ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags9h01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY596559.1| Saccharum officinarum clone SCVPLB1018C01, comple... 252 1e-63
2gb|AY106118.1| Zea mays PCO078446 mRNA sequence 220 4e-54
3ref|XM_473807.1| Oryza sativa (japonica cultivar-group), predic... 214 2e-52
4dbj|AK068251.1| Oryza sativa (japonica cultivar-group) cDNA clon... 214 2e-52
5ref|XM_480815.1| Oryza sativa (japonica cultivar-group), mRNA 184 2e-43
6ref|XM_507171.1| PREDICTED Oryza sativa (japonica cultivar-group... 184 2e-43
7dbj|AK069639.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 2e-43
8dbj|AK060252.1| Oryza sativa (japonica cultivar-group) cDNA clon... 174 2e-40
9emb|AL662968.3|OSJN00168 Oryza sativa genomic DNA, chromosome 4,... 133 7e-28
10dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 133 7e-28
11gb|BT017922.1| Zea mays clone EL01N0519C02.c mRNA sequence 117 4e-23
12dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 117 4e-23
13dbj|AP004559.2| Oryza sativa (japonica cultivar-group) genomic D... 117 4e-23
14dbj|AP005410.3| Oryza sativa (japonica cultivar-group) genomic D... 117 4e-23
15emb|BX826707.1|CNS0A432 Arabidopsis thaliana Full-length cDNA Co... 48 0.031
16gb|AC133504.2| Mus musculus BAC clone RP24-174N6 from chromosome... 46 0.12
17gb|AC124675.9| Mus musculus chromosome 15, clone RP24-88M7, comp... 46 0.12
18emb|CT030638.12| Mouse DNA sequence from clone RP23-340M21 on ch... 46 0.12
19gb|AC005171.3| Arabidopsis thaliana chromosome 2 clone T4E14 map... 44 0.49
20ref|XM_629229.1| Dictyostelium discoideum hypothetical protein (... 42 1.9
21ref|XM_480944.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.9
22gb|BC063483.1| Homo sapiens cDNA clone IMAGE:5242363, partial cds 42 1.9
23emb|AL158167.15| Human DNA sequence from clone RP11-534G20 on ch... 42 1.9
24gb|AC048383.25| Homo sapiens chromosome 15, clone RP11-543G18, c... 42 1.9
25gb|AC158562.8| Mus musculus chromosome 8, clone RP24-275J2, comp... 42 1.9
26gb|AC090495.5| Genomic sequence for Mus musculus, clone RP23-60B... 42 1.9
27gb|AC005743.5| Mus musculus strain 129S6/SvEvTac chromosome 8c1 ... 42 1.9
28gb|AC078795.19| Homo sapiens 3 BAC RP11-362K14 (Roswell Park Can... 42 1.9
29dbj|AP004690.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
30dbj|AK103017.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.9
31dbj|AK072666.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.9
32gb|AC171338.5| Rhesus Macaque BAC CH250-526I15 (Children's Hosp... 42 1.9
33gb|AC124810.14| Mus musculus chromosome 15, clone RP23-163N4, co... 40 7.6
34ref|NM_106536.3| Arabidopsis thaliana unknown protein AT1G78880 ... 40 7.6
35ref|NM_118355.1| Arabidopsis thaliana cysteine-type endopeptidas... 40 7.6
36gb|AC167138.6| Mus musculus chromosome 15, clone RP24-358O3, com... 40 7.6
37gb|AC005203.1| Homo sapiens chromosome 16, cosmid clone RT70 (LA... 40 7.6
38gb|AC166939.2| Mus musculus BAC clone RP23-72K19 from chromosome... 40 7.6
39gb|AC109162.12| Mus musculus chromosome 7, clone RP24-177G14, co... 40 7.6
40gb|AC122890.4| Mus musculus BAC clone RP23-63O14 from 8, complet... 40 7.6
41gb|AF540004.1| Caenorhabditis briggsae mesocentin (dig-1) gene, ... 40 7.6
42emb|AL160159.12| Human DNA sequence from clone RP11-71K7 on chro... 40 7.6
43gb|BT000364.1| Arabidopsis thaliana unknown protein (At1g78880) ... 40 7.6
44gb|AY096686.1| Arabidopsis thaliana unknown protein (At1g78880) ... 40 7.6
45gb|AY072176.1| Arabidopsis thaliana unknown protein (At1g78880) ... 40 7.6
46emb|CR356241.8| Zebrafish DNA sequence from clone DKEY-90M21 in ... 40 7.6
47gb|AY140104.1| Arabidopsis thaliana unknown protein mRNA, comple... 40 7.6
48gb|AY120734.1| Arabidopsis thaliana unknown protein (At1g78880) ... 40 7.6
49dbj|AK126850.1| Homo sapiens cDNA FLJ44902 fis, clone BRAMY3004364 40 7.6
50dbj|AK095412.1| Homo sapiens cDNA FLJ38093 fis, clone CTONG2027361 40 7.6
51gb|BT006592.1| Arabidopsis thaliana At4g22290 mRNA, complete cds 40 7.6
52gb|AC006111.4| Homo sapiens chromosome 16 clone RP11-461A8, comp... 40 7.6
53emb|BX827002.1|CNS0A4AI Arabidopsis thaliana Full-length cDNA Co... 40 7.6
54emb|BX827259.1|CNS0A2E0 Arabidopsis thaliana Full-length cDNA Co... 40 7.6
55emb|BX648480.1|HSM808628 Homo sapiens mRNA; cDNA DKFZp686H0155 (... 40 7.6
56emb|BX648257.1|HSM808405 Homo sapiens mRNA; cDNA DKFZp686E23115 ... 40 7.6
57gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 7.6
58gb|AC148976.3| Mus musculus BAC clone RP23-391I5 from 7, complet... 40 7.6 
>gb|AY596559.1| Saccharum officinarum clone SCVPLB1018C01, complete sequence
          Length = 2065

