ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags9f15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_188328.1| Oryza sativa (japonica cultivar-group), Ozsa807... 513 e-142
2dbj|AK101572.1| Oryza sativa (japonica cultivar-group) cDNA clon... 513 e-142
3dbj|AK101188.1| Oryza sativa (japonica cultivar-group) cDNA clon... 513 e-142
4dbj|AK067829.1| Oryza sativa (japonica cultivar-group) cDNA clon... 456 e-125
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 248 2e-62
6dbj|AP001551.1| Oryza sativa (japonica cultivar-group) genomic D... 248 2e-62
7emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete ... 44 0.59
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.59
9dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.59
10dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.59
11dbj|AK109748.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.59
12dbj|AK073500.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.59
13gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 44 0.59
14gb|BT017703.1| Zea mays clone EL01N0445G07.c mRNA sequence 42 2.3
15gb|AC131079.11| Mus musculus chromosome 14, clone RP23-434L17, c... 42 2.3
16gb|AC132329.4| Mus musculus BAC clone RP24-206F15 from chromosom... 42 2.3
17gb|AC123951.3| Mus musculus BAC clone RP23-166M23 from 18, compl... 42 2.3
18gb|AC020666.8| Oryza sativa chromosome 10 BAC OSJNBa0082M15 geno... 42 2.3
19dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
20gb|AC013472.8| Homo sapiens BAC clone RP11-503P10 from 2, comple... 42 2.3
21dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete ge... 42 2.3
22gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 2.3
23ref|NM_100040.2| Arabidopsis thaliana ferric-chelate reductase/ ... 40 9.3
24gb|DP000013.1| Otolemur garnettii target 1 genomic scaffold 40 9.3
25ref|XM_388693.1| Gibberella zeae PH-1 chromosome 2 hypothetical ... 40 9.3
26gb|AE014314.1| Homo sapiens chromosome 13q34 schizophrenia regio... 40 9.3
27emb|Z97055.1|HS388M5 Human DNA sequence from clone RP3-388M5 on ... 40 9.3
28emb|AL732618.6| Human DNA sequence from clone RP11-25L19 on chro... 40 9.3
29emb|AL162733.9| Human DNA sequence from clone RP11-397F23 on chr... 40 9.3
30emb|AL159982.17| Human DNA sequence from clone RP11-94P17 on chr... 40 9.3
31gb|AY302057.1| Arabidopsis thaliana ferric-chelate reductase (FR... 40 9.3
32gb|AC026199.6| Homo sapiens chromosome 3 clone RP11-507D6 map 3p... 40 9.3
33gb|DQ067263.1| Kocuria rosea maltooligosyl trehalose synthase (t... 40 9.3
34dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
35gb|AF074705.2|AF074705 Pseudomonas aeruginosa dihydroaeruginoic ... 40 9.3
36gb|AC026217.3|AC026217 Homo sapiens chromosome 3 clone RP11-812I... 40 9.3
37gb|AC026200.4|AC026200 Homo sapiens chromosome 3 clone RP11-534J... 40 9.3
38gb|AC069247.5|AC069247 Homo sapiens chromosome 3 clone RP11-489O... 40 9.3
39gb|AE004839.1| Pseudomonas aeruginosa PAO1, section 400 of 529 o... 40 9.3
40gb|AC006431.9| Homo sapiens 12 BAC RP11-451H11 (Roswell Park Can... 40 9.3
41gb|AY086007.1| Arabidopsis thaliana clone 205976 mRNA, complete ... 40 9.3
42gb|AC061957.3|F22L4 Sequence of BAC F22L4 from Arabidopsis thali... 40 9.3
43gb|AC146656.3| Otolemur garnettii clone CH256-389C8, complete se... 40 9.3
44dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete ge... 40 9.3
45dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 9.3
46dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
47dbj|AP005931.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
48emb|Y09581.1|ATFROHABG Arabidopsis thaliana FRO1 and FRO2 genes 40 9.3
49gb|AF184621.1|AF184621 Pseudomonas aeruginosa pyochelin syntheta... 40 9.3
50dbj|AK071637.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.3
51gb|AC149068.4| Mus musculus BAC clone RP23-7G19 from 18, complet... 40 9.3
52gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 9.3
53gb|AC147634.3| Mus musculus BAC clone RP23-305G22 from 10, compl... 40 9.3 
>ref|NM_188328.1| Oryza sativa (japonica cultivar-group), Ozsa8079 predicted mRNA
          Length = 2127

 Score =  513 bits (259), Expect = e-142
 Identities = 484/559 (86%)
 Strand = Plus / Plus

