ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags9g22 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK063765.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B05, full insert sequence Length = 2215 Score = 650 bits (328), Expect = 0.0 Identities = 560/632 (88%), Gaps = 4/632 (0%) Strand = Plus / Plus Query: 1 ttggttgttggtggattggaccgtgtctatgaaattgggaagcagttcaggnaatgaagg 60 ||||||||||| || |||| ||||| |||||||||||||||||||||||| |||||||| Sbjct: 1111 ttggttgttggggggctggatcgtgtttatgaaattgggaagcagttcagg-aatgaagg 1169 Query: 61 gattgatttaacacacaatcctgaattcacaacagttgagttttatatggcttatgcaga 120 ||||| | || ||||||||||||||||||||| ||| ||||||||||| |||||||| Sbjct: 1170 aattgacctgacgcacaatcctgaattcacaacatgtgaattttatatggcatatgcaga 1229 Query: 121 ttacaatgacttgatggagcttactgaagccatgatatctggtatggttaaggagctgac 180 ||||||||||||||| |||||||||||| ||||| |||||||||||||||||||| |||| Sbjct: 1230 ttacaatgacttgatagagcttactgaaaccatgttatctggtatggttaaggagttgac 1289 Query: 181 aggtgggtataagatcaaatatcatgccaatggagttgataatccaccgatagagattga 240 |||||| || ||||| ||||||||||| || |||||||| || ||||| ||||||||||| Sbjct: 1290 aggtggctacaagattaaatatcatgctaacggagttgagaaaccaccaatagagattga 1349 Query: 241 tttcacacctccctttagaaggatagacatgatcgaaggattggaagctatggccaaact 300 ||||||||||||||| |||| |||||||||||| |||| ||| || |||||||| ||||| Sbjct: 1350 tttcacacctcccttcagaaagatagacatgattgaagaattagaggctatggctaaact 1409 Query: 301 ggagataccgaaagatatttccagtgatgaaacaaacaagtatctgatagatgcatgtgc 360 | ||||| |||||| | || ||||||||| ||||||||||| |||||||||| ||||| Sbjct: 1410 caatatacctaaagatctctcaagtgatgaagcaaacaagtatttgatagatgcctgtgc 1469 Query: 361 taagtatgatgttaaatgtccacctccccagacaacaacacggttgcttgacaagctagt 420 || |||||||| | ||| |||||||||||||| ||||||||||||||||| |||||||| Sbjct: 1470 caaatatgatgtcagatgcccacctccccagactacaacacggttgcttgataagctagt 1529 Query: 421 gggccatttcttggaggagacatgtgtgaacccaacatttattatcaaccacccagagat 480 ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||| Sbjct: 1530 tggccatttcttggaggagacatgtgtgaatcccacgtttattatcaaccatccagagat 1589 Query: 481 aatgagtccattggcaaagtggcataggtcccgacctggtttgacagnaaaggtttgagc 540 |||||||||||||||||||||||||||||| |||||||| ||||| | | |||||||||| Sbjct: 1590 aatgagtccattggcaaagtggcataggtctcgacctggattgactg-agaggtttgagc 1648 Query: 541 tctttgttaacaaacatggaggtgtgcaatgcctacacagagttgaacgatccttgtcgt 600 ||||||||||||| ||| |||||||||||||| || |||||||| || ||||| ||| || Sbjct: 1649 tctttgttaacaagcat-gaggtgtgcaatgcatatacagagttaaatgatcc-tgttgt 1706 Query: 601 gcaaaggcaacggtttgaggaacaactgaagg 632 || ||||||||||||||||||||||| |||| Sbjct: 1707 tcagaggcaacggtttgaggaacaactaaagg 1738
>dbj|AK099302.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143D06, full insert sequence Length = 2164 Score = 626 bits (316), Expect = e-176 Identities = 558/632 (88%), Gaps = 5/632 (0%) Strand = Plus / Plus Query: 1 ttggttgttggtggattggaccgtgtctatgaaattgggaagcagttcaggnaatgaagg 60 ||||||||||| || |||| ||||| |||||||||||||||||||||||| |||||||| Sbjct: 1112 ttggttgttggggggctggatcgtgtttatgaaattgggaagcagttcagg-aatgaagg 1170 Query: 61 gattgatttaacacacaatcctgaattcacaacagttgagttttatatggcttatgcaga 120 ||||| | || ||||||||||||||||||||| ||| ||||||||||| |||||||| Sbjct: 1171 aattgacctgacgcacaatcctgaattcacaacatgtgaattttatatggcatatgcaga 1230 Query: 121 ttacaatgacttgatggagcttactgaagccatgatatctggtatggttaaggagctgac 180 ||||||||||||||| |||||||||||| ||||| |||||||||||||||||||| |||| Sbjct: 1231 ttacaatgacttgatagagcttactgaaaccatgttatctggtatggttaaggagttgac 1290 Query: 181 aggtgggtataagatcaaatatcatgccaatggagttgataatccaccgatagagattga 240 |||||| || ||||| ||||||||||| || |||||||| || ||||| ||||||||||| Sbjct: 1291 aggtggctacaagattaaatatcatgctaacggagttgagaaaccaccaatagagattga 1350 Query: 241 tttcacacctccctttagaaggatagacatgatcgaaggattggaagctatggccaaact 300 || |||||||||||| |||| ||||||| |||| |||| ||| || |||||||| ||||| Sbjct: 1351 ttccacacctcccttcagaaagatagacgtgattgaagaattagaggctatggctaaact 1410 Query: 301 ggagataccgaaagatatttccagtgatgaaacaaacaagtatctgatagatgcatgtgc 360 | ||||| |||||| | | ||||||||| ||||||||||| |||||||||| ||||| Sbjct: 1411 caatatacctaaagatctcta-agtgatgaagcaaacaagtatttgatagatgcctgtgc 1469 Query: 361 taagtatgatgttaaatgtccacctccccagacaacaacacggttgcttgacaagctagt 420 || |||||||| ||||| |||||||||||||| ||||||||||||||||| |||||||| Sbjct: 1470 caaatatgatgtcaaatgcccacctccccagactacaacacggttgcttgataagctagt 1529 Query: 421 gggccatttcttggaggagacatgtgtgaacccaacatttattatcaaccacccagagat 480 ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||| Sbjct: 1530 tggccatttcttggaggagacatgtgtgaatcccacgtttattatcaaccatccagagat 1589 Query: 481 aatgagtccattggcaaagtggcataggtcccgacctggtttgacagnaaaggtttgagc 540 |||||||||||||||||||||||||||||| |||||||| ||||| | | |||||||||| Sbjct: 1590 aatgagtccattggcaaagtggcataggtctcgacctggattgactg-agaggtttgagc 1648 Query: 541 tctttgttaacaaacatggaggtgtgcaatgcctacacagagttgaacgatccttgtcgt 600 ||||||||||||| ||| |||||||||||||| || |||||||| || ||||| ||| || Sbjct: 1649 tctttgttaacaagcat-gaggtgtgcaatgcatatacagagttaaatgatcc-tgttgt 1706 Query: 601 gcaaaggcaacggtttgaggaacaactgaagg 632 || ||||||||||||||||||||||| |||| Sbjct: 1707 tcagaggcaacggtttgaggaacaactaaagg 1738
>gb|AY103979.1| Zea mays PCO072809 mRNA sequence Length = 2220 Score = 577 bits (291), Expect = e-161 Identities = 550/631 (87%), Gaps = 4/631 (0%) Strand = Plus / Plus Query: 2 tggttgttggtggattggaccgtgtctatgaaattgggaagcagttcaggnaatgaaggg 61 ||||||||||||||||||||||||| ||||||||||| ||||| |||||| |||||||| Sbjct: 1099 tggttgttggtggattggaccgtgtttatgaaattggaaagcaattcagg-aatgaagga 1157 Query: 62 attgatttaacacacaatcctgaattcacaacagttgagttttatatggcttatgcagat 121 |||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||| Sbjct: 1158 attgatttaacacacaatcctgaattcacaacttgtgaattttatatggcgtatgcagat 1217 Query: 122 tacaatgacttgatggagcttactgaagccatgatatctggtatggttaaggagctgaca 181 || ||||| |||||||||||||||||| ||||| | || || ||||||||||| |||||| Sbjct: 1218 tataatgatttgatggagcttactgaaaccatgttgtcaggcatggttaaggacctgaca 1277 Query: 182 ggtgggtataagatcaaatatcatgccaatggagttgataatccaccgatagagattgat 241 ||||| |||||||| ||||||||||| ||||||||| ||| || || ||||| |||||| Sbjct: 1278 ggtggctataagataaaatatcatgcaaatggagttactaaccccccaatagaaattgat 1337 Query: 242 ttcacacctccctttagaaggatagacatgatcgaaggattggaagctatggccaaactg 301 ||||| |||||||| ||||||||||| ||||| ||| ||||| ||||||||||| || Sbjct: 1338 ttcacgcctcccttcagaaggatagatatgattaaagatttggaggctatggccaatctc 1397 Query: 302 gagataccgaaagatatttccagtgatgaaacaaacaagtatctgatagatgcatgtgct 361 ||||| |||||| | || ||||||||| | || ||| ||||||| ||||||| Sbjct: 1398 agtataccaaaagatctatcaagtgatgaagcgaatcgttatttgatagaagcatgtgtg 1457 Query: 362 aagtatgatgttaaatgtccacctccccagacaacaacacggttgcttgacaagctagtg 421 ||||||||||| ||||||||||||||||| || ||| | ||||||||||||||| | || Sbjct: 1458 aagtatgatgtgaaatgtccacctccccaaacgacatcgcggttgcttgacaagttggtt 1517 Query: 422 ggccatttcttggaggagacatgtgtgaacccaacatttattatcaaccacccagagata 481 ||||||||||||||||||||||||||||| ||||||||||| ||||| || ||||||||| Sbjct: 1518 ggccatttcttggaggagacatgtgtgaatccaacatttatcatcaatcatccagagata 1577 Query: 482 atgagtccattggcaaagtggcataggtcccgacctggtttgacagnaaaggtttgagct 541 ||||||||||| |||||||||||||||||||||||||| ||||| | | ||||| ||| | Sbjct: 1578 atgagtccattagcaaagtggcataggtcccgacctggattgactg-agaggttcgagtt 1636 Query: 542 ctttgttaacaaacatggaggtgtgcaatgcctacacagagttgaacgatccttgtcgtg 601 ||||||||||||||| ||||||||||| || |||||||||||||||||||| ||| ||| Sbjct: 1637 gtttgttaacaaacat-gaggtgtgcaacgcatacacagagttgaacgatcc-tgttgtg 1694 Query: 602 caaaggcaacggtttgaggaacaactgaagg 632 || ||||||||||||||||||||||| |||| Sbjct: 1695 cagaggcaacggtttgaggaacaactaaagg 1725
>gb|BT018881.1| Zea mays clone EL01T0203E10.d mRNA sequence Length = 2292 Score = 555 bits (280), Expect = e-155 Identities = 549/632 (86%), Gaps = 5/632 (0%) Strand = Plus / Plus Query: 2 tggttgttggtggattggaccgtgtctatgaaattgggaagcagttcaggnaatgaaggg 61 ||||||||||||||||||||||||| ||||||||||| ||||| |||| | |||||||| Sbjct: 1078 tggttgttggtggattggaccgtgtttatgaaattggaaagcaattcatg-aatgaagga 1136 Query: 62 attgatttaacacacaatcctgaattcacaacagttgagttttatatggcttatgcagat 121 |||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||| Sbjct: 1137 attgatttaacacacaatcctgaattcacaacttgtgaattttatatggcgtatgcagat 1196 Query: 122 tacaatgacttgatggagcttactgaagccatgatatctggtatggttaaggagctgaca 181 || ||||| |||||||||||||||||| ||||| | || || ||||||||||| |||||| Sbjct: 1197 tataatgatttgatggagcttactgaaaccatgttgtcaggcatggttaaggacctgaca 1256 Query: 182 ggtgggtataagatcaaatatcatgccaatggagttgataatccaccgatagagattgat 241 ||||| |||||||| ||||||||||| ||||||||| ||| || || ||||| |||||| Sbjct: 1257 ggtggctataagataaaatatcatgcaaatggagttactaaccccccaatagaaattgat 1316 Query: 242 ttcacacctccctttagaaggatagacatgatcgaaggattggaagctatggccaaactg 301 ||||| |||||||| ||||||||||| ||||| ||| ||||| ||||||||||| || Sbjct: 1317 ttcacgcctcccttcagaaggatagatatgattaaagatttggaggctatggccaatctc 1376 Query: 302 gagataccgaaagatatttccagtgatgaaacaaacaagtatctgatagatgcatg-tgc 360 ||||| |||||| | || ||||||||| | || ||| ||||||| ||||| || Sbjct: 1377 agtataccaaaagatctatcaagtgatgaagcgaatcgttatttgatagaagcatggtgt 1436 Query: 361 taagtatgatgttaaatgtccacctccccagacaacaacacggttgcttgacaagctagt 420 ||||||||||| ||||||||||||||||| || ||| | ||||||||||||||| | || Sbjct: 1437 gaagtatgatgtgaaatgtccacctccccaaacgacatcgcggttgcttgacaagttggt 1496 Query: 421 gggccatttcttggaggagacatgtgtgaacccaacatttattatcaaccacccagagat 480 ||||||||||||||||||||||||||||| ||||||||||| ||||| || |||||||| Sbjct: 1497 tggccatttcttggaggagacatgtgtgaatccaacatttatcatcaatcatccagagat 1556 Query: 481 aatgagtccattggcaaagtggcataggtcccgacctggtttgacagnaaaggtttgagc 540 |||||||||||| |||||||||||||||||||||||||| ||||| | | ||||| ||| Sbjct: 1557 aatgagtccattagcaaagtggcataggtcccgacctggattgactg-agaggttcgagt 1615 Query: 541 tctttgttaacaaacatggaggtgtgcaatgcctacacagagttgaacgatccttgtcgt 600 | ||||||||||||||| ||||||||||| || |||||||||||||||||||| ||| || Sbjct: 1616 tgtttgttaacaaacat-gaggtgtgcaacgcatacacagagttgaacgatcc-tgttgt 1673 Query: 601 gcaaaggcaacggtttgaggaacaactgaagg 632 ||| ||||||||||||||||||||||| |||| Sbjct: 1674 gcagaggcaacggtttgaggaacaactaaagg 1705
