ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags9f24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478412.1| Oryza sativa (japonica cultivar-group), mRNA 450 e-123
2dbj|AK106685.1| Oryza sativa (japonica cultivar-group) cDNA clon... 442 e-121
3gb|BT019038.1| Zea mays clone Contig555.F mRNA sequence 127 4e-26
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
5dbj|AP004269.4| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
6dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
7ref|XM_478413.1| Oryza sativa (japonica cultivar-group), mRNA 100 9e-18
8gb|AC136787.4| Oryza sativa (japonica cultivar-group) chromosome... 82 2e-12
9dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
10gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 82 2e-12
11gb|AC157348.25| Medicago truncatula clone mth2-133e20, complete ... 48 0.031
12gb|AC136954.14| Medicago truncatula clone mth2-7i1, complete seq... 48 0.031
13emb|AL390374.16| Human DNA sequence from clone CTD-2182L9 on chr... 44 0.48
14gb|AC132460.3| Mus musculus BAC clone RP23-31O23 from chromosome... 42 1.9
15gb|AC027688.5| Homo sapiens chromosome 16 clone RP11-883G14, com... 42 1.9
16gb|AC023819.7| Homo sapiens chromosome 16 clone RP11-1102H15, co... 42 1.9
17gb|AC008073.4| Homo sapiens BAC clone RP11-507M3 from 2, complet... 42 1.9
18emb|CT009658.7| Mouse DNA sequence from clone CH29-505N5 on chro... 42 1.9
19ref|NM_100640.2| Arabidopsis thaliana calcium-transporting ATPas... 40 7.5
20ref|XM_388843.1| Gibberella zeae PH-1 chromosome 2 hypothetical ... 40 7.5
21gb|AC124588.4| Mus musculus BAC clone RP23-133F15 from chromosom... 40 7.5
22gb|AC092989.6| Homo sapiens 3 BAC RP11-237P21 (Roswell Park Canc... 40 7.5
23gb|AC165171.2| Zea mays clone CH201-145P10, complete sequence 40 7.5
24gb|AC106707.9| Homo sapiens 3 BAC RP11-538P18 (Roswell Park Canc... 40 7.5
25gb|AY122079.1| Drosophila melanogaster AT19440 full insert cDNA 40 7.5
26dbj|AP007174.1| Aspergillus oryzae RIB40 genomic DNA, SC103 40 7.5
27ref|NM_165846.2| Drosophila melanogaster CG8234-RB, transcript v... 40 7.5
28ref|NM_136850.2| Drosophila melanogaster CG8234-RA, transcript v... 40 7.5
29dbj|AK132567.1| Mus musculus 0 day neonate head cDNA, RIKEN full... 40 7.5
30gb|BT004242.1| Arabidopsis thaliana clone RAFL15-22-H20 (R20661) 40 7.5
31gb|AC027335.6| Homo sapiens chromosome 5 clone CTD-2201E9, compl... 40 7.5
32gb|AC007583.2|F24B9 Arabidopsis thaliana chromosome 1 BAC F24B9 ... 40 7.5
33gb|AC157824.1| Mus musculus BAC clone RP23-265E4 from 1, complet... 40 7.5
34gb|AF117125.1|AF117125 Arabidopsis thaliana endoplasmic reticulu... 40 7.5
35gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 7.5
36emb|AL805969.13| Mouse DNA sequence from clone RP23-40L1 on chro... 40 7.5
37emb|AL606967.14| Mouse DNA sequence from clone RP23-304D5 on chr... 40 7.5 
>ref|XM_478412.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1747

 Score =  450 bits (227), Expect = e-123
 Identities = 447/519 (86%), Gaps = 1/519 (0%)
 Strand = Plus / Plus

                                                                        
Query: 29   tggagcattgtgaaggaggagctgacattttcagctgggagtgcccctttcagtagctgc 88
            ||||||||||| ||||||||  | |||||| ||||||| ||||||||||||| |||||||
Sbjct: 526  tggagcattgtcaaggaggaattcacatttccagctggaagtgcccctttcaatagctgc 585

                                                                        
Query: 89   cacgcttccaccattgtagagattgggaaagacaactttttggtggcttattttggtgga 148
            || ||||| || |||||||||| || ||| || |  ||||||||||||||||| ||||||
Sbjct: 586  catgcttctactattgtagagactgagaaggatagttttttggtggcttatttcggtgga 645

                                                                        
Query: 149  tccaaggnaaggtgctccggatgtcagaatctggttgcagagatacagtgatggtcactg 208
            ||||||| |||||||||| ||||| |  |||||| |||||||||||||||||||   |||
Sbjct: 646  tccaagg-aaggtgctcctgatgtgaagatctggctgcagagatacagtgatggctgctg 704

