtccgtccttgcaatgtactggagcaagcttactt----atatactacgagtccac 653 Query: 61 atctctttgagggagatgctgaagatgcattcattcgtgtacgagacaaggtgaaagtcc 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 654 atctctttgaaggagatgctgaagatgcattcattcgtgtacgagacaaggtgaaagtcc 713 Query: 121 cattgtatggctgtgattgttatgcttatgccctcctggcttctggttttgtggatcttg 180 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 714 cattgtatggctgtgattgttatgcttatgctctcctggcttctggttttgtggatcttg 773 Query: 181 ttgtggaatctggattgaagccatatgattttctctcactggtaccggtgattgaaggag 240 |||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 774 ttgttgaatctggattgaagccatacgattttctctcgctggtaccggtgattgaaggag 833 Query: 241 ctgggggctcaataactgactgggaagggaacaagctccactggcctgtctcttcggaat 300 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 834 ctgggggctcaataactgattgggaagggaacaagctccactggcctgtctcttcggaat 893 Query: 301 ctcggccaacaagtttcaacgtggtggcagccggagattcccgtgttcatgggcaggccc 360 |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 894 ctcggccaacaagtttcaacgtggtggcagccggagattcccatgtccatgggcaggccc 953 Query: 361 tagcagcgttgcggtggcgctagcctgc----agcgccgggtggctcct---gttcattt 413 | |||||||||||||||||||||||||| ||| | ||| ||||||| |||||||| Sbjct: 954 tggcagcgttgcggtggcgctagcctgcctgcagcacggggcggctcctattgttcattt 1013 Query: 414 aaaaggctgcaactgttattcatctatccaataaaactgagtctgtacgcttccttagtg 473 | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1014 agaaggctgcaactgttattcatctatccaataaaactgagtctgtacgcttcctcagtg 1073 Query: 474 ggtaaagcaagttgttcacggtgcaccctttactcaatgatgatcagtgatttcttgttg 533 |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 1074 ggtaaagcaagttgttcacggtgcaccctttactcaataatgatcagtggtttcttgttg 1133 Query: 534 tgtgtta 540 ||||||| Sbjct: 1134 tgtgtta 1140
>ref|XM_476964.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1503 Score = 272 bits (137), Expect = 1e-69 Identities = 294/346 (84%), Gaps = 4/346 (1%) Strand = Plus / Plus Query: 1 atctgtccgtccttgcaatgtgctgtcgcaagcttacttgtagatatacgacgagtccac 60 |||||| || ||||||||||| ||| | ||||||||||| |||||| || ||||||| Sbjct: 980 atctgttcgcccttgcaatgtcctggcacaagcttactt----atatacaacaagtccac 1035 Query: 61 atctctttgagggagatgctgaagatgcattcattcgtgtacgagacaaggtgaaagtcc 120 || | |||| ||||| |||||||||||||| ||||||||||| || ||||| ||||||| Sbjct: 1036 atttgtttgcaggagaagctgaagatgcatttattcgtgtacgggataaggtcaaagtcc 1095 Query: 121 cattgtatggctgtgattgttatgcttatgccctcctggcttctggttttgtggatcttg 180 || ||||||| || ||||| ||||| ||||| || || || ||||||||||| ||||||| Sbjct: 1096 cactgtatggttgcgattgctatgcctatgctcttcttgcctctggttttgtagatcttg 1155 Query: 181 ttgtggaatctggattgaagccatatgattttctctcactggtaccggtgattgaaggag 240 |||| ||||| ||||||||||||||||||||||||||| ||||||| || |||||||||| Sbjct: 1156 ttgttgaatcaggattgaagccatatgattttctctcattggtaccagtcattgaaggag 1215 Query: 241 ctgggggctcaataactgactgggaagggaacaagctccactggcctgtctcttcggaat 300 |||| || |||||||| || ||| |||| ||||||||||| |||||||||||| |||||| Sbjct: 1216 ctggaggttcaataacagattggaaaggaaacaagctccattggcctgtctctgcggaat 1275 Query: 301 ctcggccaacaagtttcaacgtggtggcagccggagattcccgtgt 346 | ||||| ||||||||| ||||||||| | ||||| ||||||| Sbjct: 1276 cacggcctgaaagtttcaatgtggtggcatctggagacgcccgtgt 1321
