Clone Name | bags9g13 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK065170.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002C19, full insert sequence Length = 1842 Score = 224 bits (113), Expect = 2e-55 Identities = 238/279 (85%), Gaps = 3/279 (1%) Strand = Plus / Plus Query: 191 tcgccgttcaaccccaacaatcccatgttcagggttcagagttcgcctaacctccccaat 250 |||||||||||||| |||||||| ||||||||||||||||| ||||| |||||||| ||| Sbjct: 573 tcgccgttcaacccgaacaatccgatgttcagggttcagagctcgcccaacctcccgaat 632 Query: 251 ggcgttgctgc---tgggagcccgttcaaacagccgcctttcgcgatgaacaatgcggtc 307 | ||| | || ||| || ||||||| |||||||||||||| ||| ||||||||| Sbjct: 633 gccgtcggcgccggtggtggcgcgttcaagcagccgcctttcgccatgggcaatgcggtt 692 Query: 308 gctgcttccaccgttggtgtgtacaaatcaagggacatgccgaagccaaagacagcgcaa 367 || | || || || ||||||||| | ||||||||||||||||| | ||| | |||||| Sbjct: 693 gccggatctacggtcggtgtgtacggaacaagggacatgccgaaggcgaaggcggcgcaa 752 Query: 368 ttaaccatcttctacgctggttctgtcaatgtattcaacaacgtctcagcagaaaaggct 427 || |||||||| || ||||||||||| |||||||||||||||||||| | || |||||| Sbjct: 753 ttgaccatcttttatgctggttctgtaaatgtattcaacaacgtctcgccggagaaggct 812 Query: 428 caggaactcatgttcttagctagcagaggatctcttcca 466 ||||||||||||||||||||||||||||||||||||||| Sbjct: 813 caggaactcatgttcttagctagcagaggatctcttcca 851 Score = 40.1 bits (20), Expect = 7.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 70 atcgtttggcgctgagaaccatggcagcgtgcagtacgccgccgccgc 117 ||||||||| || |||| ||| |||| | |||||||||||||||||| Sbjct: 455 atcgtttggtgccgagagccacggcatcccgcagtacgccgccgccgc 502
>dbj|AK071001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075J15, full insert sequence Length = 1443 Score = 216 bits (109), Expect = 6e-53 Identities = 237/279 (84%), Gaps = 3/279 (1%) Strand = Plus / Plus Query: 191 tcgccgttcaaccccaacaatcccatgttcagggttcagagttcgcctaacctccccaat 250 ||||| |||||||| |||||||| ||||||||||||||||| ||||| |||||||| ||| Sbjct: 207 tcgccattcaacccgaacaatccgatgttcagggttcagagctcgcccaacctcccgaat 266 Query: 251 ggcgttgctgc---tgggagcccgttcaaacagccgcctttcgcgatgaacaatgcggtc 307 | ||| | || ||| || ||||||| |||||||||||||| ||| ||||||||| Sbjct: 267 gccgtcggcgccggtggtggcgcgttcaagcagccgcctttcgccatgggcaatgcggtt 326 Query: 308 gctgcttccaccgttggtgtgtacaaatcaagggacatgccgaagccaaagacagcgcaa 367 || | || || || ||||||||| | ||||||||||||||||| | ||| | |||||| Sbjct: 327 gccggatctacggtcggtgtgtacggaacaagggacatgccgaaggcgaaggcggcgcaa 386 Query: 368 ttaaccatcttctacgctggttctgtcaatgtattcaacaacgtctcagcagaaaaggct 427 || |||||||| || ||||||||||| |||||||||||||||||||| | || |||||| Sbjct: 387 ttgaccatcttttatgctggttctgtaaatgtattcaacaacgtctcgccggagaaggct 446 Query: 428 caggaactcatgttcttagctagcagaggatctcttcca 466 ||||||||||||||||||||||||||||||||||||||| Sbjct: 447 caggaactcatgttcttagctagcagaggatctcttcca 485
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 89.7 bits (45), Expect = 9e-15 Identities = 69/77 (89%) Strand = Plus / Minus Query: 338 agggacatgccgaagccaaagacagcgcaattaaccatcttctacgctggttctgtcaat 397 ||||||||||||||| | ||| | |||||||| |||||||| || ||||||||||| ||| Sbjct: 14004215 agggacatgccgaaggcgaaggcggcgcaattgaccatcttttatgctggttctgtaaat 14004156 Query: 398 gtattcaacaacgtctc 414 ||||||||||||||||| Sbjct: 14004155 gtattcaacaacgtctc 14004139 Score = 87.7 bits (44), Expect = 3e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 423 aggctcaggaactcatgttcttagctagcagaggatctcttcca 466 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14004033 aggctcaggaactcatgttcttagctagcagaggatctcttcca 