                                                                        
Query: 209  gcattctccagaagttgctgatgagcaagatggggtgcccatgtggaatcctgtactatt 268
            |||| ||||| |||| |||||||| || |||| ||| || |||||||||||||| || ||
Sbjct: 705  gcatactccacaagtggctgatgaacaggatgaggtacctatgtggaatcctgttctgtt 764

                                                                        
Query: 269  tcagctcccctctcatgagctgctcctcttctataagattggtcaggaagttcagaagtg 328
            ||||||||| ||||||||||| || |||||||| |||||||| || ||||||||||||||
Sbjct: 765  tcagctcccttctcatgagcttcttctcttctacaagattggccaagaagttcagaagtg 824

                                                                        
Query: 329  gagtggtgccatgaaaagatcgctggatggtggcatatcctggtcagagagagagcagct 388
            ||||||||||||||||||||| || ||||| || | | ||||||| |  ||||| |||||
Sbjct: 825  gagtggtgccatgaaaagatctctagatggaggaaaaacctggtcggcaagagaacagct 884

                                                                        
Query: 389  accgcctggtattcttggccctattaagaacaagcctttcctgcttgaagatggtcgcct 448
            ||| ||||| || ||||| ||||||||||| ||||||||| || |||||||||| ||| |
Sbjct: 885  accacctggcatccttggtcctattaagaataagcctttcttggttgaagatgggcgctt 944

                                                                        
Query: 449  actatgtgggtcgtcagtagaaagctggaactcttggggtgcatggctggaggtcacaaa 508
             ||||||||||| || || ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 945  gctatgtgggtcatctgttgaaagctggaactcttggggtgcatggcttgaggtcacaaa 1004

                                                   
Query: 509  agatgctggcaggacatggcggaagtacggtcctatata 547
            |||||| ||  | |||||||||||||| || ||||||||
Sbjct: 1005 agatgccggacgaacatggcggaagtatggccctatata 1043
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>dbj|AK106685.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-C01, full
            insert sequence
          Length = 1747

 Score =  442 bits (223), Expect = e-121
 Identities = 446/519 (85%), Gaps = 1/519 (0%)
 Strand = Plus / Plus

                                                                        
Query: 29   tggagcattgtgaaggaggagctgacattttcagctgggagtgcccctttcagtagctgc 88
            ||||||||||| ||||||||  | |||||| ||||||| ||||||||||||| |||||||
Sbjct: 526  tggagcattgtcaaggaggaattcacatttccagctggaagtgcccctttcaatagctgc 585

                                                                        
Query: 89   cacgcttccaccattgtagagattgggaaagacaactttttggtggcttattttggtgga 148
            || ||||| || |||||||||| || ||| || |  ||||||||||||||||| ||||||
Sbjct: 586  catgcttctactattgtagagactgagaaggatagttttttggtggcttatttcggtgga 645

                                                                        
Query: 149  tccaaggnaaggtgctccggatgtcagaatctggttgcagagatacagtgatggtcactg 208
            ||||||| |||||||||| ||||| |  |||||| |||||||||||||||||||   |||
Sbjct: 646  tccaagg-aaggtgctcctgatgtgaagatctggctgcagagatacagtgatggctgctg 704

                                                                        
Query: 209  gcattctccagaagttgctgatgagcaagatggggtgcccatgtggaatcctgtactatt 268
            |||| ||||| |||| |||||||| || |||| ||| || |||||||||||||| || ||
Sbjct: 705  gcatactccacaagtggctgatgaacaggatgaggtacctatgtggaatcctgttctgtt 764

                                                                        
Query: 269  tcagctcccctctcatgagctgctcctcttctataagattggtcaggaagttcagaagtg 328
            ||||||||| ||||||||||| || |||||||| |||||||| || ||||||||||||||
Sbjct: 765  tcagctcccttctcatgagcttcttctcttctacaagattggccaagaagttcagaagtg 824

                                                                        
Query: 329  gagtggtgccatgaaaagatcgctggatggtggcatatcctggtcagagagagagcagct 388
            ||||||||||||||||||||| || ||||| || | | ||||||| |  ||||| |||||
Sbjct: 825  gagtggtgccatgaaaagatctctagatggaggaaaaacctggtcggcaagagaacagct 884

                                                                        
Query: 389  accgcctggtattcttggccctattaagaacaagcctttcctgcttgaagatggtcgcct 448
            ||| ||||| || ||||| ||||||||||| ||||||||| || |||||||||| ||| |
Sbjct: 885  accacctggcatccttggtcctattaagaataagcctttcttggttgaagatgggcgctt 944