 Score =  252 bits (127), Expect = 1e-63
 Identities = 319/383 (83%)
 Strand = Plus / Plus

                                                                        
Query: 177  tgctgttcacaatgcgattgtgctgatagttgttgttgcaatgattggttctgctgctgc 236
            ||||||||||||||| ||| |||||||||||||||| |  ||  |||||| || ||||||
Sbjct: 1061 tgctgttcacaatgcaattttgctgatagttgttgtggtgatatttggttttgttgctgc 1120

                                                                        
Query: 237  acttgtgtcttggaatgtttggcggggcaggagaggcgtgctcaggtttgtcaatagctg 296
            |||| |    ||||||| |||  |||| ||||||||||   |  ||||||| ||| ||| 
Sbjct: 1121 acttcttatctggaatgcttgctggggtaggagaggcgcaattgggtttgttaatcgcta 1180

                                                                        
Query: 297  tcctgatactgatctcagaactgcaaaagatggagagtatgtgaaggttacaggggttgt 356
            ||||||| |||||||||||||||| ||||||||| ||||||| |||||||||||||| ||
Sbjct: 1181 tcctgatgctgatctcagaactgccaaagatggacagtatgtaaaggttacaggggtggt 1240

                                                                        
Query: 357  tacgtgtggaaatttccccctggagtcctcatttcaaaggattccgagatgtgtgtacac 416
            ||| ||||||||||||||||| || ||||| || |||||| | || ||||| || |||||
Sbjct: 1241 tacttgtggaaatttccccctcgaatcctcgttccaaagggtcccaagatgcgtatacac 1300

                                                                        
Query: 417  ttcaactaggctgtatgagtataggggctgggattcaaaaactgcaaaccccaagcatcg 476
            ||| |||||  |||||||||| ||||| |||||||| ||| |||| ||  |  |||||||
Sbjct: 1301 ttctactagcttgtatgagtacaggggttgggattccaaagctgccaatacggagcatcg 1360

                                                                        
Query: 477  ccggtttacctggggattacgcacagcagagcggcatgcggtcgatttctacatttcaga 536
             || ||||||||||| |||||| ||   ||||| |||||||| ||||||||||| |||||
Sbjct: 1361 gcgttttacctggggtttacgctcaatggagcgacatgcggttgatttctacatctcaga 1420

                                   
Query: 537  ctttcagtctgggcttcgagcat 559
             ||||||||||||||||||||||
Sbjct: 1421 ttttcagtctgggcttcgagcat 1443



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                       
Query: 8   ctgctgcatcgatgaaggtgcgggccacatcgcttgctcacaaccaggctgttactacac 67
           ||||||||||||||||  ||||||| || ||  |||||||||| || ||||||||||  |
Sbjct: 892 ctgctgcatcgatgaaaatgcgggctacttcctttgctcacaatcaagctgttactaatc 951

                                  
Query: 68  tcaccagtgaaggtggtttctca 90
           ||| || ||||| ||||| ||||
Sbjct: 952 tcaacactgaagatggttactca 974
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>gb|AY106118.1| Zea mays PCO078446 mRNA sequence
          Length = 988

 Score =  220 bits (111), Expect = 4e-54
 Identities = 237/279 (84%)
 Strand = Plus / Plus

                                                                       
Query: 281 ggtttgtcaatagctgtcctgatactgatctcagaactgcaaaagatggagagtatgtga 340
           ||||||| ||| ||| ||||||| |||||||||||||||| ||||||||| | ||||| |
Sbjct: 88  ggtttgttaatcgctatcctgatgctgatctcagaactgctaaagatggacaatatgtaa 147

                                                                       
Query: 341 aggttacaggggttgttacgtgtggaaatttccccctggagtcctcatttcaaaggattc 400
           ||||||||||||||||||| ||||||||||||||||| || ||||| || |||||| | |
Sbjct: 148 aggttacaggggttgttacctgtggaaatttcccccttgaatcctcgttccaaagggtcc 207

                                                                       
Query: 401 cgagatgtgtgtacacttcaactaggctgtatgagtataggggctgggattcaaaaactg 460
           |||||||||| |||||||| |||||  |||||||||| || || |||||||| ||| |||
Sbjct: 208 cgagatgtgtatacacttctactagcttgtatgagtacagaggttgggattccaaagctg 267

                                                                       
Query: 461 caaaccccaagcatcgccggtttacctggggattacgcacagcagagcggcatgcggtcg 520
           | ||  |  ||||||| || ||||||||||| |||||| ||   ||||| |||||||| |
Sbjct: 268 ccaatacagagcatcggcgttttacctggggcttacgctcaatggagcgccatgcggttg 327

                                                  
Query: 521 atttctacatttcagactttcagtctgggcttcgagcat 559
           ||||||| || ||||| |||||||| |||||||||||||
Sbjct: 328 atttctatatctcagattttcagtccgggcttcgagcat 366
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>ref|XM_473807.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1449

 Score =  214 bits (108), Expect = 2e-52
 Identities = 318/388 (81%)
 Strand = Plus / Plus

                                                                        
Query: 164  tcttcattcttattgctgttcacaatgcgattgtgctgatagttgttgttgcaatgattg 223
            |||| ||||||| ||||||||||||||| ||| | |||||||||||| | |   || |||
Sbjct: 701  tcttgattcttagtgctgttcacaatgcaattcttctgatagttgttctggtgctgtttg 760

                                                                        
Query: 224  gttctgctgctgcacttgtgtcttggaatgtttggcggggcaggagaggcgtgctcaggt 283
            ||| || |||||||||| |   |||||||| |||  |||  |||||||| ||| |  |||
Sbjct: 761  gttttgttgctgcacttttcatttggaatgcttgctgggcaaggagaggtgtgattgggt 820

                                                                        
Query: 284  ttgtcaatagctgtcctgatactgatctcagaactgcaaaagatggagagtatgtgaagg 343
            ||||  || ||| | ||||| ||||||| |||||||| ||||||||| ||||| | ||||
Sbjct: 821  ttgtggatcgctattctgatgctgatctaagaactgctaaagatggacagtatatcaagg 880