                                                                       
Query: 118 ctgctcgacctgctgccccagatccacgccctcttctccgaccagctccgcgtgatttcg 177
           |||||||||||| | ||||||||||||||||||||| |||| | |||||| |||||||| 
Sbjct: 310 ctgctcgacctgattccccagatccacgccctcttcgccgatccgctccgtgtgatttca 369

                                                                       
Query: 178 tacaaatggctaagccggaatttttctgtgtcatcaaatgatgccaagaggttgcttcag 237
           ||||||||||| ||| |||| || || || ||||| |||||| | |||||||||||||||
Sbjct: 370 tacaaatggctcagcaggaacttctcagtatcatccaatgattcaaagaggttgcttcag 429

                                                                       
Query: 238 gagtttgtcaacaaacatggaactgatcacgaagttatttacagtgtgtctgggtggtta 297
           ||||| ||||||||||||||  ||||||   |||| ||||||||||||||||| ||||||
Sbjct: 430 gagttcgtcaacaaacatggggctgatcttaaagtgatttacagtgtgtctggatggtta 489

                                                                       
Query: 298 aagaacaatcccgagaactattgtgtaaaactcacttcaggccctaaccttgaagaagca 357
           ||||| || |||   || ||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 490 aagaagaaccccacaaattattgtgtaaaactcacttcaggccataaacttgaagaagca 549

                                                                       
Query: 358 aggcggacatttaaaggttcttgttcagttcaggtttacagtatccaggcttgtattcca 417
           ||||    |||||||| ||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 550 aggcaagaatttaaagattcttgttcagttcaagtgtacagtatccaggcttgtattcca 609

                                                                       
Query: 418 aaagatactgctgtactttggaatcctgaatttgtgcaggcagaggagcttttcaaccag 477
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |
Sbjct: 610 aaagatactgctgtactttggaatcctgaatttgtacaggcagaggagctttttaaccgg 669

                                                                       
Query: 478 ccatttgatgaagaaaattgtttgagagataataggttctgtggtgtaaggaattctttt 537
           |||||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||
Sbjct: 670 ccatttgatgaagaaaattgtttgagagataataggttttgtggtgttttgaattctttt 729

                                                                       
Query: 538 gtcaagcgaactaccacagggaagcatgtaagctcaatgcccccaaagcctacaaatagt 597
           |||||||||||| | |  ||||||| ||| || ||| | || |||||||||| |||||||
Sbjct: 730 gtcaagcgaactgctaatgggaagcttgtgagttcatttccgccaaagcctataaatagt 789

                                                                       
Query: 598 gttatagcacctgcagtgccaaaacctagtagtgctacaaaagagcaatcttctattgtt 657
           |||   ||| |||||  |   ||| ||||||||||| ||||||| |||||| |||  | |
Sbjct: 790 gttgctgcagctgcaccgttgaaaactagtagtgctccaaaagaacaatctgctaagggt 849

                              
Query: 658 cgacagcaagatctacctg 676
           | |||||||| ||||||||
Sbjct: 850 caacagcaaggtctacctg 868
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>dbj|AK101572.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050J10, full
           insert sequence
          Length = 2205

 Score =  513 bits (259), Expect = e-142
 Identities = 484/559 (86%)
 Strand = Plus / Plus

                                                                       
Query: 118 ctgctcgacctgctgccccagatccacgccctcttctccgaccagctccgcgtgatttcg 177
           |||||||||||| | ||||||||||||||||||||| |||| | |||||| |||||||| 
Sbjct: 174 ctgctcgacctgattccccagatccacgccctcttcgccgatccgctccgtgtgatttca 233

                                                                       
Query: 178 tacaaatggctaagccggaatttttctgtgtcatcaaatgatgccaagaggttgcttcag 237
           ||||||||||| ||| |||| || || || ||||| |||||| | |||||||||||||||
Sbjct: 234 tacaaatggctcagcaggaacttctcagtatcatccaatgattcaaagaggttgcttcag 293

                                                                       
Query: 238 gagtttgtcaacaaacatggaactgatcacgaagttatttacagtgtgtctgggtggtta 297
           ||||| ||||||||||||||  ||||||   |||| ||||||||||||||||| ||||||
Sbjct: 294 gagttcgtcaacaaacatggggctgatcttaaagtgatttacagtgtgtctggatggtta 353

                                                                       
Query: 298 aagaacaatcccgagaactattgtgtaaaactcacttcaggccctaaccttgaagaagca 357
           ||||| || |||   || ||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 354 aagaagaaccccacaaattattgtgtaaaactcacttcaggccataaacttgaagaagca 413

                                                                       
Query: 358 aggcggacatttaaaggttcttgttcagttcaggtttacagtatccaggcttgtattcca 417
           ||||    |||||||| ||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 414 aggcaagaatttaaagattcttgttcagttcaagtgtacagtatccaggcttgtattcca 473

