ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags9h03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NHX5_ARATH (Q8S396) Sodium/hydrogen exchanger 5 (Na(+)/H(+) exch... 123 9e-30
2NHX6_ARATH (Q8RWU6) Sodium/hydrogen exchanger 6 (Na(+)/H(+) exch... 116 3e-28
3SL9A9_MOUSE (Q8BZ00) Sodium/hydrogen exchanger 9 (Na(+)/H(+) exc... 31 2.9
4SL9A9_HUMAN (Q8IVB4) Sodium/hydrogen exchanger 9 (Na(+)/H(+) exc... 31 2.9
5NIFB_RHILT (P24427) FeMo cofactor biosynthesis protein nifB 30 4.9
6SL9A7_HUMAN (Q96T83) Sodium/hydrogen exchanger 7 (Na(+)/H(+) exc... 30 6.5
7SL9A7_MOUSE (Q8BLV3) Sodium/hydrogen exchanger 7 (Na(+)/H(+) exc... 30 6.5

>NHX5_ARATH (Q8S396) Sodium/hydrogen exchanger 5 (Na(+)/H(+) exchanger 5)|
           (NHE-5)
          Length = 517

 Score =  123 bits (308), Expect(2) = 9e-30
 Identities = 66/132 (50%), Positives = 88/132 (66%), Gaps = 10/132 (7%)
 Frame = +2

Query: 80  KALCFSGLRGAMAFALALQSVHELPEGHGKXXXXXXXXXXXXXXXXXXXXXXXMLEALDV 259
           KAL +SGLRGAMAFALALQS+H+LPEGHG+                       MLEAL+V
Sbjct: 378 KALWYSGLRGAMAFALALQSLHDLPEGHGQIIFTATTTIVVVTVLLIGGSTGKMLEALEV 437

Query: 260 IGD--ENTSIETYED-NNGYIPPTY-------EEGTSSGGGLRMKLKEFHKSTTSFTALD 409
           +GD  +++  E +E+ ++ Y+PP +       E+ +SSG   +MKLKEFHK+TTSFTALD
Sbjct: 438 VGDDLDDSMSEGFEESDHQYVPPPFSIGASSDEDTSSSGSRFKMKLKEFHKTTTSFTALD 497

Query: 410 KNYLTPFFTSQT 445
           KN+LTPFFT+ +
Sbjct: 498 KNFLTPFFTTNS 509



 Score = 26.9 bits (58), Expect(2) = 9e-30
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +3

Query: 6   NVFSCAYLVNISRPXTSAYTSKSPXRLFVS 95
           NVF CAYLVN+ R        K    L+ S
Sbjct: 354 NVFGCAYLVNLFRQENQKIPMKHQKALWYS 383



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>NHX6_ARATH (Q8RWU6) Sodium/hydrogen exchanger 6 (Na(+)/H(+) exchanger 6)|
           (NHE-6)
          Length = 535

 Score =  116 bits (291), Expect(2) = 3e-28
 Identities = 65/123 (52%), Positives = 79/123 (64%), Gaps = 3/123 (2%)
 Frame = +2

Query: 80  KALCFSGLRGAMAFALALQSVHELPEGHGKXXXXXXXXXXXXXXXXXXXXXXXMLEALDV 259
           KAL +SGLRGAMAFALALQSVH+LPEGHG+                       MLEAL+V
Sbjct: 382 KALWYSGLRGAMAFALALQSVHDLPEGHGQTIFTATTAIVVLTVLLIGGSTGTMLEALEV 441

Query: 260 IGD-ENTSI-ETYE-DNNGYIPPTYEEGTSSGGGLRMKLKEFHKSTTSFTALDKNYLTPF 430
           +GD  +TS+ + +E  N+ Y+    +E T  G G R KL+EFHKS  SFT LD+NYLTPF
Sbjct: 442 VGDSHDTSLGDGFEVVNSRYMTSYDDEDTPPGSGFRTKLREFHKSAASFTELDRNYLTPF 501

Query: 431 FTS 439
           FTS
Sbjct: 502 FTS 504



 Score = 28.5 bits (62), Expect(2) = 3e-28
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = +3

Query: 3   SNVFSCAYLVNISRP 47
           +NVF C YLVN++RP
Sbjct: 357 ANVFGCGYLVNLARP 371



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>SL9A9_MOUSE (Q8BZ00) Sodium/hydrogen exchanger 9 (Na(+)/H(+) exchanger 9)|
           (NHE-9) (Solute carrier family 9 member 9)
          Length = 644

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 13/24 (54%), Positives = 19/24 (79%)
 Frame = +2

Query: 86  LCFSGLRGAMAFALALQSVHELPE 157
           + FSGLRGA+AFALA+++    P+
Sbjct: 435 MMFSGLRGAIAFALAIRNTESQPK 458



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>SL9A9_HUMAN (Q8IVB4) Sodium/hydrogen exchanger 9 (Na(+)/H(+) exchanger 9)|
           (NHE-9) (Solute carrier family 9 member 9)
          Length = 645

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 13/24 (54%), Positives = 19/24 (79%)
 Frame = +2

Query: 86  LCFSGLRGAMAFALALQSVHELPE 157
           + FSGLRGA+AFALA+++    P+
Sbjct: 435 MMFSGLRGAIAFALAIRNTESQPK 458



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>NIFB_RHILT (P24427) FeMo cofactor biosynthesis protein nifB|
          Length = 490

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 13/50 (26%), Positives = 25/50 (50%)
 Frame = -1

Query: 249 ASNMVPVDPPIRRTVKTTMAVVAVNIVFPCPSGSSCTDWRASAKAMAPLS 100
           AS+ +  D  +RR +     V  +++V     G +C DWR +   + P++
Sbjct: 96  ASHRLTPDQALRRAIAVANEVPQLSVVGIAGPGDACYDWRKTKATLIPIA 145



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>SL9A7_HUMAN (Q96T83) Sodium/hydrogen exchanger 7 (Na(+)/H(+) exchanger 7)|
           (NHE-7) (Solute carrier family 9 member 7)
          Length = 725

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 13/17 (76%), Positives = 16/17 (94%)
 Frame = +2

Query: 86  LCFSGLRGAMAFALALQ 136
           + FSGLRGAMAFALA++
Sbjct: 483 MMFSGLRGAMAFALAIR 499



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>SL9A7_MOUSE (Q8BLV3) Sodium/hydrogen exchanger 7 (Na(+)/H(+) exchanger 7)|
           (NHE-7) (Solute carrier family 9 member 7)
          Length = 726

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 13/17 (76%), Positives = 16/17 (94%)
 Frame = +2

Query: 86  LCFSGLRGAMAFALALQ 136
           + FSGLRGAMAFALA++
Sbjct: 484 MMFSGLRGAMAFALAIR 500


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,584,038
Number of Sequences: 219361
Number of extensions: 1792330
Number of successful extensions: 4640
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4529
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6370891296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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