                                                                        
Query: 449  actatgtgggtcgtcagtagaaagctggaactcttggggtgcatggctggaggtcacaaa 508
             ||||||||||| || || ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 945  gctatgtgggtcatctgttgaaagctggaactcttggggtgcatggcttgaggtcacaaa 1004

                                                   
Query: 509  agatgctggcaggacatggcggaagtacggtcctatata 547
            |||||| ||    |||||||||||||| || ||||||||
Sbjct: 1005 agatgccggacaaacatggcggaagtatggccctatata 1043
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>gb|BT019038.1| Zea mays clone Contig555.F mRNA sequence
          Length = 861

 Score =  127 bits (64), Expect = 4e-26
 Identities = 127/148 (85%)
 Strand = Plus / Plus

                                                                       
Query: 367 cctggtcagagagagagcagctaccgcctggtattcttggccctattaagaacaagcctt 426
           ||||||||  |||||||||| |||| ||||| || ||||| |||||||| || |||||||
Sbjct: 14  cctggtcaccgagagagcagttacctcctggcatccttggtcctattaaaaataagcctt 73

                                                                       
Query: 427 tcctgcttgaagatggtcgcctactatgtgggtcgtcagtagaaagctggaactcttggg 486
           || ||||||||||||| |||||||| ||||| || ||||| ||||| ||||| |||||||
Sbjct: 74  tcttgcttgaagatgggcgcctactgtgtggatcatcagttgaaagttggaattcttggg 133

                                       
Query: 487 gtgcatggctggaggtcacaaaagatgc 514
           |||||||| | ||||| || ||||||||
Sbjct: 134 gtgcatgggttgaggttacgaaagatgc 161
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  115 bits (58), Expect = 2e-22
 Identities = 106/122 (86%)
 Strand = Plus / Plus

                                                                            
Query: 206      ctggcattctccagaagttgctgatgagcaagatggggtgcccatgtggaatcctgtact 265
                ||||||| ||||| |||| |||||||| || |||| ||| || |||||||||||||| ||
Sbjct: 19799081 ctggcatactccacaagtggctgatgaacaggatgaggtacctatgtggaatcctgttct 19799140

                                                                            
Query: 266      atttcagctcccctctcatgagctgctcctcttctataagattggtcaggaagttcagaa 325
                 ||||||||||| ||||||||||| || |||||||| |||||||| || |||||||||||
Sbjct: 19799141 gtttcagctcccttctcatgagcttcttctcttctacaagattggccaagaagttcagaa 19799200

                  
Query: 326      gt 327
                ||
Sbjct: 19799201 gt 19799202



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Plus

                                                                            
Query: 421      agcctttcctgcttgaagatggtcgcctactatgtgggtcgtcagtagaaagctggaact 480
                |||||||| || |||||||||| ||| | ||||||||||| || || |||||||||||||
Sbjct: 19799640 agcctttcttggttgaagatgggcgcttgctatgtgggtcatctgttgaaagctggaact 19799699

                                      
Query: 481      cttggggtgcatggctggaggt 502
                |||||||||||||||| |||||
Sbjct: 19799700 cttggggtgcatggcttgaggt 19799721



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 67/74 (90%), Gaps = 1/74 (1%)
 Strand = Plus / Plus

                                                                            
Query: 125      tttttggtggcttattttggtggatccaaggnaaggtgctccggatgtcagaatctggtt 184
                ||||||||||||||||| ||||||||||||| |||||||||| ||||| |  |||||| |
Sbjct: 19798917 tttttggtggcttatttcggtggatccaagg-aaggtgctcctgatgtgaagatctggct 19798975

                              
Query: 185      gcagagatacagtg 198
                ||||||||||||||
Sbjct: 19798976 gcagagatacagtg 19798989



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 71/81 (87%)
 Strand = Plus / Plus

                                                                            
Query: 29       tggagcattgtgaaggaggagctgacattttcagctgggagtgcccctttcagtagctgc 88
                ||||||||||| ||||||||  | |||||| ||||||| ||||||||||||| |||||||
Sbjct: 19798740 tggagcattgtcaaggaggaattcacatttccagctggaagtgcccctttcaatagctgc 19798799

                                     
Query: 89       cacgcttccaccattgtagag 109
                || ||||| || |||||||||
Sbjct: 19798800 catgcttctactattgtagag 19798820



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 79/93 (84%)
 Strand = Plus / Plus