>gb|BT008978.1| Triticum aestivum clone wdk2c.pk005.h13:fis, full insert mRNA sequence Length = 702 Score = 355 bits (179), Expect = 1e-94 Identities = 218/227 (96%), Gaps = 3/227 (1%) Strand = Plus / Plus Query: 406 gcttgacaagctagtgggccatttcttggaggagacatgtgtgaacccaacatttattat 465 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 8 gcttgacaagctagtgggccatttcttggaggaaacatgtgtgaacccaacatttattat 67 Query: 466 caaccacccagagataatgagtccattggcaaagtggcataggtcccgacctggtttgac 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 68 caaccacccagagataatgagtccattggcaaagtggcataggtcccgacctgggttgac 127 Query: 526 agnaaaggtttgagctctttgttaacaaacatggaggtgtgcaatgcctacacagagttg 585 || |||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 128 ag-aaaggtttgagctctttgttaacaaaca-cgaggtgtgcaatgcctacactgagttg 185 Query: 586 aacgatccttgtcgtgcaaaggcaacggtttgaggaacaactgaagg 632 |||||||| ||| ||||||||||||||||||||||||||||| |||| Sbjct: 186 aacgatcc-tgttgtgcaaaggcaacggtttgaggaacaactaaagg 231
>gb|AC133003.3| Oryza sativa chromosome 3 BAC OSJNBa0010D22 genomic sequence, complete sequence Length = 190055 Score = 192 bits (97), Expect = 1e-45 Identities = 134/145 (92%), Gaps = 1/145 (0%) Strand = Plus / Minus Query: 414 agctagtgggccatttcttggaggagacatgtgtgaacccaacatttattatcaaccacc 473 ||||||| ||||||||||||||||||||||||||||| || || |||||||||||||| | Sbjct: 167955 agctagttggccatttcttggaggagacatgtgtgaatcccacgtttattatcaaccatc 167896 Query: 474 cagagataatgagtccattggcaaagtggcataggtcccgacctggtttgacagnaaagg 533 ||||||||||||||||||||||||||||||||||||| |||||||| ||||| | | ||| Sbjct: 167895 cagagataatgagtccattggcaaagtggcataggtctcgacctggattgactg-agagg 167837 Query: 534 tttgagctctttgttaacaaacatg 558 |||||||||||||||||||| |||| Sbjct: 167836 tttgagctctttgttaacaagcatg 167812 Score = 172 bits (87), Expect = 9e-40 Identities = 145/163 (88%), Gaps = 1/163 (0%) Strand = Plus / Minus Query: 1 ttggttgttggtggattggaccgtgtctatgaaattgggaagcagttcaggnaatgaagg 60 ||||||||||| || |||| ||||| |||||||||||||||||||||||| |||||||| Sbjct: 169056 ttggttgttggggggctggatcgtgtttatgaaattgggaagcagttcagg-aatgaagg 168998 Query: 61 gattgatttaacacacaatcctgaattcacaacagttgagttttatatggcttatgcaga 120 ||||| | || ||||||||||||||||||||| ||| ||||||||||| |||||||| Sbjct: 168997 aattgacctgacgcacaatcctgaattcacaacatgtgaattttatatggcatatgcaga 168938 Query: 121 ttacaatgacttgatggagcttactgaagccatgatatctggt 163 ||||||||||||||| |||||||||||| ||||| |||||||| Sbjct: 168937 ttacaatgacttgatagagcttactgaaaccatgttatctggt 168895 Score = 141 bits (71), Expect = 3e-30 Identities = 134/155 (86%) Strand = Plus / Minus Query: 257 agaaggatagacatgatcgaaggattggaagctatggccaaactggagataccgaaagat 316 |||| |||||||||||| |||| ||| || |||||||| ||||| | ||||| |||||| Sbjct: 168449 agaaagatagacatgattgaagaattagaggctatggctaaactcaatatacctaaagat 168390 Query: 317 atttccagtgatgaaacaaacaagtatctgatagatgcatgtgctaagtatgatgttaaa 376 | || ||||||||| ||||||||||| |||||||||| ||||| || |||||||| ||| Sbjct: 168389 ctctcaagtgatgaagcaaacaagtatttgatagatgcctgtgccaaatatgatgtcaaa 168330 Query: 377 tgtccacctccccagacaacaacacggttgcttga 411 || |||||||||||||| ||||||||||||||||| Sbjct: 168329 tgcccacctccccagactacaacacggttgcttga 168295 Score = 117 bits (59), Expect = 5e-23 Identities = 86/95 (90%) Strand = Plus / Minus Query: 161 ggtatggttaaggagctgacaggtgggtataagatcaaatatcatgccaatggagttgat 220 ||||||||||||||| |||||||||| || ||||| ||||||||||| || |||||||| Sbjct: 168650 ggtatggttaaggagttgacaggtggctacaagattaaatatcatgctaacggagttgag 168591 Query: 221 aatccaccgatagagattgatttcacacctccctt 255 || ||||| |||||||||||||||||||||||||| Sbjct: 168590 aaaccaccaatagagattgatttcacacctccctt 168556 Score = 65.9 bits (33), Expect = 2e-07 Identities = 64/73 (87%), Gaps = 1/73 (1%) Strand = Plus / Minus Query: 560 aggtgtgcaatgcctacacagagttgaacgatccttgtcgtgcaaaggcaacggtttgag 619 ||||||||||||| || |||||||| || |||||| || || || ||||||||||||||| Sbjct: 167730 aggtgtgcaatgcatatacagagttaaatgatcct-gttgttcagaggcaacggtttgag 167672 Query: 620 gaacaactgaagg 632 |||||||| |||| Sbjct: 167671 gaacaactaaagg 167659
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 192 bits (97), Expect = 1e-45 Identities = 134/145 (92%), Gaps = 1/145 (0%) Strand = Plus / Minus Query: 414 agctagtgggccatttcttggaggagacatgtgtgaacccaacatttattatcaaccacc 473 ||||||| ||||||||||||||||||||||||||||| || || |||||||||||||| | Sbjct: 21475044 agctagttggccatttcttggaggagacatgtgtgaatcccacgtttattatcaaccatc 21474985 Query: 474 cagagataatgagtccattggcaaagtggcataggtcccgacctggtttgacagnaaagg 533 ||||||||||||||||||||||||||||||||||||| |||||||| ||||| | | ||| Sbjct: 21474984 cagagataatgagtccattggcaaagtggcataggtctcgacctggattgactg-agagg 21474926 Query: 534 tttgagctctttgttaacaaacatg 558 |||||||||||||||||||| |||| Sbjct: 21474925 tttgagctctttgttaacaagcatg 21474901 Score = 172 bits (87), Expect = 9e-40 Identities = 145/163 (88%), Gaps = 1/163 (0%) Strand = Plus / Minus Query: 1 ttggttgttggtggattggaccgtgtctatgaaattgggaagcagttcaggnaatgaagg 60 ||||||||||| || |||| ||||| |||||||||||||||||||||||| |||||||| Sbjct: 21476145 ttggttgttggggggctggatcgtgtttatgaaattgggaagcagttcagg-aatgaagg 21476087 Query: 61 gattgatttaacacacaatcctgaattcacaacagttgagttttatatggcttatgcaga 120 ||||| | || ||||||||||||||||||||| ||| ||||||||||| |||||||| Sbjct: 21476086 aattgacctgacgcacaatcctgaattcacaacatgtgaattttatatggcatatgcaga 21476027 Query: 121 ttacaatgacttgatggagcttactgaagccatgatatctggt 163 ||||||||||||||| |||||||||||| ||||| |||||||| Sbjct: 21476026 ttacaatgacttgatagagcttactgaaaccatgttatctggt 21475984 Score = 141 bits (71), Expect = 3e-30 Identities = 134/155 (86%) Strand = Plus / Minus Query: 257 agaaggatagacatgatcgaaggattggaagctatggccaaactggagataccgaaagat 316 |||| |||||||||||| |||| ||| || |||||||| ||||| | ||||| |||||| Sbjct: 21475538 agaaagatagacatgattgaagaattagaggctatggctaaactcaatatacctaaagat 21475479 Query: 317 atttccagtgatgaaacaaacaagtatctgatagatgcatgtgctaagtatgatgttaaa 376 | || ||||||||| ||||||||||| |||||||||| ||||| || |||||||| ||| Sbjct: 21475478 ctctcaagtgatgaagcaaacaagtatttgatagatgcctgtgccaaatatgatgtcaaa 21475419 Query: 377 tgtccacctccccagacaacaacacggttgcttga 411 || |||||||||||||| ||||||||||||||||| Sbjct: 21475418 tgcccacctccccagactacaacacggttgcttga 21475384 Score = 117 bits (59), Expect = 5e-23 Identities = 86/95 (90%) Strand = Plus / Minus Query: 161 ggtatggttaaggagctgacaggtgggtataagatcaaatatcatgccaatggagttgat 220 ||||||||||||||| |||||||||| || ||||| ||||||||||| || |||||||| Sbjct: 21475739 ggtatggttaaggagttgacaggtggctacaagattaaatatcatgctaacggagttgag 21475680 Query: 221 aatccaccgatagagattgatttcacacctccctt 255 || ||||| |||||||||||||||||||||||||| Sbjct: 21475679 aaaccaccaatagagattgatttcacacctccctt 21475645 Score = 65.9 bits (33), Expect = 2e-07 Identities = 64/73 (87%), Gaps = 1/73 (1%) Strand = Plus / Minus Query: 560 aggtgtgcaatgcctacacagagttgaacgatccttgtcgtgcaaaggcaacggtttgag 619 ||||||||||||| || |||||||| || |||||| || || || ||||||||||||||| Sbjct: 21474819 aggtgtgcaatgcatatacagagttaaatgatcct-gttgttcagaggcaacggtttgag 21474761 Query: 620 gaacaactgaagg 632 |||||||| |||| Sbjct: 21474760 gaacaactaaagg 21474748
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 192 bits (97), Expect = 1e-45 Identities = 134/145 (92%), Gaps = 1/145 (0%) Strand = Plus / Minus Query: 414 agctagtgggccatttcttggaggagacatgtgtgaacccaacatttattatcaaccacc 473 ||||||| ||||||||||||||||||||||||||||| || || |||||||||||||| | Sbjct: 21468073 agctagttggccatttcttggaggagacatgtgtgaatcccacgtttattatcaaccatc 21468014 Query: 474 cagagataatgagtccattggcaaagtggcataggtcccgacctggtttgacagnaaagg 533 ||||||||||||||||||||||||||||||||||||| |||||||| ||||| | | ||| Sbjct: 21468013 cagagataatgagtccattggcaaagtggcataggtctcgacctggattgactg-agagg 21467955 Query: 534 tttgagctctttgttaacaaacatg 558 |||||||||||||||||||| |||| Sbjct: 21467954 tttgagctctttgttaacaagcatg 21467930 Score = 172 bits (87), Expect = 9e-40 Identities = 145/163 (88%), Gaps = 1/163 (0%) Strand = Plus / Minus Query: 1 ttggttgttggtggattggaccgtgtctatgaaattgggaagcagttcaggnaatgaagg 60 ||||||||||| || |||| ||||| |||||||||||||||||||||||| |||||||| Sbjct: 21469174 ttggttgttggggggctggatcgtgtttatgaaattgggaagcagttcagg-aatgaagg 21469116 Query: 61 gattgatttaacacacaatcctgaattcacaacagttgagttttatatggcttatgcaga 120 ||||| | || ||||||||||||||||||||| ||| ||||||||||| |||||||| Sbjct: 21469115 aattgacctgacgcacaatcctgaattcacaacatgtgaattttatatggcatatgcaga 21469056 Query: 121 ttacaatgacttgatggagcttactgaagccatgatatctggt 163 ||||||||||||||| |||||||||||| ||||| |||||||| Sbjct: 21469055 ttacaatgacttgatagagcttactgaaaccatgttatctggt 21469013 Score = 141 bits (71), Expect = 3e-30 Identities = 134/155 (86%) Strand = Plus / Minus Query: 257 agaaggatagacatgatcgaaggattggaagctatggccaaactggagataccgaaagat 316 |||| |||||||||||| |||| ||| || |||||||| ||||| | ||||| |||||| Sbjct: 21468567 agaaagatagacatgattgaagaattagaggctatggctaaactcaatatacctaaagat 21468508 Query: 317 atttccagtgatgaaacaaacaagtatctgatagatgcatgtgctaagtatgatgttaaa 376 | || ||||||||| ||||||||||| |||||||||| ||||| || |||||||| ||| Sbjct: 21468507 ctctcaagtgatgaagcaaacaagtatttgatagatgcctgtgccaaatatgatgtcaaa 21468448 Query: 377 tgtccacctccccagacaacaacacggttgcttga 411 || |||||||||||||| ||||||||||||||||| Sbjct: 21468447 tgcccacctccccagactacaacacggttgcttga 21468413 Score = 117 bits (59), Expect = 5e-23 Identities = 86/95 (90%) Strand = Plus / Minus Query: 161 ggtatggttaaggagctgacaggtgggtataagatcaaatatcatgccaatggagttgat 220 ||||||||||||||| |||||||||| || ||||| ||||||||||| || |||||||| Sbjct: 21468768 ggtatggttaaggagttgacaggtggctacaagattaaatatcatgctaacggagttgag 21468709 Query: 221 aatccaccgatagagattgatttcacacctccctt 255 || ||||| |||||||||||||||||||||||||| Sbjct: 21468708 aaaccaccaatagagattgatttcacacctccctt 21468674 Score = 65.9 bits (33), Expect = 2e-07 Identities = 64/73 (87%), Gaps = 1/73 (1%) Strand = Plus / Minus Query: 560 aggtgtgcaatgcctacacagagttgaacgatccttgtcgtgcaaaggcaacggtttgag 619 ||||||||||||| || |||||||| || |||||| || || || ||||||||||||||| Sbjct: 21467848 aggtgtgcaatgcatatacagagttaaatgatcct-gttgttcagaggcaacggtttgag 21467790 Query: 620 gaacaactgaagg 632 |||||||| |||| Sbjct: 21467789 gaacaactaaagg 21467777