14003990 Score = 81.8 bits (41), Expect = 2e-12 Identities = 100/119 (84%), Gaps = 3/119 (2%) Strand = Plus / Minus Query: 191 tcgccgttcaaccccaacaatcccatgttcagggttcagagttcgcctaacctccccaat 250 |||||||||||||| |||||||| ||||||||||||||||| ||||| |||||||| ||| Sbjct: 14004471 tcgccgttcaacccgaacaatccgatgttcagggttcagagctcgcccaacctcccgaat 14004412 Query: 251 ggcgttgctgc---tgggagcccgttcaaacagccgcctttcgcgatgaacaatgcggt 306 | ||| | || ||| || ||||||| |||||||||||||| ||| ||||||||| Sbjct: 14004411 gccgtcggcgccggtggtggcgcgttcaagcagccgcctttcgccatgggcaatgcggt 14004353 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ggcgagctcgccttctccaag 35 ||||||||||||||||||||| Sbjct: 14052280 ggcgagctcgccttctccaag 14052260 Score = 40.1 bits (20), Expect = 7.3 Identities = 41/48 (85%) Strand = Plus / Minus Query: 70 atcgtttggcgctgagaaccatggcagcgtgcagtacgccgccgccgc 117 ||||||||| || |||| ||| |||| | |||||||||||||||||| Sbjct: 14004589 atcgtttggtgccgagagccacggcatcccgcagtacgccgccgccgc 14004542
>dbj|AP005321.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0650H04 Length = 134533 Score = 89.7 bits (45), Expect = 9e-15 Identities = 69/77 (89%) Strand = Plus / Minus Query: 338 agggacatgccgaagccaaagacagcgcaattaaccatcttctacgctggttctgtcaat 397 ||||||||||||||| | ||| | |||||||| |||||||| || ||||||||||| ||| Sbjct: 106689 agggacatgccgaaggcgaaggcggcgcaattgaccatcttttatgctggttctgtaaat 106630 Query: 398 gtattcaacaacgtctc 414 ||||||||||||||||| Sbjct: 106629 gtattcaacaacgtctc 106613 Score = 87.7 bits (44), Expect = 3e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 423 aggctcaggaactcatgttcttagctagcagaggatctcttcca 466 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106507 aggctcaggaactcatgttcttagctagcagaggatctcttcca 106464 Score = 81.8 bits (41), Expect = 2e-12 Identities = 100/119 (84%), Gaps = 3/119 (2%) Strand = Plus / Minus Query: 191 tcgccgttcaaccccaacaatcccatgttcagggttcagagttcgcctaacctccccaat 250 |||||||||||||| |||||||| ||||||||||||||||| ||||| |||||||| ||| Sbjct: 106945 tcgccgttcaacccgaacaatccgatgttcagggttcagagctcgcccaacctcccgaat 106886 Query: 251 ggcgttgctgc---tgggagcccgttcaaacagccgcctttcgcgatgaacaatgcggt 306 | ||| | || ||| || ||||||| |||||||||||||| ||| ||||||||| Sbjct: 106885 gccgtcggcgccggtggtggcgcgttcaagcagccgcctttcgccatgggcaatgcggt 106827 Score = 40.1 bits (20), Expect = 7.3 Identities = 41/48 (85%) Strand = Plus / Minus Query: 70 atcgtttggcgctgagaaccatggcagcgtgcagtacgccgccgccgc 117 ||||||||| || |||| ||| |||| | |||||||||||||||||| Sbjct: 107063 atcgtttggtgccgagagccacggcatcccgcagtacgccgccgccgc 107016
>dbj|AK059728.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-D12, full insert sequence Length = 1098 Score = 89.7 bits (45), Expect = 9e-15 Identities = 69/77 (89%) Strand = Plus / Plus Query: 338 agggacatgccgaagccaaagacagcgcaattaaccatcttctacgctggttctgtcaat 397 ||||||||||||||| | ||| | |||||||| |||||||| || ||||||||||| ||| Sbjct: 228 agggacatgccgaaggcgaaggcggcgcaattgaccatcttttatgctggttctgtaaat 287 Query: 398 gtattcaacaacgtctc 414 ||||||||||||||||| Sbjct: 288 gtattcaacaacgtctc 304 Score = 87.7 bits (44), Expect = 3e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 423 aggctcaggaactcatgttcttagctagcagaggatctcttcca 466 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 aggctcaggaactcatgttcttagctagcagaggatctcttcca 453 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 270 cgttcaaacagccgcctttcgcgatgaacaatgcggt 306 ||||||| |||||||||||||| ||| ||||||||| Sbjct: 54 cgttcaagcagccgcctttcgccatgggcaatgcggt 90 Score = 40.1 bits (20), Expect = 7.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 220 cagggttcagagttcgcctaacctccccaatg 251 |||||||||||| ||||| |||||||| |||| Sbjct: 1 cagggttcagagctcgcccaacctcccgaatg 32