                                                                        
Query: 344  ttacaggggttgttacgtgtggaaatttccccctggagtcctcatttcaaaggattccga 403
            |||||||||||||||| |||||||||||||| || |||||||| | ||||||| |||| |
Sbjct: 881  ttacaggggttgttacttgtggaaatttccctctcgagtcctcgtatcaaagggttccaa 940

                                                                        
Query: 404  gatgtgtgtacacttcaactaggctgtatgagtataggggctgggattcaaaaactgcaa 463
            |||||||||||||||||||||   |  |||| |||||||| ||||| |||||| |||| |
Sbjct: 941  gatgtgtgtacacttcaactaccttacatgaatataggggttgggactcaaaagctgcca 1000

                                                                        
Query: 464  accccaagcatcgccggtttacctggggattacgcacagcagagcggcatgcggtcgatt 523
            || || |||||| |||||||||||||||||||||  ||   ||||  || || || ||||
Sbjct: 1001 acacccagcatcaccggtttacctggggattacggtcaatggagcaacacgcagtggatt 1060

                                        
Query: 524  tctacatttcagactttcagtctgggct 551
            ||||||| ||||| ||||| ||||||||
Sbjct: 1061 tctacatctcagattttcaatctgggct 1088



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                       
Query: 8   ctgctgcatcgatgaaggtgcgggccacatcgcttgctcacaaccaggctgttactacac 67
           |||||||||| | ||||  ||||||||||||  || |||| |||||||||||||||| | 
Sbjct: 545 ctgctgcatccaagaagacgcgggccacatccttttctcataaccaggctgttactaaaa 604

                 
Query: 68  tcacca 73
           ||||||
Sbjct: 605 tcacca 610
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>dbj|AK068251.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013145H18, full
            insert sequence
          Length = 2228

 Score =  214 bits (108), Expect = 2e-52
 Identities = 318/388 (81%)
 Strand = Plus / Plus

                                                                        
Query: 164  tcttcattcttattgctgttcacaatgcgattgtgctgatagttgttgttgcaatgattg 223
            |||| ||||||| ||||||||||||||| ||| | |||||||||||| | |   || |||
Sbjct: 1134 tcttgattcttagtgctgttcacaatgcaattcttctgatagttgttctggtgctgtttg 1193

                                                                        
Query: 224  gttctgctgctgcacttgtgtcttggaatgtttggcggggcaggagaggcgtgctcaggt 283
            ||| || |||||||||| |   |||||||| |||  |||  |||||||| ||| |  |||
Sbjct: 1194 gttttgttgctgcacttttcatttggaatgcttgctgggcaaggagaggtgtgattgggt 1253

                                                                        
Query: 284  ttgtcaatagctgtcctgatactgatctcagaactgcaaaagatggagagtatgtgaagg 343
            ||||  || ||| | ||||| ||||||| |||||||| ||||||||| ||||| | ||||
Sbjct: 1254 ttgtggatcgctattctgatgctgatctaagaactgctaaagatggacagtatatcaagg 1313

                                                                        
Query: 344  ttacaggggttgttacgtgtggaaatttccccctggagtcctcatttcaaaggattccga 403
            |||||||||||||||| |||||||||||||| || |||||||| | ||||||| |||| |
Sbjct: 1314 ttacaggggttgttacttgtggaaatttccctctcgagtcctcgtatcaaagggttccaa 1373

                                                                        
Query: 404  gatgtgtgtacacttcaactaggctgtatgagtataggggctgggattcaaaaactgcaa 463
            |||||||||||||||||||||   |  |||| |||||||| ||||| |||||| |||| |
Sbjct: 1374 gatgtgtgtacacttcaactaccttacatgaatataggggttgggactcaaaagctgcca 1433

                                                                        
Query: 464  accccaagcatcgccggtttacctggggattacgcacagcagagcggcatgcggtcgatt 523
            || || |||||| |||||||||||||||||||||  ||   ||||  || || || ||||
Sbjct: 1434 acacccagcatcaccggtttacctggggattacggtcaatggagcaacacgcagtggatt 1493

                                        
Query: 524  tctacatttcagactttcagtctgggct 551
            ||||||| ||||| ||||| ||||||||
Sbjct: 1494 tctacatctcagattttcaatctgggct 1521



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                        
Query: 8    ctgctgcatcgatgaaggtgcgggccacatcgcttgctcacaaccaggctgttactacac 67
            |||||||||| | ||||  ||||||||||||  || |||| |||||||||||||||| | 
Sbjct: 978  ctgctgcatccaagaagacgcgggccacatccttttctcataaccaggctgttactaaaa 1037

                  
Query: 68   tcacca 73
            ||||||
Sbjct: 1038 tcacca 1043
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>ref|XM_480815.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1786

 Score =  184 bits (93), Expect = 2e-43
 Identities = 147/165 (89%)
 Strand = Plus / Plus

                                                                        
Query: 297  tcctgatactgatctcagaactgcaaaagatggagagtatgtgaaggttacaggggttgt 356
            ||||||| ||||||||||||| |||||||||||| |||||||||| ||||| ||||||||
Sbjct: 873  tcctgatgctgatctcagaacagcaaaagatggacagtatgtgaaagttactggggttgt 932

                                                                        
Query: 357  tacgtgtggaaatttccccctggagtcctcatttcaaaggattccgagatgtgtgtacac 416
            ||| ||||||||||| || || |||||||||||||||||| | || ||||||||||||||
Sbjct: 933  tacatgtggaaattttcctctcgagtcctcatttcaaagggtcccaagatgtgtgtacac 992

                                                         
Query: 417  ttcaactaggctgtatgagtataggggctgggattcaaaaactgc 461
            ||||||| |  |||||||||| |||||||||||||| ||| ||||
Sbjct: 993  ttcaacttgcttgtatgagtacaggggctgggattcgaaagctgc 1037
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>ref|XM_507171.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0038P10.32
            mRNA
          Length = 2080