>emb|AJ299251.1|NTA299251 Nicotiana tabacum partial mRNA for lysyl-tRNA synthetase (lysRS gene) Length = 702 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 434 gaggagacatgtgtgaacccaacatttattatcaaccacccagagataatgagtccattg 493 |||||||||||||| ||||| || ||||| |||||||| || |||||||||||||| ||| Sbjct: 1 gaggagacatgtgttaaccctacttttatcatcaaccatcccgagataatgagtcctttg 60 Query: 494 gcaaagtggca 504 ||||||||||| Sbjct: 61 gcaaagtggca 71
>gb|AC148970.3| Medicago truncatula chromosome 2 BAC clone mth2-74j13, complete sequence Length = 83100 Score = 77.8 bits (39), Expect = 4e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 414 agctagtgggccatttcttggaggagacatgtgtgaacccaacatttattatcaaccacc 473 |||| ||||| || || |||||||| |||||||| || || ||||| || || ||||||| Sbjct: 64157 agcttgtggggcactttttggaggaaacatgtgtcaatcctacattcatcataaaccacc 64216 Query: 474 cagagataatgagtccattggcaaagtggca 504 |||||||||||||||| ||||| |||||||| Sbjct: 64217 cagagataatgagtcctttggcgaagtggca 64247 Score = 52.0 bits (26), Expect = 0.002 Identities = 93/114 (81%), Gaps = 1/114 (0%) Strand = Plus / Plus Query: 1 ttggttgttggtggattggaccgtgtctatgaaattgggaagcagttcaggnaatgaagg 60 |||||||||||||| || ||||||| ||||||||||| || || || ||| ||||| || Sbjct: 62561 ttggttgttggtggtctgaaccgtgtttatgaaattggtaaacaatttagg-aatgaggg 62619 Query: 61 gattgatttaacacacaatcctgaattcacaacagttgagttttatatggctta 114 || ||||| || || ||||||||||| || || |||||| ||||||||||| Sbjct: 62620 catagatttgactcataatcctgaatttactacctgtgagttctatatggctta 62673
>emb|X94451.1|LELYSRSGN L.esculentum mRNA for lysyl-tRNA synthetase (LysRS) Length = 2075 Score = 77.8 bits (39), Expect = 4e-11 Identities = 112/135 (82%), Gaps = 1/135 (0%) Strand = Plus / Plus Query: 4 gttgttggtggattggaccgtgtctatgaaattgggaagcagttcaggnaatgaagggat 63 |||||||||||||| |||||||| ||||| | |||||||| |||||| |||||||| || Sbjct: 1053 gttgttggtggattcgaccgtgtttatgagctggggaagcatttcagg-aatgaaggaat 1111 Query: 64 tgatttaacacacaatcctgaattcacaacagttgagttttatatggcttatgcagatta 123 |||||||| ||| |||||| ||||||| ||| ||||||||||||| || ||||| Sbjct: 1112 ggatttaactcactctcctgagttcacaatgtgtgaactttatatggcttacgctgatta 1171 Query: 124 caatgacttgatgga 138 ||| || |||||||| Sbjct: 1172 caacgatttgatgga 1186
>ref|XM_623933.1| PREDICTED: Apis mellifera similar to CG12141-PA, isoform A (LOC551538), mRNA Length = 1905 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 69 taacacacaatcctgaattcacaacagttgagttttatatggcttatgcagattacaatg 128 ||||||| ||||| ||||||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 1019 taacacataatccagaattcacaacttgtgaattttatatggcttatgcagattataatg 1078 Query: 129 actt 132 |||| Sbjct: 1079 actt 1082
>ref|XM_663114.1| Cryptosporidium hominis TU502 Kars protein (Chro.40267) partial mRNA Length = 1599 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 53 aatgaagggattgatttaacacacaatcctgaattcacaacagttgagttttatatggct 112 |||||||| || |||||||||||||| ||||| |||||| || | |||||||| |||||| Sbjct: 805 aatgaaggaatagatttaacacacaaccctgagttcacagcaatggagttttacatggct 864 Query: 113 tatgcagatta 123 ||||| ||||| Sbjct: 865 tatgctgatta 875
>gb|BC046578.1| Xenopus laevis lysyl-tRNA synthetase, mRNA (cDNA clone MGC:53345 IMAGE:5571004), complete cds Length = 2036 Score = 63.9 bits (32), Expect = 6e-07 Identities = 101/123 (82%), Gaps = 1/123 (0%) Strand = Plus / Plus Query: 7 gttggtggattggaccgtgtctatgaaattgggaagcagttcaggnaatgaagggattga 66 ||||||||| | ||| | ||||||||||| |||| |||||| | |||||||| || || Sbjct: 1053 gttggtggaattgacagggtctatgaaatagggagacagttccg-aaatgaaggaataga 1111 Query: 67 tttaacacacaatcctgaattcacaacagttgagttttatatggcttatgcagattacaa 126 | | || |||||||| || ||||||||| ||| ||||| |||||||||||||| ||||| Sbjct: 1112 tctgacccacaatccggagttcacaacatgtgaattttacatggcttatgcagactacaa 1171 Query: 127 tga 129 ||| Sbjct: 1172 tga 1174
>ref|NM_112003.2| Arabidopsis thaliana ATP binding / aspartate-tRNA ligase/ lysine-tRNA ligase/ nucleic acid binding / tRNA ligase AT3G11710 mRNA, complete cds Length = 2155 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 335 aacaagtatctgatagatgcatgtgctaagtatgatgttaaatgtccacctccccagaca 394 |||||||||||||| ||||||||||| | || |||||| ||||| || ||||| |||||| Sbjct: 1448 aacaagtatctgattgatgcatgtgcgaggtttgatgtcaaatgccctcctcctcagaca 1507 Query: 395 aca 397 ||| Sbjct: 1508 aca 1510 Score = 60.0 bits (30), Expect = 9e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 439 gacatgtgtgaacccaacatttattatcaaccacccagagataatgagtccattggcaaa 498 |||||||||||||||||| || || |||||||| || ||||| |||||||| ||||| || Sbjct: 1552 gacatgtgtgaacccaactttcatcatcaaccagcccgagatcatgagtcctttggctaa 1611 Query: 499 gtggca 504 ||||| Sbjct: 1612 atggca 1617
>gb|AC009918.5|ATAC009918 Arabidopsis thaliana chromosome III BAC T19F11 genomic sequence, complete sequence Length = 45173 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 335 aacaagtatctgatagatgcatgtgctaagtatgatgttaaatgtccacctccccagaca 394 |||||||||||||| ||||||||||| | || |||||| ||||| || ||||| |||||| Sbjct: 39923 aacaagtatctgattgatgcatgtgcgaggtttgatgtcaaatgccctcctcctcagaca 39864 Query: 395 aca 397 ||| Sbjct: 39863 aca 39861 Score = 60.0 bits (30), Expect = 9e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 439 gacatgtgtgaacccaacatttattatcaaccacccagagataatgagtccattggcaaa 498 |||||||||||||||||| || || |||||||| || ||||| |||||||| ||||| || Sbjct: 39728 gacatgtgtgaacccaactttcatcatcaaccagcccgagatcatgagtcctttggctaa 39669 Query: 499 gtggca 504 ||||| Sbjct: 39668 atggca 39663
>gb|AC016795.6|ATAC016795 Arabidopsis thaliana chromosome III BAC F26K24 genomic sequence, complete sequence Length = 100835 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 335 aacaagtatctgatagatgcatgtgctaagtatgatgttaaatgtccacctccccagaca 394 |||||||||||||| ||||||||||| | || |||||| ||||| || ||||| |||||| Sbjct: 3755 aacaagtatctgattgatgcatgtgcgaggtttgatgtcaaatgccctcctcctcagaca 3696 Query: 395 aca 397 ||| Sbjct: 3695 aca 3693 Score = 60.0 bits (30), Expect = 9e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 439 gacatgtgtgaacccaacatttattatcaaccacccagagataatgagtccattggcaaa 498 |||||||||||||||||| || || |||||||| || ||||| |||||||| ||||| || Sbjct: 3560 gacatgtgtgaacccaactttcatcatcaaccagcccgagatcatgagtcctttggctaa 3501 Query: 499 gtggca 504 ||||| Sbjct: 3500 atggca 3495
>gb|AY099551.1| Arabidopsis thaliana lysyl-tRNA synthetase (At3g11710) mRNA, complete cds Length = 2083 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 335 aacaagtatctgatagatgcatgtgctaagtatgatgttaaatgtccacctccccagaca 394 |||||||||||||| ||||||||||| | || |||||| ||||| || ||||| |||||| Sbjct: 1424 aacaagtatctgattgatgcatgtgcgaggtttgatgtcaaatgccctcctcctcagaca 1483 Query: 395 aca 397 ||| Sbjct: 1484 aca 1486 Score = 60.0 bits (30), Expect = 9e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 439 gacatgtgtgaacccaacatttattatcaaccacccagagataatgagtccattggcaaa 498 |||||||||||||||||| || || |||||||| || ||||| |||||||| ||||| || Sbjct: 1528 gacatgtgtgaacccaactttcatcatcaaccagcccgagatcatgagtcctttggctaa 1587 Query: 499 gtggca 504 ||||| Sbjct: 1588 atggca 1593
>ref|XM_625825.1| Cryptosporidium parvum Iowa II lysyl-tRNA synthetase (NOB+tRNA synthetase) (cgd4_2370), partial mRNA Length = 1680 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 53 aatgaagggattgatttaacacacaatcctgaattcacaacagttgagttttatatggct 112 |||||||| || |||||||||||||| ||||| |||||| || | |||||||| ||||| Sbjct: 886 aatgaaggaatagatttaacacacaaccctgagttcacagcaatggagttttacatggca 945 Query: 113 tatgcagatta 123 ||||| ||||| Sbjct: 946 tatgctgatta 956
>gb|BT002123.1| Arabidopsis thaliana lysyl-tRNA synthetase (At3g11710) mRNA, complete cds Length = 1938 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 335 aacaagtatctgatagatgcatgtgctaagtatgatgttaaatgtccacctccccagaca 394 |||||||||||||| ||||||||||| | || |||||| ||||| || ||||| |||||| Sbjct: 1360 aacaagtatctgattgatgcatgtgcgaggtttgatgtcaaatgccctcctcctcagaca 1419 Query: 395 aca 397 ||| Sbjct: 1420 aca 1422 Score = 60.0 bits (30), Expect = 9e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 439 gacatgtgtgaacccaacatttattatcaaccacccagagataatgagtccattggcaaa 498 |||||||||||||||||| || || |||||||| || ||||| |||||||| ||||| || Sbjct: 1464 gacatgtgtgaacccaactttcatcatcaaccagcccgagatcatgagtcctttggctaa 1523 Query: 499 gtggca 504 ||||| Sbjct: 1524 atggca 1529
>gb|AF125574.1|AF125574 Arabidopsis thaliana lysyl-tRNA synthetase mRNA, complete cds Length = 2193 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 335 aacaagtatctgatagatgcatgtgctaagtatgatgttaaatgtccacctccccagaca 394 |||||||||||||| ||||||||||| | || |||||| ||||| || ||||| |||||| Sbjct: 1446 aacaagtatctgattgatgcatgtgcgaggtttgatgtcaaatgccctcctcctcagaca 1505 Query: 395 aca 397 ||| Sbjct: 1506 aca 1508 Score = 60.0 bits (30), Expect = 9e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 439 gacatgtgtgaacccaacatttattatcaaccacccagagataatgagtccattggcaaa 498 |||||||||||||||||| || || |||||||| || ||||| |||||||| ||||| || Sbjct: 1550 gacatgtgtgaacccaactttcatcatcaaccagcccgagatcatgagtcctttggctaa 1609 Query: 499 gtggca 504 ||||| Sbjct: 1610 atggca 1615
>gb|BC076028.1| Danio rerio lysyl-tRNA synthetase, mRNA (cDNA clone MGC:92483 IMAGE:7045855), complete cds Length = 2247 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 565 tgcaatgcctacacagagttgaacgatcc 593 ||||||||||||||||||||||||||||| Sbjct: 1579 tgcaatgcctacacagagttgaacgatcc 1607
>gb|AY648786.1| Danio rerio lysyl-tRNA synthetase mRNA, complete cds Length = 2102 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 565 tgcaatgcctacacagagttgaacgatcc 593 ||||||||||||||||||||||||||||| Sbjct: 1531 tgcaatgcctacacagagttgaacgatcc 1559
>ref|XM_645508.1| Entamoeba histolytica HM-1:IMSS lysyl-tRNA synthetase (209.t00002) partial mRNA Length = 2202 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 53 aatgaagggattgatttaacacacaatcctgaattcacaacagttgagttttatatggct 112 |||||||| |||||| |||||| ||||| ||||| || ||| ||| ||||||||||| Sbjct: 751 aatgaaggtattgatcaaacacataatccagaatttactacatgtgaattttatatggca 810 Query: 113 tatgcagattacaatga 129 ||||||||||| ||||| Sbjct: 811 tatgcagattataatga 827
>ref|NM_001002386.1| Danio rerio lysyl-tRNA synthetase (kars), mRNA Length = 2247 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 565 tgcaatgcctacacagagttgaacgatcc 593 ||||||||||||||||||||||||||||| Sbjct: 1579 tgcaatgcctacacagagttgaacgatcc 1607
