Clone Name	bags9f04
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mR...	1112	0.0
2	gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mR...	1112	0.0
3	gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA	946	0.0
4	gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5...	880	0.0
5	gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form...	773	0.0
6	gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha for...	726	0.0
7	dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clon...	531	e-148
8	dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ...	523	e-145
9	dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clon...	523	e-145
10	dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clon...	523	e-145
11	dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clon...	523	e-145
12	dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clon...	523	e-145
13	dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase s...	523	e-145
14	dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase l...	523	e-145
15	gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carb...	511	e-142
16	gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carbo...	494	e-136
17	gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome...	476	e-131
18	gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome...	476	e-131
19	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	476	e-131
20	gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...	476	e-131
21	gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA...	462	e-127
22	gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase ...	460	e-126
23	gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase ...	460	e-126
24	gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate c...	456	e-125
25	gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase ...	452	e-124
26	gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase ...	452	e-124
27	gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/ox...	398	e-108
28	gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/ox...	394	e-106
29	gb|AY110044.1| Zea mays CL1146_1 mRNA sequence	359	7e-96
30	ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	351	2e-93
31	ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	351	2e-93
32	ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	351	2e-93
33	gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890)...	351	2e-93
34	gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, comp...	351	2e-93
35	gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, compl...	351	2e-93
36	gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730...	351	2e-93
37	gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map ...	347	3e-92
38	gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphospha...	347	3e-92
39	gb|BT000613.1| Arabidopsis thaliana Rubsico activase (At2g39730...	343	4e-91
40	gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, compl...	343	4e-91
41	gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete se...	343	4e-91
42	gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carb...	339	7e-90
43	gb|AY312576.1| Larrea tridentata Rubisco activase beta form prec...	331	2e-87
44	gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosph...	331	2e-87
45	gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosph...	325	1e-85
46	gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, c...	317	2e-83
47	gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate ca...	317	2e-83
48	gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence	301	1e-78
49	gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 gen...	301	1e-78
50	gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 gen...	301	1e-78
51	gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 gen...	301	1e-78
52	gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 gen...	301	1e-78
53	gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 gen...	301	1e-78
54	gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 gen...	301	1e-78
55	gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 gen...	301	1e-78
56	gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 gen...	301	1e-78
57	gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 gen...	301	1e-78
58	gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 gen...	293	3e-76
59	gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 gen...	293	3e-76
60	gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 gen...	293	3e-76
61	gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 gen...	293	3e-76
62	gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 gen...	293	3e-76
63	gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genom...	293	3e-76
64	emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate car...	274	3e-70
65	gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate...	268	2e-68
66	emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase	244	3e-61
67	gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds	236	7e-59
68	gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, part...	232	1e-57
69	gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1...	232	1e-57
70	gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/...	230	4e-57
71	gb|AY312575.1| Larrea tridentata Rubisco activase alpha form pre...	228	2e-56
72	gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA...	228	2e-56
73	gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precur...	226	7e-56
74	emb|Y10657.1|CLRCAGENE C.littorale rca gene	218	2e-53
75	gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precur...	206	6e-50
76	emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphat...	186	6e-44
77	gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bi...	182	9e-43
78	gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate car...	176	6e-41
79	gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase m...	170	3e-39
80	emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphospha...	167	5e-38
81	gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precurso...	161	3e-36
82	emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putat...	147	5e-32
83	gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence	143	8e-31
84	gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence	133	8e-28
85	gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) ...	123	7e-25
86	gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete s...	119	1e-23
87	emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosph...	117	4e-23
88	emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase	105	2e-19
89	gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome	92	3e-15
90	emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubis...	88	4e-14
91	gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete se...	68	4e-08
92	gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete se...	68	4e-08
93	gb|AY845069.1| Olea europaea clone SRAP-12 SRAP marker genomic s...	68	4e-08
94	ref|NM_105969.1| Arabidopsis thaliana ATP binding / ATPase AT1G7...	56	1e-04
95	gb|AY078044.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, com...	56	1e-04
96	gb|AF361834.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, com...	56	1e-04
97	emb|BX815704.1|CNS0AARM Arabidopsis thaliana Full-length cDNA Co...	56	1e-04
98	dbj|AK118942.1| Arabidopsis thaliana At1g73110 mRNA for unknown ...	56	1e-04
99	gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N...	56	1e-04
100	emb|BX813694.1|CNS0ADV2 Arabidopsis thaliana Full-length cDNA Co...	54	6e-04
101	gb|AY273869.1| Pseudomonas aeruginosa PA14 pathogenicity island ...	44	0.54
102	emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genom...	42	2.1
103	emb|BX818441.1|CNS0ACQX Arabidopsis thaliana Full-length cDNA Co...	42	2.1
104	gb|AC002511.1| Homo sapiens chromosome 19 clone PC28130, complet...	40	8.4
105	emb|Z73941.1|LJRAB7B L.japonicus mRNA for small GTP-binding prot...	40	8.4
106	gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome	40	8.4
107	ref|NM_076469.4| Caenorhabditis elegans Amyloid Precursor-Like f...	40	8.4
108	ref|NM_076470.2| Caenorhabditis elegans Amyloid Precursor-Like f...	40	8.4
109	gb|U56966.2| Caenorhabditis elegans cosmid C42D8, complete sequence	40	8.4
110	gb|U00240.1|U00240 Caenorhabditis elegans beta-amyloid protein p...	40	8.4
111	emb|AL627188.18| Mouse DNA sequence from clone RP23-113G7 on chr...	40	8.4

---

>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds
          Length = 1709

 Score = 1112 bits (561), Expect = 0.0
 Identities = 608/617 (98%), Gaps = 5/617 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
            |||||||||||||||||||| ||||||||||||||||||||| ||||||||||| || ||
Sbjct: 635  gtgagcttgtgttcgccaag-atgggcatcaaccccatcatg-atgagtgccgg-ag-ag 690

                                                                        
Query: 61   ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691  ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 750

                                                                        
Query: 121  gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751  gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 810

                                                                        
Query: 181  gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811  gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 870

                                                                        
Query: 241  ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |
Sbjct: 871  ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaagagg 930

                                                                        
Query: 301  gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 931  gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 990

                                                                        
Query: 361  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 991  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 1050

                                                                        
Query: 421  ggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatc 480
            |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 1051 ggtgtctgcaagggtatcttccagaccgacaatgtctgtgacgagtctgtcgtaaagatc 1110

                                                                        
Query: 481  gtcgacaccttcccaggacaatccattgactttttcggtgcttctgcgtgctcgggtgta 540
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1111 gtcgacaccttcccaggacaatccattgactttttcggtgc-tctgcgtgctcgggtgta 1169

                                                                        
Query: 541  cgacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaacattggcaagaggct 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1170 cgacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaacattggcaagaggct 1229

                             
Query: 601  ggtgaactcgcgggacg 617
            |||||||||||||||||
Sbjct: 1230 ggtgaactcgcgggacg 1246

---

>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end
          Length = 1394

 Score = 1112 bits (561), Expect = 0.0
 Identities = 608/617 (98%), Gaps = 5/617 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
           |||||||||||||||||||| ||||||||||||||||||||| ||||||||||| || ||
Sbjct: 380 gtgagcttgtgttcgccaag-atgggcatcaaccccatcatg-atgagtgccgg-ag-ag 435

                                                                       
Query: 61  ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 495

                                                                       
Query: 121 gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 555

                                                                       
Query: 181 gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 615

                                                                       
Query: 241 ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |
Sbjct: 616 ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaagagg 675

                                                                       
Query: 301 gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 735

                                                                       
Query: 361 ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 795

                                                                       
Query: 421 ggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatc 480
           |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 796 ggtgtctgcaagggtatcttccagaccgacaatgtctgtgacgagtctgtcgtaaagatc 855

                                                                       
Query: 481 gtcgacaccttcccaggacaatccattgactttttcggtgcttctgcgtgctcgggtgta 540
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 856 gtcgacaccttcccaggacaatccattgactttttcggtgc-tctgcgtgctcgggtgta 914

                                                                       
Query: 541 cgacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaacattggcaagaggct 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 915 cgacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaacattggcaagaggct 974

                            
Query: 601 ggtgaactcgcgggacg 617
           |||||||||||||||||
Sbjct: 975 ggtgaactcgcgggacg 991

---

>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA
          Length = 1643

 Score =  946 bits (477), Expect = 0.0
 Identities = 587/617 (95%), Gaps = 5/617 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
            |||||||||| ||||||||| |||||||||||||| |||||| ||||||||||| || ||
Sbjct: 555  gtgagcttgtcttcgccaag-atgggcatcaacccaatcatg-atgagtgccgg-ag-ag 610

                                                                        
Query: 61   ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
            ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611  ctggagagtggcaacgccggagagccagccaagctcatcaggcagcggtaccgtgaggct 670

                                                                        
Query: 121  gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 180
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 671  gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgccggt 730

                                                                        
Query: 181  gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
            ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 731  gcgggtaggatgggcgggaccacacagtacaccgtcaacaaccagatggtgaacgccacc 790

                                                                        
Query: 241  ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
            || |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 791  ctcatgaacatcgccgatgcccccaccaatgtgcagctcccaggcatgtacaacaaggag 850

                                                                        
Query: 301  gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
            |||||||| |||||||||||||||||||| |||||||||||||||||| | ||||| |||
Sbjct: 851  gagaacccacgtgtgcccatcgtcgtcactggtaacgatttctcgacgttgtacgcccct 910

                                                                        
Query: 361  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 911  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgcgacgaccgtatc 970

                                                                        
Query: 421  ggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatc 480
            |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 971  ggtgtctgcaagggtatcttccagaccgacaatgtcagcgacgagtccgtcgtcaagatc 1030

                                                                        
Query: 481  gtcgacaccttcccaggacaatccattgactttttcggtgcttctgcgtgctcgggtgta 540
            |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 1031 gtcgacaccttcccaggacaatccatcgactttttcggtgc-tctgcgtgctcgggtgta 1089

                                                                        
Query: 541  cgacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaacattggcaagaggct 600
            |||||| |||||||||||||||||   ||||||||| ||||||||||||||||||| |||
Sbjct: 1090 cgacgacgaggtgcgcaagtgggtgacctctaccggtatcgagaacattggcaagaagct 1149

                             
Query: 601  ggtgaactcgcgggacg 617
            |||||||||||||||||
Sbjct: 1150 ggtgaactcgcgggacg 1166

---

>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase
            activase (RcaB) gene, complete cds; and ribulose
            1,5-bisphosphate carboxylase activase  (RcaA) gene,
            alternatively spliced, complete cds
          Length = 8766

 Score =  880 bits (444), Expect = 0.0
 Identities = 471/476 (98%), Gaps = 3/476 (0%)
 Strand = Plus / Plus

                                                                        
Query: 33   ccccatcatgnatgagtgccggnagnagctggagagtgggaacgctggagagccagccaa 92
            |||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 6408 ccccatcatg-atgagtgccgg-ag-agctggagagtgggaacgctggagagccagccaa 6464

                                                                        
Query: 93   gctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctg 152
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6465 gctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctg 6524

                                                                        
Query: 153  cctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 212
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6525 cctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 6584

                                                                        
Query: 213  cgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgt 272
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6585 cgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgt 6644

                                                                        
Query: 273  gcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccgg 332
            |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||
Sbjct: 6645 gcagctccctggcatgtacaacaagagggagaacccccgtgtgcccatcgtcgtcaccgg 6704

                                                                        
Query: 333  taacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttcta 392
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6705 taacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttcta 6764

                                                                        
Query: 393  ctgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaa 452
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6765 ctgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaa 6824

                                                                    
Query: 453  tgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattg 508
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6825 tgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattg 6880