                                                                       
Query: 418 aaagatactgctgtactttggaatcctgaatttgtgcaggcagaggagcttttcaaccag 477
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |
Sbjct: 474 aaagatactgctgtactttggaatcctgaatttgtacaggcagaggagctttttaaccgg 533

                                                                       
Query: 478 ccatttgatgaagaaaattgtttgagagataataggttctgtggtgtaaggaattctttt 537
           |||||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||
Sbjct: 534 ccatttgatgaagaaaattgtttgagagataataggttttgtggtgttttgaattctttt 593

                                                                       
Query: 538 gtcaagcgaactaccacagggaagcatgtaagctcaatgcccccaaagcctacaaatagt 597
           |||||||||||| | |  ||||||| ||| || ||| | || |||||||||| |||||||
Sbjct: 594 gtcaagcgaactgctaatgggaagcttgtgagttcatttccgccaaagcctataaatagt 653

                                                                       
Query: 598 gttatagcacctgcagtgccaaaacctagtagtgctacaaaagagcaatcttctattgtt 657
           |||   ||| |||||  |   ||| ||||||||||| ||||||| |||||| |||  | |
Sbjct: 654 gttgctgcagctgcaccgttgaaaactagtagtgctccaaaagaacaatctgctaagggt 713

                              
Query: 658 cgacagcaagatctacctg 676
           | |||||||| ||||||||
Sbjct: 714 caacagcaaggtctacctg 732
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>dbj|AK101188.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030D20, full
           insert sequence
          Length = 2212

 Score =  513 bits (259), Expect = e-142
 Identities = 484/559 (86%)
 Strand = Plus / Plus

                                                                       
Query: 118 ctgctcgacctgctgccccagatccacgccctcttctccgaccagctccgcgtgatttcg 177
           |||||||||||| | ||||||||||||||||||||| |||| | |||||| |||||||| 
Sbjct: 181 ctgctcgacctgattccccagatccacgccctcttcgccgatccgctccgtgtgatttca 240

                                                                       
Query: 178 tacaaatggctaagccggaatttttctgtgtcatcaaatgatgccaagaggttgcttcag 237
           ||||||||||| ||| |||| || || || ||||| |||||| | |||||||||||||||
Sbjct: 241 tacaaatggctcagcaggaacttctcagtatcatccaatgattcaaagaggttgcttcag 300

                                                                       
Query: 238 gagtttgtcaacaaacatggaactgatcacgaagttatttacagtgtgtctgggtggtta 297
           ||||| ||||||||||||||  ||||||   |||| ||||||||||||||||| ||||||
Sbjct: 301 gagttcgtcaacaaacatggggctgatcttaaagtgatttacagtgtgtctggatggtta 360

                                                                       
Query: 298 aagaacaatcccgagaactattgtgtaaaactcacttcaggccctaaccttgaagaagca 357
           ||||| || |||   || ||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 361 aagaagaaccccacaaattattgtgtaaaactcacttcaggccataaacttgaagaagca 420

                                                                       
Query: 358 aggcggacatttaaaggttcttgttcagttcaggtttacagtatccaggcttgtattcca 417
           ||||    |||||||| ||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 421 aggcaagaatttaaagattcttgttcagttcaagtgtacagtatccaggcttgtattcca 480

                                                                       
Query: 418 aaagatactgctgtactttggaatcctgaatttgtgcaggcagaggagcttttcaaccag 477
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |
Sbjct: 481 aaagatactgctgtactttggaatcctgaatttgtacaggcagaggagctttttaaccgg 540

                                                                       
Query: 478 ccatttgatgaagaaaattgtttgagagataataggttctgtggtgtaaggaattctttt 537
           |||||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||
Sbjct: 541 ccatttgatgaagaaaattgtttgagagataataggttttgtggtgttttgaattctttt 600

                                                                       
Query: 538 gtcaagcgaactaccacagggaagcatgtaagctcaatgcccccaaagcctacaaatagt 597
           |||||||||||| | |  ||||||| ||| || ||| | || |||||||||| |||||||
Sbjct: 601 gtcaagcgaactgctaatgggaagcttgtgagttcatttccgccaaagcctataaatagt 660

                                                                       
Query: 598 gttatagcacctgcagtgccaaaacctagtagtgctacaaaagagcaatcttctattgtt 657
           |||   ||| |||||  |   ||| ||||||||||| ||||||| |||||| |||  | |
Sbjct: 661 gttgctgcagctgcaccgttgaaaactagtagtgctccaaaagaacaatctgctaagggt 720

                              
Query: 658 cgacagcaagatctacctg 676
           | |||||||| ||||||||
Sbjct: 721 caacagcaaggtctacctg 739
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>dbj|AK067829.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013121A07, full
            insert sequence
          Length = 2641