                                                                            
Query: 326      gtggagtggtgccatgaaaagatcgctggatggtggcatatcctggtcagagagagagca 385
                |||||||||||||||||||||||| || ||||| || | | ||||||| |  ||||| ||
Sbjct: 19799332 gtggagtggtgccatgaaaagatctctagatggaggaaaaacctggtcggcaagagaaca 19799391

                                                 
Query: 386      gctaccgcctggtattcttggccctattaagaa 418
                |||||| ||||| || ||||| |||||||||||
Sbjct: 19799392 gctaccacctggcatccttggtcctattaagaa 19799424



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                       
Query: 368      ctggtcagagagagagcagctaccgcctggtattcttggccctattaagaacaag 422
                ||||||| |||||||||| || || |||||||| ||||||||||| |||||||||
Sbjct: 19803240 ctggtcaaagagagagcaactcccacctggtatccttggccctatcaagaacaag 19803294



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                                 
Query: 499      aggtcacaaaagatgctggcaggacatggcggaagtacggtcctatata 547
                |||||||||||||||| ||  | |||||||||||||| || ||||||||
Sbjct: 19799813 aggtcacaaaagatgccggacgaacatggcggaagtatggccctatata 19799861



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                        
Query: 462      tcagtagaaagctggaactcttggggtgcatggctggagg 501
                ||||| ||||||||||| || |||||||| ||||| ||||
Sbjct: 19803440 tcagttgaaagctggaattcatggggtgcttggcttgagg 19803479
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>dbj|AP004269.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0048D08
          Length = 145772

 Score =  115 bits (58), Expect = 2e-22
 Identities = 106/122 (86%)
 Strand = Plus / Plus

                                                                          
Query: 206    ctggcattctccagaagttgctgatgagcaagatggggtgcccatgtggaatcctgtact 265
              ||||||| ||||| |||| |||||||| || |||| ||| || |||||||||||||| ||
Sbjct: 131087 ctggcatactccacaagtggctgatgaacaggatgaggtacctatgtggaatcctgttct 131146

                                                                          
Query: 266    atttcagctcccctctcatgagctgctcctcttctataagattggtcaggaagttcagaa 325
               ||||||||||| ||||||||||| || |||||||| |||||||| || |||||||||||
Sbjct: 131147 gtttcagctcccttctcatgagcttcttctcttctacaagattggccaagaagttcagaa 131206

                
Query: 326    gt 327
              ||
Sbjct: 131207 gt 131208



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Plus

                                                                          
Query: 421    agcctttcctgcttgaagatggtcgcctactatgtgggtcgtcagtagaaagctggaact 480
              |||||||| || |||||||||| ||| | ||||||||||| || || |||||||||||||
Sbjct: 131646 agcctttcttggttgaagatgggcgcttgctatgtgggtcatctgttgaaagctggaact 131705

                                    
Query: 481    cttggggtgcatggctggaggt 502
              |||||||||||||||| |||||
Sbjct: 131706 cttggggtgcatggcttgaggt 131727



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 67/74 (90%), Gaps = 1/74 (1%)
 Strand = Plus / Plus

                                                                          
Query: 125    tttttggtggcttattttggtggatccaaggnaaggtgctccggatgtcagaatctggtt 184
              ||||||||||||||||| ||||||||||||| |||||||||| ||||| |  |||||| |
Sbjct: 130923 tttttggtggcttatttcggtggatccaagg-aaggtgctcctgatgtgaagatctggct 130981

                            
Query: 185    gcagagatacagtg 198
              ||||||||||||||
Sbjct: 130982 gcagagatacagtg 130995



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 71/81 (87%)
 Strand = Plus / Plus

                                                                          
Query: 29     tggagcattgtgaaggaggagctgacattttcagctgggagtgcccctttcagtagctgc 88
              ||||||||||| ||||||||  | |||||| ||||||| ||||||||||||| |||||||
Sbjct: 130746 tggagcattgtcaaggaggaattcacatttccagctggaagtgcccctttcaatagctgc 130805

                                   
Query: 89     cacgcttccaccattgtagag 109
              || ||||| || |||||||||
Sbjct: 130806 catgcttctactattgtagag 130826



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 79/93 (84%)
 Strand = Plus / Plus

                                                                          
Query: 326    gtggagtggtgccatgaaaagatcgctggatggtggcatatcctggtcagagagagagca 385
              |||||||||||||||||||||||| || ||||| || | | ||||||| |  ||||| ||
Sbjct: 131338 gtggagtggtgccatgaaaagatctctagatggaggaaaaacctggtcggcaagagaaca 131397