 Score =  462 bits (233), Expect = e-127
 Identities = 488/568 (85%), Gaps = 8/568 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
            ||||||| |||||||||||| ||||||||||||||||||||| ||||| |||||    ||
Sbjct: 3253 gtgagctggtgttcgccaag-atgggcatcaaccccatcatg-atgagcgccggt--gag 3308

                                                                        
Query: 61   ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
            |||||||| || ||||   | ||||| |||||||| ||| ||||| ||||||| ||||| 
Sbjct: 3309 ctggagagcggcaacg---gcgagccggccaagctgatccggcagaggtaccgcgaggcg 3365

                                                                        
Query: 121  gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 180
            || ||||| ||||| ||||| |||||||||||||||||||||||||| || ||||| || 
Sbjct: 3366 gccgacattatcaacaagggcaagatgtgctgcctcttcatcaacgacctggacgccggc 3425

                                                                        
Query: 181  gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
            |||||  |||||||||| || ||||||||||| || ||||||||||||||||||||||||
Sbjct: 3426 gcgggccggatgggcgggacgacgcagtacacggtgaacaaccagatggtgaacgccacc 3485

                                                                        
Query: 241  ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
            |||||||||||||| || || |||||||||||||||||||| || |||||||||||||||
Sbjct: 3486 ctgatgaacatcgcggacgcgcccaccaacgtgcagctcccggggatgtacaacaaggag 3545

                                                                        
Query: 301  gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
            ||||||||||| ||||||||| |||||||||| ||||| ||||||||||| |||||||| 
Sbjct: 3546 gagaacccccgcgtgcccatcatcgtcaccggcaacgacttctcgacgctgtacgctccc 3605

                                                                        
Query: 361  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
            ||||||||||| || || |||||||||||||||||||| |||||||| || ||||| |||
Sbjct: 3606 ctgatccgtgacgggcgcatggagaagttctactgggcgcccacccgcgaggaccgcatc 3665

                                                                        
Query: 421  ggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatc 480
            || || |||||||| |||||||  |||||||| |||   |||||| | || || | | | 
Sbjct: 3666 ggcgtgtgcaagggcatcttccgcaccgacaacgtcccggacgaggccgtggtgaggctg 3725

                                                                        
Query: 481  gtcgacaccttcccaggacaatccattgactttttcggtgcttctgcgtgctcgggtgta 540
            || ||||||||||| || || ||||| ||||| ||||| ||  ||||| || ||||||||
Sbjct: 3726 gtggacaccttcccggggcagtccatcgacttcttcggcgc-gctgcgggcacgggtgta 3784

                                        
Query: 541  cgacgatgaggtgcgcaagtgggtcggc 568
            |||||| |||||||||||||||||||||
Sbjct: 3785 cgacgacgaggtgcgcaagtgggtcggc 3812



 Score =  202 bits (102), Expect = 1e-48
 Identities = 109/110 (99%), Gaps = 1/110 (0%)
 Strand = Plus / Plus

                                                                        
Query: 508  gactttttcggtgcttctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcgg 567
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7021 gactttttcggtgct-ctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcgg 7079

                                                              
Query: 568  ctctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacg 617
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7080 ctctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacg 7129



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 31/32 (96%), Gaps = 1/32 (3%)
 Strand = Plus / Plus

                                            
Query: 1    gtgagcttgtgttcgccaagnatgggcatcaa 32
            |||||||||||||||||||| |||||||||||
Sbjct: 6127 gtgagcttgtgttcgccaag-atgggcatcaa 6157

---

>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1646

 Score =  773 bits (390), Expect = 0.0
 Identities = 565/617 (91%), Gaps = 5/617 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
            |||||||||| ||||||||| |||||||||||||| |||||| ||||||||||| || ||
Sbjct: 566  gtgagcttgtcttcgccaag-atgggcatcaacccaatcatg-atgagtgccgg-ag-ag 621

                                                                        
Query: 61   ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
            |||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||||| 
Sbjct: 622  ctggagagcggcaacgccggagagccagccaagctcatcaggcagcggtaccgcgaggcc 681

                                                                        
Query: 121  gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 180
            |||||||||||||||||||| |||||||||||||||||||||||||| || ||||| || 
Sbjct: 682  gcagacatgatcaagaagggcaagatgtgctgcctcttcatcaacgacctcgacgccggc 741

                                                                        
Query: 181  gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
            |||||| |||||||||| ||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 742  gcgggtcggatgggcgggaccacccagtacaccgtgaacaaccagatggtgaacgccacc 801

                                                                        
Query: 241  ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
            ||||||||||||||||| || |||||||||||||||||||| || |||||||||||||||
Sbjct: 802  ctgatgaacatcgccgacgcgcccaccaacgtgcagctcccggggatgtacaacaaggag 861

                                                                        
Query: 301  gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
            |||||||||||||| |||||| |||||||||| ||||| ||||||||||| ||||| || 
Sbjct: 862  gagaacccccgtgtccccatcatcgtcaccggcaacgacttctcgacgctgtacgcgccc 921

                                                                        
Query: 361  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
            || |||||||| |||||||||||||||||||||||||| |||||||| || |||||||||
Sbjct: 922  ctcatccgtgacggtcgtatggagaagttctactgggcgcccacccgcgaggaccgtatc 981

                                                                        
Query: 421  ggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatc 480
            || ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 982  ggcgtctgcaagggtatcttccagaccgacaacgtcagcgacgagtctgtcgtcaagatc 1041

                                                                        
Query: 481  gtcgacaccttcccaggacaatccattgactttttcggtgcttctgcgtgctcgggtgta 540
            |||||||| ||||||||||| ||||| ||||| |||||||| ||||||||||||||||||
Sbjct: 1042 gtcgacacnttcccaggacagtccatcgacttcttcggtgc-tctgcgtgctcgggtgta 1100

                                                                        
Query: 541  cgacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaacattggcaagaggct 600
            ||||| ||||||||||||||||||    || |||||||| |||||||| |||||||||||
Sbjct: 1101 cgacgttgaggtgcgcaagtgggtgtcgtccaccggaattgagaacatcggcaagaggct 1160

                             
Query: 601  ggtgaactcgcgggacg 617
            |||||||||||||||||
Sbjct: 1161 ggtgaactcgcgggacg 1177

---

>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1616

 Score =  726 bits (366), Expect = 0.0
 Identities = 559/617 (90%), Gaps = 5/617 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
            |||||||||| ||||||||| |||||||||||||| |||||| ||||||||||| || ||
Sbjct: 576  gtgagcttgtcttcgccaag-atgggcatcaacccaatcatg-atgagtgccgg-ag-ag 631

                                                                        
Query: 61   ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
            |||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||||| 
Sbjct: 632  ctggagagcggcaacgccggagagccagccaagctcatcaggcagcggtaccgcgaggcc 691

                                                                        
Query: 121  gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 180
            |||||||||||||||||||| |||||||||||||||||||||||||| || ||||| || 
Sbjct: 692  gcagacatgatcaagaagggcaagatgtgctgcctcttcatcaacgacctcgacgccggc 751

                                                                        
Query: 181  gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
            |||||| |||||||||| ||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 752  gcgggtcggatgggcgggaccacccagtacaccgtgaacaaccagatggtgaacgccacc 811

                                                                        
Query: 241  ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
            ||||||||||||||||| || ||||||||||||||||| || || |||||||||||||||
Sbjct: 812  ctgatgaacatcgccgacgcgcccaccaacgtgcagcttccggggatgtacaacaaggag 871

                                                                        
Query: 301  gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
            |||||||||||||| |||||  | |||||||| ||||| || |||||||| ||||| || 
Sbjct: 872  gagaacccccgtgttcccattatngtcaccggcaacgacttttcgacgctgtacgccccc 931

                                                                        
Query: 361  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
            || || | ||| ||||||||||||||||| |||||||| |||||||| || |||||||||
Sbjct: 932  cttattcctgacggtcgtatggagaagttttactgggcgcccacccgcgaggaccgtatc 991

                                                                        
Query: 421  ggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatc 480
            || ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 992  ggcgtctgcaagggtatcttccagaccgacaacgtcagcgacgagtctgtcgtcaagatc 1051

                                                                        
Query: 481  gtcgacaccttcccaggacaatccattgactttttcggtgcttctgcgtgctcgggtgta 540
            |||||||||||||||||||| ||||| ||||| |||||||| ||||||||||||||||||
Sbjct: 1052 gtcgacaccttcccaggacagtccatcgacttcttcggtgc-tctgcgtgctcgggtgta 1110

                                                                        
Query: 541  cgacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaacattggcaagaggct 600
            |||||| |||||||||||||||||    || |||||||| |||||||| |||||||||||
Sbjct: 1111 cgacgacgaggtgcgcaagtgggtgtcgtccaccggaattgagaacatcggcaagaggct 1170

                             
Query: 601  ggtgaactcgcgggacg 617
            |||||||||||||||||
Sbjct: 1171 ggtgaactcgcgggacg 1187

---

>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full
            insert sequence
          Length = 1691

 Score =  531 bits (268), Expect = e-148
 Identities = 495/564 (87%), Gaps = 5/564 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
            ||||||| || ||||||||| ||||| ||||||||||||||| ||||| ||||| || ||
Sbjct: 559  gtgagctcgtcttcgccaag-atggggatcaaccccatcatg-atgagcgccgg-ag-ag 614

                                                                        
Query: 61   ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
            |||||||| || ||||| |||||||| || ||||| ||||||||||||||||||||||| 
Sbjct: 615  ctggagagcggcaacgccggagagccggcgaagctgatcaggcagcggtaccgtgaggcg 674

                                                                        
Query: 121  gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 180
            |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| |||
Sbjct: 675  gcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacgatctggacgcgggt 734

                                                                        
Query: 181  gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
            || ||| | ||||| || ||||| |||||||| || ||||||||||||||||||||||||
Sbjct: 735  gcaggtcgcatgggaggcaccacccagtacacggtgaacaaccagatggtgaacgccacc 794

                                                                        
Query: 241  ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
            |||||||||||||||||   ||| |||||||||||||||||||| |||||||||||||||
Sbjct: 795  ctgatgaacatcgccgacaacccaaccaacgtgcagctccctgggatgtacaacaaggag 854

                                                                        
Query: 301  gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
            || ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| || 
Sbjct: 855  gacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcgccg 914

                                                                        
Query: 361  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
            || |||||||| || |||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 915  ctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgtgtc 974

                                                                        
Query: 421  ggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatc 480
            || |||||||||||||||||||  |||||||| |||   ||||||    |||||||||||
Sbjct: 975  ggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaagatc 1034

                                                                        
Query: 481  gtcgacaccttcccaggacaatccattgactttttcggtgcttctgcgtgctcgggtgta 540
            ||||||| ||||||||| |||||||| || || ||||| || ||| ||||| || || ||
Sbjct: 1035 gtcgacagcttcccaggccaatccatcgatttcttcggcgc-tcttcgtgcccgtgttta 1093

                                    
Query: 541  cgacgatgaggtgcgcaagtgggt 564
            |||||| |||||||||||||||||
Sbjct: 1094 cgacgacgaggtgcgcaagtgggt 1117



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                               
Query: 581  gagaacattggcaagaggctggtgaactcgcggga 615
            |||||||||||||||||||||||||||||| ||||
Sbjct: 1134 gagaacattggcaagaggctggtgaactcgaggga 1168

---

>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate
            carboxylase activase large isoform precursor protein,
            complete cds, clone: 13YPR038
          Length = 1558

 Score =  523 bits (264), Expect = e-145
 Identities = 494/564 (87%), Gaps = 5/564 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
            ||||||| || ||||||||| ||||| ||||||||||||||| ||||| ||||| || ||
Sbjct: 523  gtgagctcgtcttcgccaag-atggggatcaaccccatcatg-atgagcgccgg-ag-ag 578