 Score =  456 bits (230), Expect = e-125
 Identities = 437/506 (86%)
 Strand = Plus / Plus

                                                                        
Query: 171  gatttcgtacaaatggctaagccggaatttttctgtgtcatcaaatgatgccaagaggtt 230
            |||||| ||||||||||| ||| |||| || || || ||||| |||||| | ||||||||
Sbjct: 664  gatttcatacaaatggctcagcaggaacttctcagtatcatccaatgattcaaagaggtt 723

                                                                        
Query: 231  gcttcaggagtttgtcaacaaacatggaactgatcacgaagttatttacagtgtgtctgg 290
            |||||||||||| ||||||||||||||  ||||||   |||| |||||||||||||||||
Sbjct: 724  gcttcaggagttcgtcaacaaacatggggctgatcttaaagtgatttacagtgtgtctgg 783

                                                                        
Query: 291  gtggttaaagaacaatcccgagaactattgtgtaaaactcacttcaggccctaaccttga 350
             ||||||||||| || |||   || ||||||||||||||||||||||||| ||| |||||
Sbjct: 784  atggttaaagaagaaccccacaaattattgtgtaaaactcacttcaggccataaacttga 843

                                                                        
Query: 351  agaagcaaggcggacatttaaaggttcttgttcagttcaggtttacagtatccaggcttg 410
            |||||||||||    |||||||| ||||||||||||||| || |||||||||||||||||
Sbjct: 844  agaagcaaggcaagaatttaaagattcttgttcagttcaagtgtacagtatccaggcttg 903

                                                                        
Query: 411  tattccaaaagatactgctgtactttggaatcctgaatttgtgcaggcagaggagctttt 470
            |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 904  tattccaaaagatactgctgtactttggaatcctgaatttgtacaggcagaggagctttt 963

                                                                        
Query: 471  caaccagccatttgatgaagaaaattgtttgagagataataggttctgtggtgtaaggaa 530
             |||| ||||||||||||||||||||||||||||||||||||||| ||||||||   |||
Sbjct: 964  taaccggccatttgatgaagaaaattgtttgagagataataggttttgtggtgttttgaa 1023

                                                                        
Query: 531  ttcttttgtcaagcgaactaccacagggaagcatgtaagctcaatgcccccaaagcctac 590
            ||||||||||||||||||| | |  ||||||| ||| || ||| | || |||||||||| 
Sbjct: 1024 ttcttttgtcaagcgaactgctaatgggaagcttgtgagttcatttccgccaaagcctat 1083

                                                                        
Query: 591  aaatagtgttatagcacctgcagtgccaaaacctagtagtgctacaaaagagcaatcttc 650
            ||||||||||   ||| |||||  |   ||| ||||||||||| ||||||| |||||| |
Sbjct: 1084 aaatagtgttgctgcagctgcaccgttgaaaactagtagtgctccaaaagaacaatctgc 1143

                                      
Query: 651  tattgttcgacagcaagatctacctg 676
            ||  | || |||||||| ||||||||
Sbjct: 1144 taagggtcaacagcaaggtctacctg 1169
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  248 bits (125), Expect = 2e-62
 Identities = 143/149 (95%)
 Strand = Plus / Minus

                                                                           
Query: 366     atttaaaggttcttgttcagttcaggtttacagtatccaggcttgtattccaaaagatac 425
               |||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 5721406 atttaaagattcttgttcagttcaagtgtacagtatccaggcttgtattccaaaagatac 5721347

                                                                           
Query: 426     tgctgtactttggaatcctgaatttgtgcaggcagaggagcttttcaaccagccatttga 485
               ||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||
Sbjct: 5721346 tgctgtactttggaatcctgaatttgtacaggcagaggagctttttaaccggccatttga 5721287

                                            
Query: 486     tgaagaaaattgtttgagagataataggt 514
               |||||||||||||||||||||||||||||
Sbjct: 5721286 tgaagaaaattgtttgagagataataggt 5721258



 Score =  125 bits (63), Expect = 2e-25
 Identities = 111/127 (87%)
 Strand = Plus / Minus

                                                                           
Query: 226     aggttgcttcaggagtttgtcaacaaacatggaactgatcacgaagttatttacagtgtg 285
               ||||||||||||||||| ||||||||||||||  ||||||   |||| ||||||||||||
Sbjct: 5721667 aggttgcttcaggagttcgtcaacaaacatggggctgatcttaaagtgatttacagtgtg 5721608

                                                                           
Query: 286     tctgggtggttaaagaacaatcccgagaactattgtgtaaaactcacttcaggccctaac 345
               ||||| ||||||||||| || |||   || ||||||||||||||||||||||||| ||| 
Sbjct: 5721607 tctggatggttaaagaagaaccccacaaattattgtgtaaaactcacttcaggccataaa 5721548