 Score =  184 bits (93), Expect = 2e-43
 Identities = 147/165 (89%)
 Strand = Plus / Plus

                                                                        
Query: 297  tcctgatactgatctcagaactgcaaaagatggagagtatgtgaaggttacaggggttgt 356
            ||||||| ||||||||||||| |||||||||||| |||||||||| ||||| ||||||||
Sbjct: 1170 tcctgatgctgatctcagaacagcaaaagatggacagtatgtgaaagttactggggttgt 1229

                                                                        
Query: 357  tacgtgtggaaatttccccctggagtcctcatttcaaaggattccgagatgtgtgtacac 416
            ||| ||||||||||| || || |||||||||||||||||| | || ||||||||||||||
Sbjct: 1230 tacatgtggaaattttcctctcgagtcctcatttcaaagggtcccaagatgtgtgtacac 1289

                                                         
Query: 417  ttcaactaggctgtatgagtataggggctgggattcaaaaactgc 461
            ||||||| |  |||||||||| |||||||||||||| ||| ||||
Sbjct: 1290 ttcaacttgcttgtatgagtacaggggctgggattcgaaagctgc 1334
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>dbj|AK069639.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026D01, full
            insert sequence
          Length = 2080

 Score =  184 bits (93), Expect = 2e-43
 Identities = 147/165 (89%)
 Strand = Plus / Plus

                                                                        
Query: 297  tcctgatactgatctcagaactgcaaaagatggagagtatgtgaaggttacaggggttgt 356
            ||||||| ||||||||||||| |||||||||||| |||||||||| ||||| ||||||||
Sbjct: 1170 tcctgatgctgatctcagaacagcaaaagatggacagtatgtgaaagttactggggttgt 1229

                                                                        
Query: 357  tacgtgtggaaatttccccctggagtcctcatttcaaaggattccgagatgtgtgtacac 416
            ||| ||||||||||| || || |||||||||||||||||| | || ||||||||||||||
Sbjct: 1230 tacatgtggaaattttcctctcgagtcctcatttcaaagggtcccaagatgtgtgtacac 1289

                                                         
Query: 417  ttcaactaggctgtatgagtataggggctgggattcaaaaactgc 461
            ||||||| |  |||||||||| |||||||||||||| ||| ||||
Sbjct: 1290 ttcaacttgcttgtatgagtacaggggctgggattcgaaagctgc 1334
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>dbj|AK060252.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-004-D04, full
            insert sequence
          Length = 1786

 Score =  174 bits (88), Expect = 2e-40
 Identities = 139/156 (89%)
 Strand = Plus / Plus

                                                                        
Query: 297  tcctgatactgatctcagaactgcaaaagatggagagtatgtgaaggttacaggggttgt 356
            ||||||| ||||||||||||| |||||| ||||| |||||||||| ||||| ||||||||
Sbjct: 873  tcctgatgctgatctcagaacagcaaaaaatggacagtatgtgaaagttactggggttgt 932

                                                                        
Query: 357  tacgtgtggaaatttccccctggagtcctcatttcaaaggattccgagatgtgtgtacac 416
            ||| ||||||||||| || || |||||||||||||||||| | || ||||||||||||||
Sbjct: 933  tacatgtggaaattttcctctcgagtcctcatttcaaagggtcccaagatgtgtgtacac 992

                                                
Query: 417  ttcaactaggctgtatgagtataggggctgggattc 452
            ||||||| |  |||||||||| ||||||||||||||
Sbjct: 993  ttcaacttgcttgtatgagtacaggggctgggattc 1028
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>emb|AL662968.3|OSJN00168 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035M09,
             complete sequence
          Length = 152732

 Score =  133 bits (67), Expect = 7e-28
 Identities = 127/147 (86%)
 Strand = Plus / Minus

                                                                         
Query: 351   ggttgttacgtgtggaaatttccccctggagtcctcatttcaaaggattccgagatgtgt 410
             ||||||||| |||||||||||||| || |||||||| | ||||||| |||| ||||||||
Sbjct: 81067 ggttgttacttgtggaaatttccctctcgagtcctcgtatcaaagggttccaagatgtgt 81008

                                                                         
Query: 411   gtacacttcaactaggctgtatgagtataggggctgggattcaaaaactgcaaaccccaa 470
             ||||||||||||||   |  |||| |||||||| ||||| |||||| |||| ||| || |
Sbjct: 81007 gtacacttcaactaccttacatgaatataggggttgggactcaaaagctgccaacaccca 80948

                                        
Query: 471   gcatcgccggtttacctggggattacg 497
             ||||| |||||||||||||||||||||
Sbjct: 80947 gcatcaccggtttacctggggattacg 80921



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 153/190 (80%)
 Strand = Plus / Minus

                                                                         
Query: 164   tcttcattcttattgctgttcacaatgcgattgtgctgatagttgttgttgcaatgattg 223
             |||| ||||||| ||||||||||||||| ||| | |||||||||||| | |   || |||
Sbjct: 81474 tcttgattcttagtgctgttcacaatgcaattcttctgatagttgttctggtgctgtttg 81415

                                                                         
Query: 224   gttctgctgctgcacttgtgtcttggaatgtttggcggggcaggagaggcgtgctcaggt 283
             ||| || |||||||||| |   |||||||| |||  |||  |||||||| ||| |  |||
Sbjct: 81414 gttttgttgctgcacttttcatttggaatgcttgctgggcaaggagaggtgtgattgggt 81355

                                                                         
Query: 284   ttgtcaatagctgtcctgatactgatctcagaactgcaaaagatggagagtatgtgaagg 343
             ||||  || ||| | ||||| ||||||| |||||||| ||||||||| ||||| | ||||
Sbjct: 81354 ttgtggatcgctattctgatgctgatctaagaactgctaaagatggacagtatatcaagg 81295