>ref|XM_506210.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0003E08.17 mRNA Length = 1509 Score = 272 bits (137), Expect = 1e-69 Identities = 294/346 (84%), Gaps = 4/346 (1%) Strand = Plus / Plus Query: 1 atctgtccgtccttgcaatgtgctgtcgcaagcttacttgtagatatacgacgagtccac 60 |||||| || ||||||||||| ||| | ||||||||||| |||||| || ||||||| Sbjct: 986 atctgttcgcccttgcaatgtcctggcacaagcttactt----atatacaacaagtccac 1041 Query: 61 atctctttgagggagatgctgaagatgcattcattcgtgtacgagacaaggtgaaagtcc 120 || | |||| ||||| |||||||||||||| ||||||||||| || ||||| ||||||| Sbjct: 1042 atttgtttgcaggagaagctgaagatgcatttattcgtgtacgggataaggtcaaagtcc 1101 Query: 121 cattgtatggctgtgattgttatgcttatgccctcctggcttctggttttgtggatcttg 180 || ||||||| || ||||| ||||| ||||| || || || ||||||||||| ||||||| Sbjct: 1102 cactgtatggttgcgattgctatgcctatgctcttcttgcctctggttttgtagatcttg 1161 Query: 181 ttgtggaatctggattgaagccatatgattttctctcactggtaccggtgattgaaggag 240 |||| ||||| ||||||||||||||||||||||||||| ||||||| || |||||||||| Sbjct: 1162 ttgttgaatcaggattgaagccatatgattttctctcattggtaccagtcattgaaggag 1221 Query: 241 ctgggggctcaataactgactgggaagggaacaagctccactggcctgtctcttcggaat 300 |||| || |||||||| || ||| |||| ||||||||||| |||||||||||| |||||| Sbjct: 1222 ctggaggttcaataacagattggaaaggaaacaagctccattggcctgtctctgcggaat 1281 Query: 301 ctcggccaacaagtttcaacgtggtggcagccggagattcccgtgt 346 | ||||| ||||||||| ||||||||| | ||||| ||||||| Sbjct: 1282 cacggcctgaaagtttcaatgtggtggcatctggagacgcccgtgt 1327
>dbj|AK071379.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023095D21, full insert sequence Length = 1509 Score = 272 bits (137), Expect = 1e-69 Identities = 294/346 (84%), Gaps = 4/346 (1%) Strand = Plus / Plus Query: 1 atctgtccgtccttgcaatgtgctgtcgcaagcttacttgtagatatacgacgagtccac 60 |||||| || ||||||||||| ||| | ||||||||||| |||||| || ||||||| Sbjct: 986 atctgttcgcccttgcaatgtcctggcacaagcttactt----atatacaacaagtccac 1041 Query: 61 atctctttgagggagatgctgaagatgcattcattcgtgtacgagacaaggtgaaagtcc 120 || | |||| ||||| |||||||||||||| ||||||||||| || ||||| ||||||| Sbjct: 1042 atttgtttgcaggagaagctgaagatgcatttattcgtgtacgggataaggtcaaagtcc 1101 Query: 121 cattgtatggctgtgattgttatgcttatgccctcctggcttctggttttgtggatcttg 180 || ||||||| || ||||| ||||| ||||| || || || ||||||||||| ||||||| Sbjct: 1102 cactgtatggttgcgattgctatgcctatgctcttcttgcctctggttttgtagatcttg 1161 Query: 181 ttgtggaatctggattgaagccatatgattttctctcactggtaccggtgattgaaggag 240 |||| ||||| ||||||||||||||||||||||||||| ||||||| || |||||||||| Sbjct: 1162 ttgttgaatcaggattgaagccatatgattttctctcattggtaccagtcattgaaggag 1221 Query: 241 ctgggggctcaataactgactgggaagggaacaagctccactggcctgtctcttcggaat 300 |||| || |||||||| || ||| |||| ||||||||||| |||||||||||| |||||| Sbjct: 1222 ctggaggttcaataacagattggaaaggaaacaagctccattggcctgtctctgcggaat 1281 Query: 301 ctcggccaacaagtttcaacgtggtggcagccggagattcccgtgt 346 | ||||| ||||||||| ||||||||| | ||||| ||||||| Sbjct: 1282 cacggcctgaaagtttcaatgtggtggcatctggagacgcccgtgt 1327