                      
Query: 346     cttgaag 352
               |||||||
Sbjct: 5721547 cttgaag 5721541



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 133/166 (80%)
 Strand = Plus / Minus

                                                                           
Query: 511     aggttctgtggtgtaaggaattcttttgtcaagcgaactaccacagggaagcatgtaagc 570
               ||||| ||||||||   |||||||||||||||||||||| | |  ||||||| ||| || 
Sbjct: 5721026 aggttttgtggtgttttgaattcttttgtcaagcgaactgctaatgggaagcttgtgagt 5720967

                                                                           
Query: 571     tcaatgcccccaaagcctacaaatagtgttatagcacctgcagtgccaaaacctagtagt 630
               ||| | || |||||||||| ||||||||||   ||| |||||  |   ||| ||||||||
Sbjct: 5720966 tcatttccgccaaagcctataaatagtgttgctgcagctgcaccgttgaaaactagtagt 5720907

                                                             
Query: 631     gctacaaaagagcaatcttctattgttcgacagcaagatctacctg 676
               ||| ||||||| |||||| |||  | || |||||||| ||||||||
Sbjct: 5720906 gctccaaaagaacaatctgctaagggtcaacagcaaggtctacctg 5720861



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                                 
Query: 118     ctgctcgacctgctgccccagatccacgccctcttctccgaccagctccg 167
               |||||||||||| | ||||||||||||||||||||| |||| | ||||||
Sbjct: 5723005 ctgctcgacctgattccccagatccacgccctcttcgccgatccgctccg 5722956



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                 
Query: 320     gtgtaaaactcacttcaggccctaaccttgaaga 353
               ||||||||||||||||||||| ||| ||||||||
Sbjct: 5734891 gtgtaaaactcacttcaggccataaacttgaaga 5734858



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                      
Query: 115     gcgctgctcgacctgctgccccagatccacgccctcttc 153
               ||||||||||||||| | ||||| |||||| ||||||||
Sbjct: 5741014 gcgctgctcgacctgatcccccaaatccactccctcttc 5740976
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>dbj|AP001551.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0451C06
          Length = 151773

 Score =  248 bits (125), Expect = 2e-62
 Identities = 143/149 (95%)
 Strand = Plus / Minus

                                                                         
Query: 366   atttaaaggttcttgttcagttcaggtttacagtatccaggcttgtattccaaaagatac 425
             |||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 46108 atttaaagattcttgttcagttcaagtgtacagtatccaggcttgtattccaaaagatac 46049

                                                                         
Query: 426   tgctgtactttggaatcctgaatttgtgcaggcagaggagcttttcaaccagccatttga 485
             ||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||
Sbjct: 46048 tgctgtactttggaatcctgaatttgtacaggcagaggagctttttaaccggccatttga 45989

                                          
Query: 486   tgaagaaaattgtttgagagataataggt 514
             |||||||||||||||||||||||||||||
Sbjct: 45988 tgaagaaaattgtttgagagataataggt 45960



 Score =  125 bits (63), Expect = 2e-25
 Identities = 111/127 (87%)
 Strand = Plus / Minus

                                                                         
Query: 226   aggttgcttcaggagtttgtcaacaaacatggaactgatcacgaagttatttacagtgtg 285
             ||||||||||||||||| ||||||||||||||  ||||||   |||| ||||||||||||
Sbjct: 46369 aggttgcttcaggagttcgtcaacaaacatggggctgatcttaaagtgatttacagtgtg 46310

                                                                         
Query: 286   tctgggtggttaaagaacaatcccgagaactattgtgtaaaactcacttcaggccctaac 345
             ||||| ||||||||||| || |||   || ||||||||||||||||||||||||| ||| 
Sbjct: 46309 tctggatggttaaagaagaaccccacaaattattgtgtaaaactcacttcaggccataaa 46250

                    
Query: 346   cttgaag 352
             |||||||
Sbjct: 46249 cttgaag 46243



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 133/166 (80%)
 Strand = Plus / Minus

                                                                         
Query: 511   aggttctgtggtgtaaggaattcttttgtcaagcgaactaccacagggaagcatgtaagc 570
             ||||| ||||||||   |||||||||||||||||||||| | |  ||||||| ||| || 
Sbjct: 45728 aggttttgtggtgttttgaattcttttgtcaagcgaactgctaatgggaagcttgtgagt 45669

                                                                         
Query: 571   tcaatgcccccaaagcctacaaatagtgttatagcacctgcagtgccaaaacctagtagt 630
             ||| | || |||||||||| ||||||||||   ||| |||||  |   ||| ||||||||
Sbjct: 45668 tcatttccgccaaagcctataaatagtgttgctgcagctgcaccgttgaaaactagtagt 45609

