Clone Information

BLAST Search Result

Clone Name	bags9h02
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PGTA_PONPY (Q5NVK5) Geranylgeranyl transferase type-2 alpha subu...	129	5e-30
2	PGTA_HUMAN (Q92696) Geranylgeranyl transferase type-2 alpha subu...	129	5e-30
3	PGTA_RAT (Q08602) Geranylgeranyl transferase type-2 alpha subuni...	126	4e-29
4	PGTA_MOUSE (Q9JHK4) Geranylgeranyl transferase type-2 alpha subu...	125	1e-28
5	BET4_CANAL (O93829) Geranylgeranyl transferase type-2 alpha subu...	124	1e-28
6	BET4_YEAST (Q00618) Geranylgeranyl transferase type-2 alpha subu...	105	1e-22
7	PFTA_PEA (O24304) Protein farnesyltransferase/geranylgeranyltran...	85	1e-16
8	PFTA_LYCES (P93227) Protein farnesyltransferase/geranylgeranyltr...	81	2e-15
9	RAM2_YEAST (P29703) Protein farnesyltransferase/geranylgeranyltr...	80	5e-15
10	PFTA_ARATH (Q9LX33) Protein farnesyltransferase/geranylgeranyltr...	79	8e-15
11	PFTA_MOUSE (Q61239) Protein farnesyltransferase/geranylgeranyltr...	75	1e-13
12	PFTA_BOVIN (P29702) Protein farnesyltransferase/geranylgeranyltr...	74	2e-13
13	PFTA_RAT (Q04631) Protein farnesyltransferase/geranylgeranyltran...	74	2e-13
14	PFTA_HUMAN (P49354) Protein farnesyltransferase/geranylgeranyltr...	74	2e-13
15	PFTA_SCHPO (O60052) Protein farnesyltransferase/geranylgeranyltr...	69	6e-12
16	RAM2_CANAL (Q9Y765) Protein farnesyltransferase/geranylgeranyltr...	59	9e-09
17	UBP11_YEAST (P36026) Ubiquitin carboxyl-terminal hydrolase 11 (E...	33	0.38
18	SYV_EHRCJ (Q3YT16) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--t...	32	1.5
19	SKIL_PONPY (Q5R431) Ski-like protein (Ski-related protein)	31	1.9
20	SKIL_HUMAN (P12757) Ski-like protein (Ski-related protein) (Ski-...	31	1.9
21	DSBD_YERPE (Q8ZIY9) Thiol:disulfide interchange protein dsbD pre...	31	2.5
22	SYM_PROAC (Q6A707) Methionyl-tRNA synthetase (EC 6.1.1.10) (Meth...	30	3.3
23	RNC_OCEIH (Q8ER05) Ribonuclease III (EC 3.1.26.3) (RNase III)	30	3.3
24	NUDT8_ARATH (Q8L7W2) Nudix hydrolase 8 (EC 3.6.1.-) (AtNUDT8)	30	4.3
25	YKR6_YEAST (P34239) Hypothetical 93.4 kDa protein in STE3-GIN10 ...	30	4.3
26	SPC98_DICDI (Q95ZG4) Spindle pole body component 98 (Spc98) (DdS...	29	7.3
27	BLAB_STRCI (P33652) Beta-lactamase regulatory protein blaB	29	7.3
28	ANR50_HUMAN (Q9ULJ7) Ankyrin repeat domain-containing protein 50	29	7.3
29	VE1_HPV15 (Q05135) Replication protein E1 (EC 3.6.1.-) (ATP-depe...	29	9.5

>PGTA_PONPY (Q5NVK5) Geranylgeranyl transferase type-2 alpha subunit (EC|
           2.5.1.60) (Geranylgeranyl transferase type II alpha
           subunit) (Rab geranylgeranyltransferase alpha subunit)
           (Rab geranyl-geranyltransferase alpha subunit) (Rab GG
           transferase alpha) (
          Length = 567

 Score =  129 bits (324), Expect = 5e-30
 Identities = 70/148 (47%), Positives = 90/148 (60%)
 Frame = +2

Query: 86  EEALGLSFKLLEINPEAYTAWNYRKLALQHNLKELSDPEAIKSSVDAELRVVELALRQNP 265
           E  L L+ ++L  NP+  T WN R+  LQ  L+    PE + + V AEL  +E  LR NP
Sbjct: 46  ESVLELTSQILGANPDFATLWNCRREVLQQ-LETQKSPEELAALVKAELGFLESCLRVNP 104

Query: 266 KSYGAWYHRKWLLNQKLAPVDFKREYGLLDKLLKVDARNFHGWNYRRFLAKFMGVPEEKE 445
           KSYG W+HR WLL +   P ++ RE  L  + L+VD RNFH W+YRRF+A    VP  +E
Sbjct: 105 KSYGTWHHRCWLLGRLPEP-NWTRELELCARFLEVDERNFHCWDYRRFVATQAAVPPAEE 163

Query: 446 LQYTMDKIGENFSNYSAWHNRSILLSNL 529
           L +T   I  NFSNYS+WH RS LL  L
Sbjct: 164 LAFTDSLITRNFSNYSSWHYRSCLLPQL 191



 Score = 35.4 bits (80), Expect = 0.10
 Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
 Frame = +2

Query: 89  EALGLSFKLLEINPEAYTAWNYRKLAL-QHNLKELSDPEAI--KSSVDAELRVVELALRQ 259
           E L  +  L+  N   Y++W+YR   L Q + +  S P+    +  +  EL +V+ A   
Sbjct: 162 EELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPEDVLLKELELVQNAFFT 221

Query: 260 NPKSYGAWYHRKWLLNQ 310
           +P    AW++ +WLL +
Sbjct: 222 DPNDQSAWFYHRWLLGR 238

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>PGTA_HUMAN (Q92696) Geranylgeranyl transferase type-2 alpha subunit (EC|
           2.5.1.60) (Geranylgeranyl transferase type II alpha
           subunit) (Rab geranylgeranyltransferase alpha subunit)
           (Rab geranyl-geranyltransferase alpha subunit) (Rab GG
           transferase alpha) (
          Length = 567