>dbj|AK103440.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033129C22, full insert sequence Length = 1503 Score = 264 bits (133), Expect = 3e-67 Identities = 293/346 (84%), Gaps = 4/346 (1%) Strand = Plus / Plus Query: 1 atctgtccgtccttgcaatgtgctgtcgcaagcttacttgtagatatacgacgagtccac 60 |||||| || ||||||||| | ||| | ||||||||||| |||||| || ||||||| Sbjct: 980 atctgttcgcccttgcaatatcctggcacaagcttactt----atatacaacaagtccac 1035 Query: 61 atctctttgagggagatgctgaagatgcattcattcgtgtacgagacaaggtgaaagtcc 120 || | |||| ||||| |||||||||||||| ||||||||||| || ||||| ||||||| Sbjct: 1036 atttgtttgcaggagaagctgaagatgcatttattcgtgtacgggataaggtcaaagtcc 1095 Query: 121 cattgtatggctgtgattgttatgcttatgccctcctggcttctggttttgtggatcttg 180 || ||||||| || ||||| ||||| ||||| || || || ||||||||||| ||||||| Sbjct: 1096 cactgtatggttgcgattgctatgcctatgctcttcttgcctctggttttgtagatcttg 1155 Query: 181 ttgtggaatctggattgaagccatatgattttctctcactggtaccggtgattgaaggag 240 |||| ||||| ||||||||||||||||||||||||||| ||||||| || |||||||||| Sbjct: 1156 ttgttgaatcaggattgaagccatatgattttctctcattggtaccagtcattgaaggag 1215 Query: 241 ctgggggctcaataactgactgggaagggaacaagctccactggcctgtctcttcggaat 300 |||| || |||||||| || ||| |||| ||||||||||| |||||||||||| |||||| Sbjct: 1216 ctggaggttcaataacagattggaaaggaaacaagctccattggcctgtctctgcggaat 1275 Query: 301 ctcggccaacaagtttcaacgtggtggcagccggagattcccgtgt 346 | ||||| ||||||||| ||||||||| | ||||| ||||||| Sbjct: 1276 cacggcctgaaagtttcaatgtggtggcatctggagacgcccgtgt 1321
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 121 bits (61), Expect = 3e-24 Identities = 97/109 (88%) Strand = Plus / Plus Query: 199 agccatatgattttctctcactggtaccggtgattgaaggagctgggggctcaataactg 258 |||||||||||||||||||| ||||||| || |||||||||||||| || |||||||| | Sbjct: 4925279 agccatatgattttctctcattggtaccagtcattgaaggagctggaggttcaataacag 4925338 Query: 259 actgggaagggaacaagctccactggcctgtctcttcggaatctcggcc 307 | ||| |||| ||||||||||| |||||||||||| ||||||| ||||| Sbjct: 4925339 attggaaaggaaacaagctccattggcctgtctctgcggaatcacggcc 4925387 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Plus Query: 109 aggtgaaagtcccattgtatggctgtgattgttatgcttatgccctcctggcttctggtt 168 |||| ||||||||| ||||||| || ||||| ||||| ||||| || || || ||||||| Sbjct: 4924869 aggtcaaagtcccactgtatggttgcgattgctatgcctatgctcttcttgcctctggtt 4924928 Query: 169 ttgtggatcttgttgtggaatctggattgaag 200 |||| ||||||||||| ||||| ||||||||| Sbjct: 4924929 ttgtagatcttgttgttgaatcaggattgaag 4924960 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 42 agatatacgacgagtccacatctctttgagggagatgctgaagatgcattcattcgtgta 101 |||||||| || ||||||||| | |||| ||||| |||||||||||||| ||||||||| Sbjct: 4924701 agatatacaacaagtccacatttgtttgcaggagaagctgaagatgcatttattcgtgta 4924760 Query: 102 cgagacaaggt 112 || || ||||| Sbjct: 4924761 cgggataaggt 4924771 Score = 44.1 bits (22), Expect = 0.54 Identities = 37/42 (88%) Strand = Plus / Plus Query: 1 atctgtccgtccttgcaatgtgctgtcgcaagcttacttgta 42 |||||| || ||||||||||| ||| | |||||||||||||| Sbjct: 4924302 atctgttcgcccttgcaatgtcctggcacaagcttacttgta 4924343