>ref|XM_632596.1| Dictyostelium discoideum leucyl-tRNA synthetase (DDB0231264), partial mRNA Length = 1848 Score = 54.0 bits (27), Expect = 6e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 53 aatgaagggattgatttaacacacaatcctgaattcacaacagttgagttttatatggct 112 |||||||| |||||||||||||| ||||| ||||| |||||| ||| |||||| || Sbjct: 1042 aatgaaggcattgatttaacacataatccagaatttacaacatgtgaattttatcaagca 1101 Query: 113 tatgcagatta 123 ||||||||||| Sbjct: 1102 tatgcagatta 1112
>gb|BC083652.1| Rattus norvegicus lysyl-tRNA synthetase, mRNA (cDNA clone MGC:94484 IMAGE:7135143), complete cds Length = 2168 Score = 54.0 bits (27), Expect = 6e-04 Identities = 97/119 (81%), Gaps = 1/119 (0%) Strand = Plus / Plus Query: 2 tggttgttggtggattggaccgtgtctatgaaattgggaagcagttcaggnaatgaaggg 61 |||| |||||||| | ||||| || |||||||||||| |||||| || || |||||| Sbjct: 1098 tggtggttggtggcattgaccgggtttatgaaattgggcgccagttccgg-aacgaaggg 1156 Query: 62 attgatttaacacacaatcctgaattcacaacagttgagttttatatggcttatgcaga 120 |||||||| || ||||||||||| ||||| || |||||| || ||||| |||||||| Sbjct: 1157 attgatttgactcacaatcctgagttcaccacctgtgagttctacatggcctatgcaga 1215
>gb|AF328900.1|F328894S07 Mus musculus lysyl-tRNA synthetase (Kars) gene, exons 8, 9, and 10 Length = 733 Score = 54.0 bits (27), Expect = 6e-04 Identities = 97/119 (81%), Gaps = 1/119 (0%) Strand = Plus / Plus Query: 2 tggttgttggtggattggaccgtgtctatgaaattgggaagcagttcaggnaatgaaggg 61 |||| |||||||| | ||||| || |||||||||||| |||||| || || |||||| Sbjct: 35 tggtggttggtggcattgaccgggtttatgaaattgggcgccagttccgg-aacgaaggg 93 Query: 62 attgatttaacacacaatcctgaattcacaacagttgagttttatatggcttatgcaga 120 |||||||| || ||||||||||| ||||| || |||||| || ||||| |||||||| Sbjct: 94 attgatttgactcacaatcctgagttcaccacctgtgagttctacatggcctatgcaga 152
>ref|NM_001006967.1| Rattus norvegicus lysyl-tRNA synthetase (Kars), mRNA Length = 2168 Score = 54.0 bits (27), Expect = 6e-04 Identities = 97/119 (81%), Gaps = 1/119 (0%) Strand = Plus / Plus Query: 2 tggttgttggtggattggaccgtgtctatgaaattgggaagcagttcaggnaatgaaggg 61 |||| |||||||| | ||||| || |||||||||||| |||||| || || |||||| Sbjct: 1098 tggtggttggtggcattgaccgggtttatgaaattgggcgccagttccgg-aacgaaggg 1156 Query: 62 attgatttaacacacaatcctgaattcacaacagttgagttttatatggcttatgcaga 120 |||||||| || ||||||||||| ||||| || |||||| || ||||| |||||||| Sbjct: 1157 attgatttgactcacaatcctgagttcaccacctgtgagttctacatggcctatgcaga 1215
>ref|NM_053092.1| Mus musculus lysyl-tRNA synthetase (Kars), mRNA Length = 1953 Score = 54.0 bits (27), Expect = 6e-04 Identities = 97/119 (81%), Gaps = 1/119 (0%) Strand = Plus / Plus Query: 2 tggttgttggtggattggaccgtgtctatgaaattgggaagcagttcaggnaatgaaggg 61 |||| |||||||| | ||||| || |||||||||||| |||||| || || |||||| Sbjct: 914 tggtggttggtggcattgaccgggtttatgaaattgggcgccagttccgg-aacgaaggg 972 Query: 62 attgatttaacacacaatcctgaattcacaacagttgagttttatatggcttatgcaga 120 |||||||| || ||||||||||| ||||| || |||||| || ||||| |||||||| Sbjct: 973 attgatttgactcacaatcctgagttcaccacctgtgagttctacatggcctatgcaga 1031
>gb|BC035324.1| Mus musculus lysyl-tRNA synthetase, mRNA (cDNA clone MGC:6923 IMAGE:2811286), complete cds Length = 2146 Score = 54.0 bits (27), Expect = 6e-04 Identities = 97/119 (81%), Gaps = 1/119 (0%) Strand = Plus / Plus Query: 2 tggttgttggtggattggaccgtgtctatgaaattgggaagcagttcaggnaatgaaggg 61 |||| |||||||| | ||||| || |||||||||||| |||||| || || |||||| Sbjct: 1092 tggtggttggtggcattgaccgggtttatgaaattgggcgccagttccgg-aacgaaggg 1150 Query: 62 attgatttaacacacaatcctgaattcacaacagttgagttttatatggcttatgcaga 120 |||||||| || ||||||||||| ||||| || |||||| || ||||| |||||||| Sbjct: 1151 attgatttgactcacaatcctgagttcaccacctgtgagttctacatggcctatgcaga 1209
>gb|BC027356.1| Mus musculus lysyl-tRNA synthetase, mRNA (cDNA clone MGC:37041 IMAGE:4950333), complete cds Length = 2205 Score = 54.0 bits (27), Expect = 6e-04 Identities = 97/119 (81%), Gaps = 1/119 (0%) Strand = Plus / Plus Query: 2 tggttgttggtggattggaccgtgtctatgaaattgggaagcagttcaggnaatgaaggg 61 |||| |||||||| | ||||| || |||||||||||| |||||| || || |||||| Sbjct: 1150 tggtggttggtggcattgaccgggtttatgaaattgggcgccagttccgg-aacgaaggg 1208 Query: 62 attgatttaacacacaatcctgaattcacaacagttgagttttatatggcttatgcaga 120 |||||||| || ||||||||||| ||||| || |||||| || ||||| |||||||| Sbjct: 1209 attgatttgactcacaatcctgagttcaccacctgtgagttctacatggcctatgcaga 1267
>gb|AC114648.25| Mus musculus chromosome 8, clone RP24-144H17, complete sequence Length = 171191 Score = 54.0 bits (27), Expect = 6e-04 Identities = 97/119 (81%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 2 tggttgttggtggattggaccgtgtctatgaaattgggaagcagttcaggnaatgaaggg 61 |||| |||||||| | ||||| || |||||||||||| |||||| || || |||||| Sbjct: 53060 tggtggttggtggcattgaccgggtttatgaaattgggcgccagttccgg-aacgaaggg 53002 Query: 62 attgatttaacacacaatcctgaattcacaacagttgagttttatatggcttatgcaga 120 |||||||| || ||||||||||| ||||| || |||||| || ||||| |||||||| Sbjct: 53001 attgatttgactcacaatcctgagttcaccacctgtgagttctacatggcctatgcaga 52943
>dbj|AK167693.1| Mus musculus 12 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530028M07 product:lysyl-tRNA synthetase, full insert sequence Length = 1963 Score = 54.0 bits (27), Expect = 6e-04 Identities = 97/119 (81%), Gaps = 1/119 (0%) Strand = Plus / Plus Query: 2 tggttgttggtggattggaccgtgtctatgaaattgggaagcagttcaggnaatgaaggg 61 |||| |||||||| | ||||| || |||||||||||| |||||| || || |||||| Sbjct: 925 tggtggttggtggcattgaccgggtttatgaaattgggcgccagttccgg-aacgaaggg 983 Query: 62 attgatttaacacacaatcctgaattcacaacagttgagttttatatggcttatgcaga 120 |||||||| || ||||||||||| ||||| || |||||| || ||||| |||||||| Sbjct: 984 attgatttgactcacaatcctgagttcaccacctgtgagttctacatggcctatgcaga 1042
>dbj|AK153236.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830129A03 product:lysyl-tRNA synthetase, full insert sequence Length = 1961 Score = 54.0 bits (27), Expect = 6e-04 Identities = 97/119 (81%), Gaps = 1/119 (0%) Strand = Plus / Plus Query: 2 tggttgttggtggattggaccgtgtctatgaaattgggaagcagttcaggnaatgaaggg 61 |||| |||||||| | ||||| || |||||||||||| |||||| || || |||||| Sbjct: 923 tggtggttggtggcattgaccgggtttatgaaattgggcgccagttccgg-aacgaaggg 981 Query: 62 attgatttaacacacaatcctgaattcacaacagttgagttttatatggcttatgcaga 120 |||||||| || ||||||||||| ||||| || |||||| || ||||| |||||||| Sbjct: 982 attgatttgactcacaatcctgagttcaccacctgtgagttctacatggcctatgcaga 1040
>dbj|AK089053.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430037N04 product:lysyl-tRNA synthetase, full insert sequence Length = 1963 Score = 54.0 bits (27), Expect = 6e-04 Identities = 97/119 (81%), Gaps = 1/119 (0%) Strand = Plus / Plus Query: 2 tggttgttggtggattggaccgtgtctatgaaattgggaagcagttcaggnaatgaaggg 61 |||| |||||||| | ||||| || |||||||||||| |||||| || || |||||| Sbjct: 925 tggtggttggtggcattgaccgggtttatgaaattgggcgccagttccgg-aacgaaggg 983 Query: 62 attgatttaacacacaatcctgaattcacaacagttgagttttatatggcttatgcaga 120 |||||||| || ||||||||||| ||||| || |||||| || ||||| |||||||| Sbjct: 984 attgatttgactcacaatcctgagttcaccacctgtgagttctacatggcctatgcaga 1042
>dbj|AK090203.1| Mus musculus 16 days neonate male medulla oblongata cDNA, RIKEN full-length enriched library, clone:G630016I22 product:lysyl-tRNA synthetase, full insert sequence Length = 1963 Score = 54.0 bits (27), Expect = 6e-04 Identities = 97/119 (81%), Gaps = 1/119 (0%) Strand = Plus / Plus Query: 2 tggttgttggtggattggaccgtgtctatgaaattgggaagcagttcaggnaatgaaggg 61 |||| |||||||| | ||||| || |||||||||||| |||||| || || |||||| Sbjct: 925 tggtggttggtggcattgaccgggtttatgaaattgggcgccagttccgg-aacgaaggg 983 Query: 62 attgatttaacacacaatcctgaattcacaacagttgagttttatatggcttatgcaga 120 |||||||| || ||||||||||| ||||| || |||||| || ||||| |||||||| Sbjct: 984 attgatttgactcacaatcctgagttcaccacctgtgagttctacatggcctatgcaga 1042
>gb|BC036289.1| Mus musculus lysyl-tRNA synthetase, mRNA (cDNA clone MGC:7105 IMAGE:3157706), complete cds Length = 2023 Score = 54.0 bits (27), Expect = 6e-04 Identities = 97/119 (81%), Gaps = 1/119 (0%) Strand = Plus / Plus Query: 2 tggttgttggtggattggaccgtgtctatgaaattgggaagcagttcaggnaatgaaggg 61 |||| |||||||| | ||||| || |||||||||||| |||||| || || |||||| Sbjct: 969 tggtggttggtggcattgaccgggtttatgaaattgggcgccagttccgg-aacgaaggg 1027 Query: 62 attgatttaacacacaatcctgaattcacaacagttgagttttatatggcttatgcaga 120 |||||||| || ||||||||||| ||||| || |||||| || ||||| |||||||| Sbjct: 1028 attgatttgactcacaatcctgagttcaccacctgtgagttctacatggcctatgcaga 1086
>gb|AC159873.11| Medicago truncatula clone mth2-46p15, complete sequence Length = 129948 Score = 52.0 bits (26), Expect = 0.002 Identities = 92/113 (81%), Gaps = 1/113 (0%) Strand = Plus / Plus Query: 2 tggttgttggtggattggaccgtgtctatgaaattgggaagcagttcaggnaatgaaggg 61 ||||||||||||| |||| ||||| ||||||||||| || || || || ||||| || Sbjct: 114057 tggttgttggtgggctggaacgtgtttatgaaattggtaaacaatttag-aaatgagggt 114115 Query: 62 attgatttaacacacaatcctgaattcacaacagttgagttttatatggctta 114 || || | |||||||||||||| ||||| || |||||||||||||||||| Sbjct: 114116 atagacatgacacacaatcctgagttcactgcatgtgagttttatatggctta 114168 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 188 tataagatcaaatatcatgccaatggagttgataa 222 ||||| |||||||||||||| ||||| |||||||| Sbjct: 114337 tataaaatcaaatatcatgcaaatggggttgataa 114371 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 74 cacaatcctgaattcacaacagttgagttttatatggcttatgcagattacaatgacttg 133 ||||||||||| |||||||| |||||| |||||| ||| ||| |||||| ||||| || Sbjct: 96286 cacaatcctgagttcacaacttgtgagttctatatgccttttgcggattactatgacctg 96345 Query: 134 atg 136 ||| Sbjct: 96346 atg 96348 Score = 44.1 bits (22), Expect = 0.55 Identities = 61/74 (82%) Strand = Plus / Plus Query: 431 ttggaggagacatgtgtgaacccaacatttattatcaaccacccagagataatgagtcca 490 ||||| || |||||||| || || ||||| || || || || || ||||| |||||||| Sbjct: 114934 ttggaagaaacatgtgtcaatcctacattcatcataaatcatcccgagatcatgagtcct 114993 Query: 491 ttggcaaagtggca 504 |||||||||||||| Sbjct: 114994 ttggcaaagtggca 115007 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 2 tggttgttggtggattggaccgtgtctatgaaattgg 38 ||||||||||||| |||| ||||| ||||||||||| Sbjct: 108635 tggttgttggtgggatggaacgtgtttatgaaattgg 108671 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 476 gagataatgagtccattggcaaagtggca 504 ||||| |||||||| |||||||||||||| Sbjct: 105653 gagatcatgagtcctttggcaaagtggca 105681