                                                           
Query: 631   gctacaaaagagcaatcttctattgttcgacagcaagatctacctg 676
             ||| ||||||| |||||| |||  | || |||||||| ||||||||
Sbjct: 45608 gctccaaaagaacaatctgctaagggtcaacagcaaggtctacctg 45563



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                               
Query: 118   ctgctcgacctgctgccccagatccacgccctcttctccgaccagctccg 167
             |||||||||||| | ||||||||||||||||||||| |||| | ||||||
Sbjct: 47707 ctgctcgacctgattccccagatccacgccctcttcgccgatccgctccg 47658



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                               
Query: 320   gtgtaaaactcacttcaggccctaaccttgaaga 353
             ||||||||||||||||||||| ||| ||||||||
Sbjct: 59593 gtgtaaaactcacttcaggccataaacttgaaga 59560



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                    
Query: 115   gcgctgctcgacctgctgccccagatccacgccctcttc 153
             ||||||||||||||| | ||||| |||||| ||||||||
Sbjct: 65716 gcgctgctcgacctgatcccccaaatccactccctcttc 65678
to top
>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29
          Length = 295150

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 102  gatggccgacggcgcgctgctc 123
            ||||||||||||||||||||||
Sbjct: 6805 gatggccgacggcgcgctgctc 6826
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 147      cctcttctccgaccagctccgc 168
                ||||||||||||||||||||||
Sbjct: 27128812 cctcttctccgaccagctccgc 27128791
to top
>dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1725_H08
          Length = 155431

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 147   cctcttctccgaccagctccgc 168
             ||||||||||||||||||||||
Sbjct: 25261 cctcttctccgaccagctccgc 25240
to top
>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1486_E07
          Length = 110494

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 147    cctcttctccgaccagctccgc 168
              ||||||||||||||||||||||
Sbjct: 100461 cctcttctccgaccagctccgc 100440
to top
>dbj|AK109748.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-F05, full
           insert sequence
          Length = 2462

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 147 cctcttctccgaccagctccgc 168
           ||||||||||||||||||||||
Sbjct: 391 cctcttctccgaccagctccgc 412
to top
>dbj|AK073500.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044J15, full
           insert sequence
          Length = 1255

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 147 cctcttctccgaccagctccgc 168
           ||||||||||||||||||||||
Sbjct: 333 cctcttctccgaccagctccgc 354
to top
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 108     cgacggcgcgctgctcgacctgctgc 133
               ||||| ||||||||||||||||||||
Sbjct: 2076410 cgacgacgcgctgctcgacctgctgc 2076385
to top
>gb|BT017703.1| Zea mays clone EL01N0445G07.c mRNA sequence
          Length = 1208

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 148 ctcttctccgaccagctccgc 168
           |||||||||||||||||||||
Sbjct: 317 ctcttctccgaccagctccgc 337
to top
>gb|AC131079.11| Mus musculus chromosome 14, clone RP23-434L17, complete sequence
          Length = 203276

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 294    gttaaagaacaatcccgagaa 314
              |||||||||||||||||||||
Sbjct: 127515 gttaaagaacaatcccgagaa 127495
to top
>gb|AC132329.4| Mus musculus BAC clone RP24-206F15 from chromosome 18, complete
             sequence
          Length = 142250

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 478   ccatttgatgaagaaaattgtttga 502
             ||||||| |||||||||||||||||
Sbjct: 17399 ccatttgttgaagaaaattgtttga 17423
to top
>gb|AC123951.3| Mus musculus BAC clone RP23-166M23 from 18, complete sequence
          Length = 220088

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 478    ccatttgatgaagaaaattgtttga 502
              ||||||| |||||||||||||||||
Sbjct: 197524 ccatttgttgaagaaaattgtttga 197548
to top
>gb|AC020666.8| Oryza sativa chromosome 10 BAC OSJNBa0082M15 genomic sequence, complete
              sequence
          Length = 158550

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 239    agtttgtcaacaaacatggaa 259
              |||||||||||||||||||||
Sbjct: 104727 agtttgtcaacaaacatggaa 104707
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 239      agtttgtcaacaaacatggaa 259
                |||||||||||||||||||||
Sbjct: 20959664 agtttgtcaacaaacatggaa 20959684
to top
>gb|AC013472.8| Homo sapiens BAC clone RP11-503P10 from 2, complete sequence
          Length = 149481

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 481   tttgatgaagaaaattgtttgagag 505
             ||||||||| |||||||||||||||
Sbjct: 96369 tttgatgaacaaaattgtttgagag 96345
to top
>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome
          Length = 3031430