>dbj|AP005173.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0003E08 Length = 161095 Score = 121 bits (61), Expect = 3e-24 Identities = 97/109 (88%) Strand = Plus / Plus Query: 199 agccatatgattttctctcactggtaccggtgattgaaggagctgggggctcaataactg 258 |||||||||||||||||||| ||||||| || |||||||||||||| || |||||||| | Sbjct: 110763 agccatatgattttctctcattggtaccagtcattgaaggagctggaggttcaataacag 110822 Query: 259 actgggaagggaacaagctccactggcctgtctcttcggaatctcggcc 307 | ||| |||| ||||||||||| |||||||||||| ||||||| ||||| Sbjct: 110823 attggaaaggaaacaagctccattggcctgtctctgcggaatcacggcc 110871 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Plus Query: 109 aggtgaaagtcccattgtatggctgtgattgttatgcttatgccctcctggcttctggtt 168 |||| ||||||||| ||||||| || ||||| ||||| ||||| || || || ||||||| Sbjct: 110353 aggtcaaagtcccactgtatggttgcgattgctatgcctatgctcttcttgcctctggtt 110412 Query: 169 ttgtggatcttgttgtggaatctggattgaag 200 |||| ||||||||||| ||||| ||||||||| Sbjct: 110413 ttgtagatcttgttgttgaatcaggattgaag 110444 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 42 agatatacgacgagtccacatctctttgagggagatgctgaagatgcattcattcgtgta 101 |||||||| || ||||||||| | |||| ||||| |||||||||||||| ||||||||| Sbjct: 110185 agatatacaacaagtccacatttgtttgcaggagaagctgaagatgcatttattcgtgta 110244 Query: 102 cgagacaaggt 112 || || ||||| Sbjct: 110245 cgggataaggt 110255 Score = 44.1 bits (22), Expect = 0.54 Identities = 37/42 (88%) Strand = Plus / Plus Query: 1 atctgtccgtccttgcaatgtgctgtcgcaagcttacttgta 42 |||||| || ||||||||||| ||| | |||||||||||||| Sbjct: 109786 atctgttcgcccttgcaatgtcctggcacaagcttacttgta 109827
>ref|NM_120072.2| Arabidopsis thaliana 3'(2'),5'-bisphosphate nucleotidase/ inositol or phosphatidylinositol phosphatase AT4G39120 mRNA, complete cds Length = 1047 Score = 105 bits (53), Expect = 2e-19 Identities = 95/109 (87%) Strand = Plus / Plus Query: 103 gagacaaggtgaaagtcccattgtatggctgtgattgttatgcttatgccctcctggctt 162 |||||||||||||||| || || || |||||||||||||||||||| || |||||||||| Sbjct: 767 gagacaaggtgaaagtgcccttatacggctgtgattgttatgcttacgctctcctggctt 826 Query: 163 ctggttttgtggatcttgttgtggaatctggattgaagccatatgattt 211 |||| ||||| ||||||||| | ||||| || | |||||||||||||| Sbjct: 827 ctggatttgtcgatcttgttattgaatccggtctaaagccatatgattt 875
>gb|BT010891.1| Arabidopsis thaliana At4g39120 gene, complete cds Length = 1041 Score = 105 bits (53), Expect = 2e-19 Identities = 95/109 (87%) Strand = Plus / Plus Query: 103 gagacaaggtgaaagtcccattgtatggctgtgattgttatgcttatgccctcctggctt 162 |||||||||||||||| || || || |||||||||||||||||||| || |||||||||| Sbjct: 761 gagacaaggtgaaagtgcccttatacggctgtgattgttatgcttacgctctcctggctt 820 Query: 163 ctggttttgtggatcttgttgtggaatctggattgaagccatatgattt 211 |||| ||||| ||||||||| | ||||| || | |||||||||||||| Sbjct: 821 ctggatttgtcgatcttgttattgaatccggtctaaagccatatgattt 869
>dbj|AK220687.1| Arabidopsis thaliana mRNA for Inositol monophosphatase - like protein, complete cds, clone: RAFL21-86-H16 Length = 1380 Score = 105 bits (53), Expect = 2e-19 Identities = 95/109 (87%) Strand = Plus / Plus Query: 103 gagacaaggtgaaagtcccattgtatggctgtgattgttatgcttatgccctcctggctt 162 |||||||||||||||| || || || |||||||||||||||||||| || |||||||||| Sbjct: 789 gagacaaggtgaaagtgcccttatacggctgtgattgttatgcttacgctctcctggctt 848 Query: 163 ctggttttgtggatcttgttgtggaatctggattgaagccatatgattt 211 |||| ||||| ||||||||| | ||||| || | |||||||||||||| Sbjct: 849 ctggatttgtcgatcttgttattgaatccggtctaaagccatatgattt 897