                                                                        
Query: 61   ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
            |||||||| || ||||| |||||||| || ||||| ||||||||||||||||||||||| 
Sbjct: 579  ctggagagcggcaacgccggagagccggcgaagctgatcaggcagcggtaccgtgaggcg 638

                                                                        
Query: 121  gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 180
            |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| |||
Sbjct: 639  gcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacgatctggacgcgggt 698

                                                                        
Query: 181  gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
            || ||| | ||||| || ||||| |||||||| || ||||||||||||||||||||||||
Sbjct: 699  gcaggtcgcatgggaggcaccacccagtacacggtgaacaaccagatggtgaacgccacc 758

                                                                        
Query: 241  ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
            |||||||||||||||||   ||| ||||||||||||||||| || |||||||||||||||
Sbjct: 759  ctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggatgtacaacaaggag 818

                                                                        
Query: 301  gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
            || ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| || 
Sbjct: 819  gacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcgccg 878

                                                                        
Query: 361  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
            || |||||||| || |||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 879  ctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgtgtc 938

                                                                        
Query: 421  ggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatc 480
            || |||||||||||||||||||  |||||||| |||   ||||||    |||||||||||
Sbjct: 939  ggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaagatc 998

                                                                        
Query: 481  gtcgacaccttcccaggacaatccattgactttttcggtgcttctgcgtgctcgggtgta 540
            ||||||| ||||||||| |||||||| || || ||||| || ||| ||||| || || ||
Sbjct: 999  gtcgacagcttcccaggccaatccatcgatttcttcggcgc-tcttcgtgcccgtgttta 1057

                                    
Query: 541  cgacgatgaggtgcgcaagtgggt 564
            |||||| |||||||||||||||||
Sbjct: 1058 cgacgacgaggtgcgcaagtgggt 1081



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                               
Query: 581  gagaacattggcaagaggctggtgaactcgcggga 615
            |||||||||||||||||||||||||||||| ||||
Sbjct: 1098 gagaacattggcaagaggctggtgaactcgaggga 1132

---

>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full
            insert sequence
          Length = 1721

 Score =  523 bits (264), Expect = e-145
 Identities = 494/564 (87%), Gaps = 5/564 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
            ||||||| || ||||||||| ||||| ||||||||||||||| ||||| ||||| || ||
Sbjct: 571  gtgagctcgtcttcgccaag-atggggatcaaccccatcatg-atgagcgccgg-ag-ag 626

                                                                        
Query: 61   ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
            |||||||| || ||||| |||||||| || ||||| ||||||||||||||||||||||| 
Sbjct: 627  ctggagagcggcaacgccggagagccggcgaagctgatcaggcagcggtaccgtgaggcg 686

                                                                        
Query: 121  gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 180
            |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| |||
Sbjct: 687  gcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacgatctggacgcgggt 746

                                                                        
Query: 181  gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
            || ||| | ||||| || ||||| |||||||| || ||||||||||||||||||||||||
Sbjct: 747  gcaggtcgcatgggaggcaccacccagtacacggtgaacaaccagatggtgaacgccacc 806

                                                                        
Query: 241  ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
            |||||||||||||||||   ||| ||||||||||||||||| || |||||||||||||||
Sbjct: 807  ctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggatgtacaacaaggag 866

                                                                        
Query: 301  gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
            || ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| || 
Sbjct: 867  gacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcgccg 926

                                                                        
Query: 361  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
            || |||||||| || |||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 927  ctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgtgtc 986

                                                                        
Query: 421  ggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatc 480
            || |||||||||||||||||||  |||||||| |||   ||||||    |||||||||||
Sbjct: 987  ggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaagatc 1046

                                                                        
Query: 481  gtcgacaccttcccaggacaatccattgactttttcggtgcttctgcgtgctcgggtgta 540
            ||||||| ||||||||| |||||||| || || ||||| || ||| ||||| || || ||
Sbjct: 1047 gtcgacagcttcccaggccaatccatcgatttcttcggcgc-tcttcgtgcccgtgttta 1105

                                    
Query: 541  cgacgatgaggtgcgcaagtgggt 564
            |||||| |||||||||||||||||
Sbjct: 1106 cgacgacgaggtgcgcaagtgggt 1129



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                               
Query: 581  gagaacattggcaagaggctggtgaactcgcggga 615
            |||||||||||||||||||||||||||||| ||||
Sbjct: 1146 gagaacattggcaagaggctggtgaactcgaggga 1180

---

>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full
            insert sequence
          Length = 1682

 Score =  523 bits (264), Expect = e-145
 Identities = 494/564 (87%), Gaps = 5/564 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
            ||||||| || ||||||||| ||||| ||||||||||||||| ||||| ||||| || ||
Sbjct: 522  gtgagctcgtcttcgccaag-atggggatcaaccccatcatg-atgagcgccgg-ag-ag 577

                                                                        
Query: 61   ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
            |||||||| || ||||| |||||||| || ||||| ||||||||||||||||||||||| 
Sbjct: 578  ctggagagcggcaacgccggagagccggcgaagctgatcaggcagcggtaccgtgaggcg 637

                                                                        
Query: 121  gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 180
            |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| |||
Sbjct: 638  gcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacgatctggacgcgggt 697

                                                                        
Query: 181  gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
            || ||| | ||||| || ||||| |||||||| || ||||||||||||||||||||||||
Sbjct: 698  gcaggtcgcatgggaggcaccacccagtacacggtgaacaaccagatggtgaacgccacc 757

                                                                        
Query: 241  ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
            |||||||||||||||||   ||| ||||||||||||||||| || |||||||||||||||
Sbjct: 758  ctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggatgtacaacaaggag 817

                                                                        
Query: 301  gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
            || ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| || 
Sbjct: 818  gacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcgccg 877

                                                                        
Query: 361  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
            || |||||||| || |||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 878  ctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgtgtc 937

                                                                        
Query: 421  ggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatc 480
            || |||||||||||||||||||  |||||||| |||   ||||||    |||||||||||
Sbjct: 938  ggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaagatc 997

                                                                        
Query: 481  gtcgacaccttcccaggacaatccattgactttttcggtgcttctgcgtgctcgggtgta 540
            ||||||| ||||||||| |||||||| || || ||||| || ||| ||||| || || ||
Sbjct: 998  gtcgacagcttcccaggccaatccatcgatttcttcggcgc-tcttcgtgcccgtgttta 1056

                                    
Query: 541  cgacgatgaggtgcgcaagtgggt 564
            |||||| |||||||||||||||||
Sbjct: 1057 cgacgacgaggtgcgcaagtgggt 1080



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                               
Query: 581  gagaacattggcaagaggctggtgaactcgcggga 615
            |||||||||||||||||||||||||||||| ||||
Sbjct: 1097 gagaacattggcaagaggctggtgaactcgaggga 1131

---

>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full
            insert sequence
          Length = 1680

 Score =  523 bits (264), Expect = e-145
 Identities = 494/564 (87%), Gaps = 5/564 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
            ||||||| || ||||||||| ||||| ||||||||||||||| ||||| ||||| || ||
Sbjct: 560  gtgagctcgtcttcgccaag-atggggatcaaccccatcatg-atgagcgccgg-ag-ag 615

                                                                        
Query: 61   ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
            |||||||| || ||||| |||||||| || ||||| ||||||||||||||||||||||| 
Sbjct: 616  ctggagagcggcaacgccggagagccggcgaagctgatcaggcagcggtaccgtgaggcg 675

                                                                        
Query: 121  gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 180
            |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| |||
Sbjct: 676  gcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacgatctggacgcgggt 735

                                                                        
Query: 181  gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
            || ||| | ||||| || ||||| |||||||| || ||||||||||||||||||||||||
Sbjct: 736  gcaggtcgcatgggaggcaccacccagtacacggtgaacaaccagatggtgaacgccacc 795

                                                                        
Query: 241  ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
            |||||||||||||||||   ||| ||||||||||||||||| || |||||||||||||||
Sbjct: 796  ctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggatgtacaacaaggag 855

                                                                        
Query: 301  gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
            || ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| || 
Sbjct: 856  gacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcgccg 915

                                                                        
Query: 361  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
            || |||||||| || |||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 916  ctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgtgtc 975

                                                                        
Query: 421  ggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatc 480
            || |||||||||||||||||||  |||||||| |||   ||||||    |||||||||||
Sbjct: 976  ggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaagatc 1035

                                                                        
Query: 481  gtcgacaccttcccaggacaatccattgactttttcggtgcttctgcgtgctcgggtgta 540
            ||||||| ||||||||| |||||||| || || ||||| || ||| ||||| || || ||
Sbjct: 1036 gtcgacagcttcccaggccaatccatcgatttcttcggcgc-tcttcgtgcccgtgttta 1094

                                    
Query: 541  cgacgatgaggtgcgcaagtgggt 564
            |||||| |||||||||||||||||
Sbjct: 1095 cgacgacgaggtgcgcaagtgggt 1118



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                               
Query: 581  gagaacattggcaagaggctggtgaactcgcggga 615
            |||||||||||||||||||||||||||||| ||||
Sbjct: 1135 gagaacattggcaagaggctggtgaactcgaggga 1169

---

>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full
           insert sequence
          Length = 1470

 Score =  523 bits (264), Expect = e-145
 Identities = 494/564 (87%), Gaps = 5/564 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
           ||||||| || ||||||||| ||||| ||||||||||||||| ||||| ||||| || ||
Sbjct: 343 gtgagctcgtcttcgccaag-atggggatcaaccccatcatg-atgagcgccgg-ag-ag 398

                                                                       
Query: 61  ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
           |||||||| || ||||| |||||||| || ||||| ||||||||||||||||||||||| 
Sbjct: 399 ctggagagcggcaacgccggagagccggcgaagctgatcaggcagcggtaccgtgaggcg 458

                                                                       
Query: 121 gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 180
           |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| |||
Sbjct: 459 gcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacgatctggacgcgggt 518

                                                                       
Query: 181 gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
           || ||| | ||||| || ||||| |||||||| || ||||||||||||||||||||||||
Sbjct: 519 gcaggtcgcatgggaggcaccacccagtacacggtgaacaaccagatggtgaacgccacc 578

                                                                       
Query: 241 ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
           |||||||||||||||||   ||| ||||||||||||||||| || |||||||||||||||
Sbjct: 579 ctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggatgtacaacaaggag 638

                                                                       
Query: 301 gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
           || ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| || 
Sbjct: 639 gacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcgccg 698

                                                                       
Query: 361 ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
           || |||||||| || |||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 699 ctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgtgtc 758

                                                                       
Query: 421 ggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatc 480
           || |||||||||||||||||||  |||||||| |||   ||||||    |||||||||||
Sbjct: 759 ggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaagatc 818

                                                                       
Query: 481 gtcgacaccttcccaggacaatccattgactttttcggtgcttctgcgtgctcgggtgta 540
           ||||||| ||||||||| |||||||| || || ||||| || ||| ||||| || || ||
Sbjct: 819 gtcgacagcttcccaggccaatccatcgatttcttcggcgc-tcttcgtgcccgtgttta 877

                                   
Query: 541 cgacgatgaggtgcgcaagtgggt 564
           |||||| |||||||||||||||||
Sbjct: 878 cgacgacgaggtgcgcaagtgggt 901



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                              
Query: 581 gagaacattggcaagaggctggtgaactcgcggga 615
           |||||||||||||||||||||||||||||| ||||
Sbjct: 918 gagaacattggcaagaggctggtgaactcgaggga 952

---

>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform
            precursor, complete cds
          Length = 1706