 Score =  129 bits (324), Expect = 5e-30
 Identities = 70/148 (47%), Positives = 90/148 (60%)
 Frame = +2

Query: 86  EEALGLSFKLLEINPEAYTAWNYRKLALQHNLKELSDPEAIKSSVDAELRVVELALRQNP 265
           E  L L+ ++L  NP+  T WN R+  LQ  L+    PE + + V AEL  +E  LR NP
Sbjct: 46  ESVLELTSQILGANPDFATLWNCRREVLQQ-LETQKSPEELAALVKAELGFLESCLRVNP 104

Query: 266 KSYGAWYHRKWLLNQKLAPVDFKREYGLLDKLLKVDARNFHGWNYRRFLAKFMGVPEEKE 445
           KSYG W+HR WLL +   P ++ RE  L  + L+VD RNFH W+YRRF+A    VP  +E
Sbjct: 105 KSYGTWHHRCWLLGRLPEP-NWTRELELCARFLEVDERNFHCWDYRRFVATQAAVPPAEE 163

Query: 446 LQYTMDKIGENFSNYSAWHNRSILLSNL 529
           L +T   I  NFSNYS+WH RS LL  L
Sbjct: 164 LAFTDSLITRNFSNYSSWHYRSCLLPQL 191



 Score = 35.4 bits (80), Expect = 0.10
 Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
 Frame = +2

Query: 89  EALGLSFKLLEINPEAYTAWNYRKLAL-QHNLKELSDPEAI--KSSVDAELRVVELALRQ 259
           E L  +  L+  N   Y++W+YR   L Q + +  S P+    +  +  EL +V+ A   
Sbjct: 162 EELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPEDVLLKELELVQNAFFT 221

Query: 260 NPKSYGAWYHRKWLLNQ 310
           +P    AW++ +WLL +
Sbjct: 222 DPNDQSAWFYHRWLLGR 238

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>PGTA_RAT (Q08602) Geranylgeranyl transferase type-2 alpha subunit (EC|
           2.5.1.60) (Geranylgeranyl transferase type II alpha
           subunit) (Rab geranylgeranyltransferase alpha subunit)
           (Rab geranyl-geranyltransferase alpha subunit) (Rab GG
           transferase alpha) (Ra
          Length = 567

 Score =  126 bits (316), Expect = 4e-29
 Identities = 69/148 (46%), Positives = 89/148 (60%)
 Frame = +2

Query: 86  EEALGLSFKLLEINPEAYTAWNYRKLALQHNLKELSDPEAIKSSVDAELRVVELALRQNP 265
           E  L L+ ++L  NP+  T WN R+  LQH L+    PE   + V AEL  +E  LR NP
Sbjct: 46  ESVLELTSQILGANPDFATLWNCRREVLQH-LETEKSPEESAALVKAELGFLESCLRVNP 104

Query: 266 KSYGAWYHRKWLLNQKLAPVDFKREYGLLDKLLKVDARNFHGWNYRRFLAKFMGVPEEKE 445
           KSYG W+HR WLL++   P ++ RE  L  + L+ D RNFH W+YRRF+A    V   +E
Sbjct: 105 KSYGTWHHRCWLLSRLPEP-NWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEE 163

Query: 446 LQYTMDKIGENFSNYSAWHNRSILLSNL 529
           L +T   I  NFSNYS+WH RS LL  L
Sbjct: 164 LAFTDSLITRNFSNYSSWHYRSCLLPQL 191



 Score = 35.8 bits (81), Expect = 0.078
 Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
 Frame = +2

Query: 89  EALGLSFKLLEINPEAYTAWNYRKLAL-QHNLKELSDPEAI--KSSVDAELRVVELALRQ 259
           E L  +  L+  N   Y++W+YR   L Q + +  S P+    ++ +  EL +V+ A   
Sbjct: 162 EELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFT 221

Query: 260 NPKSYGAWYHRKWLLNQ 310
           +P    AW++ +WLL +
Sbjct: 222 DPNDQSAWFYHRWLLGR 238

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>PGTA_MOUSE (Q9JHK4) Geranylgeranyl transferase type-2 alpha subunit (EC|
           2.5.1.60) (Geranylgeranyl transferase type II alpha
           subunit) (Rab geranylgeranyltransferase alpha subunit)
           (Rab geranyl-geranyltransferase alpha subunit) (Rab GG
           transferase alpha) (
          Length = 567

 Score =  125 bits (313), Expect = 1e-28
 Identities = 68/148 (45%), Positives = 89/148 (60%)
 Frame = +2

Query: 86  EEALGLSFKLLEINPEAYTAWNYRKLALQHNLKELSDPEAIKSSVDAELRVVELALRQNP 265
           E  L L+ ++L  NP+  T WN R+  LQ  L+    PE + + V AEL  +E  LR NP
Sbjct: 46  ESVLELTSQILGANPDFATLWNCRREVLQQ-LETQKSPEELAALVKAELGFLESCLRVNP 104

Query: 266 KSYGAWYHRKWLLNQKLAPVDFKREYGLLDKLLKVDARNFHGWNYRRFLAKFMGVPEEKE 445
           KSYG W+HR WLL++   P ++ RE  L  + L+ D RNFH W+YRRF+A    V   +E
Sbjct: 105 KSYGTWHHRCWLLSRLPEP-NWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEE 163

Query: 446 LQYTMDKIGENFSNYSAWHNRSILLSNL 529
           L +T   I  NFSNYS+WH RS LL  L
Sbjct: 164 LAFTDSLITRNFSNYSSWHYRSCLLPQL 191



 Score = 35.8 bits (81), Expect = 0.078
 Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
 Frame = +2