>emb|BX842348.1|CNS0A3SI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH67ZC09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1417 Score = 105 bits (53), Expect = 2e-19 Identities = 95/109 (87%) Strand = Plus / Plus Query: 103 gagacaaggtgaaagtcccattgtatggctgtgattgttatgcttatgccctcctggctt 162 |||||||||||||||| || || || |||||||||||||||||||| || |||||||||| Sbjct: 766 gagacaaggtgaaagtgcccttatacggctgtgattgttatgcttacgctctcctggctt 825 Query: 163 ctggttttgtggatcttgttgtggaatctggattgaagccatatgattt 211 |||| ||||| ||||||||| | ||||| || | |||||||||||||| Sbjct: 826 ctggatttgtcgatcttgttattgaatccggtctaaagccatatgattt 874
>dbj|AK176630.1| Arabidopsis thaliana mRNA for Inositol monophosphatase - like protein, partial cds, clone: RAFL25-16-P15 Length = 1543 Score = 105 bits (53), Expect = 2e-19 Identities = 95/109 (87%) Strand = Plus / Plus Query: 103 gagacaaggtgaaagtcccattgtatggctgtgattgttatgcttatgccctcctggctt 162 |||||||||||||||| || || || |||||||||||||||||||| || |||||||||| Sbjct: 725 gagacaaggtgaaagtgcccttatacggctgtgattgttatgcttacgctctcctggctt 784 Query: 163 ctggttttgtggatcttgttgtggaatctggattgaagccatatgattt 211 |||| ||||| ||||||||| | ||||| || | |||||||||||||| Sbjct: 785 ctggatttgtcgatcttgttattgaatccggtctaaagccatatgattt 833
>dbj|AK175533.1| Arabidopsis thaliana mRNA for inositol monophosphatase - like protein, complete cds, clone: RAFL21-95-B18 Length = 1380 Score = 105 bits (53), Expect = 2e-19 Identities = 95/109 (87%) Strand = Plus / Plus Query: 103 gagacaaggtgaaagtcccattgtatggctgtgattgttatgcttatgccctcctggctt 162 |||||||||||||||| || || || |||||||||||||||||||| || |||||||||| Sbjct: 789 gagacaaggtgaaagtgcccttatacggctgtgattgttatgcttacgctctcctggctt 848 Query: 163 ctggttttgtggatcttgttgtggaatctggattgaagccatatgattt 211 |||| ||||| ||||||||| | ||||| || | |||||||||||||| Sbjct: 849 ctggatttgtcgatcttgttattgaatccggtctaaagccatatgattt 897
>dbj|AK118971.1| Arabidopsis thaliana At4g39120 mRNA for putative Inositol monophosphatase, complete cds, clone: RAFL21-30-L04 Length = 1541 Score = 105 bits (53), Expect = 2e-19 Identities = 95/109 (87%) Strand = Plus / Plus Query: 103 gagacaaggtgaaagtcccattgtatggctgtgattgttatgcttatgccctcctggctt 162 |||||||||||||||| || || || |||||||||||||||||||| || |||||||||| Sbjct: 725 gagacaaggtgaaagtgcccttatacggctgtgattgttatgcttacgctctcctggctt 784 Query: 163 ctggttttgtggatcttgttgtggaatctggattgaagccatatgattt 211 |||| ||||| ||||||||| | ||||| || | |||||||||||||| Sbjct: 785 ctggatttgtcgatcttgttattgaatccggtctaaagccatatgattt 833
>emb|BX841512.1|CNS09YHJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB14ZE08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1084 Score = 97.6 bits (49), Expect = 4e-17 Identities = 94/109 (86%) Strand = Plus / Plus Query: 103 gagacaaggtgaaagtcccattgtatggctgtgattgttatgcttatgccctcctggctt 162 ||||||| |||||||| || || || |||||||||||||||||||| || |||||||||| Sbjct: 804 gagacaatgtgaaagtgcccttatacggctgtgattgttatgcttacgctctcctggctt 863 Query: 163 ctggttttgtggatcttgttgtggaatctggattgaagccatatgattt 211 |||| ||||| ||||||||| | ||||| || | |||||||||||||| Sbjct: 864 ctggatttgtcgatcttgttattgaatccggtctaaagccatatgattt 912