>gb|AC125477.13| Medicago truncatula clone mth2-12j8, complete sequence Length = 127843 Score = 52.0 bits (26), Expect = 0.002 Identities = 92/113 (81%), Gaps = 1/113 (0%) Strand = Plus / Plus Query: 2 tggttgttggtggattggaccgtgtctatgaaattgggaagcagttcaggnaatgaaggg 61 ||||||||||||| |||| ||||| ||||||||||| || || || || ||||| || Sbjct: 7169 tggttgttggtgggctggaacgtgtttatgaaattggtaaacaatttag-aaatgagggt 7227 Query: 62 attgatttaacacacaatcctgaattcacaacagttgagttttatatggctta 114 || || | |||||||||||||| ||||| || |||||||||||||||||| Sbjct: 7228 atagacatgacacacaatcctgagttcactgcatgtgagttttatatggctta 7280 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 188 tataagatcaaatatcatgccaatggagttgataa 222 ||||| |||||||||||||| ||||| |||||||| Sbjct: 7449 tataaaatcaaatatcatgcaaatggggttgataa 7483 Score = 44.1 bits (22), Expect = 0.55 Identities = 61/74 (82%) Strand = Plus / Plus Query: 431 ttggaggagacatgtgtgaacccaacatttattatcaaccacccagagataatgagtcca 490 ||||| || |||||||| || || ||||| || || || || || ||||| |||||||| Sbjct: 8046 ttggaagaaacatgtgtcaatcctacattcatcataaatcatcccgagatcatgagtcct 8105 Query: 491 ttggcaaagtggca 504 |||||||||||||| Sbjct: 8106 ttggcaaagtggca 8119 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 2 tggttgttggtggattggaccgtgtctatgaaattgg 38 ||||||||||||| |||| ||||| ||||||||||| Sbjct: 1747 tggttgttggtgggatggaacgtgtttatgaaattgg 1783
>gb|AC125475.11| Medicago truncatula clone mth2-5j2, complete sequence Length = 165679 Score = 52.0 bits (26), Expect = 0.002 Identities = 92/113 (81%), Gaps = 1/113 (0%) Strand = Plus / Minus Query: 2 tggttgttggtggattggaccgtgtctatgaaattgggaagcagttcaggnaatgaaggg 61 ||||||||||||| |||| ||||| ||||||||||| || || || || ||||| || Sbjct: 80785 tggttgttggtgggctggaacgtgtttatgaaattggtaaacaatttag-aaatgagggt 80727 Query: 62 attgatttaacacacaatcctgaattcacaacagttgagttttatatggctta 114 || || | |||||||||||||| ||||| || |||||||||||||||||| Sbjct: 80726 atagacatgacacacaatcctgagttcactgcatgtgagttttatatggctta 80674 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Minus Query: 74 cacaatcctgaattcacaacagttgagttttatatggcttatgcagattacaatgacttg 133 ||||||||||| |||||||| |||||| |||||| ||| ||| |||||| ||||| || Sbjct: 98557 cacaatcctgagttcacaacttgtgagttctatatgccttttgcggattactatgacctg 98498 Query: 134 atg 136 ||| Sbjct: 98497 atg 98495 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 188 tataagatcaaatatcatgccaatggagttgataa 222 ||||| |||||||||||||| ||||| |||||||| Sbjct: 80505 tataaaatcaaatatcatgcaaatggggttgataa 80471 Score = 44.1 bits (22), Expect = 0.55 Identities = 61/74 (82%) Strand = Plus / Minus Query: 431 ttggaggagacatgtgtgaacccaacatttattatcaaccacccagagataatgagtcca 490 ||||| || |||||||| || || ||||| || || || || || ||||| |||||||| Sbjct: 79908 ttggaagaaacatgtgtcaatcctacattcatcataaatcatcccgagatcatgagtcct 79849 Query: 491 ttggcaaagtggca 504 |||||||||||||| Sbjct: 79848 ttggcaaagtggca 79835 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 476 gagataatgagtccattggcaaagtggca 504 ||||| |||||||| |||||||||||||| Sbjct: 89189 gagatcatgagtcctttggcaaagtggca 89161 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 2 tggttgttggtggattggaccgtgtctatgaaattgg 38 ||||||||||||| |||| ||||| ||||||||||| Sbjct: 86207 tggttgttggtgggatggaacgtgtttatgaaattgg 86171
>ref|NM_001030583.1| Gallus gallus Lysyl-tRNA synthetase (KARS), mRNA Length = 2192 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 53 aatgaagggattgatttaacacacaatcctgaattcacaacagttgagttttatatggct 112 |||||||| |||||||| || ||||| ||||| |||||||| ||| || || |||||| Sbjct: 1324 aatgaaggaattgatttgactcacaaccctgagttcacaacttgtgaattctacatggct 1383 Query: 113 tatgcagattacaatgacttgatgga 138 |||||||| ||| ||| |||||||| Sbjct: 1384 tatgcagactaccgtgatttgatgga 1409
>emb|AJ720036.1| Gallus gallus mRNA for hypothetical protein, clone 9m1 Length = 2192 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 53 aatgaagggattgatttaacacacaatcctgaattcacaacagttgagttttatatggct 112 |||||||| |||||||| || ||||| ||||| |||||||| ||| || || |||||| Sbjct: 1324 aatgaaggaattgatttgactcacaaccctgagttcacaacttgtgaattctacatggct 1383 Query: 113 tatgcagattacaatgacttgatgga 138 |||||||| ||| ||| |||||||| Sbjct: 1384 tatgcagactaccgtgatttgatgga 1409
>dbj|AP000411.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone: K11J14 Length = 90627 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 98 gagttttatatggcttatgcagattacaatgacttgatggag 139 ||||| |||| |||||| ||||| |||||||||||||||||| Sbjct: 24247 gagttctataaggcttacgcagactacaatgacttgatggag 24206 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 161 ggtatggttaaggagctgacaggtgggtataagatcaaata 201 |||||||| ||| | || |||||||| |||||||||||||| Sbjct: 21772 ggtatggtgaagaaactaacaggtggatataagatcaaata 21732
>ref|XM_511115.1| PREDICTED: Pan troglodytes similar to lysyl-tRNA synthetase (LOC454252), mRNA Length = 1878 Score = 48.1 bits (24), Expect = 0.035 Identities = 57/68 (83%) Strand = Plus / Plus Query: 53 aatgaagggattgatttaacacacaatcctgaattcacaacagttgagttttatatggct 112 ||||| ||||||||||| || ||||||||||| ||||| || |||||| || ||||| Sbjct: 1054 aatgaggggattgatttgacgcacaatcctgagttcaccacctgtgagttctacatggcc 1113 Query: 113 tatgcaga 120 |||||||| Sbjct: 1114 tatgcaga 1121
>ref|NM_005548.1| Homo sapiens lysyl-tRNA synthetase (KARS), mRNA Length = 1997 Score = 48.1 bits (24), Expect = 0.035 Identities = 57/68 (83%) Strand = Plus / Plus Query: 53 aatgaagggattgatttaacacacaatcctgaattcacaacagttgagttttatatggct 112 ||||| ||||||||||| || ||||||||||| ||||| || |||||| || ||||| Sbjct: 1010 aatgaggggattgatttgacgcacaatcctgagttcaccacctgtgagttctacatggcc 1069 Query: 113 tatgcaga 120 |||||||| Sbjct: 1070 tatgcaga 1077
>gb|BC004132.2| Homo sapiens lysyl-tRNA synthetase, mRNA (cDNA clone MGC:1404 IMAGE:2963032), complete cds Length = 1988 Score = 48.1 bits (24), Expect = 0.035 Identities = 57/68 (83%) Strand = Plus / Plus Query: 53 aatgaagggattgatttaacacacaatcctgaattcacaacagttgagttttatatggct 112 ||||| ||||||||||| || ||||||||||| ||||| || |||||| || ||||| Sbjct: 981 aatgaggggattgatttgacgcacaatcctgagttcaccacctgtgagttctacatggcc 1040 Query: 113 tatgcaga 120 |||||||| Sbjct: 1041 tatgcaga 1048
>gb|BC013246.1| Homo sapiens lysyl-tRNA synthetase, mRNA (cDNA clone IMAGE:4339500) Length = 1960 Score = 48.1 bits (24), Expect = 0.035 Identities = 57/68 (83%) Strand = Plus / Plus Query: 53 aatgaagggattgatttaacacacaatcctgaattcacaacagttgagttttatatggct 112 ||||| ||||||||||| || ||||||||||| ||||| || |||||| || ||||| Sbjct: 968 aatgaggggattgatttgacgcacaatcctgagttcaccacctgtgagttctacatggcc 1027 Query: 113 tatgcaga 120 |||||||| Sbjct: 1028 tatgcaga 1035
>emb|AL442203.12| Human DNA sequence from clone RP11-12I24 on chromosome 13 Contains the 5' end of a novel gene (contains KIAA0564 and FLJ21779) possible ortholog of RIKEN cDNA 1300010F03 gene, a lysyl-tRNA synthetase (KARS) pseudogene, a ribosomal protein S28 (RPS28) pseudogene and 2 CpG islands, complete sequence Length = 163511 Score = 48.1 bits (24), Expect = 0.035 Identities = 57/68 (83%) Strand = Plus / Plus Query: 53 aatgaagggattgatttaacacacaatcctgaattcacaacagttgagttttatatggct 112 ||||||||||||||||| | ||||||||||| ||||| || ||||| |||||||| Sbjct: 79398 aatgaagggattgatttgaggcacaatcctgagttcaccacctgcgagttctatatggcc 79457 Query: 113 tatgcaga 120 |||||||| Sbjct: 79458 tatgcaga 79465
>emb|CR857191.1| Pongo pygmaeus mRNA; cDNA DKFZp468A0216 (from clone DKFZp468A0216) Length = 2168 Score = 48.1 bits (24), Expect = 0.035 Identities = 57/68 (83%) Strand = Plus / Plus Query: 53 aatgaagggattgatttaacacacaatcctgaattcacaacagttgagttttatatggct 112 ||||| ||||||||||| || ||||||||||| ||||| || |||||| || ||||| Sbjct: 1162 aatgaggggattgatttgacgcacaatcctgagttcaccacctgtgagttctacatggcc 1221 Query: 113 tatgcaga 120 |||||||| Sbjct: 1222 tatgcaga 1229
>dbj|AK126584.1| Homo sapiens cDNA FLJ44621 fis, clone BRACE2016896, highly similar to Lysyl-tRNA synthetase (EC 6.1.1.6) Length = 1463 Score = 48.1 bits (24), Expect = 0.035 Identities = 57/68 (83%) Strand = Plus / Plus Query: 53 aatgaagggattgatttaacacacaatcctgaattcacaacagttgagttttatatggct 112 ||||| ||||||||||| || ||||||||||| ||||| || |||||| || ||||| Sbjct: 606 aatgaggggattgatttgacgcacaatcctgagttcaccacctgtgagttctacatggcc 665 Query: 113 tatgcaga 120 |||||||| Sbjct: 666 tatgcaga 673
>emb|CR622561.1| full-length cDNA clone CS0DA002YH16 of Neuroblastoma of Homo sapiens (human) Length = 1942 Score = 48.1 bits (24), Expect = 0.035 Identities = 57/68 (83%) Strand = Plus / Plus Query: 53 aatgaagggattgatttaacacacaatcctgaattcacaacagttgagttttatatggct 112 ||||| ||||||||||| || ||||||||||| ||||| || |||||| || ||||| Sbjct: 982 aatgaggggattgatttgacgcacaatcctgagttcaccacctgtgagttctacatggcc 1041 Query: 113 tatgcaga 120 |||||||| Sbjct: 1042 tatgcaga 1049
>emb|CR617122.1| full-length cDNA clone CS0DF031YO12 of Fetal brain of Homo sapiens (human) Length = 1942 Score = 48.1 bits (24), Expect = 0.035 Identities = 57/68 (83%) Strand = Plus / Plus Query: 53 aatgaagggattgatttaacacacaatcctgaattcacaacagttgagttttatatggct 112 ||||| ||||||||||| || ||||||||||| ||||| || |||||| || ||||| Sbjct: 993 aatgaggggattgatttgacgcacaatcctgagttcaccacctgtgagttctacatggcc 1052 Query: 113 tatgcaga 120 |||||||| Sbjct: 1053 tatgcaga 1060
>emb|CR611117.1| full-length cDNA clone CS0DF005YA14 of Fetal brain of Homo sapiens (human) Length = 1963 Score = 48.1 bits (24), Expect = 0.035 Identities = 57/68 (83%) Strand = Plus / Plus Query: 53 aatgaagggattgatttaacacacaatcctgaattcacaacagttgagttttatatggct 112 ||||| ||||||||||| || ||||||||||| ||||| || |||||| || ||||| Sbjct: 986 aatgaggggattgatttgacgcacaatcctgagttcaccacctgtgagttctacatggcc 1045 Query: 113 tatgcaga 120 |||||||| Sbjct: 1046 tatgcaga 1053
>emb|CR608423.1| full-length cDNA clone CS0DI057YB20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1932 Score = 48.1 bits (24), Expect = 0.035 Identities = 57/68 (83%) Strand = Plus / Plus Query: 53 aatgaagggattgatttaacacacaatcctgaattcacaacagttgagttttatatggct 112 ||||| ||||||||||| || ||||||||||| ||||| || |||||| || ||||| Sbjct: 976 aatgaggggattgatttgacgcacaatcctgagttcaccacctgtgagttctacatggcc 1035 Query: 113 tatgcaga 120 |||||||| Sbjct: 1036 tatgcaga 1043
