Clone Name | bags9h03 |
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Clone Library Name | barley_pub |
>NHX5_ARATH (Q8S396) Sodium/hydrogen exchanger 5 (Na(+)/H(+) exchanger 5)| (NHE-5) Length = 517 Score = 123 bits (308), Expect(2) = 9e-30 Identities = 66/132 (50%), Positives = 88/132 (66%), Gaps = 10/132 (7%) Frame = +2 Query: 80 KALCFSGLRGAMAFALALQSVHELPEGHGKXXXXXXXXXXXXXXXXXXXXXXXMLEALDV 259 KAL +SGLRGAMAFALALQS+H+LPEGHG+ MLEAL+V Sbjct: 378 KALWYSGLRGAMAFALALQSLHDLPEGHGQIIFTATTTIVVVTVLLIGGSTGKMLEALEV 437 Query: 260 IGD--ENTSIETYED-NNGYIPPTY-------EEGTSSGGGLRMKLKEFHKSTTSFTALD 409 +GD +++ E +E+ ++ Y+PP + E+ +SSG +MKLKEFHK+TTSFTALD Sbjct: 438 VGDDLDDSMSEGFEESDHQYVPPPFSIGASSDEDTSSSGSRFKMKLKEFHKTTTSFTALD 497 Query: 410 KNYLTPFFTSQT 445 KN+LTPFFT+ + Sbjct: 498 KNFLTPFFTTNS 509 Score = 26.9 bits (58), Expect(2) = 9e-30 Identities = 13/30 (43%), Positives = 15/30 (50%) Frame = +3 Query: 6 NVFSCAYLVNISRPXTSAYTSKSPXRLFVS 95 NVF CAYLVN+ R K L+ S Sbjct: 354 NVFGCAYLVNLFRQENQKIPMKHQKALWYS 383
>NHX6_ARATH (Q8RWU6) Sodium/hydrogen exchanger 6 (Na(+)/H(+) exchanger 6)| (NHE-6) Length = 535 Score = 116 bits (291), Expect(2) = 3e-28 Identities = 65/123 (52%), Positives = 79/123 (64%), Gaps = 3/123 (2%) Frame = +2 Query: 80 KALCFSGLRGAMAFALALQSVHELPEGHGKXXXXXXXXXXXXXXXXXXXXXXXMLEALDV 259 KAL +SGLRGAMAFALALQSVH+LPEGHG+ MLEAL+V Sbjct: 382 KALWYSGLRGAMAFALALQSVHDLPEGHGQTIFTATTAIVVLTVLLIGGSTGTMLEALEV 441 Query: 260 IGD-ENTSI-ETYE-DNNGYIPPTYEEGTSSGGGLRMKLKEFHKSTTSFTALDKNYLTPF 430 +GD +TS+ + +E N+ Y+ +E T G G R KL+EFHKS SFT LD+NYLTPF Sbjct: 442 VGDSHDTSLGDGFEVVNSRYMTSYDDEDTPPGSGFRTKLREFHKSAASFTELDRNYLTPF 501 Query: 431 FTS 439 FTS Sbjct: 502 FTS 504 Score = 28.5 bits (62), Expect(2) = 3e-28 Identities = 10/15 (66%), Positives = 13/15 (86%) Frame = +3 Query: 3 SNVFSCAYLVNISRP 47 +NVF C YLVN++RP Sbjct: 357 ANVFGCGYLVNLARP 371
>SL9A9_MOUSE (Q8BZ00) Sodium/hydrogen exchanger 9 (Na(+)/H(+) exchanger 9)| (NHE-9) (Solute carrier family 9 member 9) Length = 644 Score = 31.2 bits (69), Expect = 2.9 Identities = 13/24 (54%), Positives = 19/24 (79%) Frame = +2 Query: 86 LCFSGLRGAMAFALALQSVHELPE 157 + FSGLRGA+AFALA+++ P+ Sbjct: 435 MMFSGLRGAIAFALAIRNTESQPK 458
>SL9A9_HUMAN (Q8IVB4) Sodium/hydrogen exchanger 9 (Na(+)/H(+) exchanger 9)| (NHE-9) (Solute carrier family 9 member 9) Length = 645 Score = 31.2 bits (69), Expect = 2.9 Identities = 13/24 (54%), Positives = 19/24 (79%) Frame = +2 Query: 86 LCFSGLRGAMAFALALQSVHELPE 157 + FSGLRGA+AFALA+++ P+ Sbjct: 435 MMFSGLRGAIAFALAIRNTESQPK 458
>NIFB_RHILT (P24427) FeMo cofactor biosynthesis protein nifB| Length = 490 Score = 30.4 bits (67), Expect = 4.9 Identities = 13/50 (26%), Positives = 25/50 (50%) Frame = -1 Query: 249 ASNMVPVDPPIRRTVKTTMAVVAVNIVFPCPSGSSCTDWRASAKAMAPLS 100 AS+ + D +RR + V +++V G +C DWR + + P++ Sbjct: 96 ASHRLTPDQALRRAIAVANEVPQLSVVGIAGPGDACYDWRKTKATLIPIA 145
>SL9A7_HUMAN (Q96T83) Sodium/hydrogen exchanger 7 (Na(+)/H(+) exchanger 7)| (NHE-7) (Solute carrier family 9 member 7) Length = 725 Score = 30.0 bits (66), Expect = 6.5 Identities = 13/17 (76%), Positives = 16/17 (94%) Frame = +2 Query: 86 LCFSGLRGAMAFALALQ 136 + FSGLRGAMAFALA++ Sbjct: 483 MMFSGLRGAMAFALAIR 499
>SL9A7_MOUSE (Q8BLV3) Sodium/hydrogen exchanger 7 (Na(+)/H(+) exchanger 7)| (NHE-7) (Solute carrier family 9 member 7) Length = 726 Score = 30.0 bits (66), Expect = 6.5 Identities = 13/17 (76%), Positives = 16/17 (94%) Frame = +2 Query: 86 LCFSGLRGAMAFALALQ 136 + FSGLRGAMAFALA++ Sbjct: 484 MMFSGLRGAMAFALAIR 500 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,584,038 Number of Sequences: 219361 Number of extensions: 1792330 Number of successful extensions: 4640 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 4113 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4529 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6370891296 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)