>emb|AL161594.2|ATCHRIV90 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 90 Length = 198987 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 109 aggtgaaagtcccattgtatggctgtgattgttatgcttatgccctcctggcttctggtt 168 |||||||||| || || || |||||||||||||||||||| || |||||||||||||| | Sbjct: 140256 aggtgaaagtgcccttatacggctgtgattgttatgcttacgctctcctggcttctggat 140197 Query: 169 ttgtggatcttgtt 182 |||| ||||||||| Sbjct: 140196 ttgtcgatcttgtt 140183
>emb|AL050351.1|ATT22F8 Arabidopsis thaliana DNA chromosome 4, BAC clone T22F8 (ESSA project) Length = 89035 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 109 aggtgaaagtcccattgtatggctgtgattgttatgcttatgccctcctggcttctggtt 168 |||||||||| || || || |||||||||||||||||||| || |||||||||||||| | Sbjct: 8792 aggtgaaagtgcccttatacggctgtgattgttatgcttacgctctcctggcttctggat 8733 Query: 169 ttgtggatcttgtt 182 |||| ||||||||| Sbjct: 8732 ttgtcgatcttgtt 8719
>gb|AC140722.11| Medicago truncatula clone mth2-14e20, complete sequence Length = 97982 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 120 ccattgtatggctgtgattgttatgcttatgccctcctggcttctggttttgtggatctt 179 ||||| ||||| |||||||| ||||| ||||| ||| || |||||||||||||||||||| Sbjct: 83916 ccattatatggttgtgattgctatgcatatgctctcttgtcttctggttttgtggatctt 83975 Query: 180 gt 181 || Sbjct: 83976 gt 83977
>gb|AC091172.11| Homo sapiens chromosome 17, clone RP11-156E6, complete sequence Length = 178345 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 395 gggtggctcctgttcatttaaa 416 |||||||||||||||||||||| Sbjct: 45220 gggtggctcctgttcatttaaa 45199
>gb|AY338373.1| Hordeum chilense clone 9 cultivar H7 gamma 3 hordein mRNA, partial cds Length = 838 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 ttgtggatcttgttgtggaa 188 |||||||||||||||||||| Sbjct: 233 ttgtggatcttgttgtggaa 214
>gb|AY338372.1| Hordeum chilense clone 8 cultivar H7 gamma 3 hordein mRNA, partial cds Length = 722 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 ttgtggatcttgttgtggaa 188 |||||||||||||||||||| Sbjct: 117 ttgtggatcttgttgtggaa 98
>gb|AY338371.1| Hordeum chilense clone 7 cultivar H7 gamma 3 hordein mRNA, partial cds Length = 838 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 ttgtggatcttgttgtggaa 188 |||||||||||||||||||| Sbjct: 233 ttgtggatcttgttgtggaa 214
>gb|AY338370.1| Hordeum chilense clone 6 cultivar H1 gamma 3 hordein mRNA, complete cds Length = 1030 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 ttgtggatcttgttgtggaa 188 |||||||||||||||||||| Sbjct: 234 ttgtggatcttgttgtggaa 215
>gb|AY338369.1| Hordeum chilense clone 5 cultivar H1 gamma 3 hordein mRNA, complete cds Length = 1029 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 ttgtggatcttgttgtggaa 188 |||||||||||||||||||| Sbjct: 234 ttgtggatcttgttgtggaa 215
>gb|AY338368.1| Hordeum chilense clone 4 cultivar H1 gamma 3 hordein mRNA, complete cds Length = 1028 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 ttgtggatcttgttgtggaa 188 |||||||||||||||||||| Sbjct: 234 ttgtggatcttgttgtggaa 215
>gb|AY338367.1| Hordeum chilense clone 3 cultivar H1 gamma 3 hordein mRNA, complete cds Length = 1030 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 ttgtggatcttgttgtggaa 188 |||||||||||||||||||| Sbjct: 234 ttgtggatcttgttgtggaa 215