 Score =  523 bits (264), Expect = e-145
 Identities = 494/564 (87%), Gaps = 5/564 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
            ||||||| || ||||||||| ||||| ||||||||||||||| ||||| ||||| || ||
Sbjct: 564  gtgagctcgtcttcgccaag-atggggatcaaccccatcatg-atgagcgccgg-ag-ag 619

                                                                        
Query: 61   ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
            |||||||| || ||||| |||||||| || ||||| ||||||||||||||||||||||| 
Sbjct: 620  ctggagagcggcaacgccggagagccggcgaagctgatcaggcagcggtaccgtgaggcg 679

                                                                        
Query: 121  gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 180
            |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| |||
Sbjct: 680  gcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacgatctggacgcgggt 739

                                                                        
Query: 181  gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
            || ||| | ||||| || ||||| |||||||| || ||||||||||||||||||||||||
Sbjct: 740  gcaggtcgcatgggaggcaccacccagtacacggtgaacaaccagatggtgaacgccacc 799

                                                                        
Query: 241  ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
            |||||||||||||||||   ||| ||||||||||||||||| || |||||||||||||||
Sbjct: 800  ctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggatgtacaacaaggag 859

                                                                        
Query: 301  gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
            || ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| || 
Sbjct: 860  gacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcgccg 919

                                                                        
Query: 361  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
            || |||||||| || |||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 920  ctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgtgtc 979

                                                                        
Query: 421  ggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatc 480
            || |||||||||||||||||||  |||||||| |||   ||||||    |||||||||||
Sbjct: 980  ggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaagatc 1039

                                                                        
Query: 481  gtcgacaccttcccaggacaatccattgactttttcggtgcttctgcgtgctcgggtgta 540
            ||||||| ||||||||| |||||||| || || ||||| || ||| ||||| || || ||
Sbjct: 1040 gtcgacagcttcccaggccaatccatcgatttcttcggcgc-tcttcgtgcccgtgttta 1098

                                    
Query: 541  cgacgatgaggtgcgcaagtgggt 564
            |||||| |||||||||||||||||
Sbjct: 1099 cgacgacgaggtgcgcaagtgggt 1122



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                               
Query: 581  gagaacattggcaagaggctggtgaactcgcggga 615
            |||||||||||||||||||||||||||||| ||||
Sbjct: 1139 gagaacattggcaagaggctggtgaactcgaggga 1173

---

>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform
            precursor, complete cds
          Length = 1623

 Score =  523 bits (264), Expect = e-145
 Identities = 494/564 (87%), Gaps = 5/564 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
            ||||||| || ||||||||| ||||| ||||||||||||||| ||||| ||||| || ||
Sbjct: 558  gtgagctcgtcttcgccaag-atggggatcaaccccatcatg-atgagcgccgg-ag-ag 613

                                                                        
Query: 61   ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
            |||||||| || ||||| |||||||| || ||||| ||||||||||||||||||||||| 
Sbjct: 614  ctggagagcggcaacgccggagagccggcgaagctgatcaggcagcggtaccgtgaggcg 673

                                                                        
Query: 121  gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 180
            |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| |||
Sbjct: 674  gcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacgatctggacgcgggt 733

                                                                        
Query: 181  gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
            || ||| | ||||| || ||||| |||||||| || ||||||||||||||||||||||||
Sbjct: 734  gcaggtcgcatgggaggcaccacccagtacacggtgaacaaccagatggtgaacgccacc 793

                                                                        
Query: 241  ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
            |||||||||||||||||   ||| ||||||||||||||||| || |||||||||||||||
Sbjct: 794  ctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggatgtacaacaaggag 853

                                                                        
Query: 301  gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
            || ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| || 
Sbjct: 854  gacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcgccg 913

                                                                        
Query: 361  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
            || |||||||| || |||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 914  ctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgtgtc 973

                                                                        
Query: 421  ggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatc 480
            || |||||||||||||||||||  |||||||| |||   ||||||    |||||||||||
Sbjct: 974  ggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaagatc 1033

                                                                        
Query: 481  gtcgacaccttcccaggacaatccattgactttttcggtgcttctgcgtgctcgggtgta 540
            ||||||| ||||||||| |||||||| || || ||||| || ||| ||||| || || ||
Sbjct: 1034 gtcgacagcttcccaggccaatccatcgatttcttcggcgc-tcttcgtgcccgtgttta 1092

                                    
Query: 541  cgacgatgaggtgcgcaagtgggt 564
            |||||| |||||||||||||||||
Sbjct: 1093 cgacgacgaggtgcgcaagtgggt 1116



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                               
Query: 581  gagaacattggcaagaggctggtgaactcgcggga 615
            |||||||||||||||||||||||||||||| ||||
Sbjct: 1133 gagaacattggcaagaggctggtgaactcgaggga 1167

---

>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            (rca) mRNA, complete cds
          Length = 1675

 Score =  511 bits (258), Expect = e-142
 Identities = 493/564 (87%), Gaps = 8/564 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
            ||||||| || ||||||||| ||||| ||||||||||||||| ||||| ||||| || ||
Sbjct: 531  gtgagctcgtcttcgccaag-atggggatcaaccccatcatg-atgagcgccgg-ag-ag 586

                                                                        
Query: 61   ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
            |||||||| || ||||   ||||||| |||||||| ||||||||||||||||||||||| 
Sbjct: 587  ctggagagcggcaacg---gagagccggccaagctgatcaggcagcggtaccgtgaggcg 643

                                                                        
Query: 121  gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 180
            |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| |||
Sbjct: 644  gcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacgatctggacgcgggt 703

                                                                        
Query: 181  gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
            || ||| | ||||| || ||||| |||||||| || ||||||||||||||||||||||||
Sbjct: 704  gcaggtcgcatgggaggcaccacccagtacacggtgaacaaccagatggtgaacgccacc 763

                                                                        
Query: 241  ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
            |||||||||||||||||   ||| ||||||||||||||||| || |||||||||||||||
Sbjct: 764  ctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggatgtacaacaaggag 823

                                                                        
Query: 301  gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
            || ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| || 
Sbjct: 824  gacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcgccg 883

                                                                        
Query: 361  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
            || |||||||| || |||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 884  ctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgtgtc 943

                                                                        
Query: 421  ggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatc 480
            || |||||||||||||||||||  |||||||| |||   ||||||    |||||||||||
Sbjct: 944  ggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaagatc 1003

                                                                        
Query: 481  gtcgacaccttcccaggacaatccattgactttttcggtgcttctgcgtgctcgggtgta 540
            ||||||| ||||||||| |||||||| || || ||||| || ||| ||||| || || ||
Sbjct: 1004 gtcgacagcttcccaggccaatccatcgatttcttcggcgc-tcttcgtgcccgtgttta 1062

                                    
Query: 541  cgacgatgaggtgcgcaagtgggt 564
            |||||| |||||||||||||||||
Sbjct: 1063 cgacgacgaggtgcgcaagtgggt 1086



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                               
Query: 581  gagaacattggcaagaggctggtgaactcgcggga 615
            |||||||||||||||||||||||||||||| ||||
Sbjct: 1103 gagaacattggcaagaggctggtgaactcgaggga 1137

---

>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase
           precursor RNA, partial cds; nuclear gene for chloroplast
           product
          Length = 850

 Score =  494 bits (249), Expect = e-136
 Identities = 301/317 (94%), Gaps = 1/317 (0%)
 Strand = Plus / Plus

                                                                       
Query: 301 gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
           |||||||| |||||||||||||||||||| |||||||||||||||||| | ||||| |||
Sbjct: 1   gagaacccacgtgtgcccatcgtcgtcactggtaacgatttctcgacgttgtacgcccct 60

                                                                       
Query: 361 ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 61  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgcgacgaccgtatc 120

                                                                       
Query: 421 ggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatc 480
           |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 121 ggtgtctgcaagggtatcttccagaccgacaatgtcagcgacgagtccgtcgtcaagatc 180

                                                                       
Query: 481 gtcgacaccttcccaggacaatccattgactttttcggtgcttctgcgtgctcgggtgta 540
           |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 181 gtcgacaccttcccaggacaatccatcgactttttcggtgc-tctgcgtgctcgggtgta 239

                                                                       
Query: 541 cgacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaacattggcaagaggct 600
           |||||| |||||||||||||||||   ||||||||| ||||||||||||||||||| |||
Sbjct: 240 cgacgacgaggtgcgcaagtgggtgacctctaccggtatcgagaacattggcaagaagct 299

                            
Query: 601 ggtgaactcgcgggacg 617
           |||||||||||||||||
Sbjct: 300 ggtgaactcgcgggacg 316

---

>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04
              map S10003, complete sequence
          Length = 119238

 Score =  476 bits (240), Expect = e-131
 Identities = 396/448 (88%)
 Strand = Plus / Minus

                                                                          
Query: 59     agctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgagg 118
              |||||||||| || ||||| |||||||| || ||||| ||||||||||||||||||||||
Sbjct: 109135 agctggagagcggcaacgccggagagccggcgaagctgatcaggcagcggtaccgtgagg 109076

                                                                          
Query: 119    ctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctg 178
              | |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 109075 cggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacgatctggacgcgg 109016

                                                                          
Query: 179    gtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcca 238
              |||| ||| | ||||| || ||||| |||||||| || ||||||||||||||||||||||
Sbjct: 109015 gtgcaggtcgcatgggaggcaccacccagtacacggtgaacaaccagatggtgaacgcca 108956

                                                                          
Query: 239    ccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaagg 298
              |||||||||||||||||||   ||| ||||||||||||||||| || |||||||||||||
Sbjct: 108955 ccctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggatgtacaacaagg 108896

                                                                          
Query: 299    aggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctc 358
              |||| ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| |
Sbjct: 108895 aggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcgc 108836

                                                                          
Query: 359    ctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgta 418
              | || |||||||| || |||||||||||||||||||||||||||||||| ||||||||| 
Sbjct: 108835 cgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgtg 108776

                                                                          
Query: 419    tcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaaga 478
              |||| |||||||||||||||||||  |||||||| |||   ||||||    |||||||||
Sbjct: 108775 tcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaaga 108716

                                          
Query: 479    tcgtcgacaccttcccaggacaatccat 506
              ||||||||| ||||||||| ||||||||
Sbjct: 108715 tcgtcgacagcttcccaggccaatccat 108688



 Score =  109 bits (55), Expect = 1e-20
 Identities = 91/103 (88%)
 Strand = Plus / Minus

                                                                          
Query: 192    gggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacat 251
              |||||| || ||||||||||| || |||||||||||||||||||| || |||||||||||
Sbjct: 112679 gggcggcacgacgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacat 112620

                                                         
Query: 252    cgccgatgcccccaccaacgtgcagctccctggcatgtacaac 294
              ||| ||   ||||||||||||||||||||| || |||||||||
Sbjct: 112619 cgcggacaaccccaccaacgtgcagctcccagggatgtacaac 112577



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                          
Query: 79     ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 138
              |||||||| || ||||| ||| ||||||||||||| ||||| || ||||||||||| |||
Sbjct: 112778 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaacaag 112719

                                                    
Query: 139    ggtaagatgtgctgcctcttcatcaacgatcttgacgc 176
              || |||||||||   || ||||||||||| || |||||
Sbjct: 112718 gggaagatgtgcgtgctgttcatcaacgacctggacgc 112681



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                                 
Query: 581    gagaacattggcaagaggctggtgaactcgcggga 615
              |||||||||||||||||||||||||||||| ||||
Sbjct: 108522 gagaacattggcaagaggctggtgaactcgaggga 108488



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                          
Query: 379    atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 438
              ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| |||
Sbjct: 112519 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 112460

                  
Query: 439    ttcc 442
              ||||
Sbjct: 112459 ttcc 112456



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 539    tacgacgatgaggtgcgcaagtgggt 564
              |||||||| |||||||||||||||||
Sbjct: 108564 tacgacgacgaggtgcgcaagtgggt 108539