>emb|CR601961.1| full-length cDNA clone CS0DG003YC17 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1933 Score = 48.1 bits (24), Expect = 0.035 Identities = 57/68 (83%) Strand = Plus / Plus Query: 53 aatgaagggattgatttaacacacaatcctgaattcacaacagttgagttttatatggct 112 ||||| ||||||||||| || ||||||||||| ||||| || |||||| || ||||| Sbjct: 963 aatgaggggattgatttgacgcacaatcctgagttcaccacctgtgagttctacatggcc 1022 Query: 113 tatgcaga 120 |||||||| Sbjct: 1023 tatgcaga 1030
>emb|CR593300.1| full-length cDNA clone CS0DG004YP20 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1960 Score = 48.1 bits (24), Expect = 0.035 Identities = 57/68 (83%) Strand = Plus / Plus Query: 53 aatgaagggattgatttaacacacaatcctgaattcacaacagttgagttttatatggct 112 ||||| ||||||||||| || ||||||||||| ||||| || |||||| || ||||| Sbjct: 984 aatgaggggattgatttgacgcacaatcctgagttcaccacctgtgagttctacatggcc 1043 Query: 113 tatgcaga 120 |||||||| Sbjct: 1044 tatgcaga 1051
>gb|AC025287.8| Homo sapiens chromosome 16 clone RP11-490B18, complete sequence Length = 194832 Score = 48.1 bits (24), Expect = 0.035 Identities = 57/68 (83%) Strand = Plus / Plus Query: 53 aatgaagggattgatttaacacacaatcctgaattcacaacagttgagttttatatggct 112 ||||| ||||||||||| || ||||||||||| ||||| || |||||| || ||||| Sbjct: 86069 aatgaggggattgatttgacgcacaatcctgagttcaccacctgtgagttctacatggcc 86128 Query: 113 tatgcaga 120 |||||||| Sbjct: 86129 tatgcaga 86136
>gb|AF285758.1|AF285758 Homo sapiens lysyl-tRNA synthetase mRNA, complete cds; nuclear gene for mitochondrial product; alternatively spliced Length = 2000 Score = 48.1 bits (24), Expect = 0.035 Identities = 57/68 (83%) Strand = Plus / Plus Query: 53 aatgaagggattgatttaacacacaatcctgaattcacaacagttgagttttatatggct 112 ||||| ||||||||||| || ||||||||||| ||||| || |||||| || ||||| Sbjct: 1176 aatgaggggattgatttgacgcacaatcctgagttcaccacctgtgagttctacatggcc 1235 Query: 113 tatgcaga 120 |||||||| Sbjct: 1236 tatgcaga 1243
>dbj|D31890.1|HUMORFKG1S Homo sapiens KIAA0070 mRNA, partial cds Length = 1970 Score = 48.1 bits (24), Expect = 0.035 Identities = 57/68 (83%) Strand = Plus / Plus Query: 53 aatgaagggattgatttaacacacaatcctgaattcacaacagttgagttttatatggct 112 ||||| ||||||||||| || ||||||||||| ||||| || |||||| || ||||| Sbjct: 984 aatgaggggattgatttgacgcacaatcctgagttcaccacctgtgagttctacatggcc 1043 Query: 113 tatgcaga 120 |||||||| Sbjct: 1044 tatgcaga 1051
>dbj|D32053.1| Homo sapiens mRNA for Lysyl tRNA Synthetase, complete cds Length = 1997 Score = 48.1 bits (24), Expect = 0.035 Identities = 57/68 (83%) Strand = Plus / Plus Query: 53 aatgaagggattgatttaacacacaatcctgaattcacaacagttgagttttatatggct 112 ||||| ||||||||||| || ||||||||||| ||||| || |||||| || ||||| Sbjct: 1010 aatgaggggattgatttgacgcacaatcctgagttcaccacctgtgagttctacatggcc 1069 Query: 113 tatgcaga 120 |||||||| Sbjct: 1070 tatgcaga 1077
>ref|XM_919013.2| PREDICTED: Mus musculus similar to lysyl-tRNA synthetase, transcript variant 2 (LOC631033), mRNA Length = 1410 Score = 46.1 bits (23), Expect = 0.14 Identities = 96/119 (80%), Gaps = 1/119 (0%) Strand = Plus / Plus Query: 2 tggttgttggtggattggaccgtgtctatgaaattgggaagcagttcaggnaatgaaggg 61 |||| |||||||| | ||||| || |||||||||||| |||||| || || |||||| Sbjct: 327 tggtggttggtggcattgaccgggtttatgaaattgggcgccagttccgg-aacgaaggg 385 Query: 62 attgatttaacacacaatcctgaattcacaacagttgagttttatatggcttatgcaga 120 |||||||| || |||||||| || ||||| || |||||| || ||||| |||||||| Sbjct: 386 attgatttgactcacaatccggagttcaccacctgtgagttctacatggcctatgcaga 444
>ref|XM_904805.2| PREDICTED: Mus musculus similar to lysyl-tRNA synthetase, transcript variant 1 (LOC631033), mRNA Length = 2035 Score = 46.1 bits (23), Expect = 0.14 Identities = 96/119 (80%), Gaps = 1/119 (0%) Strand = Plus / Plus Query: 2 tggttgttggtggattggaccgtgtctatgaaattgggaagcagttcaggnaatgaaggg 61 |||| |||||||| | ||||| || |||||||||||| |||||| || || |||||| Sbjct: 952 tggtggttggtggcattgaccgggtttatgaaattgggcgccagttccgg-aacgaaggg 1010 Query: 62 attgatttaacacacaatcctgaattcacaacagttgagttttatatggcttatgcaga 120 |||||||| || |||||||| || ||||| || |||||| || ||||| |||||||| Sbjct: 1011 attgatttgactcacaatccggagttcaccacctgtgagttctacatggcctatgcaga 1069
>ref|XM_448737.1| Candida glabrata CBS138, CAGL0K12012g partial mRNA Length = 1776 Score = 46.1 bits (23), Expect = 0.14 Identities = 74/90 (82%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 1 ttggttgttggtggattggaccgtgtctatgaaattgggaagcagttcaggnaatgaagg 60 |||||||| ||||| ||||||||||||| |||||||| | || |||| | |||||||| Sbjct: 931 ttggttgtcggtggtatggaccgtgtctacgaaattggtagacaattca-gaaatgaagg 989 Query: 61 gattgatttaacacacaatcctgaattcac 90 || ||| | || ||||| ||||||||||| Sbjct: 990 tatcgatatgactcacaaccctgaattcac 1019
>emb|CR380957.1| Candida glabrata strain CBS138 chromosome K complete sequence Length = 1302002 Score = 46.1 bits (23), Expect = 0.14 Identities = 74/90 (82%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 1 ttggttgttggtggattggaccgtgtctatgaaattgggaagcagttcaggnaatgaagg 60 |||||||| ||||| ||||||||||||| |||||||| | || |||| | |||||||| Sbjct: 1160094 ttggttgtcggtggtatggaccgtgtctacgaaattggtagacaattca-gaaatgaagg 1160152 Query: 61 gattgatttaacacacaatcctgaattcac 90 || ||| | || ||||| ||||||||||| Sbjct: 1160153 tatcgatatgactcacaaccctgaattcac 1160182
>emb|AJ718447.1| Nicotiana tabacum cDNA-AFLP-fragment BSTC1-13-170, cultivar Bright Yellow 2 Length = 123 Score = 46.1 bits (23), Expect = 0.14 Identities = 37/43 (86%) Strand = Plus / Minus Query: 2 tggttgttggtggattggaccgtgtctatgaaattgggaagca 44 ||| ||||||| ||||||| ||||||||||| |||||| ||| Sbjct: 118 tggntgttggtngattggatcgtgtctatgagnttgggangca 76
>ref|XM_635585.1| Dictyostelium discoideum lysine-tRNA ligase (DDB0231263), partial mRNA Length = 1656 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1 ttggttgttggtggattggaccgtgtctatgaaattgg 38 |||||||| ||||| |||| ||||||||||||||||| Sbjct: 784 ttggttgtcggtggtatggatcgtgtctatgaaattgg 821
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence Length = 1178688 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 565 tgcaatgcctacacagagttgaacga 590 |||||||||||||| ||||||||||| Sbjct: 861107 tgcaatgcctacactgagttgaacga 861082
>gb|CP000017.1| Streptococcus pyogenes MGAS5005, complete genome Length = 1838554 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 5 ttgttggtggattggaccgtgtctatgaaattgg 38 |||||||||| |||| ||||||||||||||||| Sbjct: 480737 ttgttggtggtatggaacgtgtctatgaaattgg 480704
>gb|CP000003.1| Streptococcus pyogenes MGAS10394, complete genome Length = 1899877 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 5 ttgttggtggattggaccgtgtctatgaaattgg 38 |||||||||| |||| ||||||||||||||||| Sbjct: 506644 ttgttggtggtatggaacgtgtctatgaaattgg 506611
>gb|AE006515.1| Streptococcus pyogenes M1 GAS, section 44 of 167 of the complete genome Length = 10254 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 5 ttgttggtggattggaccgtgtctatgaaattgg 38 |||||||||| |||| ||||||||||||||||| Sbjct: 1490 ttgttggtggtatggaacgtgtctatgaaattgg 1457
>gb|AC137558.3| Mus musculus BAC clone RP23-16I17 from chromosome 6, complete sequence Length = 225612 Score = 44.1 bits (22), Expect = 0.55 Identities = 55/65 (84%), Gaps = 2/65 (3%) Strand = Plus / Plus Query: 56 gaagggattgatttaacacacaatcctgaattcacaacagttgagttttatatggcttat 115 |||||||||||||| || ||||||||| |||||| || ||||||| || ||||| ||| Sbjct: 111117 gaagggattgatttgactcacaatcct--attcaccacctttgagttctacatggcctat 111174 Query: 116 gcaga 120 ||||| Sbjct: 111175 gcaga 111179
>gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome Length = 1937111 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 5 ttgttggtggattggaccgtgtctatgaaattgg 38 |||||||||| |||| ||||||||||||||||| Sbjct: 495449 ttgttggtggtatggaacgtgtctatgaaattgg 495416
>gb|CP000261.1| Streptococcus pyogenes MGAS2096, complete genome Length = 1860355 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 5 ttgttggtggattggaccgtgtctatgaaattgg 38 |||||||||| |||| ||||||||||||||||| Sbjct: 480695 ttgttggtggtatggaacgtgtctatgaaattgg 480662
>gb|CP000260.1| Streptococcus pyogenes MGAS10270, complete genome Length = 1928252 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 5 ttgttggtggattggaccgtgtctatgaaattgg 38 |||||||||| |||| ||||||||||||||||| Sbjct: 477704 ttgttggtggtatggaacgtgtctatgaaattgg 477671
>gb|CP000259.1| Streptococcus pyogenes MGAS9429, complete genome Length = 1836467 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 5 ttgttggtggattggaccgtgtctatgaaattgg 38 |||||||||| |||| ||||||||||||||||| Sbjct: 478784 ttgttggtggtatggaacgtgtctatgaaattgg 478751
>gb|AE017244.1| Mycoplasma hyopneumoniae 7448, complete genome Length = 920079 Score = 44.1 bits (22), Expect = 0.55 Identities = 55/66 (83%) Strand = Plus / Plus Query: 53 aatgaagggattgatttaacacacaatcctgaattcacaacagttgagttttatatggct 112 |||||||| |||||| ||| || |||||||||||||| || |||| |||||| |||| Sbjct: 237047 aatgaaggttttgattcaactcataatcctgaattcacctcaattgaattttatcaggct 237106 Query: 113 tatgca 118 |||||| Sbjct: 237107 tatgca 237112
>ref|XM_572931.1| Cryptococcus neoformans var. neoformans JEC21 lysine-tRNA ligase (CNI03160) partial mRNA Length = 1967 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 565 tgcaatgcctacacagagttgaacga 590 |||||||||||||| ||||||||||| Sbjct: 1588 tgcaatgcctacactgagttgaacga 1613
>ref|XM_856440.1| PREDICTED: Canis familiaris similar to Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS), transcript variant 8 (LOC479644), mRNA Length = 2188 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Plus Query: 53 aatgaagggattgatttaacacacaatcctgaattcac 90 |||||||| |||||||| || ||||||||||| ||||| Sbjct: 1183 aatgaaggaattgatttgactcacaatcctgagttcac 1220
>ref|XM_856412.1| PREDICTED: Canis familiaris similar to Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS), transcript variant 7 (LOC479644), mRNA Length = 1995 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Plus Query: 53 aatgaagggattgatttaacacacaatcctgaattcac 90 |||||||| |||||||| || ||||||||||| ||||| Sbjct: 990 aatgaaggaattgatttgactcacaatcctgagttcac 1027
>ref|XM_856378.1| PREDICTED: Canis familiaris similar to Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS), transcript variant 6 (LOC479644), mRNA Length = 1771 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Plus Query: 53 aatgaagggattgatttaacacacaatcctgaattcac 90 |||||||| |||||||| || ||||||||||| ||||| Sbjct: 766 aatgaaggaattgatttgactcacaatcctgagttcac 803