                                               
Query: 386    gctaccgcctggtattcttggccctattaagaa 418
              |||||| ||||| || ||||| |||||||||||
Sbjct: 131398 gctaccacctggcatccttggtcctattaagaa 131430



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                     
Query: 368    ctggtcagagagagagcagctaccgcctggtattcttggccctattaagaacaag 422
              ||||||| |||||||||| || || |||||||| ||||||||||| |||||||||
Sbjct: 135246 ctggtcaaagagagagcaactcccacctggtatccttggccctatcaagaacaag 135300



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                               
Query: 499    aggtcacaaaagatgctggcaggacatggcggaagtacggtcctatata 547
              |||||||||||||||| ||  | |||||||||||||| || ||||||||
Sbjct: 131819 aggtcacaaaagatgccggacgaacatggcggaagtatggccctatata 131867



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                      
Query: 462    tcagtagaaagctggaactcttggggtgcatggctggagg 501
              ||||| ||||||||||| || |||||||| ||||| ||||
Sbjct: 135446 tcagttgaaagctggaattcatggggtgcttggcttgagg 135485
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>dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0650C03
          Length = 144337

 Score =  115 bits (58), Expect = 2e-22
 Identities = 106/122 (86%)
 Strand = Plus / Plus

                                                                         
Query: 206   ctggcattctccagaagttgctgatgagcaagatggggtgcccatgtggaatcctgtact 265
             ||||||| ||||| |||| |||||||| || |||| ||| || |||||||||||||| ||
Sbjct: 39240 ctggcatactccacaagtggctgatgaacaggatgaggtacctatgtggaatcctgttct 39299

                                                                         
Query: 266   atttcagctcccctctcatgagctgctcctcttctataagattggtcaggaagttcagaa 325
              ||||||||||| ||||||||||| || |||||||| |||||||| || |||||||||||
Sbjct: 39300 gtttcagctcccttctcatgagcttcttctcttctacaagattggccaagaagttcagaa 39359

               
Query: 326   gt 327
             ||
Sbjct: 39360 gt 39361



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Plus

                                                                         
Query: 421   agcctttcctgcttgaagatggtcgcctactatgtgggtcgtcagtagaaagctggaact 480
             |||||||| || |||||||||| ||| | ||||||||||| || || |||||||||||||
Sbjct: 39799 agcctttcttggttgaagatgggcgcttgctatgtgggtcatctgttgaaagctggaact 39858

                                   
Query: 481   cttggggtgcatggctggaggt 502
             |||||||||||||||| |||||
Sbjct: 39859 cttggggtgcatggcttgaggt 39880



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 67/74 (90%), Gaps = 1/74 (1%)
 Strand = Plus / Plus

                                                                         
Query: 125   tttttggtggcttattttggtggatccaaggnaaggtgctccggatgtcagaatctggtt 184
             ||||||||||||||||| ||||||||||||| |||||||||| ||||| |  |||||| |
Sbjct: 39076 tttttggtggcttatttcggtggatccaagg-aaggtgctcctgatgtgaagatctggct 39134

                           
Query: 185   gcagagatacagtg 198
             ||||||||||||||
Sbjct: 39135 gcagagatacagtg 39148



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 71/81 (87%)
 Strand = Plus / Plus

                                                                         
Query: 29    tggagcattgtgaaggaggagctgacattttcagctgggagtgcccctttcagtagctgc 88
             ||||||||||| ||||||||  | |||||| ||||||| ||||||||||||| |||||||
Sbjct: 38899 tggagcattgtcaaggaggaattcacatttccagctggaagtgcccctttcaatagctgc 38958

                                  
Query: 89    cacgcttccaccattgtagag 109
             || ||||| || |||||||||
Sbjct: 38959 catgcttctactattgtagag 38979



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 79/93 (84%)
 Strand = Plus / Plus

                                                                         
Query: 326   gtggagtggtgccatgaaaagatcgctggatggtggcatatcctggtcagagagagagca 385
             |||||||||||||||||||||||| || ||||| || | | ||||||| |  ||||| ||
Sbjct: 39491 gtggagtggtgccatgaaaagatctctagatggaggaaaaacctggtcggcaagagaaca 39550

                                              
Query: 386   gctaccgcctggtattcttggccctattaagaa 418
             |||||| ||||| || ||||| |||||||||||
Sbjct: 39551 gctaccacctggcatccttggtcctattaagaa 39583



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                    
Query: 368   ctggtcagagagagagcagctaccgcctggtattcttggccctattaagaacaag 422
             ||||||| |||||||||| || || |||||||| ||||||||||| |||||||||
Sbjct: 43399 ctggtcaaagagagagcaactcccacctggtatccttggccctatcaagaacaag 43453