Query: 89  EALGLSFKLLEINPEAYTAWNYRKLAL-QHNLKELSDPEAI--KSSVDAELRVVELALRQ 259
           E L  +  L+  N   Y++W+YR   L Q + +  S P+    ++ +  EL +V+ A   
Sbjct: 162 EELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLRELELVQNAFFT 221

Query: 260 NPKSYGAWYHRKWLLNQ 310
           +P    AW++ +WLL +
Sbjct: 222 DPNDQSAWFYHRWLLGR 238

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>BET4_CANAL (O93829) Geranylgeranyl transferase type-2 alpha subunit (EC|
           2.5.1.60) (Geranylgeranyl transferase type II alpha
           subunit) (Type II protein geranyl-geranyltransferase
           alpha subunit) (GGTase-II-alpha) (PGGT) (YPT1/SEC4
           proteins geranylgeranyltra
          Length = 371

 Score =  124 bits (312), Expect = 1e-28
 Identities = 68/165 (41%), Positives = 101/165 (61%), Gaps = 15/165 (9%)
 Frame = +2

Query: 80  YTEEALGLSFKLLEINPEAYTAWNYRKLALQHNLKELSDPE--AIKSSVDAELRVVELAL 253
           Y++EAL  + +LL INPE YT WNYR+  L +N    +D +    +  ++ +L  V + L
Sbjct: 45  YSDEALIKTNELLIINPEFYTIWNYRREILINNYSSSNDKDDQIYEDILNQDLNFVLVQL 104

Query: 254 RQNPKSYGAWYHRKWLLNQ--KLAPVDFKREYGLLDKLLKVDARNFHGWNYRRFLAKFMG 427
           ++ PK Y  W HR+WLL +  KL  V++K E+G++ KLL +D RNFHGW+YRRF+ K M 
Sbjct: 105 KKFPKCYWIWNHRRWLLFELVKLGKVNWKYEFGVVSKLLDLDQRNFHGWHYRRFVVKNME 164

Query: 428 VPEEK-----------ELQYTMDKIGENFSNYSAWHNRSILLSNL 529
           +  +            E  YT  KI ++FSN+SAWHNR+ L+  +
Sbjct: 165 LECKNDTTLILKINLDEFNYTTLKIQKDFSNFSAWHNRTKLIPKI 209

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>BET4_YEAST (Q00618) Geranylgeranyl transferase type-2 alpha subunit (EC|
           2.5.1.60) (Geranylgeranyl transferase type II alpha
           subunit) (Type II protein geranyl-geranyltransferase
           alpha subunit) (GGTase-II-alpha) (PGGT) (YPT1/SEC4
           proteins geranylgeranyltra
          Length = 327

 Score =  105 bits (261), Expect = 1e-22
 Identities = 64/172 (37%), Positives = 91/172 (52%), Gaps = 7/172 (4%)
 Frame = +2

Query: 35  RXLQVQVLHNHHTCTYTEEALGLSFKLLEINPEAYTAWNYRKLALQHNLKELSDPEAIKS 214
           R L   VL+      Y+ EAL  + +LLE NPE    WNYR+  +     EL  P     
Sbjct: 29  RSLTENVLNMRDEKIYSIEALKKTSELLEKNPEFNAIWNYRRDIIASLASELEIP----- 83

Query: 215 SVDAELRVVELALRQNPKSYGAWYHRKWLLNQ--KLAPVDFKREYGLLDKLLKVDARNFH 388
             D EL  V + L+  PK Y  W HR W+L      +P  ++ E  +++KLL+ DARN+H
Sbjct: 84  FWDKELVFVMMLLKDYPKVYWIWNHRLWVLKHYPTSSPKVWQTELAVVNKLLEQDARNYH 143

Query: 389 GWNYRRFLAKFM-----GVPEEKELQYTMDKIGENFSNYSAWHNRSILLSNL 529
           GW+YRR +   +        +++E +YT  KI  N SNYSAWH R  ++S +
Sbjct: 144 GWHYRRIVVGNIESITNKSLDKEEFEYTTIKINNNISNYSAWHQRVQIISRM 195

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>PFTA_PEA (O24304) Protein farnesyltransferase/geranylgeranyltransferase type|
           I alpha subunit (EC 2.5.1.58) (EC 2.5.1.59) (CAAX
           farnesyltransferase alpha subunit) (Ras proteins
           prenyltransferase alpha) (FTase-alpha) (Type I protein
           geranyl-geranyltransfer
          Length = 333

 Score = 84.7 bits (208), Expect = 1e-16
 Identities = 45/147 (30%), Positives = 80/147 (54%)
 Frame = +2

Query: 83  TEEALGLSFKLLEINPEAYTAWNYRKLALQHNLKELSDPEAIKSSVDAELRVVELALRQN 262
           +  AL L+ + + +N   YT W++R+L L          E++K  +  E   VE     N
Sbjct: 62  SSRALALTAEAIGLNAGNYTVWHFRRLLL----------ESLKVDLHVEREFVERVASGN 111

Query: 263 PKSYGAWYHRKWLLNQKLAPVDFKREYGLLDKLLKVDARNFHGWNYRRFLAKFMGVPEEK 442
            K+Y  W+HR+W+  +KL P     E     K+L VDA+++H W++R+++ + +G  E+ 
Sbjct: 112 SKNYQIWHHRRWVA-EKLGPEARNSELEFTKKILSVDAKHYHAWSHRQWVLQNLGGWED- 169

Query: 443 ELQYTMDKIGENFSNYSAWHNRSILLS 523
           EL Y  + + E+  N SAW+ R  +++
Sbjct: 170 ELSYCSELLAEDIFNNSAWNQRYFVIT 196



 Score = 31.2 bits (69), Expect = 1.9
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 440 KELQYTMDKIGENFSNYSAWHNRSILLSNLLI 535
           + L  T + IG N  NY+ WH R +LL +L +
Sbjct: 64  RALALTAEAIGLNAGNYTVWHFRRLLLESLKV 95