>gb|AY338366.1| Hordeum chilense clone 2 cultivar H1 gamma 3 hordein mRNA, complete cds Length = 1030 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 ttgtggatcttgttgtggaa 188 |||||||||||||||||||| Sbjct: 234 ttgtggatcttgttgtggaa 215
>gb|AY338365.1| Hordeum chilense clone 1 cultivar H1 gamma 3 hordein mRNA, complete cds Length = 1024 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 ttgtggatcttgttgtggaa 188 |||||||||||||||||||| Sbjct: 234 ttgtggatcttgttgtggaa 215
>emb|AL390785.15| Human DNA sequence from clone RP11-325N9 on chromosome 10, complete sequence Length = 203169 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 154 tcctggcttctggttttgtggatcttgt 181 ||||||||||||||||| ||||||||| Sbjct: 102755 tcctggcttctggtttttgggatcttgt 102728
>gb|AC074140.5| Homo sapiens chromosome 19 clone LLNLF-18A12, complete sequence Length = 37049 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 ctggttttgtggatcttgtt 182 |||||||||||||||||||| Sbjct: 17701 ctggttttgtggatcttgtt 17682
>gb|AC093914.3| Homo sapiens BAC clone RP11-779N9 from 4, complete sequence Length = 170536 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 tgttattcatctatccaata 446 |||||||||||||||||||| Sbjct: 76471 tgttattcatctatccaata 76490
>ref|XM_687821.1| PREDICTED: Danio rerio hypothetical protein LOC564488 (LOC564488), mRNA Length = 820 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 aacaagtttcaacgtggtgg 327 |||||||||||||||||||| Sbjct: 110 aacaagtttcaacgtggtgg 129
>gb|AC009996.7|AC009996 Homo sapiens chromosome 15 clone RP11-151N17 map 15q15, complete sequence Length = 162495 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 aagccatatgattttctctc 217 |||||||||||||||||||| Sbjct: 4902 aagccatatgattttctctc 4883
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 ccatatgattttctctcact 220 |||||||||||||||||||| Sbjct: 12333367 ccatatgattttctctcact 12333348
>dbj|AP003511.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0578B12 Length = 151192 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 ccatatgattttctctcact 220 |||||||||||||||||||| Sbjct: 49827 ccatatgattttctctcact 49808
>dbj|AK173460.1| Ciona intestinalis cDNA, clone:cieg014e18, full insert sequence Length = 2169 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 cattcgtgtacgagacaaggtgaa 115 |||||||| ||||||||||||||| Sbjct: 384 cattcgtgaacgagacaaggtgaa 407
>emb|BX784029.5| Zebrafish DNA sequence from clone DKEY-21H14 in linkage group 4, complete sequence Length = 219903 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 aacaagtttcaacgtggtgg 327 |||||||||||||||||||| Sbjct: 32856 aacaagtttcaacgtggtgg 32875 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,923,125 Number of Sequences: 3902068 Number of extensions: 4923125 Number of successful extensions: 86628 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 37 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 86534 Number of HSP's gapped (non-prelim): 89 length of query: 618 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 595 effective length of database: 17,143,297,704 effective search space: 10200262133880 effective search space used: 10200262133880 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)