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 581    gagaacattggcaagaggctggtgaactc 609
              |||||||| |||| |||||||||||||||
Sbjct: 112352 gagaacatcggcaggaggctggtgaactc 112324

---

>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0026K20 map S10559, complete sequence
          Length = 115996

 Score =  476 bits (240), Expect = e-131
 Identities = 396/448 (88%)
 Strand = Plus / Minus

                                                                         
Query: 59    agctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgagg 118
             |||||||||| || ||||| |||||||| || ||||| ||||||||||||||||||||||
Sbjct: 31012 agctggagagcggcaacgccggagagccggcgaagctgatcaggcagcggtaccgtgagg 30953

                                                                         
Query: 119   ctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctg 178
             | |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 30952 cggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacgatctggacgcgg 30893

                                                                         
Query: 179   gtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcca 238
             |||| ||| | ||||| || ||||| |||||||| || ||||||||||||||||||||||
Sbjct: 30892 gtgcaggtcgcatgggaggcaccacccagtacacggtgaacaaccagatggtgaacgcca 30833

                                                                         
Query: 239   ccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaagg 298
             |||||||||||||||||||   ||| ||||||||||||||||| || |||||||||||||
Sbjct: 30832 ccctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggatgtacaacaagg 30773

                                                                         
Query: 299   aggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctc 358
             |||| ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| |
Sbjct: 30772 aggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcgc 30713

                                                                         
Query: 359   ctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgta 418
             | || |||||||| || |||||||||||||||||||||||||||||||| ||||||||| 
Sbjct: 30712 cgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgtg 30653

                                                                         
Query: 419   tcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaaga 478
             |||| |||||||||||||||||||  |||||||| |||   ||||||    |||||||||
Sbjct: 30652 tcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaaga 30593

                                         
Query: 479   tcgtcgacaccttcccaggacaatccat 506
             ||||||||| ||||||||| ||||||||
Sbjct: 30592 tcgtcgacagcttcccaggccaatccat 30565



 Score =  109 bits (55), Expect = 1e-20
 Identities = 91/103 (88%)
 Strand = Plus / Minus

                                                                         
Query: 192   gggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacat 251
             |||||| || ||||||||||| || |||||||||||||||||||| || |||||||||||
Sbjct: 34556 gggcggcacgacgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacat 34497

                                                        
Query: 252   cgccgatgcccccaccaacgtgcagctccctggcatgtacaac 294
             ||| ||   ||||||||||||||||||||| || |||||||||
Sbjct: 34496 cgcggacaaccccaccaacgtgcagctcccagggatgtacaac 34454



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                         
Query: 79    ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 138
             |||||||| || ||||| ||| ||||||||||||| ||||| || ||||||||||| |||
Sbjct: 34655 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaacaag 34596

                                                   
Query: 139   ggtaagatgtgctgcctcttcatcaacgatcttgacgc 176
             || |||||||||   || ||||||||||| || |||||
Sbjct: 34595 gggaagatgtgcgtgctgttcatcaacgacctggacgc 34558



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                                
Query: 581   gagaacattggcaagaggctggtgaactcgcggga 615
             |||||||||||||||||||||||||||||| ||||
Sbjct: 30399 gagaacattggcaagaggctggtgaactcgaggga 30365



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                         
Query: 379   atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 438
             ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| |||
Sbjct: 34396 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 34337

                 
Query: 439   ttcc 442
             ||||
Sbjct: 34336 ttcc 34333



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 539   tacgacgatgaggtgcgcaagtgggt 564
             |||||||| |||||||||||||||||
Sbjct: 30441 tacgacgacgaggtgcgcaagtgggt 30416



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 581   gagaacattggcaagaggctggtgaactc 609
             |||||||| |||| |||||||||||||||
Sbjct: 34229 gagaacatcggcaggaggctggtgaactc 34201

---

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  476 bits (240), Expect = e-131
 Identities = 396/448 (88%)
 Strand = Plus / Minus

                                                                            
Query: 59       agctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgagg 118
                |||||||||| || ||||| |||||||| || ||||| ||||||||||||||||||||||
Sbjct: 28304274 agctggagagcggcaacgccggagagccggcgaagctgatcaggcagcggtaccgtgagg 28304215

                                                                            
Query: 119      ctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctg 178
                | |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 28304214 cggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacgatctggacgcgg 28304155

                                                                            
Query: 179      gtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcca 238
                |||| ||| | ||||| || ||||| |||||||| || ||||||||||||||||||||||
Sbjct: 28304154 gtgcaggtcgcatgggaggcaccacccagtacacggtgaacaaccagatggtgaacgcca 28304095

                                                                            
Query: 239      ccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaagg 298
                |||||||||||||||||||   ||| ||||||||||||||||| || |||||||||||||
Sbjct: 28304094 ccctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggatgtacaacaagg 28304035

                                                                            
Query: 299      aggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctc 358
                |||| ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| |
Sbjct: 28304034 aggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcgc 28303975

                                                                            
Query: 359      ctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgta 418
                | || |||||||| || |||||||||||||||||||||||||||||||| ||||||||| 
Sbjct: 28303974 cgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgtg 28303915

                                                                            
Query: 419      tcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaaga 478
                |||| |||||||||||||||||||  |||||||| |||   ||||||    |||||||||
Sbjct: 28303914 tcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaaga 28303855

                                            
Query: 479      tcgtcgacaccttcccaggacaatccat 506
                ||||||||| ||||||||| ||||||||
Sbjct: 28303854 tcgtcgacagcttcccaggccaatccat 28303827



 Score =  109 bits (55), Expect = 1e-20
 Identities = 91/103 (88%)
 Strand = Plus / Minus

                                                                            
Query: 192      gggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacat 251
                |||||| || ||||||||||| || |||||||||||||||||||| || |||||||||||
Sbjct: 28307818 gggcggcacgacgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacat 28307759

                                                           
Query: 252      cgccgatgcccccaccaacgtgcagctccctggcatgtacaac 294
                ||| ||   ||||||||||||||||||||| || |||||||||
Sbjct: 28307758 cgcggacaaccccaccaacgtgcagctcccagggatgtacaac 28307716



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                            
Query: 79       ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 138
                |||||||| || ||||| ||| ||||||||||||| ||||| || ||||||||||| |||
Sbjct: 28307917 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaacaag 28307858

                                                      
Query: 139      ggtaagatgtgctgcctcttcatcaacgatcttgacgc 176
                || |||||||||   || ||||||||||| || |||||
Sbjct: 28307857 gggaagatgtgcgtgctgttcatcaacgacctggacgc 28307820



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                                   
Query: 581      gagaacattggcaagaggctggtgaactcgcggga 615
                |||||||||||||||||||||||||||||| ||||
Sbjct: 28303661 gagaacattggcaagaggctggtgaactcgaggga 28303627



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                            
Query: 379      atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 438
                ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| |||
Sbjct: 28307658 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 28307599

                    
Query: 439      ttcc 442
                ||||
Sbjct: 28307598 ttcc 28307595



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 539      tacgacgatgaggtgcgcaagtgggt 564
                |||||||| |||||||||||||||||
Sbjct: 28303703 tacgacgacgaggtgcgcaagtgggt 28303678



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 581      gagaacattggcaagaggctggtgaactc 609
                |||||||| |||| |||||||||||||||
Sbjct: 28307491 gagaacatcggcaggaggctggtgaactc 28307463

---

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  476 bits (240), Expect = e-131
 Identities = 396/448 (88%)
 Strand = Plus / Minus

                                                                            
Query: 59       agctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgagg 118
                |||||||||| || ||||| |||||||| || ||||| ||||||||||||||||||||||
Sbjct: 28286723 agctggagagcggcaacgccggagagccggcgaagctgatcaggcagcggtaccgtgagg 28286664

                                                                            
Query: 119      ctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctg 178
                | |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 28286663 cggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacgatctggacgcgg 28286604

                                                                            
Query: 179      gtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcca 238
                |||| ||| | ||||| || ||||| |||||||| || ||||||||||||||||||||||
Sbjct: 28286603 gtgcaggtcgcatgggaggcaccacccagtacacggtgaacaaccagatggtgaacgcca 28286544

                                                                            
Query: 239      ccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaagg 298
                |||||||||||||||||||   ||| ||||||||||||||||| || |||||||||||||
Sbjct: 28286543 ccctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggatgtacaacaagg 28286484

                                                                            
Query: 299      aggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctc 358
                |||| ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| |
Sbjct: 28286483 aggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcgc 28286424

                                                                            
Query: 359      ctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgta 418
                | || |||||||| || |||||||||||||||||||||||||||||||| ||||||||| 
Sbjct: 28286423 cgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgtg 28286364

                                                                            
Query: 419      tcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaaga 478
                |||| |||||||||||||||||||  |||||||| |||   ||||||    |||||||||
Sbjct: 28286363 tcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaaga 28286304

                                            
Query: 479      tcgtcgacaccttcccaggacaatccat 506
                ||||||||| ||||||||| ||||||||
Sbjct: 28286303 tcgtcgacagcttcccaggccaatccat 28286276



 Score =  109 bits (55), Expect = 1e-20
 Identities = 91/103 (88%)
 Strand = Plus / Minus

                                                                            
Query: 192      gggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacat 251
                |||||| || ||||||||||| || |||||||||||||||||||| || |||||||||||
Sbjct: 28290267 gggcggcacgacgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacat 28290208

                                                           
Query: 252      cgccgatgcccccaccaacgtgcagctccctggcatgtacaac 294
                ||| ||   ||||||||||||||||||||| || |||||||||
Sbjct: 28290207 cgcggacaaccccaccaacgtgcagctcccagggatgtacaac 28290165



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                            
Query: 79       ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 138
                |||||||| || ||||| ||| ||||||||||||| ||||| || ||||||||||| |||
Sbjct: 28290366 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaacaag 28290307

                                                      
Query: 139      ggtaagatgtgctgcctcttcatcaacgatcttgacgc 176
                || |||||||||   || ||||||||||| || |||||
Sbjct: 28290306 gggaagatgtgcgtgctgttcatcaacgacctggacgc 28290269



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                                   
Query: 581      gagaacattggcaagaggctggtgaactcgcggga 615
                |||||||||||||||||||||||||||||| ||||
Sbjct: 28286110 gagaacattggcaagaggctggtgaactcgaggga 28286076



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                            
Query: 379      atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 438
                ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| |||
Sbjct: 28290107 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 28290048

                    
Query: 439      ttcc 442
                ||||
Sbjct: 28290047 ttcc 28290044



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 539      tacgacgatgaggtgcgcaagtgggt 564
                |||||||| |||||||||||||||||
Sbjct: 28286152 tacgacgacgaggtgcgcaagtgggt 28286127



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 581      gagaacattggcaagaggctggtgaactc 609
                |||||||| |||| |||||||||||||||
Sbjct: 28289940 gagaacatcggcaggaggctggtgaactc 28289912

---

>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds
          Length = 1656

 Score =  462 bits (233), Expect = e-127
 Identities = 488/568 (85%), Gaps = 8/568 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
            ||||||| |||||||||||| ||||||||||||||||||||| ||||| |||||    ||
Sbjct: 684  gtgagctggtgttcgccaag-atgggcatcaaccccatcatg-atgagcgccggt--gag 739

                                                                        
Query: 61   ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
            |||||||| || ||||   | ||||| |||||||| ||| ||||| ||||||| ||||| 
Sbjct: 740  ctggagagcggcaacg---gcgagccggccaagctgatccggcagaggtaccgcgaggcg 796