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>PFTA_LYCES (P93227) Protein farnesyltransferase/geranylgeranyltransferase type|
           I alpha subunit (EC 2.5.1.58) (EC 2.5.1.59) (CAAX
           farnesyltransferase alpha subunit) (Ras proteins
           prenyltransferase alpha) (FTase-alpha) (Type I protein
           geranyl-geranyltransf
          Length = 346

 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 43/144 (29%), Positives = 78/144 (54%)
 Frame = +2

Query: 92  ALGLSFKLLEINPEAYTAWNYRKLALQHNLKELSDPEAIKSSVDAELRVVELALRQNPKS 271
           AL L+ + +++NP  YT W +R++ L          EA+   +  EL+ V+    +N K+
Sbjct: 63  ALQLTGEAIQLNPGNYTVWQFRRVVL----------EALGVDLREELKFVDRIAGENTKN 112

Query: 272 YGAWYHRKWLLNQKLAPVDFKREYGLLDKLLKVDARNFHGWNYRRFLAKFMGVPEEKELQ 451
           Y  W+HR+WL  +KL       E     K+   DA+N+H W++R+++ + +G  E+ EL 
Sbjct: 113 YQIWHHRRWLA-EKLGADAVTNELEFTKKIFSQDAKNYHAWSHRQWVLQALGGWED-ELA 170

Query: 452 YTMDKIGENFSNYSAWHNRSILLS 523
           Y    + ++  N SAW+ R  +++
Sbjct: 171 YCQQLLEDDIYNNSAWNQRYFVVT 194



 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 29/101 (28%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
 Frame = +2

Query: 230 LRVVELALRQNPKSYGAWYHRKWLLNQKLAPVDFKREYGLLDKLLKVDARNFHGWNYRRF 409
           L++   A++ NP +Y  W  R+ +L  +   VD + E   +D++   + +N+  W++RR+
Sbjct: 64  LQLTGEAIQLNPGNYTVWQFRRVVL--EALGVDLREELKFVDRIAGENTKNYQIWHHRRW 121

Query: 410 LAKFMGVPE-EKELQYTMDKIGENFSNYSAWHNRSILLSNL 529
           LA+ +G      EL++T     ++  NY AW +R  +L  L
Sbjct: 122 LAEKLGADAVTNELEFTKKIFSQDAKNYHAWSHRQWVLQAL 162



 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 20/65 (30%), Positives = 34/65 (52%)
 Frame = +2

Query: 335 REYGLLDKLLKVDARNFHGWNYRRFLAKFMGVPEEKELQYTMDKIGENFSNYSAWHNRSI 514
           R   L  + ++++  N+  W +RR + + +GV   +EL++     GEN  NY  WH+R  
Sbjct: 62  RALQLTGEAIQLNPGNYTVWQFRRVVLEALGVDLREELKFVDRIAGENTKNYQIWHHRRW 121

Query: 515 LLSNL 529
           L   L
Sbjct: 122 LAEKL 126

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>RAM2_YEAST (P29703) Protein farnesyltransferase/geranylgeranyltransferase type|
           I alpha subunit (EC 2.5.1.58) (EC 2.5.1.59) (CAAX
           farnesyltransferase alpha subunit) (Ras proteins
           prenyltransferase alpha) (FTase-alpha) (Type I protein
           geranyl-geranyltransf
          Length = 316

 Score = 79.7 bits (195), Expect = 5e-15
 Identities = 46/139 (33%), Positives = 75/139 (53%)
 Frame = +2

Query: 92  ALGLSFKLLEINPEAYTAWNYRKLALQHNLKELSDPEAIKSSVDAELRVVELALRQNPKS 271
           AL L+ +++++ P  YT WNYR   ++H + E  D       ++ EL  ++     NPK+
Sbjct: 51  ALQLTAEIIDVAPAFYTIWNYRFNIVRHMMSESEDTVLY---LNKELDWLDEVTLNNPKN 107

Query: 272 YGAWYHRKWLLNQKLAPVDFKREYGLLDKLLKVDARNFHGWNYRRFLAKFMGVPEEKELQ 451
           Y  W +R+ LL    +P  FKRE  +L  ++  D++N+H W+YR++   F     + EL 
Sbjct: 108 YQIWSYRQSLLKLHPSP-SFKRELPILKLMIDDDSKNYHVWSYRKWCCLFFS-DFQHELA 165

Query: 452 YTMDKIGENFSNYSAWHNR 508
           Y  D I  +  N SAW +R
Sbjct: 166 YASDLIETDIYNNSAWTHR 184

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>PFTA_ARATH (Q9LX33) Protein farnesyltransferase/geranylgeranyltransferase type|
           I alpha subunit (EC 2.5.1.58) (EC 2.5.1.59) (CAAX
           farnesyltransferase alpha subunit) (Ras proteins
           prenyltransferase alpha) (FTase-alpha) (Type I protein
           geranyl-geranyltransf
          Length = 340

 Score = 79.0 bits (193), Expect = 8e-15
 Identities = 44/144 (30%), Positives = 78/144 (54%)
 Frame = +2

Query: 92  ALGLSFKLLEINPEAYTAWNYRKLALQHNLKELSDPEAIKSSVDAELRVVELALRQNPKS 271
           AL L+ + L +N   YT W++R+L L          EA+   +  EL  +E     N K+
Sbjct: 73  ALRLTEETLLLNSGNYTVWHFRRLVL----------EALNHDLFEELEFIERIAEDNSKN 122

Query: 272 YGAWYHRKWLLNQKLAPVDFKREYGLLDKLLKVDARNFHGWNYRRFLAKFMGVPEEKELQ 451
           Y  W+HR+W+  +KL P    RE     ++L +DA+++H W++R++  + +G  E+ EL 
Sbjct: 123 YQLWHHRRWVA-EKLGPDVAGRELEFTRRVLSLDAKHYHAWSHRQWTLRALGGWED-ELD 180