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                              
Query: 499   aggtcacaaaagatgctggcaggacatggcggaagtacggtcctatata 547
             |||||||||||||||| ||  | |||||||||||||| || ||||||||
Sbjct: 39972 aggtcacaaaagatgccggacgaacatggcggaagtatggccctatata 40020



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 462   tcagtagaaagctggaactcttggggtgcatggctggagg 501
             ||||| ||||||||||| || |||||||| ||||| ||||
Sbjct: 43599 tcagttgaaagctggaattcatggggtgcttggcttgagg 43638
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>ref|XM_478413.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1116

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 116/138 (84%)
 Strand = Plus / Plus

                                                                       
Query: 368 ctggtcagagagagagcagctaccgcctggtattcttggccctattaagaacaagccttt 427
           ||||||| |||||||||| || || |||||||| ||||||||||| ||||||||||||||
Sbjct: 351 ctggtcaaagagagagcaactcccacctggtatccttggccctatcaagaacaagccttt 410

                                                                       
Query: 428 cctgcttgaagatggtcgcctactatgtgggtcgtcagtagaaagctggaactcttgggg 487
           | ||||  | ||||| | ||| || |||||  | ||||| ||||||||||| || |||||
Sbjct: 411 cttgctcaaggatggccacctgctctgtggaacatcagttgaaagctggaattcatgggg 470

                             
Query: 488 tgcatggctggaggtcac 505
           ||| ||||| ||||||||
Sbjct: 471 tgcttggcttgaggtcac 488
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>gb|AC136787.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052B22,
              complete sequence
          Length = 156725

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 80/93 (86%)
 Strand = Plus / Plus

                                                                          
Query: 326    gtggagtggtgccatgaaaagatcgctggatggtggcatatcctggtcagagagagagca 385
              |||||| |||||||||||||||||||| |||||||| | | |||||||||||||| | | 
Sbjct: 125412 gtggagcggtgccatgaaaagatcgctagatggtggaagaacctggtcagagagaaaact 125471

                                               
Query: 386    gctaccgcctggtattcttggccctattaagaa 418
              ||||||  |||||||  |||| |||||||||||
Sbjct: 125472 gctaccatctggtatctttggtcctattaagaa 125504



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                             
Query: 499    aggtcacaaaagatgctggcaggacatggcggaagtacggtcctata 545
              |||||||| ||||||||||  ||||||||  ||||||||||||||||
Sbjct: 126043 aggtcacagaagatgctggtcggacatggaagaagtacggtcctata 126089



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                   
Query: 450    ctatgtgggtcgtcagtagaaagctggaactcttggggtgcatggctggaggt 502
              |||||||| || || || ||||||||||| || ||||| |||||||| |||||
Sbjct: 125802 ctatgtggatcatctgttgaaagctggaaatcatggggcgcatggcttgaggt 125854
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 80/93 (86%)
 Strand = Plus / Plus

                                                                            
Query: 326      gtggagtggtgccatgaaaagatcgctggatggtggcatatcctggtcagagagagagca 385
                |||||| |||||||||||||||||||| |||||||| | | |||||||||||||| | | 
Sbjct: 16809850 gtggagcggtgccatgaaaagatcgctagatggtggaagaacctggtcagagagaaaact 16809909

                                                 
Query: 386      gctaccgcctggtattcttggccctattaagaa 418
                ||||||  |||||||  |||| |||||||||||
Sbjct: 16809910 gctaccatctggtatctttggtcctattaagaa 16809942



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                               
Query: 499      aggtcacaaaagatgctggcaggacatggcggaagtacggtcctata 545
                |||||||| ||||||||||  ||||||||  ||||||||||||||||
Sbjct: 16810481 aggtcacagaagatgctggtcggacatggaagaagtacggtcctata 16810527



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                     
Query: 450      ctatgtgggtcgtcagtagaaagctggaactcttggggtgcatggctggaggt 502
                |||||||| || || || ||||||||||| || ||||| |||||||| |||||
Sbjct: 16810240 ctatgtggatcatctgttgaaagctggaaatcatggggcgcatggcttgaggt 16810292
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 80/93 (86%)
 Strand = Plus / Plus

                                                                            
Query: 326      gtggagtggtgccatgaaaagatcgctggatggtggcatatcctggtcagagagagagca 385
                |||||| |||||||||||||||||||| |||||||| | | |||||||||||||| | | 
Sbjct: 16903620 gtggagcggtgccatgaaaagatcgctagatggtggaagaacctggtcagagagaaaact 16903679