>emb|CR318662.11| Zebrafish DNA sequence from clone CH211-213L7 in linkage group 10, complete sequence Length = 200648 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 461 cttccagctgcacccagtactg 482 |||||||||||||||||||||| Sbjct: 47263 cttccagctgcacccagtactg 47242
>emb|BX294445.10| Zebrafish DNA sequence from clone DKEY-265K11 in linkage group 1, complete sequence Length = 159780 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 461 cttccagctgcacccagtactg 482 |||||||||||||||||||||| Sbjct: 62776 cttccagctgcacccagtactg 62755
>emb|BX322643.8| Zebrafish DNA sequence from clone CH211-281E1 in linkage group 21, complete sequence Length = 153972 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 461 cttccagctgcacccagtactg 482 |||||||||||||||||||||| Sbjct: 48617 cttccagctgcacccagtactg 48638
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 131 ggtgggcagcctccacagcagc 152 |||||||||||||||||||||| Sbjct: 12335531 ggtgggcagcctccacagcagc 12335552
>emb|BX248130.8| Zebrafish DNA sequence from clone CH211-236E5 in linkage group 1, complete sequence Length = 183058 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 461 cttccagctgcacccagtactg 482 |||||||||||||||||||||| Sbjct: 110665 cttccagctgcacccagtactg 110644
>emb|BX649268.11| Zebrafish DNA sequence from clone DKEY-106J22 in linkage group 21, complete sequence Length = 172409 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 461 cttccagctgcacccagtactg 482 |||||||||||||||||||||| Sbjct: 156515 cttccagctgcacccagtactg 156536
>dbj|AP003511.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0578B12 Length = 151192 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 131 ggtgggcagcctccacagcagc 152 |||||||||||||||||||||| Sbjct: 51991 ggtgggcagcctccacagcagc 52012
>emb|CR846081.9| Zebrafish DNA sequence from clone CH211-241C4, complete sequence Length = 63654 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 461 cttccagctgcacccagtactg 482 |||||||||||||||||||||| Sbjct: 57004 cttccagctgcacccagtactg 56983
>emb|AL929267.14| Zebrafish DNA sequence from clone CH211-2M15 in linkage group 14, complete sequence Length = 175892 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 461 cttccagctgcacccagtactg 482 |||||||||||||||||||||| Sbjct: 18998 cttccagctgcacccagtactg 18977
>emb|AL732510.13| Zebrafish DNA sequence from clone RP71-39A15, complete sequence Length = 64579 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 461 cttccagctgcacccagtactg 482 |||||||||||||||||||||| Sbjct: 58586 cttccagctgcacccagtactg 58565
>gb|BT019042.1| Zea mays clone Contig562.F mRNA sequence Length = 709 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1 agcagcagcagcagggcgagctcgc 25 ||||||||| ||||||||||||||| Sbjct: 334 agcagcagccgcagggcgagctcgc 310
>gb|BT016367.1| Zea mays clone Contig200 mRNA sequence Length = 850 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 agcagcagcagcagggcgagctcgc 25 ||||||||| ||||||||||||||| Sbjct: 476 agcagcagccgcagggcgagctcgc 500
>gb|BT018290.1| Zea mays clone EL01T0205D03.c mRNA sequence Length = 803 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 agcagcagcagcagggcgagctcgc 25 ||||||||| ||||||||||||||| Sbjct: 472 agcagcagccgcagggcgagctcgc 496