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 368    ttaaaggttcttgttcagttc 388
              |||||||||||||||||||||
Sbjct: 371701 ttaaaggttcttgttcagttc 371721
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 239      agtttgtcaacaaacatggaa 259
                |||||||||||||||||||||
Sbjct: 20970928 agtttgtcaacaaacatggaa 20970948
to top
>ref|NM_100040.2| Arabidopsis thaliana ferric-chelate reductase/ oxidoreductase
           AT1G01580 mRNA, complete cds
          Length = 2409

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 4   ccacactcctcccttcgtct 23
           ||||||||||||||||||||
Sbjct: 339 ccacactcctcccttcgtct 320
to top
>gb|DP000013.1| Otolemur garnettii target 1 genomic scaffold
          Length = 1743090

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 9       ctcctcccttcgtcttcccc 28
               ||||||||||||||||||||
Sbjct: 1472558 ctcctcccttcgtcttcccc 1472539
to top
>ref|XM_388693.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08517.1)
           partial mRNA
          Length = 984

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 581 caaagcctacaaatagtgtt 600
           ||||||||||||||||||||
Sbjct: 752 caaagcctacaaatagtgtt 771
to top
>gb|AE014314.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 11
             of 11 of the complete sequence
          Length = 249198

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 487   gaagaaaattgtttgagaga 506
             ||||||||||||||||||||
Sbjct: 10664 gaagaaaattgtttgagaga 10683
to top
>emb|Z97055.1|HS388M5 Human DNA sequence from clone RP3-388M5 on chromosome 22, complete
             sequence
          Length = 177568

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 450   tgtgcaggcagaggagcttt 469
             ||||||||||||||||||||
Sbjct: 91723 tgtgcaggcagaggagcttt 91704
to top
>emb|AL732618.6| Human DNA sequence from clone RP11-25L19 on chromosome 1, complete
             sequence
          Length = 95333

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 607   cctgcagtgccaaaacctag 626
             ||||||||||||||||||||
Sbjct: 43739 cctgcagtgccaaaacctag 43758
to top
>emb|AL162733.9| Human DNA sequence from clone RP11-397F23 on chromosome 9 Contains the
             5'end of the protein tyrosine phosphatase (non-receptor
             type 3) gene, a novel pseudogene, apseudogene similar to
             mouse Ybox transcription factor and a CpG island, complete
             sequence
          Length = 189367

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 133   ccccagatccacgccctcttctcc 156
             |||||||||| |||||||||||||
Sbjct: 62445 ccccagatcctcgccctcttctcc 62468
to top
>emb|AL159982.17| Human DNA sequence from clone RP11-94P17 on chromosome 13 Contains the
             3' end of a novel gene (FLJ25324) and a novel gene,
             complete sequence
          Length = 162414

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 487   gaagaaaattgtttgagaga 506
             ||||||||||||||||||||
Sbjct: 60917 gaagaaaattgtttgagaga 60936
to top
>gb|AY302057.1| Arabidopsis thaliana ferric-chelate reductase (FRO2) mRNA, complete
           cds
          Length = 2178

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 4   ccacactcctcccttcgtct 23
           ||||||||||||||||||||
Sbjct: 339 ccacactcctcccttcgtct 320
to top
>gb|AC026199.6| Homo sapiens chromosome 3 clone RP11-507D6 map 3p, complete sequence
          Length = 201531

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 490    gaaaattgtttgagagataa 509
              ||||||||||||||||||||
Sbjct: 121933 gaaaattgtttgagagataa 121952
to top
>gb|DQ067263.1| Kocuria rosea maltooligosyl trehalose synthase (treY) gene, partial
           cds
          Length = 2100

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 103 atggccgacggcgcgctgct 122
           ||||||||||||||||||||
Sbjct: 733 atggccgacggcgcgctgct 752
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 229      ttgcttcaggagtttgtcaacaaa 252
                ||||||||||||||||||| ||||
Sbjct: 28825557 ttgcttcaggagtttgtcaccaaa 28825580
to top
>gb|AF074705.2|AF074705 Pseudomonas aeruginosa dihydroaeruginoic acid synthetase (pchE),
            pyochelin synthetase (pchF), reductase (pchG), ABC
            transporter (pchH), and ABC transporter (pchI) genes,
            complete cds
          Length = 15023

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 114  cgcgctgctcgacctgctgc 133
            ||||||||||||||||||||
Sbjct: 2961 cgcgctgctcgacctgctgc 2980
to top
>gb|AC026217.3|AC026217 Homo sapiens chromosome 3 clone RP11-812I2 map 3p, complete sequence
          Length = 193372

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 490    gaaaattgtttgagagataa 509
              ||||||||||||||||||||
Sbjct: 101578 gaaaattgtttgagagataa 101559
to top
>gb|AC026200.4|AC026200 Homo sapiens chromosome 3 clone RP11-534J21 map 3p, complete sequence
          Length = 188379