                                                                        
Query: 121  gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 180
            || ||||| ||||| ||||| |||||||||||||||||||||||||| || ||||| || 
Sbjct: 797  gccgacattatcaacaagggcaagatgtgctgcctcttcatcaacgacctggacgccggc 856

                                                                        
Query: 181  gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
            |||||  |||||||||| || ||||||||||| || ||||||||||||||||||||||||
Sbjct: 857  gcgggccggatgggcgggacgacgcagtacacggtgaacaaccagatggtgaacgccacc 916

                                                                        
Query: 241  ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
            |||||||||||||| || || |||||||||||||||||||| || |||||||||||||||
Sbjct: 917  ctgatgaacatcgcggacgcgcccaccaacgtgcagctcccggggatgtacaacaaggag 976

                                                                        
Query: 301  gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
            ||||||||||| ||||||||| |||||||||| ||||| ||||||||||| |||||||| 
Sbjct: 977  gagaacccccgcgtgcccatcatcgtcaccggcaacgacttctcgacgctgtacgctccc 1036

                                                                        
Query: 361  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
            ||||||||||| || || |||||||||||||||||||| |||||||| || ||||| |||
Sbjct: 1037 ctgatccgtgacgggcgcatggagaagttctactgggcgcccacccgcgaggaccgcatc 1096

                                                                        
Query: 421  ggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatc 480
            || || |||||||| |||||||  |||||||| |||   |||||| | || || | | | 
Sbjct: 1097 ggcgtgtgcaagggcatcttccgcaccgacaacgtcccggacgaggccgtggtgaggctg 1156

                                                                        
Query: 481  gtcgacaccttcccaggacaatccattgactttttcggtgcttctgcgtgctcgggtgta 540
            || ||||||||||| || || ||||| ||||| ||||| ||  ||||| || ||||||||
Sbjct: 1157 gtggacaccttcccggggcagtccatcgacttcttcggcgc-gctgcgggcacgggtgta 1215

                                        
Query: 541  cgacgatgaggtgcgcaagtgggtcggc 568
            |||||| |||||||||||||||||||||
Sbjct: 1216 cgacgacgaggtgcgcaagtgggtcggc 1243

---

>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds
          Length = 1436

 Score =  460 bits (232), Expect = e-126
 Identities = 451/521 (86%), Gaps = 4/521 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
           |||| ||||||||||||||| ||||| ||||||||||||||| ||||| |||||    ||
Sbjct: 217 gtgaacttgtgttcgccaag-atgggaatcaaccccatcatg-atgagcgccggt--gag 272

                                                                       
Query: 61  ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
           |||||||| || ||||| |||||||| || ||||| ||| ||||||||||||||||||| 
Sbjct: 273 ctggagagcggcaacgccggagagccggcgaagctgatccggcagcggtaccgtgaggcc 332

                                                                       
Query: 121 gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 180
           || ||||| |||| |||||| ||||||||||||||||||||||||||||| || || |||
Sbjct: 333 gccgacatcatcaggaaggggaagatgtgctgcctcttcatcaacgatctcgatgccggt 392

                                                                       
Query: 181 gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
           || ||  |||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 393 gccggccggatgggcggcaccacccagtacaccgtcaacaaccagatggtgaacgccacc 452

                                                                       
Query: 241 ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
           || ||||||||||||||   |||||||||||| |||||||| ||||||||||||||| ||
Sbjct: 453 ctcatgaacatcgccgacaaccccaccaacgtccagctccccggcatgtacaacaagcag 512

                                                                       
Query: 301 gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
           ||||||||||| ||||||||| |||||||||| ||||| ||||| || |||||||| || 
Sbjct: 513 gagaacccccgcgtgcccatcatcgtcaccggcaacgacttctccaccctctacgccccc 572

                                                                       
Query: 361 ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
           || |||||||| ||||||||||||||||||||||||||||||||| | || |||||  ||
Sbjct: 573 ctcatccgtgacggtcgtatggagaagttctactgggctcccaccagggatgaccgggtc 632

                                                                       
Query: 421 ggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatc 480
           || |||||||  |||||||||  | ||||||| |||    | |||  |||| ||||| ||
Sbjct: 633 ggcgtctgcaccggtatcttcaggtccgacaacgtccccaaggaggatgtcatcaagctc 692

                                                    
Query: 481 gtcgacaccttcccaggacaatccattgactttttcggtgc 521
           |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 693 gtcgacaccttccccggccaatccattgacttcttcggtgc 733



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 590 ggcaagaggctggtgaactcgc 611
           ||||||||||||||||||||||
Sbjct: 801 ggcaagaggctggtgaactcgc 822

---

>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds
          Length = 1597

 Score =  460 bits (232), Expect = e-126
 Identities = 451/521 (86%), Gaps = 4/521 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
           |||| ||||||||||||||| ||||| ||||||||||||||| ||||| |||||    ||
Sbjct: 411 gtgaacttgtgttcgccaag-atgggaatcaaccccatcatg-atgagcgccggt--gag 466

                                                                       
Query: 61  ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
           |||||||| || ||||| |||||||| || ||||| ||| ||||||||||||||||||| 
Sbjct: 467 ctggagagcggcaacgccggagagccggcgaagctgatccggcagcggtaccgtgaggcc 526

                                                                       
Query: 121 gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 180
           || ||||| |||| |||||| ||||||||||||||||||||||||||||| || || |||
Sbjct: 527 gccgacatcatcaggaaggggaagatgtgctgcctcttcatcaacgatctcgatgccggt 586

                                                                       
Query: 181 gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
           || ||  |||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 587 gccggccggatgggcggcaccacccagtacaccgtcaacaaccagatggtgaacgccacc 646

                                                                       
Query: 241 ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
           || ||||||||||||||   |||||||||||| |||||||| ||||||||||||||| ||
Sbjct: 647 ctcatgaacatcgccgacaaccccaccaacgtccagctccccggcatgtacaacaagcag 706

                                                                       
Query: 301 gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
           ||||||||||| ||||||||| |||||||||| ||||| ||||| || |||||||| || 
Sbjct: 707 gagaacccccgcgtgcccatcatcgtcaccggcaacgacttctccaccctctacgccccc 766

                                                                       
Query: 361 ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
           || |||||||| ||||||||||||||||||||||||||||||||| | || |||||  ||
Sbjct: 767 ctcatccgtgacggtcgtatggagaagttctactgggctcccaccagggatgaccgggtc 826

                                                                       
Query: 421 ggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatc 480
           || |||||||  |||||||||  | ||||||| |||    | |||  |||| ||||| ||
Sbjct: 827 ggcgtctgcaccggtatcttcaggtccgacaacgtccccaaggaggatgtcatcaagctc 886

                                                    
Query: 481 gtcgacaccttcccaggacaatccattgactttttcggtgc 521
           |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 887 gtcgacaccttccccggccaatccattgacttcttcggtgc 927



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 590  ggcaagaggctggtgaactcgc 611
            ||||||||||||||||||||||
Sbjct: 995  ggcaagaggctggtgaactcgc 1016

---

>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1525

 Score =  456 bits (230), Expect = e-125
 Identities = 487/566 (86%), Gaps = 5/566 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    gagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnagct 62
            ||||| |||||||||||| ||||||||||||||||||||| ||||| ||||| || ||||
Sbjct: 533  gagctggtgttcgccaag-atgggcatcaaccccatcatg-atgagcgccgg-ag-agct 588

                                                                        
Query: 63   ggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctgc 122
            |||||| || ||||| || ||||| |||||||| ||| ||||| ||||||| ||||||||
Sbjct: 589  ggagagcggcaacgccggcgagccggccaagctgatccggcagaggtaccgcgaggctgc 648

                                                                        
Query: 123  agacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgc 182
             ||||| ||||||||||| |||||||||||||||||||||||||| || ||||| || ||
Sbjct: 649  cgacattatcaagaagggcaagatgtgctgcctcttcatcaacgacctggacgccggcgc 708

                                                                        
Query: 183  gggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccct 242
            |||  |||||||||| || ||||||||||| || ||||||||||||||||||||||||||
Sbjct: 709  ggggcggatgggcgggacgacgcagtacacggtgaacaaccagatggtgaacgccaccct 768

                                                                        
Query: 243  gatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggagga 302
            |||||||||||| || || ||||||||||||||| |||| || |||||||||||||||||
Sbjct: 769  gatgaacatcgcggacgcgcccaccaacgtgcagttcccggggatgtacaacaaggagga 828

                                                                        
Query: 303  gaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctct 362
            |||||| || ||||||||| |||||||||| ||||| ||||||||||| ||||| || ||
Sbjct: 829  gaacccacgcgtgcccatcatcgtcaccggcaacgacttctcgacgctgtacgcgcccct 888

                                                                        
Query: 363  gatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcgg 422
             ||||| || || || |||||||||||||||||||| |||||||| || ||||| |||||
Sbjct: 889  catccgggacggccgcatggagaagttctactgggcgcccacccgggaggaccgcatcgg 948

                                                                        
Query: 423  tgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgt 482
             || |||||||| |||||||  |||||||| |||   |||||| | || || | | | ||
Sbjct: 949  cgtgtgcaagggcatcttccgcaccgacaacgtccccgacgaggccgtggtgaggctggt 1008

                                                                        
Query: 483  cgacaccttcccaggacaatccattgactttttcggtgcttctgcgtgctcgggtgtacg 542
             ||||||||||| || || ||||| ||||| ||||| ||  ||||| || ||||||||||
Sbjct: 1009 ggacaccttcccggggcagtccatcgacttcttcggcgc-gctgcgggcgcgggtgtacg 1067

                                      
Query: 543  acgatgaggtgcgcaagtgggtcggc 568
            |||| |||||||||||||||||||||
Sbjct: 1068 acgacgaggtgcgcaagtgggtcggc 1093

---

>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds
          Length = 1674

 Score =  452 bits (228), Expect = e-124
 Identities = 450/521 (86%), Gaps = 4/521 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
            |||| ||||||||||||||| ||||| ||||||||||||||| ||||| |||||    ||
Sbjct: 518  gtgaacttgtgttcgccaag-atgggaatcaaccccatcatg-atgagcgccggt--gag 573

                                                                        
Query: 61   ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
            |||||||| || ||||| |||||||| || ||||| ||| ||||||||||||||||||| 
Sbjct: 574  ctggagagcggcaacgccggagagccggcgaagctgatccggcagcggtaccgtgaggcc 633

                                                                        
Query: 121  gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 180
            || ||||| |||| |||||| ||||||||||||||||||||||||||||| || || |||
Sbjct: 634  gccgacatcatcaggaaggggaagatgtgctgcctcttcatcaacgatctcgatgccggt 693

                                                                        
Query: 181  gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
            || ||  |||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 694  gccggccggatgggcggcaccacccagtacaccgtcaacaaccagatggtgaacgccacc 753

                                                                        
Query: 241  ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
            || ||||||||||||||   |||||||||||| |||||||| ||||||||||||||| | 
Sbjct: 754  ctcatgaacatcgccgacaaccccaccaacgtccagctccccggcatgtacaacaagcaa 813

                                                                        
Query: 301  gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
            ||||||||||| ||||||||| |||||||||| ||||| ||||| || |||||||| || 
Sbjct: 814  gagaacccccgcgtgcccatcatcgtcaccggcaacgacttctccaccctctacgccccc 873

                                                                        
Query: 361  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
            || |||||||| ||||||||||||||||||||||||||||||||| | || |||||  ||
Sbjct: 874  ctcatccgtgacggtcgtatggagaagttctactgggctcccaccagggatgaccgggtc 933

                                                                        
Query: 421  ggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatc 480
            || |||||||  |||||||||  | ||||||| |||    | |||  |||| ||||| ||
Sbjct: 934  ggcgtctgcaccggtatcttcaggtccgacaacgtccccaaggaggatgtcatcaagctc 993