                                                 
Query: 386      gctaccgcctggtattcttggccctattaagaa 418
                ||||||  |||||||  |||| |||||||||||
Sbjct: 16903680 gctaccatctggtatctttggtcctattaagaa 16903712



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                               
Query: 499      aggtcacaaaagatgctggcaggacatggcggaagtacggtcctata 545
                |||||||| ||||||||||  ||||||||  ||||||||||||||||
Sbjct: 16904251 aggtcacagaagatgctggtcggacatggaagaagtacggtcctata 16904297



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                     
Query: 450      ctatgtgggtcgtcagtagaaagctggaactcttggggtgcatggctggaggt 502
                |||||||| || || || ||||||||||| || ||||| |||||||| |||||
Sbjct: 16904010 ctatgtggatcatctgttgaaagctggaaatcatggggcgcatggcttgaggt 16904062
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>gb|AC157348.25| Medicago truncatula clone mth2-133e20, complete sequence
          Length = 115475

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 459   tcgtcagtagaaagctggaactcttggggtgc 490
             ||||| || |||||||||||||||||||||||
Sbjct: 18929 tcgtctgttgaaagctggaactcttggggtgc 18960



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 249   atgtggaatcctgtactatt 268
             ||||||||||||||||||||
Sbjct: 17905 atgtggaatcctgtactatt 17924
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>gb|AC136954.14| Medicago truncatula clone mth2-7i1, complete sequence
          Length = 113505

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 459  tcgtcagtagaaagctggaactcttggggtgc 490
            ||||| || |||||||||||||||||||||||
Sbjct: 9644 tcgtctgttgaaagctggaactcttggggtgc 9613



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 249   atgtggaatcctgtactatt 268
             ||||||||||||||||||||
Sbjct: 10668 atgtggaatcctgtactatt 10649
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>emb|AL390374.16| Human DNA sequence from clone CTD-2182L9 on chromosome 20 Contains part
             of a novel gene (KIAA0964) and two CpG islands, complete
             sequence
          Length = 65831

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 494   gctggaggtcacaaaagatgct 515
             ||||||||||||||||||||||
Sbjct: 16833 gctggaggtcacaaaagatgct 16812
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>gb|AC132460.3| Mus musculus BAC clone RP23-31O23 from chromosome 17, complete sequence
          Length = 203971

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 415   agaacaagcctttcctgcttg 435
             |||||||||||||||||||||
Sbjct: 66001 agaacaagcctttcctgcttg 65981
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>gb|AC027688.5| Homo sapiens chromosome 16 clone RP11-883G14, complete sequence
          Length = 177147

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 33    gcattgtgaaggaggagctga 53
             |||||||||||||||||||||
Sbjct: 57585 gcattgtgaaggaggagctga 57565
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>gb|AC023819.7| Homo sapiens chromosome 16 clone RP11-1102H15, complete sequence
          Length = 136137

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 33    gcattgtgaaggaggagctga 53
             |||||||||||||||||||||
Sbjct: 31629 gcattgtgaaggaggagctga 31609
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>gb|AC008073.4| Homo sapiens BAC clone RP11-507M3 from 2, complete sequence
          Length = 166660

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 249   atgtggaatcctgtactattt 269
             |||||||||||||||||||||
Sbjct: 89087 atgtggaatcctgtactattt 89107
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>emb|CT009658.7| Mouse DNA sequence from clone CH29-505N5 on chromosome 17, complete
              sequence
          Length = 190153

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 415    agaacaagcctttcctgcttg 435
              |||||||||||||||||||||
Sbjct: 185503 agaacaagcctttcctgcttg 185483
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>ref|NM_100640.2| Arabidopsis thaliana calcium-transporting ATPase AT1G07670 mRNA,
           complete cds
          Length = 2594

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 218 agaagttgctgatgagcaagatgg 241
           |||||||||||||||||| |||||
Sbjct: 975 agaagttgctgatgagcaggatgg 952
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>ref|XM_388843.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08667.1)
            partial mRNA
          Length = 2313

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 277  cctctcatgagctgctcctc 296
            ||||||||||||||||||||
Sbjct: 1798 cctctcatgagctgctcctc 1817
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>gb|AC124588.4| Mus musculus BAC clone RP23-133F15 from chromosome 1, complete sequence
          Length = 141995

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    gtctgggtggagcattgtga 41
             ||||||||||||||||||||
Sbjct: 14822 gtctgggtggagcattgtga 14841
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>gb|AC092989.6| Homo sapiens 3 BAC RP11-237P21 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 168492