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 490   gaaaattgtttgagagataa 509
             ||||||||||||||||||||
Sbjct: 48346 gaaaattgtttgagagataa 48365
to top
>gb|AC069247.5|AC069247 Homo sapiens chromosome 3 clone RP11-489O22 map 3p, complete sequence
          Length = 180234

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 490  gaaaattgtttgagagataa 509
            ||||||||||||||||||||
Sbjct: 9083 gaaaattgtttgagagataa 9064
to top
>gb|AE004839.1| Pseudomonas aeruginosa PAO1, section 400 of 529 of the complete genome
          Length = 17071

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 114   cgcgctgctcgacctgctgc 133
             ||||||||||||||||||||
Sbjct: 14789 cgcgctgctcgacctgctgc 14770
to top
>gb|AC006431.9| Homo sapiens 12 BAC RP11-451H11 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 126552

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 452  tgcaggcagaggagcttttc 471
            ||||||||||||||||||||
Sbjct: 7117 tgcaggcagaggagcttttc 7098
to top
>gb|AY086007.1| Arabidopsis thaliana clone 205976 mRNA, complete sequence
          Length = 1721

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 178 tacaaatggctaagccggaatttttctgtgtcatcaaatgatgccaagaggttgct 233
           ||||||||||| || || ||||| ||  | |||||||||  |||||||||||||||
Sbjct: 134 tacaaatggctgagtcgaaatttctcgctttcatcaaatactgccaagaggttgct 189
to top
>gb|AC061957.3|F22L4 Sequence of BAC F22L4 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 66131

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     ccacactcctcccttcgtct 23
             ||||||||||||||||||||
Sbjct: 47078 ccacactcctcccttcgtct 47059
to top
>gb|AC146656.3| Otolemur garnettii clone CH256-389C8, complete sequence
          Length = 185109

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 9      ctcctcccttcgtcttcccc 28
              ||||||||||||||||||||
Sbjct: 112242 ctcctcccttcgtcttcccc 112223
to top
>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome
          Length = 3630528

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 478    ccatttgatgaagaaaattg 497
              ||||||||||||||||||||
Sbjct: 144241 ccatttgatgaagaaaattg 144260
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 105     ggccgacggcgcgctgctcgacct 128
               |||||||||||||||| |||||||
Sbjct: 8958384 ggccgacggcgcgctgatcgacct 8958361
to top
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0028E05
          Length = 157631

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 229    ttgcttcaggagtttgtcaacaaa 252
              ||||||||||||||||||| ||||
Sbjct: 133332 ttgcttcaggagtttgtcaccaaa 133355
to top
>dbj|AP005931.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
           PAC clone:P0545E05
          Length = 163229

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 229 ttgcttcaggagtttgtcaacaaa 252
           ||||||||||||||||||| ||||
Sbjct: 643 ttgcttcaggagtttgtcaccaaa 666
to top
>emb|Y09581.1|ATFROHABG Arabidopsis thaliana FRO1 and FRO2 genes
          Length = 15202

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 4    ccacactcctcccttcgtct 23
            ||||||||||||||||||||
Sbjct: 1782 ccacactcctcccttcgtct 1763
to top
>gb|AF184621.1|AF184621 Pseudomonas aeruginosa pyochelin synthetase PchE (pchE) gene,
            complete cds
          Length = 4317

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 114  cgcgctgctcgacctgctgc 133
            ||||||||||||||||||||
Sbjct: 2157 cgcgctgctcgacctgctgc 2176
to top
>dbj|AK071637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023101G03, full
           insert sequence
          Length = 1283

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 229 ttgcttcaggagtttgtcaacaaa 252
           ||||||||||||||||||| ||||
Sbjct: 710 ttgcttcaggagtttgtcaccaaa 687
to top
>gb|AC149068.4| Mus musculus BAC clone RP23-7G19 from 18, complete sequence
          Length = 232071

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    caagggttctacaaccttcc 74
             ||||||||||||||||||||
Sbjct: 88637 caagggttctacaaccttcc 88618
to top
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 129     gctgccccagatccacgccc 148
               ||||||||||||||||||||
Sbjct: 3804305 gctgccccagatccacgccc 3804286
to top
>gb|AC147634.3| Mus musculus BAC clone RP23-305G22 from 10, complete sequence
          Length = 207157

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 490    gaaaattgtttgagagataa 509
              ||||||||||||||||||||
Sbjct: 104400 gaaaattgtttgagagataa 104381


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,110,155
Number of Sequences: 3902068
Number of extensions: 6110155
Number of successful extensions: 114491
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 113907
Number of HSP's gapped (non-prelim): 580
length of query: 679
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 656
effective length of database: 17,143,297,704
effective search space: 11246003293824
effective search space used: 11246003293824
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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