Query: 452 YTMDKIGENFSNYSAWHNRSILLS 523
           Y  + +  +  N SAW+ R  +++
Sbjct: 181 YCHELLEADVFNNSAWNQRYYVIT 204



 Score = 33.9 bits (76), Expect = 0.29
 Identities = 15/58 (25%), Positives = 31/58 (53%)
 Frame = +2

Query: 335 REYGLLDKLLKVDARNFHGWNYRRFLAKFMGVPEEKELQYTMDKIGENFSNYSAWHNR 508
           R   L ++ L +++ N+  W++RR + + +     +EL++      +N  NY  WH+R
Sbjct: 72  RALRLTEETLLLNSGNYTVWHFRRLVLEALNHDLFEELEFIERIAEDNSKNYQLWHHR 129

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>PFTA_MOUSE (Q61239) Protein farnesyltransferase/geranylgeranyltransferase type|
           I alpha subunit (EC 2.5.1.58) (EC 2.5.1.59) (CAAX
           farnesyltransferase alpha subunit) (Ras proteins
           prenyltransferase alpha) (FTase-alpha) (Type I protein
           geranyl-geranyltransf
          Length = 377

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 40/148 (27%), Positives = 76/148 (51%)
 Frame = +2

Query: 83  TEEALGLSFKLLEINPEAYTAWNYRKLALQHNLKELSDPEAIKSSVDAELRVVELALRQN 262
           +E A  L+   +E+N   YT W++R++ L+   K+L +          E+  +   + + 
Sbjct: 113 SERAFKLTRDAIELNAANYTVWHFRRVLLRSLQKDLQE----------EMNYITAIIEEQ 162

Query: 263 PKSYGAWYHRKWLLNQKLAPVDFKREYGLLDKLLKVDARNFHGWNYRRFLAKFMGVPEEK 442
           PK+Y  W+HR+ L+     P    +E   +  +L  DA+N+H W +R+++ +   +  + 
Sbjct: 163 PKNYQVWHHRRVLVEWLKDP---SQELEFIADILSQDAKNYHAWQHRQWVIQEFRL-WDN 218

Query: 443 ELQYTMDKIGENFSNYSAWHNRSILLSN 526
           ELQY    + E+  N S W+ R  ++SN
Sbjct: 219 ELQYVDQLLKEDVRNNSVWNQRHFVISN 246



 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 45/144 (31%), Positives = 75/144 (52%), Gaps = 5/144 (3%)
 Frame = +2

Query: 86  EEALGLSFKLLEINPEAYTAWNYRKLALQHNLKELSDPEAIKSSVDAELRVVELALRQNP 265
           +E +     ++E  P+ Y  W++R++ ++     L DP         EL  +   L Q+ 
Sbjct: 149 QEEMNYITAIIEEQPKNYQVWHHRRVLVEW----LKDPSQ-------ELEFIADILSQDA 197

Query: 266 KSYGAWYHRKWLLNQKLAPVDFKREYGLLDKLLKVDARNFHGWNYRRF-LAKFMGVPE-- 436
           K+Y AW HR+W++ Q+    D + +Y  +D+LLK D RN   WN R F ++   G  +  
Sbjct: 198 KNYHAWQHRQWVI-QEFRLWDNELQY--VDQLLKEDVRNNSVWNQRHFVISNTTGYSDRA 254

Query: 437 --EKELQYTMDKIGENFSNYSAWH 502
             E+E+QYT++ I     N SAW+
Sbjct: 255 VLEREVQYTLEMIKLVPHNESAWN 278



 Score = 30.8 bits (68), Expect = 2.5
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +2

Query: 437 EKELQYTMDKIGENFSNYSAWHNRSILLSNL 529
           E+  + T D I  N +NY+ WH R +LL +L
Sbjct: 114 ERAFKLTRDAIELNAANYTVWHFRRVLLRSL 144

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>PFTA_BOVIN (P29702) Protein farnesyltransferase/geranylgeranyltransferase type|
           I alpha subunit (EC 2.5.1.58) (EC 2.5.1.59) (CAAX
           farnesyltransferase alpha subunit) (Ras proteins
           prenyltransferase alpha) (FTase-alpha) (Type I protein
           geranyl-geranyltransf
          Length = 340

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 40/148 (27%), Positives = 76/148 (51%)
 Frame = +2

Query: 83  TEEALGLSFKLLEINPEAYTAWNYRKLALQHNLKELSDPEAIKSSVDAELRVVELALRQN 262
           +E A  L+   +E+N   YT W++R++ L+   K+L +          E+  +   + + 
Sbjct: 74  SERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHE----------EMNYISAIIEEQ 123

Query: 263 PKSYGAWYHRKWLLNQKLAPVDFKREYGLLDKLLKVDARNFHGWNYRRFLAKFMGVPEEK 442
           PK+Y  W+HR+ L+     P    +E   +  +L  DA+N+H W +R+++ +   +  + 
Sbjct: 124 PKNYQVWHHRRVLVEWLRDP---SQELEFIADILTQDAKNYHAWQHRQWVIQEFKL-WDN 179

Query: 443 ELQYTMDKIGENFSNYSAWHNRSILLSN 526
           ELQY    + E+  N S W+ R  ++SN
Sbjct: 180 ELQYVDQLLKEDVRNNSVWNQRYFVISN 207



 Score = 31.2 bits (69), Expect = 1.9
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +2

Query: 437 EKELQYTMDKIGENFSNYSAWHNRSILLSNL 529
           E+  + T D I  N +NY+ WH R +LL +L
Sbjct: 75  ERAFKLTRDAIELNAANYTVWHFRRVLLKSL 105

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>PFTA_RAT (Q04631) Protein farnesyltransferase/geranylgeranyltransferase type|
           I alpha subunit (EC 2.5.1.58) (EC 2.5.1.59) (CAAX
           farnesyltransferase alpha subunit) (Ras proteins
           prenyltransferase alpha) (FTase-alpha) (Type I protein
           geranyl-geranyltransfer
          Length = 377

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 40/148 (27%), Positives = 76/148 (51%)
 Frame = +2