                                                     
Query: 481  gtcgacaccttcccaggacaatccattgactttttcggtgc 521
            |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 994  gtcgacaccttccccggccaatccattgacttcttcggtgc 1034

---

>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds
          Length = 1494

 Score =  452 bits (228), Expect = e-124
 Identities = 450/521 (86%), Gaps = 4/521 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
           |||| ||||||||||||||| ||||| ||||||||||||||| ||||| |||||    ||
Sbjct: 381 gtgaacttgtgttcgccaag-atgggaatcaaccccatcatg-atgagcgccggt--gag 436

                                                                       
Query: 61  ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
           |||||||| || ||||| |||||||| || ||||| ||| ||||||||||||||||||| 
Sbjct: 437 ctggagagcggcaacgccggagagccggcgaagctgatccggcagcggtaccgtgaggcc 496

                                                                       
Query: 121 gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 180
           || ||||| |||| |||||| ||||||||||||||||||||||||||||| || || |||
Sbjct: 497 gccgacatcatcaggaaggggaagatgtgctgcctcttcatcaacgatctcgatgccggt 556

                                                                       
Query: 181 gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
           || ||  |||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 557 gccggccggatgggcggcaccacccagtacaccgtcaacaaccagatggtgaacgccacc 616

                                                                       
Query: 241 ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
           || ||||||||||||||   |||||||||||| |||||||| ||||||||||||||| | 
Sbjct: 617 ctcatgaacatcgccgacaaccccaccaacgtccagctccccggcatgtacaacaagcaa 676

                                                                       
Query: 301 gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
           ||||||||||| ||||||||| |||||||||| ||||| ||||| || |||||||| || 
Sbjct: 677 gagaacccccgcgtgcccatcatcgtcaccggcaacgacttctccaccctctacgccccc 736

                                                                       
Query: 361 ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
           || |||||||| ||||||||||||||||||||||||||||||||| | || |||||  ||
Sbjct: 737 ctcatccgtgacggtcgtatggagaagttctactgggctcccaccagggatgaccgggtc 796

                                                                       
Query: 421 ggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatc 480
           || |||||||  |||||||||  | ||||||| |||    | |||  |||| ||||| ||
Sbjct: 797 ggcgtctgcaccggtatcttcaggtccgacaacgtccccaaggaggatgtcatcaagctc 856

                                                    
Query: 481 gtcgacaccttcccaggacaatccattgactttttcggtgc 521
           |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 857 gtcgacaccttccccggccaatccattgacttcttcggtgc 897

---

>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase
           precursor, mRNA, partial cds
          Length = 1336

 Score =  398 bits (201), Expect = e-108
 Identities = 466/550 (84%), Gaps = 5/550 (0%)
 Strand = Plus / Plus

                                                                       
Query: 3   gagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnagct 62
           ||||| || ||||||||| |||||||||| |||||||||| ||||| |||||    ||||
Sbjct: 139 gagctggtcttcgccaag-atgggcatcacccccatcatg-atgagcgccggc--gagct 194

                                                                       
Query: 63  ggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctgc 122
           |||||| || ||||| |||||||| |||||||||||||||||||| |||||||||||  |
Sbjct: 195 ggagagcggcaacgccggagagcccgccaagctcatcaggcagcgctaccgtgaggcctc 254

                                                                       
Query: 123 agacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgc 182
            ||| | ||||||||||| ||||||| ||||||||||||||||||  | ||||| || ||
Sbjct: 255 cgacctcatcaagaagggcaagatgtcctgcctcttcatcaacgacttggacgccggcgc 314

                                                                       
Query: 183 gggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccct 242
           |||| | |||||||| ||||| |||||||| || |||||||||||||| |||||||||||
Sbjct: 315 gggtcgcatgggcggcaccacccagtacacggtgaacaaccagatggtcaacgccaccct 374

                                                                       
Query: 243 gatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggagga 302
           |||||||||||||||   ||||||||||||||||||||| || |||||||||||||||||
Sbjct: 375 gatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacaacaaggagga 434

                                                                       
Query: 303 gaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctct 362
            |||||||| ||||||||| |||||||||| ||||| ||||| ||||||||||| || ||
Sbjct: 435 caacccccgcgtgcccatcatcgtcaccggcaacgacttctccacgctctacgcgccgct 494

                                                                       
Query: 363 gatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcgg 422
            ||||| || || || |||||||||||||||||||| |||||||| || ||||| |||||
Sbjct: 495 catccgcgacggccgcatggagaagttctactgggcgcccacccgcgaggaccgcatcgg 554

                                                                       
Query: 423 tgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgt 482
            ||||||||||| |||||||  ||||||   |||   || |||   |||||| || | ||
Sbjct: 555 cgtctgcaagggcatcttccgcaccgacggcgtcgacgaggagcacgtcgtccagctggt 614

                                                                       
Query: 483 cgacaccttcccaggacaatccattgactttttcggtgcttctgcgtgctcgggtgtacg 542
           |||||||||||| || || ||||| ||||| ||||| ||  |||||||| ||||| ||||
Sbjct: 615 cgacaccttccctggccagtccatcgacttcttcggcgc-gctgcgtgcccgggtctacg 673

                     
Query: 543 acgatgaggt 552
           |||| |||||
Sbjct: 674 acgacgaggt 683

---

>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase
           precursor (rca1) mRNA, complete cds
          Length = 1424

 Score =  394 bits (199), Expect = e-106
 Identities = 382/440 (86%), Gaps = 4/440 (0%)
 Strand = Plus / Plus

                                                                       
Query: 3   gagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnagct 62
           ||||| || ||||||||| |||||||||| |||||||||| ||||| |||||    ||||
Sbjct: 534 gagctggtcttcgccaag-atgggcatcacccccatcatg-atgagcgccggc--gagct 589

                                                                       
Query: 63  ggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctgc 122
           |||||| || ||||| |||||||| |||||||||||||||||||| |||||||||||  |
Sbjct: 590 ggagagcggcaacgccggagagcccgccaagctcatcaggcagcgctaccgtgaggcctc 649

                                                                       
Query: 123 agacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgc 182
            ||| | ||||||||||| ||||||| ||||||||||||||||||  | ||||| || ||
Sbjct: 650 cgacctcatcaagaagggcaagatgtcctgcctcttcatcaacgacttggacgccggcgc 709

                                                                       
Query: 183 gggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccct 242
           |||| | |||||||| ||||| |||||||| || |||||||||||||| |||||||||||
Sbjct: 710 gggtcgcatgggcggcaccacccagtacacggtgaacaaccagatggtcaacgccaccct 769

                                                                       
Query: 243 gatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggagga 302
           |||||||||||||||   ||||||||||||||||||||| || |||||||||||||||||
Sbjct: 770 gatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacaacaaggagga 829

                                                                       
Query: 303 gaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctct 362
            |||||||| ||||||||| |||||||||| ||||| ||||| ||||||||||| || ||
Sbjct: 830 caacccccgcgtgcccatcatcgtcaccggcaacgacttctccacgctctacgcgccgct 889

                                                                       
Query: 363 gatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcgg 422
            ||||| || || || |||||||||||||||||||| |||||||| || ||||| |||||
Sbjct: 890 catccgcgacggccgcatggagaagttctactgggcgcccacccgcgaggaccgcatcgg 949

                               
Query: 423 tgtctgcaagggtatcttcc 442
            ||||||||||| |||||||
Sbjct: 950 cgtctgcaagggcatcttcc 969

---

>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence
          Length = 1750

 Score =  359 bits (181), Expect = 7e-96
 Identities = 332/384 (86%)
 Strand = Plus / Plus

                                                                       
Query: 59  agctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgagg 118
           |||||||||| || ||||| |||||||| |||||||||||||||||||| ||||||||||
Sbjct: 586 agctggagagcggcaacgccggagagcccgccaagctcatcaggcagcgctaccgtgagg 645

                                                                       
Query: 119 ctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctg 178
           |  | ||| | ||||||||||| ||||||||||||||||||||||||||  | ||||| |
Sbjct: 646 cctccgacctcatcaagaagggcaagatgtgctgcctcttcatcaacgacttggacgccg 705

                                                                       
Query: 179 gtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcca 238
           | |||||| | |||||||| ||||| |||||||| || |||||||||||||| |||||||
Sbjct: 706 gcgcgggtcgcatgggcggcaccacccagtacacggtgaacaaccagatggtcaacgcca 765

                                                                       
Query: 239 ccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaagg 298
           |||||||||||||||||||   ||||||||||||||||||||| || |||||||||||||
Sbjct: 766 ccctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacaacaagg 825

                                                                       
Query: 299 aggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctc 358
           |||| ||     | ||||||||| |||||||||| ||||| ||||| ||||||||||| |
Sbjct: 826 aggacaannnnngcgtgcccatcatcgtcaccggcaacgacttctccacgctctacgcgc 885

                                                                       
Query: 359 ctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgta 418
           | || ||||| || || || |||||||||||||||||||| |||||||| || ||||| |
Sbjct: 886 cgctcatccgcgacggccgcatggagaagttctactgggcgcccacccgcgaggaccgca 945

                                   
Query: 419 tcggtgtctgcaagggtatcttcc 442
           |||| ||||||||||| |||||||
Sbjct: 946 tcggcgtctgcaagggcatcttcc 969

---

>ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.2 mRNA, complete cds
          Length = 1815

 Score =  351 bits (177), Expect = 2e-93
 Identities = 379/441 (85%), Gaps = 4/441 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
            ||||||||||  | |||||| ||||| |||||||| |||||| |||||||| || || ||
Sbjct: 698  gtgagcttgtcatggccaag-atgggtatcaacccaatcatg-atgagtgctgg-ag-ag 753

                                                                        
Query: 61   ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
            || |||||||| ||||| ||||| || || ||||| ||| | ||| ||||||||||||| 
Sbjct: 754  cttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggtaccgtgaggca 813

                                                                        
Query: 121  gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 180
            || ||| ||||||||||||| |||||||| || |||||||||||||||||||||||||||
Sbjct: 814  gctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatcttgacgctggt 873

                                                                        
Query: 181  gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
            |||||| | ||||| || || || |||||||| ||||||||||||||||| ||||| || 
Sbjct: 874  gcgggtcgtatgggtggtactactcagtacactgtcaacaaccagatggttaacgcaaca 933

                                                                        
Query: 241  ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
            || |||||||| || |||  ||| |||||||| |||||||| || |||||||||||||| 
Sbjct: 934  ctcatgaacattgctgataacccaaccaacgtccagctcccaggaatgtacaacaaggaa 993

                                                                        
Query: 301  gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
            |||||| | ||||| |||||| |   ||| |||||||||||||| || || |||||||||
Sbjct: 994  gagaacgcacgtgtccccatcatttgcactggtaacgatttctccaccctatacgctcct 1053

                                                                        
Query: 361  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
            || ||||||||||| ||||||||||||||||||||||| || |||||||| |||||||||
Sbjct: 1054 ctcatccgtgatggacgtatggagaagttctactgggccccgacccgtgaagaccgtatc 1113

                                 
Query: 421  ggtgtctgcaagggtatcttc 441
            |||||||||||||||||||||
Sbjct: 1114 ggtgtctgcaagggtatcttc 1134

---

>ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.3 mRNA, complete cds
          Length = 1928

 Score =  351 bits (177), Expect = 2e-93
 Identities = 379/441 (85%), Gaps = 4/441 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
            ||||||||||  | |||||| ||||| |||||||| |||||| |||||||| || || ||
Sbjct: 698  gtgagcttgtcatggccaag-atgggtatcaacccaatcatg-atgagtgctgg-ag-ag 753