>gb|BT018255.1| Zea mays clone EL01T0201E01.c mRNA sequence Length = 687 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1 agcagcagcagcagggcgagctcgc 25 ||||||||| ||||||||||||||| Sbjct: 280 agcagcagccgcagggcgagctcgc 256
>gb|BT016016.1| Drosophila melanogaster RE21729 full insert cDNA Length = 6215 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 gcagcctccacagcagcagca 156 ||||||||||||||||||||| Sbjct: 4441 gcagcctccacagcagcagca 4461
>gb|BT016864.1| Zea mays clone Contig697 mRNA sequence Length = 844 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1 agcagcagcagcagggcgagctcgc 25 ||||||||| ||||||||||||||| Sbjct: 372 agcagcagccgcagggcgagctcgc 348
>ref|XM_980670.1| PREDICTED: Mus musculus kelch-like 14 (Drosophila) (Klhl14), mRNA Length = 4018 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 gcagcctccacagcagcagca 156 ||||||||||||||||||||| Sbjct: 276 gcagcctccacagcagcagca 296
>ref|XM_905416.2| PREDICTED: Mus musculus kelch-like 14 (Drosophila) (Klhl14), mRNA Length = 4018 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 gcagcctccacagcagcagca 156 ||||||||||||||||||||| Sbjct: 276 gcagcctccacagcagcagca 296
>ref|XM_979146.1| PREDICTED: Mus musculus kelch-like 14 (Drosophila) (Klhl14), mRNA Length = 4018 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 gcagcctccacagcagcagca 156 ||||||||||||||||||||| Sbjct: 276 gcagcctccacagcagcagca 296
>gb|AC140283.3| Mus musculus BAC clone RP24-510I14 from chromosome 18, complete sequence Length = 149264 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 136 gcagcctccacagcagcagca 156 ||||||||||||||||||||| Sbjct: 106969 gcagcctccacagcagcagca 106949
>emb|BX322646.10| Zebrafish DNA sequence from clone DKEYP-11A1 in linkage group 14, complete sequence Length = 145265 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 461 cttccagctgcacccagtact 481 ||||||||||||||||||||| Sbjct: 108297 cttccagctgcacccagtact 108317
>emb|BX470241.5| Zebrafish DNA sequence from clone CH211-240J13 in linkage group 14, complete sequence Length = 163257 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 461 cttccagctgcacccagtact 481 ||||||||||||||||||||| Sbjct: 66177 cttccagctgcacccagtact 66157
>ref|NM_080531.2| Drosophila melanogaster leak CG5481-RA (lea), mRNA Length = 5400 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 gcagcctccacagcagcagca 156 ||||||||||||||||||||| Sbjct: 4442 gcagcctccacagcagcagca 4462
>gb|AY069363.1| Drosophila melanogaster LD06565 full length cDNA Length = 1523 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 gcagcctccacagcagcagca 156 ||||||||||||||||||||| Sbjct: 566 gcagcctccacagcagcagca 586
>gb|AF371262.1|AF371262 Zea mays 16kD gamma zein mRNA, complete cds Length = 798 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 agcagcagcagcagggcgagctcgc 25 ||||||||| ||||||||||||||| Sbjct: 449 agcagcagccgcagggcgagctcgc 473
>gb|AC092221.1|AC092221 Drosophila melanogaster, chromosome 2L, region 22A-22C, BAC clone BACR16D07, complete sequence Length = 170868 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 136 gcagcctccacagcagcagca 156 ||||||||||||||||||||| Sbjct: 74243 gcagcctccacagcagcagca 74223
>gb|AF312579.1|AF312579 Drosophila melanogaster roundabout 2 (robo2) mRNA, complete cds Length = 5381 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 gcagcctccacagcagcagca 156 ||||||||||||||||||||| Sbjct: 4423 gcagcctccacagcagcagca 4443
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 gtacgccgccgccgcgcgtgc 123 ||||||||||||||||||||| Sbjct: 4717522 gtacgccgccgccgcgcgtgc 4717542