>ref|XM_856350.1| PREDICTED: Canis familiaris similar to Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS), transcript variant 5 (LOC479644), mRNA Length = 1721 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Plus Query: 53 aatgaagggattgatttaacacacaatcctgaattcac 90 |||||||| |||||||| || ||||||||||| ||||| Sbjct: 716 aatgaaggaattgatttgactcacaatcctgagttcac 753
>ref|XM_856321.1| PREDICTED: Canis familiaris similar to Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS), transcript variant 4 (LOC479644), mRNA Length = 1889 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Plus Query: 53 aatgaagggattgatttaacacacaatcctgaattcac 90 |||||||| |||||||| || ||||||||||| ||||| Sbjct: 884 aatgaaggaattgatttgactcacaatcctgagttcac 921
>ref|XM_536777.2| PREDICTED: Canis familiaris similar to Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS), transcript variant 1 (LOC479644), mRNA Length = 2009 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Plus Query: 53 aatgaagggattgatttaacacacaatcctgaattcac 90 |||||||| |||||||| || ||||||||||| ||||| Sbjct: 1004 aatgaaggaattgatttgactcacaatcctgagttcac 1041
>ref|XM_845310.1| PREDICTED: Canis familiaris similar to Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS), transcript variant 3 (LOC479644), mRNA Length = 2280 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Plus Query: 53 aatgaagggattgatttaacacacaatcctgaattcac 90 |||||||| |||||||| || ||||||||||| ||||| Sbjct: 1275 aatgaaggaattgatttgactcacaatcctgagttcac 1312
>gb|CP000056.1| Streptococcus pyogenes MGAS6180, complete genome Length = 1897573 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 5 ttgttggtggattggaccgtgtctatgaaattgg 38 |||||||||| |||| ||||||||||||||||| Sbjct: 478322 ttgttggtggtatggaacgtgtctatgaaattgg 478289
>dbj|AP006861.1| Chlamydophila felis Fe/C-56 DNA, complete genome Length = 1166239 Score = 44.1 bits (22), Expect = 0.55 Identities = 56/66 (84%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 22 cgtgtctatgaaattgggaagcagttcaggnaatgaagggattgatttaacacacaatcc 81 ||||||||||||||||| ||| ||| ||| ||||||||||| || ||| |||||||| Sbjct: 207149 cgtgtctatgaaattggtaaggtgtttagg-aatgaagggatagacagaactcacaatcc 207207 Query: 82 tgaatt 87 |||||| Sbjct: 207208 tgaatt 207213
>gb|AE010000.1| Streptococcus pyogenes strain MGAS8232, section 48 of 173 of the complete genome Length = 10184 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 5 ttgttggtggattggaccgtgtctatgaaattgg 38 |||||||||| |||| ||||||||||||||||| Sbjct: 1491 ttgttggtggtatggaacgtgtctatgaaattgg 1458
>gb|BC102322.1| Bos taurus similar to Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS), mRNA (cDNA clone MGC:127504 IMAGE:7950855), complete cds Length = 2262 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Plus Query: 53 aatgaagggattgatttaacacacaatcctgaattcac 90 |||||||| |||||||| || ||||||||||| ||||| Sbjct: 1166 aatgaaggaattgatttgactcacaatcctgagttcac 1203
>gb|AC156449.2| Volvox carteri clone JGIAOBO-37K9, complete sequence Length = 37976 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 370 tgttaaatgtccacctccccag 391 |||||||||||||||||||||| Sbjct: 2436 tgttaaatgtccacctccccag 2457
>gb|AE014074.1| Streptococcus pyogenes MGAS315, complete genome Length = 1900521 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 5 ttgttggtggattggaccgtgtctatgaaattgg 38 |||||||||| |||| ||||||||||||||||| Sbjct: 460847 ttgttggtggtatggaacgtgtctatgaaattgg 460814
>dbj|BA000034.2| Streptococcus pyogenes SSI-1 DNA, complete genome Length = 1894275 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Plus Query: 5 ttgttggtggattggaccgtgtctatgaaattgg 38 |||||||||| |||| ||||||||||||||||| Sbjct: 1435895 ttgttggtggtatggaacgtgtctatgaaattgg 1435928
>ref|NM_001034356.1| Bos taurus similar to Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS) (MGC127504), mRNA Length = 2262 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Plus Query: 53 aatgaagggattgatttaacacacaatcctgaattcac 90 |||||||| |||||||| || ||||||||||| ||||| Sbjct: 1166 aatgaaggaattgatttgactcacaatcctgagttcac 1203
>ref|XM_788370.1| PREDICTED: Strongylocentrotus purpuratus similar to lysyl-tRNA synthetase (LOC588700), mRNA Length = 1800 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 565 tgcaatgcctacacagagttgaacgatcc 593 ||||| ||||||||||||||||| ||||| Sbjct: 1504 tgcaacgcctacacagagttgaatgatcc 1532
>emb|Z31711.1|CLLYTRSY C.longicaudatus mRNA for lysyl tRNA synthetase Length = 1970 Score = 42.1 bits (21), Expect = 2.2 Identities = 54/65 (83%) Strand = Plus / Plus Query: 56 gaagggattgatttaacacacaatcctgaattcacaacagttgagttttatatggcttat 115 ||||| |||||||| || ||||| ||||| ||||| || |||||| || ||||||||| Sbjct: 993 gaaggaattgatttgactcacaaccctgagttcaccacctgtgagttctacatggcttat 1052 Query: 116 gcaga 120 ||||| Sbjct: 1053 gcaga 1057
>gb|BC074097.1| Danio rerio zgc:91984, mRNA (cDNA clone MGC:91984 IMAGE:7042594), complete cds Length = 3542 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tgatttcacacctccctttag 258 ||||||||||||||||||||| Sbjct: 2148 tgatttcacacctccctttag 2128
>ref|NM_001002228.1| Danio rerio zgc:91984 (zgc:91984), mRNA Length = 3542 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tgatttcacacctccctttag 258 ||||||||||||||||||||| Sbjct: 2148 tgatttcacacctccctttag 2128
>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome Length = 5057531 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 98 gagttttatatggcttatgcagattacaatgacttgatgga 138 ||||||||| |||||| || |||||||||||| ||||||| Sbjct: 1564985 gagttttatcaggcttacgcggattacaatgacctgatgga 1565025
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 tctatgaaattgggaagcagt 46 ||||||||||||||||||||| Sbjct: 2491384 tctatgaaattgggaagcagt 2491404
>ref|XM_695922.1| PREDICTED: Danio rerio similar to rhomboid family 1 (LOC572227), mRNA Length = 2279 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tgatttcacacctccctttag 258 ||||||||||||||||||||| Sbjct: 1348 tgatttcacacctccctttag 1328
>ref|XM_689727.1| PREDICTED: Danio rerio similar to rhomboid family 1 (LOC566457), mRNA Length = 3510 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tgatttcacacctccctttag 258 ||||||||||||||||||||| Sbjct: 2140 tgatttcacacctccctttag 2120
>emb|BX248383.5| Mouse DNA sequence from clone RP23-63C4 on chromosome 2, complete sequence Length = 15851 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 131 ttgatggagcttactgaagccatga 155 |||||||||||| |||||||||||| Sbjct: 8344 ttgatggagctttctgaagccatga 8368
>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete genome Length = 3397754 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 109 ggcttatgcagattacaatgacttgatg 136 ||||||||| ||||||||||| |||||| Sbjct: 1985735 ggcttatgccgattacaatgatttgatg 1985708
>gb|DQ192995.1| Homo sapiens 256_18 foamy virus integration site genomic sequence Length = 359 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 cacagagttgaacgatcctt 595 |||||||||||||||||||| Sbjct: 10 cacagagttgaacgatcctt 29
>gb|AC084315.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-353M17, complete sequence Length = 92644 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 actgaagccatgatatctgg 162 |||||||||||||||||||| Sbjct: 84671 actgaagccatgatatctgg 84690
>gb|AC068500.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-175C13, complete sequence Length = 201878 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 actgaagccatgatatctgg 162 |||||||||||||||||||| Sbjct: 1895 actgaagccatgatatctgg 1914
>gb|AE017243.1| Mycoplasma hyopneumoniae J, complete genome Length = 897405 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 gaccgtgtctatgaaattgg 38 |||||||||||||||||||| Sbjct: 229605 gaccgtgtctatgaaattgg 229624
>emb|AJ717298.1| Homo sapiens alpha satelllite DNA Length = 644 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 cacagagttgaacgatcctt 595 |||||||||||||||||||| Sbjct: 379 cacagagttgaacgatcctt 398
>emb|AJ302782.1|HSA302782 Homo sapiens satellite DNA, clone p5aR Length = 364 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 cacagagttgaacgatcctt 595 |||||||||||||||||||| Sbjct: 264 cacagagttgaacgatcctt 245
>emb|BX248407.26| Human DNA sequence from clone RP11-453B6 on chromosome 1, complete sequence Length = 141084 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 cacagagttgaacgatcctt 595 |||||||||||||||||||| Sbjct: 140778 cacagagttgaacgatcctt 140797 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 cacagagttgaacgatcctt 595 |||||||||||||||||||| Sbjct: 139759 cacagagttgaacgatcctt 139778
>emb|BX066750.1|CNS09NO2 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC50AF09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 903 Score = 40.1 bits (20), Expect = 8.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 558 ggaggtgtgcaatgcctacacagagttgaacgatcc 593 |||||||||||| || ||||| ||| |||||||||| Sbjct: 441 ggaggtgtgcaacgcgtacaccgagctgaacgatcc 406
>emb|BX066749.1|CNS09NO1 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC50AF09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 964 Score = 40.1 bits (20), Expect = 8.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 558 ggaggtgtgcaatgcctacacagagttgaacgatcc 593 |||||||||||| || ||||| ||| |||||||||| Sbjct: 469 ggaggtgtgcaacgcgtacaccgagctgaacgatcc 504
>emb|CR628337.1| Legionella pneumophila str. Lens complete genome Length = 3345687 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 109 ggcttatgcagattacaatgacttgatg 136 ||||||||| ||||||||||| |||||| Sbjct: 1946385 ggcttatgccgattacaatgatttgatg 1946358
>emb|CR628336.1| Legionella pneumophila str. Paris complete genome Length = 3503610 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 109 ggcttatgcagattacaatgacttgatg 136 ||||||||| ||||||||||| |||||| Sbjct: 1963744 ggcttatgccgattacaatgatttgatg 1963717
>emb|CR378664.1| Photobacterium profundum SS9; segment 2/12 Length = 347994 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 107 atggcttatgcagattacaatgacttgatgga 138 ||||| || ||||||||||| ||||||||||| Sbjct: 273399 atggcgtacgcagattacaacgacttgatgga 273430
