>Y872_HAEIN (Q57491) Hypothetical sugar transferase HI0872 (EC 2.-.-.-)|
          Length = 471

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 16/59 (27%), Positives = 30/59 (50%)
 Frame = +3

Query: 180 WLQRYSDGHWHSPEVADEQDGVPMWNPVLFQLPSHELLLFYKIGQEVQKWSGAMKRSLD 356
           WL+ +S   + S  V     G+P++N  +  + SHE++L        +  S  +KR++D
Sbjct: 221 WLRYFSTNGYRSVSVIPTLRGLPLYNTDMSFMFSHEIMLLQMNNNLAKLSSRILKRTMD 279

>GRIA4_RAT (P19493) Glutamate receptor 4 precursor (GluR-4) (GluR4) (GluR-D)|
           (Glutamate receptor ionotropic, AMPA 4) (AMPA-selective
           glutamate receptor 4)
          Length = 902

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 21/78 (26%), Positives = 35/78 (44%)
 Frame = +3

Query: 132 WLILVDPRXGAPDVRIWLQRYSDGHWHSPEVADEQDGVPMWNPVLFQLPSHELLLFYKIG 311
           W+ +V    G   V   + R+S   WH+ E  D ++G     P  F + +    L++ +G
Sbjct: 548 WMCIVFAYIGVSVVLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNS---LWFSLG 604

Query: 312 QEVQKWSGAMKRSLDGGI 365
             +Q+      RSL G I
Sbjct: 605 AFMQQGCDISPRSLSGRI 622

>GRIA4_MOUSE (Q9Z2W8) Glutamate receptor 4 precursor (GluR-4) (GluR4) (GluR-D)|
           (Glutamate receptor ionotropic, AMPA 4) (AMPA-selective
           glutamate receptor 4)
          Length = 902

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 21/78 (26%), Positives = 35/78 (44%)
 Frame = +3

Query: 132 WLILVDPRXGAPDVRIWLQRYSDGHWHSPEVADEQDGVPMWNPVLFQLPSHELLLFYKIG 311
           W+ +V    G   V   + R+S   WH+ E  D ++G     P  F + +    L++ +G
Sbjct: 548 WMCIVFAYIGVSVVLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNS---LWFSLG 604

Query: 312 QEVQKWSGAMKRSLDGGI 365
             +Q+      RSL G I
Sbjct: 605 AFMQQGCDISPRSLSGRI 622

>GRIA4_HUMAN (P48058) Glutamate receptor 4 precursor (GluR-4) (GluR4) (GluR-D)|
           (Glutamate receptor ionotropic, AMPA 4) (AMPA-selective
           glutamate receptor 4)
          Length = 902

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 21/78 (26%), Positives = 35/78 (44%)
 Frame = +3

Query: 132 WLILVDPRXGAPDVRIWLQRYSDGHWHSPEVADEQDGVPMWNPVLFQLPSHELLLFYKIG 311
           W+ +V    G   V   + R+S   WH+ E  D ++G     P  F + +    L++ +G
Sbjct: 548 WMCIVFAYIGVSVVLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNS---LWFSLG 604

Query: 312 QEVQKWSGAMKRSLDGGI 365
             +Q+      RSL G I
Sbjct: 605 AFMQQGCDISPRSLSGRI 622

>RFBP_SALTY (P26406) Undecaprenyl-phosphate galactose phosphotransferase (EC|
           2.7.8.6) (Galactosyl-P-P-undecaprenol synthetase)
          Length = 476

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 17/59 (28%), Positives = 29/59 (49%)
 Frame = +3

Query: 180 WLQRYSDGHWHSPEVADEQDGVPMWNPVLFQLPSHELLLFYKIGQEVQKWSGAMKRSLD 356
           WL+  S  H  S  V     G+P++N  +  + SHE++L        ++ S  +KR+ D
Sbjct: 226 WLRELSKHHCRSVTVVPSFRGLPLYNTDMSFIFSHEVMLLRIQNNLAKRSSRFLKRTFD 284

>NANH_BACFR (P31206) Sialidase precursor (EC 3.2.1.18) (Neuraminidase)|
          Length = 544

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +3

Query: 285 ELLLFYKIGQEVQKWSGAMKRSLDGGISWSEREQL 389
           +LL+F        +++  +K SLDGG++WS   QL
Sbjct: 466 DLLIFSNPNTTKGRYNTTIKISLDGGVTWSPEHQL 500

>JHD1_CAEBR (Q60V67) JmjC domain-containing histone demethylation protein 1 (EC|
           1.14.11.-)
          Length = 1063

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +3

Query: 267 FQLPSHELLLFYKIGQEVQKWSG 335
           F+LP +E LLFY +   V+KW+G
Sbjct: 274 FRLPYNEELLFYVMADYVKKWTG 296

>NANB_STRPN (Q54727) Sialidase B precursor (EC 3.2.1.18) (Neuraminidase B)|
          Length = 697

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
 Frame = +3

Query: 336 AMKRSLDGGISWSEREQLPPGILGPIKNKPFLLEDGRLLCGSS----VESWNSWGAWLEV 503
           AM  S + G SW + + LPP  LG   N  +L     L   SS      ++ S      +
Sbjct: 460 AMTTSQNRGESWEQFKLLPP-FLGEKHNGTYLCPGQGLALKSSNRLIFATYTSGELTYLI 518

Query: 504 TKDAGRTWRK 533
           + D+G+TW+K
Sbjct: 519 SDDSGQTWKK 528

>BEM1_YEAST (P29366) Bud emergence protein 1 (Suppressor of RHO3 protein 1)|
          Length = 551

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 19/53 (35%), Positives = 25/53 (47%)
 Frame = +3

Query: 318 VQKWSGAMKRSLDGGISWSEREQLPPGILGPIKNKPFLLEDGRLLCGSSVESW 476
           VQ+W   + R     IS    EQ     +   +NK   L DG LL  +SVES+
Sbjct: 239 VQEWKSNIARYKASNISLGSVEQQQQQSITKPQNKSAKLVDGELLVKASVESF 291

>NIFD_METTH (O27605) Nitrogenase molybdenum-iron protein alpha chain (EC|
           1.18.6.1) (Nitrogenase component I) (Dinitrogenase)
          Length = 469

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +1

Query: 187 RDTVMVTGILQKLLMSKMGCPCGILY-YFSSPLMSCSSSIRLVRKFRSGV 333
           R  ++++GI +K L  K+G PC +++ Y + P +     + L R   + +
Sbjct: 406 RPDIILSGIKEKYLAHKLGVPCVLIHSYENGPYIGFEGFLNLARDMYASI 455


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,608,130
Number of Sequences: 219361
Number of extensions: 2073195
Number of successful extensions: 6004
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6004
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4488201198
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)