                       
Query: 344   ttacaggggt 353
             ||||||||||
Sbjct: 81294 ttacaggggt 81285



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                         
Query: 8     ctgctgcatcgatgaaggtgcgggccacatcgcttgctcacaaccaggctgttactacac 67
             |||||||||| | ||||  ||||||||||||  || |||| |||||||||||||||| | 
Sbjct: 81630 ctgctgcatccaagaagacgcgggccacatccttttctcataaccaggctgttactaaaa 81571

                   
Query: 68    tcacca 73
             ||||||
Sbjct: 81570 tcacca 81565



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 520   gatttctacatttcagactttcagtctgggct 551
             ||||||||||| ||||| ||||| ||||||||
Sbjct: 80721 gatttctacatctcagattttcaatctgggct 80690
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  133 bits (67), Expect = 7e-28
 Identities = 127/147 (86%)
 Strand = Plus / Minus

                                                                            
Query: 351      ggttgttacgtgtggaaatttccccctggagtcctcatttcaaaggattccgagatgtgt 410
                ||||||||| |||||||||||||| || |||||||| | ||||||| |||| ||||||||
Sbjct: 30677336 ggttgttacttgtggaaatttccctctcgagtcctcgtatcaaagggttccaagatgtgt 30677277

                                                                            
Query: 411      gtacacttcaactaggctgtatgagtataggggctgggattcaaaaactgcaaaccccaa 470
                ||||||||||||||   |  |||| |||||||| ||||| |||||| |||| ||| || |
Sbjct: 30677276 gtacacttcaactaccttacatgaatataggggttgggactcaaaagctgccaacaccca 30677217

                                           
Query: 471      gcatcgccggtttacctggggattacg 497
                ||||| |||||||||||||||||||||
Sbjct: 30677216 gcatcaccggtttacctggggattacg 30677190



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 153/190 (80%)
 Strand = Plus / Minus

                                                                            
Query: 164      tcttcattcttattgctgttcacaatgcgattgtgctgatagttgttgttgcaatgattg 223
                |||| ||||||| ||||||||||||||| ||| | |||||||||||| | |   || |||
Sbjct: 30677743 tcttgattcttagtgctgttcacaatgcaattcttctgatagttgttctggtgctgtttg 30677684

                                                                            
Query: 224      gttctgctgctgcacttgtgtcttggaatgtttggcggggcaggagaggcgtgctcaggt 283
                ||| || |||||||||| |   |||||||| |||  |||  |||||||| ||| |  |||
Sbjct: 30677683 gttttgttgctgcacttttcatttggaatgcttgctgggcaaggagaggtgtgattgggt 30677624

                                                                            
Query: 284      ttgtcaatagctgtcctgatactgatctcagaactgcaaaagatggagagtatgtgaagg 343
                ||||  || ||| | ||||| ||||||| |||||||| ||||||||| ||||| | ||||
Sbjct: 30677623 ttgtggatcgctattctgatgctgatctaagaactgctaaagatggacagtatatcaagg 30677564

                          
Query: 344      ttacaggggt 353
                ||||||||||
Sbjct: 30677563 ttacaggggt 30677554



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                            
Query: 8        ctgctgcatcgatgaaggtgcgggccacatcgcttgctcacaaccaggctgttactacac 67
                |||||||||| | ||||  ||||||||||||  || |||| |||||||||||||||| | 
Sbjct: 30677899 ctgctgcatccaagaagacgcgggccacatccttttctcataaccaggctgttactaaaa 30677840

                      
Query: 68       tcacca 73
                ||||||
Sbjct: 30677839 tcacca 30677834



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 520      gatttctacatttcagactttcagtctgggct 551
                ||||||||||| ||||| ||||| ||||||||
Sbjct: 30676990 gatttctacatctcagattttcaatctgggct 30676959
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>gb|BT017922.1| Zea mays clone EL01N0519C02.c mRNA sequence
          Length = 1074

 Score =  117 bits (59), Expect = 4e-23
 Identities = 149/179 (83%)
 Strand = Plus / Plus

                                                                       
Query: 313 agaactgcaaaagatggagagtatgtgaaggttacaggggttgttacgtgtggaaatttc 372
           ||||||||||||||||||||||||||    ||||| ||||||||||| ||||||||||| 
Sbjct: 18  agaactgcaaaagatggagagtatgttcctgttactggggttgttacttgtggaaatttg 77

                                                                       
Query: 373 cccctggagtcctcatttcaaaggattccgagatgtgtgtacacttcaactaggctgtat 432
           ||||| ||||||||||| ||| || | ||  |||||||||||||||||||| |  |||| 
Sbjct: 78  ccccttgagtcctcattccaacgggtgccacgatgtgtgtacacttcaacttgcttgtac 137

                                                                      
Query: 433 gagtataggggctgggattcaaaaactgcaaaccccaagcatcgccggtttacctgggg 491
           ||||| ||||| ||||| || ||| | |||||| |||  || || |||||||| |||||
Sbjct: 138 gagtacaggggttgggactcgaaagccgcaaacgccacacaccgacggtttacttgggg 196
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  117 bits (59), Expect = 4e-23
 Identities = 98/111 (88%)
 Strand = Plus / Plus

                                                                           
Query: 351     ggttgttacgtgtggaaatttccccctggagtcctcatttcaaaggattccgagatgtgt 410
               ||||||||| ||||||||||| || || |||||||||||||||||| | || ||||||||
Sbjct: 7936841 ggttgttacatgtggaaattttcctctcgagtcctcatttcaaagggtcccaagatgtgt 7936900

                                                                  
Query: 411     gtacacttcaactaggctgtatgagtataggggctgggattcaaaaactgc 461
               ||||||||||||| |  |||||||||| |||||||||||||| ||| ||||
Sbjct: 7936901 gtacacttcaacttgcttgtatgagtacaggggctgggattcgaaagctgc 7936951