>dbj|AP005732.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0014M19 Length = 129270 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ggcgagctcgccttctccaag 35 ||||||||||||||||||||| Sbjct: 31215 ggcgagctcgccttctccaag 31195
>emb|X53515.1|ZMZC1 Maize Zc1 gene for Zein Zc1 (14 kD zein-2) Length = 3864 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 agcagcagcagcagggcgagctcgc 25 ||||||||| ||||||||||||||| Sbjct: 1656 agcagcagccgcagggcgagctcgc 1680
>dbj|AK068506.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152P07, full insert sequence Length = 1049 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 ggcgagctcgccttctccaag 35 ||||||||||||||||||||| Sbjct: 303 ggcgagctcgccttctccaag 323
>dbj|AK059034.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-C07, full insert sequence Length = 1798 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 ggcgagctcgccttctccaag 35 ||||||||||||||||||||| Sbjct: 302 ggcgagctcgccttctccaag 322
>gb|AE003586.3| Drosophila melanogaster chromosome 2L, section 5 of 83 of the complete sequence Length = 306696 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 136 gcagcctccacagcagcagca 156 ||||||||||||||||||||| Sbjct: 147114 gcagcctccacagcagcagca 147094
>emb|BX005021.4| Zebrafish DNA sequence from clone DKEY-69D12, complete sequence Length = 188337 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 461 cttccagctgcacccagtact 481 ||||||||||||||||||||| Sbjct: 61549 cttccagctgcacccagtact 61569
>gb|AC003121.1|AC003121 Drosophila melanogaster (P1 DS00329 (D89)) DNA sequence, complete sequence Length = 69822 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 gcagcctccacagcagcagca 156 ||||||||||||||||||||| Sbjct: 64744 gcagcctccacagcagcagca 64764
>gb|L24390.1|RICPF1XXXA Oryza sativa positive element factor 1 (PF1) mRNA, complete cds Length = 953 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 ggcgagctcgccttctccaag 35 ||||||||||||||||||||| Sbjct: 266 ggcgagctcgccttctccaag 286
>gb|M16460.1|MZEZE16 Maize 16-kDa zein-2 mRNA, complete cds Length = 800 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 agcagcagcagcagggcgagctcgc 25 ||||||||| ||||||||||||||| Sbjct: 481 agcagcagccgcagggcgagctcgc 505
>gb|AC129219.3| Mus musculus BAC clone RP24-474C15 from chromosome 14, complete sequence Length = 195935 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 gctgagaaccatggcagcgtgcag 103 |||||||| ||||||||||||||| Sbjct: 30302 gctgagaagcatggcagcgtgcag 30279
>gb|AY574035.1| Zea mays rust resistance protein rp3-1 (rp3-1) gene, complete cds; and truncated rust resistance protein rp3-2t (rp3-2) gene, complete sequence Length = 276326 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 cagcctccacagcagcagca 156 |||||||||||||||||||| Sbjct: 226942 cagcctccacagcagcagca 226961
>ref|XM_545686.2| PREDICTED: Canis familiaris similar to transmembrane and coiled-coil domains 2 (LOC488569), mRNA Length = 2374 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 agcagcagcagcagggcgag 20 |||||||||||||||||||| Sbjct: 53 agcagcagcagcagggcgag 72
>emb|CR956360.10| Pig DNA sequence from clone CH242-245E12 on chromosome 7, complete sequence Length = 185507 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 tacggtgggcagcctccaca 147 |||||||||||||||||||| Sbjct: 97636 tacggtgggcagcctccaca 97655
>ref|XM_502874.1| Yarrowia lipolytica CLIB122, YALI0D15752g predicted mRNA Length = 1425 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 cagcctccacagcagcagca 156 |||||||||||||||||||| Sbjct: 1030 cagcctccacagcagcagca 1049