Query: 83  TEEALGLSFKLLEINPEAYTAWNYRKLALQHNLKELSDPEAIKSSVDAELRVVELALRQN 262
           +E A  L+   +E+N   YT W++R++ L+   K+L +          E+  +   + + 
Sbjct: 113 SERAFKLTRDAIELNAANYTVWHFRRVLLRSLQKDLQE----------EMNYIIAIIEEQ 162

Query: 263 PKSYGAWYHRKWLLNQKLAPVDFKREYGLLDKLLKVDARNFHGWNYRRFLAKFMGVPEEK 442
           PK+Y  W+HR+ L+     P    +E   +  +L  DA+N+H W +R+++ +   +  + 
Sbjct: 163 PKNYQVWHHRRVLVEWLKDP---SQELEFIADILNQDAKNYHAWQHRQWVIQEFRL-WDN 218

Query: 443 ELQYTMDKIGENFSNYSAWHNRSILLSN 526
           ELQY    + E+  N S W+ R  ++SN
Sbjct: 219 ELQYVDQLLKEDVRNNSVWNQRHFVISN 246



 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 45/144 (31%), Positives = 75/144 (52%), Gaps = 5/144 (3%)
 Frame = +2

Query: 86  EEALGLSFKLLEINPEAYTAWNYRKLALQHNLKELSDPEAIKSSVDAELRVVELALRQNP 265
           +E +     ++E  P+ Y  W++R++ ++     L DP         EL  +   L Q+ 
Sbjct: 149 QEEMNYIIAIIEEQPKNYQVWHHRRVLVEW----LKDPSQ-------ELEFIADILNQDA 197

Query: 266 KSYGAWYHRKWLLNQKLAPVDFKREYGLLDKLLKVDARNFHGWNYRRF-LAKFMGVPE-- 436
           K+Y AW HR+W++ Q+    D + +Y  +D+LLK D RN   WN R F ++   G  +  
Sbjct: 198 KNYHAWQHRQWVI-QEFRLWDNELQY--VDQLLKEDVRNNSVWNQRHFVISNTTGYSDRA 254

Query: 437 --EKELQYTMDKIGENFSNYSAWH 502
             E+E+QYT++ I     N SAW+
Sbjct: 255 VLEREVQYTLEMIKLVPHNESAWN 278



 Score = 30.8 bits (68), Expect = 2.5
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +2

Query: 437 EKELQYTMDKIGENFSNYSAWHNRSILLSNL 529
           E+  + T D I  N +NY+ WH R +LL +L
Sbjct: 114 ERAFKLTRDAIELNAANYTVWHFRRVLLRSL 144

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>PFTA_HUMAN (P49354) Protein farnesyltransferase/geranylgeranyltransferase type|
           I alpha subunit (EC 2.5.1.58) (EC 2.5.1.59) (CAAX
           farnesyltransferase alpha subunit) (Ras proteins
           prenyltransferase alpha) (FTase-alpha) (Type I protein
           geranyl-geranyltransf
          Length = 379

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 40/148 (27%), Positives = 76/148 (51%)
 Frame = +2

Query: 83  TEEALGLSFKLLEINPEAYTAWNYRKLALQHNLKELSDPEAIKSSVDAELRVVELALRQN 262
           +E A  L+   +E+N   YT W++R++ L+   K+L +          E+  +   + + 
Sbjct: 113 SERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHE----------EMNYITAIIEEQ 162

Query: 263 PKSYGAWYHRKWLLNQKLAPVDFKREYGLLDKLLKVDARNFHGWNYRRFLAKFMGVPEEK 442
           PK+Y  W+HR+ L+     P    +E   +  +L  DA+N+H W +R+++ +   +  + 
Sbjct: 163 PKNYQVWHHRRVLVEWLRDP---SQELEFIADILNQDAKNYHAWQHRQWVIQEFKL-WDN 218

Query: 443 ELQYTMDKIGENFSNYSAWHNRSILLSN 526
           ELQY    + E+  N S W+ R  ++SN
Sbjct: 219 ELQYVDQLLKEDVRNNSVWNQRYFVISN 246



 Score = 31.2 bits (69), Expect = 1.9
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +2

Query: 437 EKELQYTMDKIGENFSNYSAWHNRSILLSNL 529
           E+  + T D I  N +NY+ WH R +LL +L
Sbjct: 114 ERAFKLTRDAIELNAANYTVWHFRRVLLKSL 144

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>PFTA_SCHPO (O60052) Protein farnesyltransferase/geranylgeranyltransferase type|
           I alpha subunit (EC 2.5.1.58) (EC 2.5.1.59) (CAAX
           farnesyltransferase alpha subunit) (Ras proteins
           prenyltransferase alpha) (FTase-alpha) (Type I protein
           geranyl-geranyltransf
          Length = 294

 Score = 69.3 bits (168), Expect = 6e-12
 Identities = 42/147 (28%), Positives = 75/147 (51%)
 Frame = +2

Query: 80  YTEEALGLSFKLLEINPEAYTAWNYRKLALQHNLKELSDPEAIKSSVDAELRVVELALRQ 259
           Y+  AL L+  L+  NP  YT W YR   L H            S +D EL  ++     
Sbjct: 57  YSLRALNLTGFLIMNNPAHYTVWAYRFQILNHT----------PSYIDNELEWLDEIAED 106

Query: 260 NPKSYGAWYHRKWLLNQKLAPVDFKREYGLLDKLLKVDARNFHGWNYRRFLAKFMGVPEE 439
             K+Y  W+HR+ +L+      +++RE     K+ ++D++N+H W+YR ++ +       
Sbjct: 107 FQKNYQVWHHRQKILS---LTKNYERELEFTKKMFEIDSKNYHVWSYRVWILQNFN-DYS 162

Query: 440 KELQYTMDKIGENFSNYSAWHNRSILL 520
           +EL+ T + + ++  N SAW++R  +L
Sbjct: 163 QELKLTNELLEKDIYNNSAWNHRFYVL 189