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                        
Query: 297     tcctgatactgatctcagaactgcaaaagatggagagtatgtgaaggttacaggggt 353
               ||||||| ||||||||||||| |||||||||||| |||||||||| ||||| |||||
Sbjct: 7936232 tcctgatgctgatctcagaacagcaaaagatggacagtatgtgaaagttactggggt 7936288



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                           
Query: 351     ggttgttacgtgtggaaatttccccctggagtcctcatttcaaaggattccgagatgtgt 410
               ||||||||| | ||||||||| ||| | |||||||||||||||||| |||| |||||| |
Sbjct: 7914215 ggttgttacttatggaaattttcccgtcgagtcctcatttcaaagggttccaagatgttt 7914156

                    
Query: 411     gtaca 415
               |||||
Sbjct: 7914155 gtaca 7914151



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                 
Query: 297     tcctgatactgatctcagaactgcaaaagatgga 330
               ||||||| ||||||| ||||| ||||||||||||
Sbjct: 7914598 tcctgattctgatcttagaacagcaaaagatgga 7914565



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 84      tttctcagttatgggaagcat 104
               |||||||||||||||||||||
Sbjct: 8807059 tttctcagttatgggaagcat 8807039
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>dbj|AP004559.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0461A06
          Length = 136384

 Score =  117 bits (59), Expect = 4e-23
 Identities = 98/111 (88%)
 Strand = Plus / Plus

                                                                        
Query: 351  ggttgttacgtgtggaaatttccccctggagtcctcatttcaaaggattccgagatgtgt 410
            ||||||||| ||||||||||| || || |||||||||||||||||| | || ||||||||
Sbjct: 9011 ggttgttacatgtggaaattttcctctcgagtcctcatttcaaagggtcccaagatgtgt 9070

                                                               
Query: 411  gtacacttcaactaggctgtatgagtataggggctgggattcaaaaactgc 461
            ||||||||||||| |  |||||||||| |||||||||||||| ||| ||||
Sbjct: 9071 gtacacttcaacttgcttgtatgagtacaggggctgggattcgaaagctgc 9121



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                     
Query: 297  tcctgatactgatctcagaactgcaaaagatggagagtatgtgaaggttacaggggt 353
            ||||||| ||||||||||||| |||||||||||| |||||||||| ||||| |||||
Sbjct: 8402 tcctgatgctgatctcagaacagcaaaagatggacagtatgtgaaagttactggggt 8458
to top
>dbj|AP005410.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0038P10
          Length = 148527

 Score =  117 bits (59), Expect = 4e-23
 Identities = 98/111 (88%)
 Strand = Plus / Plus

                                                                          
Query: 351    ggttgttacgtgtggaaatttccccctggagtcctcatttcaaaggattccgagatgtgt 410
              ||||||||| ||||||||||| || || |||||||||||||||||| | || ||||||||
Sbjct: 126732 ggttgttacatgtggaaattttcctctcgagtcctcatttcaaagggtcccaagatgtgt 126791

                                                                 
Query: 411    gtacacttcaactaggctgtatgagtataggggctgggattcaaaaactgc 461
              ||||||||||||| |  |||||||||| |||||||||||||| ||| ||||
Sbjct: 126792 gtacacttcaacttgcttgtatgagtacaggggctgggattcgaaagctgc 126842



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                       
Query: 297    tcctgatactgatctcagaactgcaaaagatggagagtatgtgaaggttacaggggt 353
              ||||||| ||||||||||||| |||||||||||| |||||||||| ||||| |||||
Sbjct: 126123 tcctgatgctgatctcagaacagcaaaagatggacagtatgtgaaagttactggggt 126179



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                          
Query: 351    ggttgttacgtgtggaaatttccccctggagtcctcatttcaaaggattccgagatgtgt 410
              ||||||||| | ||||||||| ||| | |||||||||||||||||| |||| |||||| |
Sbjct: 104106 ggttgttacttatggaaattttcccgtcgagtcctcatttcaaagggttccaagatgttt 104047

                   
Query: 411    gtaca 415
              |||||
Sbjct: 104046 gtaca 104042



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 297    tcctgatactgatctcagaactgcaaaagatgga 330
              ||||||| ||||||| ||||| ||||||||||||
Sbjct: 104489 tcctgattctgatcttagaacagcaaaagatgga 104456
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>emb|BX826707.1|CNS0A432 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB56ZG04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1673

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 340 aaggttacaggggttgttacgtgtggaa 367
           |||||||||||||||||||| |||||||
Sbjct: 825 aaggttacaggggttgttacatgtggaa 852
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>gb|AC133504.2| Mus musculus BAC clone RP24-174N6 from chromosome 15, complete sequence
          Length = 145186

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 320   caaaagatggagagtatgtgaag 342
             |||||||||||||||||||||||
Sbjct: 32841 caaaagatggagagtatgtgaag 32819
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>gb|AC124675.9| Mus musculus chromosome 15, clone RP24-88M7, complete sequence
          Length = 207904

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 320    caaaagatggagagtatgtgaag 342
              |||||||||||||||||||||||
Sbjct: 136012 caaaagatggagagtatgtgaag 135990
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>emb|CT030638.12| Mouse DNA sequence from clone RP23-340M21 on chromosome 14, complete
             sequence
          Length = 223278

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 308   atctcagaactgcaaaagatgga 330
             |||||||||||||||||||||||
Sbjct: 98489 atctcagaactgcaaaagatgga 98511
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>gb|AC005171.3| Arabidopsis thaliana chromosome 2 clone T4E14 map mi310, complete
             sequence
          Length = 138181

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 225   ttctgctgctgcacttgtgtct 246
             ||||||||||||||||||||||
Sbjct: 61876 ttctgctgctgcacttgtgtct 61855
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>ref|XM_629229.1| Dictyostelium discoideum hypothetical protein (DDB0219838), partial
            mRNA
          Length = 2364

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 204  agttgttgttgcaatgattggttctgctgctgc 236
            |||||||| ||||||||||| | ||||||||||
Sbjct: 1503 agttgttgatgcaatgattgctgctgctgctgc 1471
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>ref|XM_480944.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1635