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 358   gtggcatatcctggtcagagagag 381
             ||||||||||||| ||||||||||
Sbjct: 18249 gtggcatatcctgctcagagagag 18226
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>gb|AC165171.2| Zea mays clone CH201-145P10, complete sequence
          Length = 233369

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 218    agaagttgctgatgagcaagatgg 241
              ||||| ||||||||||||||||||
Sbjct: 171255 agaaggtgctgatgagcaagatgg 171232
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>gb|AC106707.9| Homo sapiens 3 BAC RP11-538P18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 189059

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   attgggaaagacaacttttt 129
             ||||||||||||||||||||
Sbjct: 79934 attgggaaagacaacttttt 79915
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>gb|AY122079.1| Drosophila melanogaster AT19440 full insert cDNA
          Length = 1673

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 498 gaggtcacaaaagatgctgg 517
           ||||||||||||||||||||
Sbjct: 280 gaggtcacaaaagatgctgg 299
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>dbj|AP007174.1| Aspergillus oryzae RIB40 genomic DNA, SC103
          Length = 1282697

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 212    ttctccagaagttgctgatg 231
              ||||||||||||||||||||
Sbjct: 630138 ttctccagaagttgctgatg 630119
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>ref|NM_165846.2| Drosophila melanogaster CG8234-RB, transcript variant B (CG8234),
           mRNA
          Length = 1473

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 498 gaggtcacaaaagatgctgg 517
           ||||||||||||||||||||
Sbjct: 138 gaggtcacaaaagatgctgg 157
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>ref|NM_136850.2| Drosophila melanogaster CG8234-RA, transcript variant A (CG8234),
           mRNA
          Length = 1615

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 498 gaggtcacaaaagatgctgg 517
           ||||||||||||||||||||
Sbjct: 280 gaggtcacaaaagatgctgg 299
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>dbj|AK132567.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched
           library, clone:4832416A21 product:unclassifiable, full
           insert sequence
          Length = 3024

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 213 tctccagaagttgctgatga 232
           ||||||||||||||||||||
Sbjct: 470 tctccagaagttgctgatga 451
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>gb|BT004242.1| Arabidopsis thaliana clone RAFL15-22-H20 (R20661)
          Length = 1896

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 218 agaagttgctgatgagcaagatgg 241
           |||||||||||||||||| |||||
Sbjct: 211 agaagttgctgatgagcaggatgg 234
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>gb|AC027335.6| Homo sapiens chromosome 5 clone CTD-2201E9, complete sequence
          Length = 131499

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   ttttggtggcttattttggt 145
             ||||||||||||||||||||
Sbjct: 62132 ttttggtggcttattttggt 62113
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>gb|AC007583.2|F24B9 Arabidopsis thaliana chromosome 1 BAC F24B9 sequence, complete sequence
          Length = 107234

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 218   agaagttgctgatgagcaagatgg 241
             |||||||||||||||||| |||||
Sbjct: 73221 agaagttgctgatgagcaggatgg 73198
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>gb|AC157824.1| Mus musculus BAC clone RP23-265E4 from 1, complete sequence
          Length = 153577

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    gtctgggtggagcattgtga 41
             ||||||||||||||||||||
Sbjct: 72964 gtctgggtggagcattgtga 72945
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>gb|AF117125.1|AF117125 Arabidopsis thaliana endoplasmic reticulum-type
           calcium-transporting ATPase 4 (ECA4) mRNA, partial cds
          Length = 2534

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 218 agaagttgctgatgagcaagatgg 241
           |||||||||||||||||| |||||
Sbjct: 975 agaagttgctgatgagcaggatgg 952
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 425 tttcctgcttgaagatggtc 444
           ||||||||||||||||||||
Sbjct: 51  tttcctgcttgaagatggtc 70
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>emb|AL805969.13| Mouse DNA sequence from clone RP23-40L1 on chromosome 4, complete
             sequence
          Length = 252953

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 488   tgcatggctggaggtcacaa 507
             ||||||||||||||||||||
Sbjct: 19093 tgcatggctggaggtcacaa 19112
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>emb|AL606967.14| Mouse DNA sequence from clone RP23-304D5 on chromosome 4, complete
             sequence
          Length = 188425

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 213   tctccagaagttgctgatga 232
             ||||||||||||||||||||
Sbjct: 70969 tctccagaagttgctgatga 70950


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,105,891
Number of Sequences: 3902068
Number of extensions: 5105891
Number of successful extensions: 87109
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86943
Number of HSP's gapped (non-prelim): 159
length of query: 552
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 529
effective length of database: 17,143,297,704
effective search space: 9068804485416
effective search space used: 9068804485416
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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