>gb|AC154805.2| Mus musculus BAC clone RP24-511O23 from chromosome 14, complete sequence Length = 151445 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 gctgagaaccatggcagcgtgcag 103 |||||||| ||||||||||||||| Sbjct: 121850 gctgagaagcatggcagcgtgcag 121827
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 acgccgccgccgcgcgtgcg 124 |||||||||||||||||||| Sbjct: 23317903 acgccgccgccgcgcgtgcg 23317922
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 agcagcagcagcagggcgagctcg 24 |||||||||||||| ||||||||| Sbjct: 6676250 agcagcagcagcagagcgagctcg 6676273
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 gccgccgccgcgcgtgcggc 126 |||||||||||||||||||| Sbjct: 1391960 gccgccgccgcgcgtgcggc 1391941
>dbj|AP004457.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0013B04 Length = 141319 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 acgccgccgccgcgcgtgcg 124 |||||||||||||||||||| Sbjct: 117254 acgccgccgccgcgcgtgcg 117273
>emb|BX571894.9| Mouse DNA sequence from clone RP23-203N8 on chromosome 2, complete sequence Length = 101718 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ctgagaaccatggcagcgtg 100 |||||||||||||||||||| Sbjct: 18151 ctgagaaccatggcagcgtg 18132
>dbj|AP004996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0027A02 Length = 140402 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 agcagcagcagcagggcgagctcg 24 |||||||||||||| ||||||||| Sbjct: 110625 agcagcagcagcagagcgagctcg 110648
>emb|Y14009.1|TAY14009 Triticum aestivum mRNA for gibberellin 20-oxidase, clone S37E Length = 1451 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 cagcagcagcagggcgagctcgcc 26 ||||||||||||||| |||||||| Sbjct: 1163 cagcagcagcagggccagctcgcc 1186
>gb|AC148877.2| Chlamydomonas reinhardtii clone cr-11B1, complete sequence Length = 52591 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 agcagcagcagcagggcgag 20 |||||||||||||||||||| Sbjct: 29226 agcagcagcagcagggcgag 29245
>emb|AL132865.1|CEY62E10A Caenorhabditis elegans YAC Y62E10A, complete sequence Length = 57237 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 cagcctccacagcagcagca 156 |||||||||||||||||||| Sbjct: 28405 cagcctccacagcagcagca 28386
>gb|AF058757.1|AF058757 Zea mays zinc finger protein ID1 (id1) mRNA, complete cds Length = 1625 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 agcagcagcagcagggcgag 20 |||||||||||||||||||| Sbjct: 545 agcagcagcagcagggcgag 564
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 cagcctccacagcagcagca 156 |||||||||||||||||||| Sbjct: 1929121 cagcctccacagcagcagca 1929102
>gb|M95682.1|TRFMTOFEAT Crithidia fasciculata mitochondrial heat shock protein mRNA sequence Length = 2031 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 agcagcagcagcagggcgag 20 |||||||||||||||||||| Sbjct: 1963 agcagcagcagcagggcgag 1982 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,502,779 Number of Sequences: 3902068 Number of extensions: 5502779 Number of successful extensions: 276962 Number of sequences better than 10.0: 60 Number of HSP's better than 10.0 without gapping: 60 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 275991 Number of HSP's gapped (non-prelim): 969 length of query: 536 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 513 effective length of database: 17,143,297,704 effective search space: 8794511722152 effective search space used: 8794511722152 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)