 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
 Frame = +2

Query: 203 AIKSSVDAELRVVELA---LRQNPKSYGAWYHRKWLLNQKLAPVDFKREYGLLDKLLKVD 373
           AI +  +  LR + L    +  NP  Y  W +R  +LN   + +D + E+  LD++ +  
Sbjct: 50  AIMAKKEYSLRALNLTGFLIMNNPAHYTVWAYRFQILNHTPSYIDNELEW--LDEIAEDF 107

Query: 374 ARNFHGWNYRRFLAKFMGVPE--EKELQYTMDKIGENFSNYSAWHNRSILLSN 526
            +N+  W++R+   K + + +  E+EL++T      +  NY  W  R  +L N
Sbjct: 108 QKNYQVWHHRQ---KILSLTKNYERELEFTKKMFEIDSKNYHVWSYRVWILQN 157

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>RAM2_CANAL (Q9Y765) Protein farnesyltransferase/geranylgeranyltransferase type|
           I alpha subunit (EC 2.5.1.58) (EC 2.5.1.59) (CAAX
           farnesyltransferase alpha subunit) (Ras proteins
           prenyltransferase alpha) (FTase-alpha) (Type I protein
           geranyl-geranyltransf
          Length = 306

 Score = 58.9 bits (141), Expect = 9e-09
 Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 5/131 (3%)
 Frame = +2

Query: 125 NPEAYTAWNYRKLALQHNLKELSDPEAIKSSVDAELRVVELALRQNPKSYGAWYHRKWLL 304
           N + Y  WNYR+L +   + EL++ +        E  ++E  L  +PK++  W +RKWL+
Sbjct: 99  NEKNYQIWNYRQLIIGQ-IMELNNNDF---DPYREFPILEAMLSSDPKNHHVWSYRKWLV 154

Query: 305 NQKLAPVDFKREYGLLDKLLKVDARNFHGWNYRRFLA---KFMGVPE--EKELQYTMDKI 469
           +      D K E   +DK++  D +N   W++R FL    K +      ++EL Y  DKI
Sbjct: 155 DTFDLHNDAK-ELSFVDKVIDTDLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKI 213

Query: 470 GENFSNYSAWH 502
            +   N S W+
Sbjct: 214 VKCPQNPSTWN 224



 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 5/152 (3%)
 Frame = +2

Query: 80  YTEEALGLSFKLLEINPEAYTAWNYRKLALQHNLKELSDPEAIKSSVDAELRVVELALRQ 259
           Y+E AL ++   +      YT W YR     + LK L +      ++  EL   E     
Sbjct: 48  YSERALHITELGINELASHYTIWIYRF----NILKNLPN-----RNLYDELDWCEEIALD 98

Query: 260 NPKSYGAWYHRKWLLNQ--KLAPVDFK--REYGLLDKLLKVDARNFHGWNYRRFLAKFMG 427
           N K+Y  W +R+ ++ Q  +L   DF   RE+ +L+ +L  D +N H W+YR++L     
Sbjct: 99  NEKNYQIWNYRQLIIGQIMELNNNDFDPYREFPILEAMLSSDPKNHHVWSYRKWLVDTFD 158

Query: 428 VPEE-KELQYTMDKIGENFSNYSAWHNRSILL 520
           +  + KEL +    I  +  N SAW +R  LL
Sbjct: 159 LHNDAKELSFVDKVIDTDLKNNSAWSHRFFLL 190

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>UBP11_YEAST (P36026) Ubiquitin carboxyl-terminal hydrolase 11 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 11)
           (Ubiquitin-specific-processing protease 11)
           (Deubiquitinating enzyme 11)
          Length = 717

 Score = 33.5 bits (75), Expect = 0.38
 Identities = 24/92 (26%), Positives = 41/92 (44%)
 Frame = +2

Query: 182 KELSDPEAIKSSVDAELRVVELALRQNPKSYGAWYHRKWLLNQKLAPVDFKREYGLLDKL 361
           +ELS+   +K   D  +     AL+ NP  Y  WY R  ++   L+P+D     G L+ +
Sbjct: 403 EELSNENVVKYYPDL-VSYDANALQVNPSKYEKWYERN-VITDGLSPIDHIYR-GQLENI 459

Query: 362 LKVDARNFHGWNYRRFLAKFMGVPEEKELQYT 457
           LK        ++Y  F    + +P+     +T
Sbjct: 460 LKCQRCGNSSYSYSTFYVLSLAIPKLSLYSFT 491

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>SYV_EHRCJ (Q3YT16) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 802

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
 Frame = +2

Query: 272 YGAWYHRKWLLNQKL-APVDFKREYGLLDKLLKVDARNFHGWNYRRFLAKFMGVPEEKEL 448
           YGA   R W  N KL A   F  E   L K           WN  +F++ F+    E +L
Sbjct: 542 YGADVVRYWTANSKLGADTTFSNEILKLGKRFTTKL-----WNASKFVSMFIDQYSEPDL 596

Query: 449 QY---TMDK 466
           QY   TMDK
Sbjct: 597 QYITETMDK 605

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>SKIL_PONPY (Q5R431) Ski-like protein (Ski-related protein)|
          Length = 684

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 13/32 (40%), Positives = 22/32 (68%)
 Frame = +2

Query: 416 KFMGVPEEKELQYTMDKIGENFSNYSAWHNRS 511
           K++G PEEK+L+  ++++ E FS  S   N+S
Sbjct: 334 KYLGTPEEKKLKIILEEMKEKFSMRSGKRNQS 365

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>SKIL_HUMAN (P12757) Ski-like protein (Ski-related protein) (Ski-related|
           oncogene)
          Length = 684

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 13/32 (40%), Positives = 22/32 (68%)
 Frame = +2

Query: 416 KFMGVPEEKELQYTMDKIGENFSNYSAWHNRS 511
           K++G PEEK+L+  ++++ E FS  S   N+S
Sbjct: 334 KYLGTPEEKKLKIILEEMKEKFSMRSGKRNQS 365