>gb|AC024375.13| Homo sapiens chromosome 15, clone RP11-572A8, complete sequence Length = 163775 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 tcacaacagttgagttttat 106 |||||||||||||||||||| Sbjct: 94888 tcacaacagttgagttttat 94869
>gb|M21871.1|HUMRSCNTK Human alphoid repeat (alpha-RI-DNA), clone alpha-B3 Length = 344 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 cacagagttgaacgatcctt 595 |||||||||||||||||||| Sbjct: 39 cacagagttgaacgatcctt 58
>gb|AF119412.1|AF119412 Lupinus albus 1-aminocyclopropane-1-carboxylate synthase 2 (ACS2) gene, partial cds Length = 3371 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 caacaacacggttgcttgac 412 |||||||||||||||||||| Sbjct: 838 caacaacacggttgcttgac 819
>gb|AY375362.1| Streptococcus agalactiae serotype II Cps2C, Cps2D, Cps2E, Cps2F, Cps2G, Cps2H, Cps2I, Cps2J, Cps2K, Cps2L, NeuB, NeuC, and NeuD genes, complete cds; and NeuA gene, partial cds Length = 13421 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 cttactgaagccatgatatc 159 |||||||||||||||||||| Sbjct: 7459 cttactgaagccatgatatc 7440
>gb|AC135628.8| Homo sapiens chromosome 15, clone RP11-883G10, complete sequence Length = 137088 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 tcacaacagttgagttttat 106 |||||||||||||||||||| Sbjct: 108393 tcacaacagttgagttttat 108374
>gb|AC109491.3| Homo sapiens chromosome 5 clone RP11-727F19, complete sequence Length = 127489 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 cagtgatgaaacaaacaagt 341 |||||||||||||||||||| Sbjct: 69419 cagtgatgaaacaaacaagt 69438
>gb|AC010517.3|AC010517 Homo sapiens chromosome 19 clone LLNLR-255F4, complete sequence Length = 43705 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 cacagagttgaacgatcctt 595 |||||||||||||||||||| Sbjct: 668 cacagagttgaacgatcctt 687
>ref|XM_310792.2| Anopheles gambiae str. PEST ENSANGP00000015585 (ENSANGG00000013096), partial mRNA Length = 1725 Score = 40.1 bits (20), Expect = 8.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 558 ggaggtgtgcaatgcctacacagagttgaacgatcc 593 |||||||||||| || ||||| ||| |||||||||| Sbjct: 1431 ggaggtgtgcaacgcgtacaccgagctgaacgatcc 1466
>emb|Z63828.1|HS90G9F H.sapiens CpG island DNA genomic Mse1 fragment, clone 90g9, forward read cpg90g9.ft1a Length = 277 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 cacagagttgaacgatcctt 595 |||||||||||||||||||| Sbjct: 183 cacagagttgaacgatcctt 164
>emb|Z55372.1|HS37A8F H.sapiens CpG island DNA genomic Mse1 fragment, clone 37a8, forward read cpg37a8.ft1a Length = 286 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 cacagagttgaacgatcctt 595 |||||||||||||||||||| Sbjct: 160 cacagagttgaacgatcctt 179
>emb|Z57697.1|HS18H3R H.sapiens CpG island DNA genomic Mse1 fragment, clone 18h3, reverse read cpg18h3.rt1b Length = 265 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 cacagagttgaacgatcctt 595 |||||||||||||||||||| Sbjct: 158 cacagagttgaacgatcctt 177
>emb|Z56579.1|HS12B11F H.sapiens CpG island DNA genomic Mse1 fragment, clone 12b11, forward read cpg12b11.ft1b Length = 275 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 cacagagttgaacgatcctt 595 |||||||||||||||||||| Sbjct: 183 cacagagttgaacgatcctt 164
>emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E (5 of 5) Length = 2199546 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 tggagataccgaaagatatt 319 |||||||||||||||||||| Sbjct: 691484 tggagataccgaaagatatt 691503
>gb|AE017332.1| Mycoplasma hyopneumoniae 232, complete genome Length = 892758 Score = 40.1 bits (20), Expect = 8.6 Identities = 47/56 (83%) Strand = Plus / Minus Query: 63 ttgatttaacacacaatcctgaattcacaacagttgagttttatatggcttatgca 118 |||||| ||| || |||||||||||||| || |||| |||||| |||||||||| Sbjct: 212262 ttgattcaactcataatcctgaattcacctcaattgaattttatcaggcttatgca 212207
>dbj|AK114863.1| Ciona intestinalis cDNA, clone:cieg020g13, full insert sequence Length = 2205 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 1 ttggttgttggtggattggaccgtgtctatga 32 |||||||||||||| ||||| ||||| ||||| Sbjct: 933 ttggttgttggtgggttggatcgtgtgtatga 964
>gb|U97329.1|MNU97329 Makaira nigricans ryanodine receptor RyR1 isoform (RyR1) mRNA, complete cds Length = 16313 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 tttatatggcttatgcagat 121 |||||||||||||||||||| Sbjct: 11335 tttatatggcttatgcagat 11354
>gb|S49993.1|S49993 {R-DNA, alphoid repetitive sequence, satellite DNA} [human, placenta, clone pH4-2, Genomic, 338 nt] Length = 338 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 cacagagttgaacgatcctt 595 |||||||||||||||||||| Sbjct: 39 cacagagttgaacgatcctt 58
>emb|X60717.1|HSPS3C Human clone ps3 DNA Length = 340 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 cacagagttgaacgatcctt 595 |||||||||||||||||||| Sbjct: 83 cacagagttgaacgatcctt 102
>emb|AJ295044.1|HSA295044 Homo sapiens alpha satellite, pZ5.1 probe Length = 685 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 cacagagttgaacgatcctt 595 |||||||||||||||||||| Sbjct: 379 cacagagttgaacgatcctt 398
>emb|AJ295042.1|HSA295042 Homo sapiens alpha satellite, alphaRI-14 probe Length = 346 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 cacagagttgaacgatcctt 595 |||||||||||||||||||| Sbjct: 40 cacagagttgaacgatcctt 59
>emb|V00579.1|HSREP1 Human repetitive DNA sequence Length = 171 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 cacagagttgaacgatcctt 595 |||||||||||||||||||| Sbjct: 41 cacagagttgaacgatcctt 60
>emb|X13632.1|HSAR1261 Human alphoid repetitive DNA sequence (alpha-R1-126, 1'monomer) Length = 171 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 cacagagttgaacgatcctt 595 |||||||||||||||||||| Sbjct: 39 cacagagttgaacgatcctt 58
>emb|X13630.1|HSAR1071 Human alphoid repetitive DNA sequence (alpha-R1-107, 1'monomer) Length = 171 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 cacagagttgaacgatcctt 595 |||||||||||||||||||| Sbjct: 39 cacagagttgaacgatcctt 58
>emb|X13647.1|HSAR911 Human alphoid repetitive DNA sequence (alpha-R1-9, 1'monomer) Length = 171 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 cacagagttgaacgatcctt 595 |||||||||||||||||||| Sbjct: 39 cacagagttgaacgatcctt 58
>emb|X13642.1|HSAR201 Human alphoid repetitive DNA sequence (alpha-R1-20, 1'monomer) Length = 171 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 cacagagttgaacgatcctt 595 |||||||||||||||||||| Sbjct: 39 cacagagttgaacgatcctt 58
>emb|X13645.1|HSAR51 Human alphoid repetitive DNA sequence (alpha-R1-5, 1'monomer) Length = 171 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 cacagagttgaacgatcctt 595 |||||||||||||||||||| Sbjct: 39 cacagagttgaacgatcctt 58
>emb|X13638.1|HSAR61 Human alphoid repetitive DNA sequence (alpha-R1-6, 1'monomer) Length = 171 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 cacagagttgaacgatcctt 595 |||||||||||||||||||| Sbjct: 39 cacagagttgaacgatcctt 58
>emb|X13634.1|HSAR31 Human alphoid repetitive DNA sequence (alpha-R1-3, 1'monomer) Length = 171 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 cacagagttgaacgatcctt 595 |||||||||||||||||||| Sbjct: 39 cacagagttgaacgatcctt 58
>gb|J00305.1|HUMSAT1 human tandem rptunit frm eco-r1 digest of satellite dna Length = 342 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 cacagagttgaacgatcctt 595 |||||||||||||||||||| Sbjct: 210 cacagagttgaacgatcctt 229 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 cacagagttgaacgatcctt 595 |||||||||||||||||||| Sbjct: 39 cacagagttgaacgatcctt 58
>gb|M20435.1|HUMRSCNTN Human alphoid satellite DNA repeat (h-alpha-RI), clone 10 Length = 340 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 cacagagttgaacgatcctt 595 |||||||||||||||||||| Sbjct: 39 cacagagttgaacgatcctt 58
>gb|M20434.1|HUMRSCNTM Human alphoid satellite DNA repeat (h-alpha-RI), clone 9 Length = 340 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 cacagagttgaacgatcctt 595 |||||||||||||||||||| Sbjct: 39 cacagagttgaacgatcctt 58
>gb|M18124.1|HUMRSCNTJ Human alphoid repeat (alpha-RI-DNA), clone alpha-31 Length = 344 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 cacagagttgaacgatcctt 595 |||||||||||||||||||| Sbjct: 39 cacagagttgaacgatcctt 58
>gb|M18123.1|HUMRSCNTI Human alphoid repeat (alpha-RI-DNA), clone alpha-82 Length = 344 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 cacagagttgaacgatcctt 595 |||||||||||||||||||| Sbjct: 39 cacagagttgaacgatcctt 58
>gb|M18122.1|HUMRSCNTH Human alphoid repeat (alpha-RI-DNA), clone alpha-83 Length = 344 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 cacagagttgaacgatcctt 595 |||||||||||||||||||| Sbjct: 39 cacagagttgaacgatcctt 58
>gb|K00901.1|HUMRSCNT Human centromere tandem repetitive DNA Length = 340 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 cacagagttgaacgatcctt 595 |||||||||||||||||||| Sbjct: 39 cacagagttgaacgatcctt 58
>gb|M28034.1|HUMRSALPD Human alphoid repetitive DNA, subclone p340-11A Length = 134 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 cacagagttgaacgatcctt 595 |||||||||||||||||||| Sbjct: 2 cacagagttgaacgatcctt 21
>gb|M10479.1|HUMRSA Human repetitive sequence alpha Length = 92 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 cacagagttgaacgatcctt 595 |||||||||||||||||||| Sbjct: 39 cacagagttgaacgatcctt 58
>gb|M58446.1|HUMASATD Human alpha-satellite DNA D16Z2, clone pSE16-2 Length = 680 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 cacagagttgaacgatcctt 595 |||||||||||||||||||| Sbjct: 40 cacagagttgaacgatcctt 59
>gb|M28426.1|HUMARDNA Human alphoid repetitive DNA Length = 166 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 cacagagttgaacgatcctt 595 |||||||||||||||||||| Sbjct: 29 cacagagttgaacgatcctt 48 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,389,050 Number of Sequences: 3902068 Number of extensions: 5389050 Number of successful extensions: 106280 Number of sequences better than 10.0: 154 Number of HSP's better than 10.0 without gapping: 152 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 105665 Number of HSP's gapped (non-prelim): 568 length of query: 632 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 609 effective length of database: 17,143,297,704 effective search space: 10440268301736 effective search space used: 10440268301736 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