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 84   tttctcagttatgggaagcat 104
            |||||||||||||||||||||
Sbjct: 1144 tttctcagttatgggaagcat 1164
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>gb|BC063483.1| Homo sapiens cDNA clone IMAGE:5242363, partial cds
          Length = 3041

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 31  gccacatcgcttgctcacaac 51
           |||||||||||||||||||||
Sbjct: 551 gccacatcgcttgctcacaac 531
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>emb|AL158167.15| Human DNA sequence from clone RP11-534G20 on chromosome 10 Contains two
              novel genes and the 3' end of the SVIL gene for supervillin
              (archvillin) and a CpG island, complete sequence
          Length = 227744

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 31     gccacatcgcttgctcacaac 51
              |||||||||||||||||||||
Sbjct: 194806 gccacatcgcttgctcacaac 194786
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>gb|AC048383.25| Homo sapiens chromosome 15, clone RP11-543G18, complete sequence
          Length = 192235

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 7      cctgctgcatcgatgaaggtg 27
              |||||||||||||||||||||
Sbjct: 159576 cctgctgcatcgatgaaggtg 159596
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>gb|AC158562.8| Mus musculus chromosome 8, clone RP24-275J2, complete sequence
          Length = 181144

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 234    tgcacttgtgtcttggaatgt 254
              |||||||||||||||||||||
Sbjct: 158788 tgcacttgtgtcttggaatgt 158808
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>gb|AC090495.5| Genomic sequence for Mus musculus, clone RP23-60B7, complete sequence
          Length = 82400

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 313   agaactgcaaaagatggagag 333
             |||||||||||||||||||||
Sbjct: 62660 agaactgcaaaagatggagag 62680
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>gb|AC005743.5| Mus musculus strain 129S6/SvEvTac chromosome 8c1 clone rp21-657p21,
             complete sequence
          Length = 185548

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 234   tgcacttgtgtcttggaatgt 254
             |||||||||||||||||||||
Sbjct: 86535 tgcacttgtgtcttggaatgt 86555
to top
>gb|AC078795.19| Homo sapiens 3 BAC RP11-362K14 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 125445

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 166   ttcattcttattgctgttcac 186
             |||||||||||||||||||||
Sbjct: 73881 ttcattcttattgctgttcac 73901
to top
>dbj|AP004690.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0437G01
          Length = 147101

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 84    tttctcagttatgggaagcat 104
             |||||||||||||||||||||
Sbjct: 84808 tttctcagttatgggaagcat 84788
to top
>dbj|AK103017.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033116N08, full
            insert sequence
          Length = 1500

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 84   tttctcagttatgggaagcat 104
            |||||||||||||||||||||
Sbjct: 1246 tttctcagttatgggaagcat 1266
to top
>dbj|AK072666.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134A15, full
           insert sequence
          Length = 1289

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 84  tttctcagttatgggaagcat 104
           |||||||||||||||||||||
Sbjct: 123 tttctcagttatgggaagcat 143
to top
>gb|AC171338.5| Rhesus Macaque  BAC CH250-526I15 (Children's Hospital Oakland Research
              Institute Rhesus macaque Adult Male BAC Library) complete
              sequence
          Length = 165606

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 434    agtataggggctgggattcaaaaac 458
              ||||||||||||||| |||||||||
Sbjct: 134688 agtataggggctgggtttcaaaaac 134712
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>gb|AC124810.14| Mus musculus chromosome 15, clone RP23-163N4, complete sequence
          Length = 212156

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 77     aaggtggtttctcagttatgggaa 100
              ||||||| ||||||||||||||||
Sbjct: 114814 aaggtggattctcagttatgggaa 114791
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>ref|NM_106536.3| Arabidopsis thaliana unknown protein AT1G78880 mRNA, complete cds
          Length = 2202

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                
Query: 500  cagcagagcggcatgcggtcgatttctacatttcagactttcagtctgggct 551
            |||||||| |||||| ||| || ||||||||||| || || || ||||||||
Sbjct: 1358 cagcagagaggcatgtggtagacttctacatttctgatttccaatctgggct 1409
to top
>ref|NM_118355.1| Arabidopsis thaliana cysteine-type endopeptidase/ ubiquitin
           thiolesterase AT4G22290 mRNA, complete cds
          Length = 2925

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 340 aaggttacaggggttgttacgtgtggaa 367
           ||||||||||||||||| || |||||||
Sbjct: 766 aaggttacaggggttgtgacatgtggaa 793
to top
>gb|AC167138.6| Mus musculus chromosome 15, clone RP24-358O3, complete sequence
          Length = 190097

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 77    aaggtggtttctcagttatgggaa 100
             ||||||| ||||||||||||||||
Sbjct: 23180 aaggtggattctcagttatgggaa 23157
to top
>gb|AC005203.1| Homo sapiens chromosome 16, cosmid clone RT70 (LANL), complete sequence
          Length = 41308

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 258   gcggggcaggagaggcgtgc 277
             ||||||||||||||||||||
Sbjct: 10259 gcggggcaggagaggcgtgc 10278
to top
>gb|AC166939.2| Mus musculus BAC clone RP23-72K19 from chromosome 8, complete sequence
          Length = 236510

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 81     tggtttctcagttatgggaa 100
              ||||||||||||||||||||
Sbjct: 220405 tggtttctcagttatgggaa 220386
to top
>gb|AC109162.12| Mus musculus chromosome 7, clone RP24-177G14, complete sequence
          Length = 176990

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 172   cttattgctgttcacaatgc 191
             ||||||||||||||||||||
Sbjct: 69449 cttattgctgttcacaatgc 69430
to top
>gb|AC122890.4| Mus musculus BAC clone RP23-63O14 from 8, complete sequence
          Length = 209359

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    tggtttctcagttatgggaa 100
             ||||||||||||||||||||
Sbjct: 82798 tggtttctcagttatgggaa 82779
to top
>gb|AF540004.1| Caenorhabditis briggsae mesocentin (dig-1) gene, complete cds
          Length = 58156