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>DSBD_YERPE (Q8ZIY9) Thiol:disulfide interchange protein dsbD precursor (EC|
           1.8.1.8) (Protein-disulfide reductase) (Disulfide
           reductase)
          Length = 595

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
 Frame = -3

Query: 331 EIHRGKLLVQQPLAMIPR--SIGLWVLPQGKLHHSE 230
           +IH G  L +Q + ++P+  ++G + LP+G  HH E
Sbjct: 65  QIHPGYYLYRQQIKIVPQQAALGAFTLPEGITHHDE 100

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>SYM_PROAC (Q6A707) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA|
           ligase) (MetRS)
          Length = 601

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 5/88 (5%)
 Frame = +2

Query: 140 TAWNYRKLALQHNLKELSDPEAIKSSVDAELRVVELALRQNP-KSYGAWYHRKWLLNQKL 316
           T W    L   HNL E   P AI   +D  +RV     + NP KS   W+    ++    
Sbjct: 217 TDWRPNVLKFSHNLLEELRPRAITRDLDWGIRVPVEGWQDNPMKSIYVWFDA--VIGYLS 274

Query: 317 APVDFKREYGLLDKLLKV----DARNFH 388
           A +++ R  G  D   +     DAR+++
Sbjct: 275 ASIEWARRIGRPDAWREFWNDEDARSYY 302

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>RNC_OCEIH (Q8ER05) Ribonuclease III (EC 3.1.26.3) (RNase III)|
          Length = 228

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 22/58 (37%), Positives = 33/58 (56%)
 Frame = +2

Query: 86  EEALGLSFKLLEINPEAYTAWNYRKLALQHNLKELSDPEAIKSSVDAELRVVELALRQ 259
           EE LG+SF+   +  EA+T  +Y     +H  + LSD E ++   DA   V+ELA+ Q
Sbjct: 7   EEHLGISFQQKALLKEAFTHSSY---VNEHRKQRLSDNERLEFLGDA---VLELAVSQ 58

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>NUDT8_ARATH (Q8L7W2) Nudix hydrolase 8 (EC 3.6.1.-) (AtNUDT8)|
          Length = 369

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 20/72 (27%), Positives = 36/72 (50%)
 Frame = -3

Query: 445 LFLFWHPHKFCKEPAVIPSVEIPRIHL*QFIQEAVFALEIHRGKLLVQQPLAMIPRSIGL 266
           +  +W P +   EP+++P+    ++ +  F+      L  H+  L+VQ+     P   GL
Sbjct: 170 MLTYWIPEE---EPSMLPANASHQVGVGGFV------LNQHKEVLVVQEKYCA-PSITGL 219

Query: 265 WVLPQGKLHHSE 230
           W LP G ++ SE
Sbjct: 220 WKLPTGFINESE 231

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>YKR6_YEAST (P34239) Hypothetical 93.4 kDa protein in STE3-GIN10 intergenic|
           region
          Length = 828

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 13/49 (26%), Positives = 27/49 (55%)
 Frame = +2

Query: 176 NLKELSDPEAIKSSVDAELRVVELALRQNPKSYGAWYHRKWLLNQKLAP 322
           +L E+  P + KS   + L  +  ++   P SYG+W++++  ++Q   P
Sbjct: 475 SLAEVIQPSSFKSG-SSSLHYLSSSISSQPGSYGSWFNKRPTISQFFQP 522

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>SPC98_DICDI (Q95ZG4) Spindle pole body component 98 (Spc98) (DdSpc98)|
           (Fragment)
          Length = 812

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = +2

Query: 353 DKLLKVDARNFHGWNYRRFLAKFMGVPEEKELQYTMDKIGEN 478
           ++LLK+    F   N+ + L K++ + +   +QY MD IGE+
Sbjct: 484 ERLLKIVLNRFKFMNHVKALKKYLLLGQGDFIQYLMDLIGED 525

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>BLAB_STRCI (P33652) Beta-lactamase regulatory protein blaB|
          Length = 312

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 6/46 (13%)
 Frame = +2

Query: 113 LLEINPEAYTA-----WNYRKLALQHNLKELSDPEAIK-SSVDAEL 232
           L EI P A        W +R L ++H+++ELS+  A +  S DA L
Sbjct: 117 LFEITPPAQVEQMVREWGFRDLTVRHSMRELSETPAERFESADAHL 162

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>ANR50_HUMAN (Q9ULJ7) Ankyrin repeat domain-containing protein 50|
          Length = 1375

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = +2

Query: 212 SSVDAELRVVELALRQNPKSYGAWYHRKWLLNQKLAPVDFKREYGLLDKLL 364
           + V   L V+  A R  P +    YH  W  N  L   DF+R+  +L KLL
Sbjct: 294 AKVQPILNVILAACR--PLTITELYHAVWTKNMSLTLEDFQRKLDILSKLL 342

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>VE1_HPV15 (Q05135) Replication protein E1 (EC 3.6.1.-) (ATP-dependent|
           helicase E1)
          Length = 602

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 28/101 (27%), Positives = 40/101 (39%), Gaps = 13/101 (12%)
 Frame = +2

Query: 41  LQVQVLHNHHTCTYTEEALGLSFKLL---EINPEAYTAWNYRKLA---------LQHNLK 184
           +  Q + NH T   T+  L    +     E++ EA  AW+Y KLA         LQHN  
Sbjct: 292 IMTQTMINHQTAEATQFDLSTMVQYAYDNELSEEAEIAWHYAKLADTDANARAFLQHN-- 349

Query: 185 ELSDPEAIKSSVDAELRVVELAL-RQNPKSYGAWYHRKWLL 304
             S    +K   D  + V           S  +W H+K L+
Sbjct: 350 --SQARLVK---DCAIMVRHYRRGEMKEMSMSSWIHKKLLV 385


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,743,912
Number of Sequences: 219361
Number of extensions: 1416122
Number of successful extensions: 4146
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 3946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4064
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4200495993
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result