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 323   aagatggagagtatgtgaag 342
             ||||||||||||||||||||
Sbjct: 32490 aagatggagagtatgtgaag 32509
to top
>emb|AL160159.12| Human DNA sequence from clone RP11-71K7 on chromosome 13, complete
              sequence
          Length = 129575

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 366    aaatttccccctggagtcct 385
              ||||||||||||||||||||
Sbjct: 109969 aaatttccccctggagtcct 109988
to top
>gb|BT000364.1| Arabidopsis thaliana unknown protein (At1g78880) mRNA, complete cds
          Length = 1434

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                
Query: 500  cagcagagcggcatgcggtcgatttctacatttcagactttcagtctgggct 551
            |||||||| |||||| ||| || ||||||||||| || || || ||||||||
Sbjct: 995  cagcagagaggcatgtggtagacttctacatttctgatttccaatctgggct 1046
to top
>gb|AY096686.1| Arabidopsis thaliana unknown protein (At1g78880) mRNA, complete cds
          Length = 1438

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                
Query: 500  cagcagagcggcatgcggtcgatttctacatttcagactttcagtctgggct 551
            |||||||| |||||| ||| || ||||||||||| || || || ||||||||
Sbjct: 995  cagcagagaggcatgtggtagacttctacatttctgatttccaatctgggct 1046
to top
>gb|AY072176.1| Arabidopsis thaliana unknown protein (At1g78880) mRNA, complete cds
          Length = 2187

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                
Query: 500  cagcagagcggcatgcggtcgatttctacatttcagactttcagtctgggct 551
            |||||||| |||||| ||| || ||||||||||| || || || ||||||||
Sbjct: 1357 cagcagagaggcatgtggtagacttctacatttctgatttccaatctgggct 1408
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>emb|CR356241.8| Zebrafish DNA sequence from clone DKEY-90M21 in linkage group 19,
             complete sequence
          Length = 74299

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 304   actgatctcagaactgcaaa 323
             ||||||||||||||||||||
Sbjct: 21870 actgatctcagaactgcaaa 21889
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>gb|AY140104.1| Arabidopsis thaliana unknown protein mRNA, complete cds
          Length = 1717

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 340 aaggttacaggggttgttacgtgtggaa 367
           ||||||||||||||||| || |||||||
Sbjct: 852 aaggttacaggggttgtgacatgtggaa 879
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>gb|AY120734.1| Arabidopsis thaliana unknown protein (At1g78880) mRNA, complete cds
          Length = 2166

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                
Query: 500  cagcagagcggcatgcggtcgatttctacatttcagactttcagtctgggct 551
            |||||||| |||||| ||| || ||||||||||| || || || ||||||||
Sbjct: 1358 cagcagagaggcatgtggtagacttctacatttctgatttccaatctgggct 1409
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>dbj|AK126850.1| Homo sapiens cDNA FLJ44902 fis, clone BRAMY3004364
          Length = 3328

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 258  gcggggcaggagaggcgtgc 277
            ||||||||||||||||||||
Sbjct: 2616 gcggggcaggagaggcgtgc 2635
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>dbj|AK095412.1| Homo sapiens cDNA FLJ38093 fis, clone CTONG2027361
          Length = 2777

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 258  gcggggcaggagaggcgtgc 277
            ||||||||||||||||||||
Sbjct: 2073 gcggggcaggagaggcgtgc 2092
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>gb|BT006592.1| Arabidopsis thaliana At4g22290 mRNA, complete cds
          Length = 1338

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 340 aaggttacaggggttgttacgtgtggaa 367
           ||||||||||||||||| || |||||||
Sbjct: 766 aaggttacaggggttgtgacatgtggaa 793
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>gb|AC006111.4| Homo sapiens chromosome 16 clone RP11-461A8, complete sequence
          Length = 190814

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 258    gcggggcaggagaggcgtgc 277
              ||||||||||||||||||||
Sbjct: 121100 gcggggcaggagaggcgtgc 121119
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>emb|BX827002.1|CNS0A4AI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB85ZC10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1702

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 340 aaggttacaggggttgttacgtgtggaa 367
           ||||||||||||||||| || |||||||
Sbjct: 834 aaggttacaggggttgtgacatgtggaa 861
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>emb|BX827259.1|CNS0A2E0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS2ZA05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1669

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 340 aaggttacaggggttgttacgtgtggaa 367
           ||||||||||||||||| || |||||||
Sbjct: 826 aaggttacaggggttgtgacatgtggaa 853
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>emb|BX648480.1|HSM808628 Homo sapiens mRNA; cDNA DKFZp686H0155 (from clone DKFZp686H0155)
          Length = 4533

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 258  gcggggcaggagaggcgtgc 277
            ||||||||||||||||||||
Sbjct: 2402 gcggggcaggagaggcgtgc 2421
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>emb|BX648257.1|HSM808405 Homo sapiens mRNA; cDNA DKFZp686E23115 (from clone DKFZp686E23115)
          Length = 6745

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 258  gcggggcaggagaggcgtgc 277
            ||||||||||||||||||||
Sbjct: 6027 gcggggcaggagaggcgtgc 6046
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 16      tcgatgaaggtgcgggccac 35
               ||||||||||||||||||||
Sbjct: 3147258 tcgatgaaggtgcgggccac 3147239
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>gb|AC148976.3| Mus musculus BAC clone RP23-391I5 from 7, complete sequence
          Length = 199824

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 212   ttgcaatgattggttctgct 231
             ||||||||||||||||||||
Sbjct: 89002 ttgcaatgattggttctgct 89021


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,763,774
Number of Sequences: 3902068
Number of extensions: 4763774
Number of successful extensions: 90893
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90717
Number of HSP's gapped (non-prelim): 169
length of query: 559
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 536
effective length of database: 17,143,297,704
effective search space: 9188807569344
effective search space used: 9188807569344
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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