                                                                        
Query: 61   ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
            || |||||||| ||||| ||||| || || ||||| ||| | ||| ||||||||||||| 
Sbjct: 754  cttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggtaccgtgaggca 813

                                                                        
Query: 121  gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 180
            || ||| ||||||||||||| |||||||| || |||||||||||||||||||||||||||
Sbjct: 814  gctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatcttgacgctggt 873

                                                                        
Query: 181  gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
            |||||| | ||||| || || || |||||||| ||||||||||||||||| ||||| || 
Sbjct: 874  gcgggtcgtatgggtggtactactcagtacactgtcaacaaccagatggttaacgcaaca 933

                                                                        
Query: 241  ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
            || |||||||| || |||  ||| |||||||| |||||||| || |||||||||||||| 
Sbjct: 934  ctcatgaacattgctgataacccaaccaacgtccagctcccaggaatgtacaacaaggaa 993

                                                                        
Query: 301  gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
            |||||| | ||||| |||||| |   ||| |||||||||||||| || || |||||||||
Sbjct: 994  gagaacgcacgtgtccccatcatttgcactggtaacgatttctccaccctatacgctcct 1053

                                                                        
Query: 361  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
            || ||||||||||| ||||||||||||||||||||||| || |||||||| |||||||||
Sbjct: 1054 ctcatccgtgatggacgtatggagaagttctactgggccccgacccgtgaagaccgtatc 1113

                                 
Query: 421  ggtgtctgcaagggtatcttc 441
            |||||||||||||||||||||
Sbjct: 1114 ggtgtctgcaagggtatcttc 1134

---

>ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.1 mRNA, complete cds
          Length = 1833

 Score =  351 bits (177), Expect = 2e-93
 Identities = 379/441 (85%), Gaps = 4/441 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
            ||||||||||  | |||||| ||||| |||||||| |||||| |||||||| || || ||
Sbjct: 727  gtgagcttgtcatggccaag-atgggtatcaacccaatcatg-atgagtgctgg-ag-ag 782

                                                                        
Query: 61   ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
            || |||||||| ||||| ||||| || || ||||| ||| | ||| ||||||||||||| 
Sbjct: 783  cttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggtaccgtgaggca 842

                                                                        
Query: 121  gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 180
            || ||| ||||||||||||| |||||||| || |||||||||||||||||||||||||||
Sbjct: 843  gctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatcttgacgctggt 902

                                                                        
Query: 181  gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
            |||||| | ||||| || || || |||||||| ||||||||||||||||| ||||| || 
Sbjct: 903  gcgggtcgtatgggtggtactactcagtacactgtcaacaaccagatggttaacgcaaca 962

                                                                        
Query: 241  ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
            || |||||||| || |||  ||| |||||||| |||||||| || |||||||||||||| 
Sbjct: 963  ctcatgaacattgctgataacccaaccaacgtccagctcccaggaatgtacaacaaggaa 1022

                                                                        
Query: 301  gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
            |||||| | ||||| |||||| |   ||| |||||||||||||| || || |||||||||
Sbjct: 1023 gagaacgcacgtgtccccatcatttgcactggtaacgatttctccaccctatacgctcct 1082

                                                                        
Query: 361  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
            || ||||||||||| ||||||||||||||||||||||| || |||||||| |||||||||
Sbjct: 1083 ctcatccgtgatggacgtatggagaagttctactgggccccgacccgtgaagaccgtatc 1142

                                 
Query: 421  ggtgtctgcaagggtatcttc 441
            |||||||||||||||||||||
Sbjct: 1143 ggtgtctgcaagggtatcttc 1163

---

>gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890) unknown protein
            (At2g39730) mRNA, complete cds
          Length = 1697

 Score =  351 bits (177), Expect = 2e-93
 Identities = 379/441 (85%), Gaps = 4/441 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
            ||||||||||  | |||||| ||||| |||||||| |||||| |||||||| || || ||
Sbjct: 609  gtgagcttgtcatggccaag-atgggtatcaacccaatcatg-atgagtgctgg-ag-ag 664

                                                                        
Query: 61   ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
            || |||||||| ||||| ||||| || || ||||| ||| | ||| ||||||||||||| 
Sbjct: 665  cttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggtaccgtgaggca 724

                                                                        
Query: 121  gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 180
            || ||| ||||||||||||| |||||||| || |||||||||||||||||||||||||||
Sbjct: 725  gctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatcttgacgctggt 784

                                                                        
Query: 181  gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
            |||||| | ||||| || || || |||||||| ||||||||||||||||| ||||| || 
Sbjct: 785  gcgggtcgtatgggtggtactactcagtacactgtcaacaaccagatggttaacgcaaca 844

                                                                        
Query: 241  ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
            || |||||||| || |||  ||| |||||||| |||||||| || |||||||||||||| 
Sbjct: 845  ctcatgaacattgctgataacccaaccaacgtccagctcccaggaatgtacaacaaggaa 904

                                                                        
Query: 301  gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
            |||||| | ||||| |||||| |   ||| |||||||||||||| || || |||||||||
Sbjct: 905  gagaacgcacgtgtccccatcatttgcactggtaacgatttctccaccctatacgctcct 964

                                                                        
Query: 361  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
            || ||||||||||| ||||||||||||||||||||||| || |||||||| |||||||||
Sbjct: 965  ctcatccgtgatggacgtatggagaagttctactgggccccgacccgtgaagaccgtatc 1024

                                 
Query: 421  ggtgtctgcaagggtatcttc 441
            |||||||||||||||||||||
Sbjct: 1025 ggtgtctgcaagggtatcttc 1045

---

>gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, complete cds
          Length = 1674

 Score =  351 bits (177), Expect = 2e-93
 Identities = 379/441 (85%), Gaps = 4/441 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
            ||||||||||  | |||||| ||||| |||||||| |||||| |||||||| || || ||
Sbjct: 612  gtgagcttgtcatggccaag-atgggtatcaacccaatcatg-atgagtgctgg-ag-ag 667

                                                                        
Query: 61   ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
            || |||||||| ||||| ||||| || || ||||| ||| | ||| ||||||||||||| 
Sbjct: 668  cttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggtaccgtgaggca 727

                                                                        
Query: 121  gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 180
            || ||| ||||||||||||| |||||||| || |||||||||||||||||||||||||||
Sbjct: 728  gctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatcttgacgctggt 787

                                                                        
Query: 181  gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
            |||||| | ||||| || || || |||||||| ||||||||||||||||| ||||| || 
Sbjct: 788  gcgggtcgtatgggtggtactactcagtacactgtcaacaaccagatggttaacgcaaca 847

                                                                        
Query: 241  ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
            || |||||||| || |||  ||| |||||||| |||||||| || |||||||||||||| 
Sbjct: 848  ctcatgaacattgctgataacccaaccaacgtccagctcccaggaatgtacaacaaggaa 907

                                                                        
Query: 301  gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
            |||||| | ||||| |||||| |   ||| |||||||||||||| || || |||||||||
Sbjct: 908  gagaacgcacgtgtccccatcatttgcactggtaacgatttctccaccctatacgctcct 967

                                                                        
Query: 361  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
            || ||||||||||| ||||||||||||||||||||||| || |||||||| |||||||||
Sbjct: 968  ctcatccgtgatggacgtatggagaagttctactgggccccgacccgtgaagaccgtatc 1027

                                 
Query: 421  ggtgtctgcaagggtatcttc 441
            |||||||||||||||||||||
Sbjct: 1028 ggtgtctgcaagggtatcttc 1048

---

>gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds
          Length = 1655

 Score =  351 bits (177), Expect = 2e-93
 Identities = 379/441 (85%), Gaps = 4/441 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
            ||||||||||  | |||||| ||||| |||||||| |||||| |||||||| || || ||
Sbjct: 609  gtgagcttgtcatggccaag-atgggtatcaacccaatcatg-atgagtgctgg-ag-ag 664

                                                                        
Query: 61   ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
            || |||||||| ||||| ||||| || || ||||| ||| | ||| ||||||||||||| 
Sbjct: 665  cttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggtaccgtgaggca 724

                                                                        
Query: 121  gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 180
            || ||| ||||||||||||| |||||||| || |||||||||||||||||||||||||||
Sbjct: 725  gctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatcttgacgctggt 784

                                                                        
Query: 181  gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
            |||||| | ||||| || || || |||||||| ||||||||||||||||| ||||| || 
Sbjct: 785  gcgggtcgtatgggtggtactactcagtacactgtcaacaaccagatggttaacgcaaca 844

                                                                        
Query: 241  ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
            || |||||||| || |||  ||| |||||||| |||||||| || |||||||||||||| 
Sbjct: 845  ctcatgaacattgctgataacccaaccaacgtccagctcccaggaatgtacaacaaggaa 904

                                                                        
Query: 301  gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
            |||||| | ||||| |||||| |   ||| |||||||||||||| || || |||||||||
Sbjct: 905  gagaacgcacgtgtccccatcatttgcactggtaacgatttctccaccctatacgctcct 964

                                                                        
Query: 361  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
            || ||||||||||| ||||||||||||||||||||||| || |||||||| |||||||||
Sbjct: 965  ctcatccgtgatggacgtatggagaagttctactgggccccgacccgtgaagaccgtatc 1024

                                 
Query: 421  ggtgtctgcaagggtatcttc 441
            |||||||||||||||||||||
Sbjct: 1025 ggtgtctgcaagggtatcttc 1045

---

>gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730/T5I7.3) mRNA, complete cds
          Length = 1674

 Score =  351 bits (177), Expect = 2e-93
 Identities = 379/441 (85%), Gaps = 4/441 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
            ||||||||||  | |||||| ||||| |||||||| |||||| |||||||| || || ||
Sbjct: 612  gtgagcttgtcatggccaag-atgggtatcaacccaatcatg-atgagtgctgg-ag-ag 667

                                                                        
Query: 61   ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
            || |||||||| ||||| ||||| || || ||||| ||| | ||| ||||||||||||| 
Sbjct: 668  cttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggtaccgtgaggca 727

                                                                        
Query: 121  gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 180
            || ||| ||||||||||||| |||||||| || |||||||||||||||||||||||||||
Sbjct: 728  gctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatcttgacgctggt 787

                                                                        
Query: 181  gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
            |||||| | ||||| || || || |||||||| ||||||||||||||||| ||||| || 
Sbjct: 788  gcgggtcgtatgggtggtactactcagtacactgtcaacaaccagatggttaacgcaaca 847

                                                                        
Query: 241  ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
            || |||||||| || |||  ||| |||||||| |||||||| || |||||||||||||| 
Sbjct: 848  ctcatgaacattgctgataacccaaccaacgtccagctcccaggaatgtacaacaaggaa 907

                                                                        
Query: 301  gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
            |||||| | ||||| |||||| |   ||| |||||||||||||| || || |||||||||
Sbjct: 908  gagaacgcacgtgtccccatcatttgcactggtaacgatttctccaccctatacgctcct 967

                                                                        
Query: 361  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
            || ||||||||||| ||||||||||||||||||||||| || |||||||| |||||||||
Sbjct: 968  ctcatccgtgatggacgtatggagaagttctactgggccccgacccgtgaagaccgtatc 1027

                                 
Query: 421  ggtgtctgcaagggtatcttc 441
            |||||||||||||||||||||
Sbjct: 1028 ggtgtctgcaagggtatcttc 1048

---

>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete
             sequence
          Length = 92624

 Score =  347 bits (175), Expect = 3e-92
 Identities = 331/383 (86%)
 Strand = Plus / Minus

                                                                         
Query: 59    agctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgagg 118
             |||| |||||||| ||||| ||||| || || ||||| ||| | ||| ||||||||||||
Sbjct: 14536 agcttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggtaccgtgagg 14477

                                                                         
Query: 119   ctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctg 178
             | || ||| ||||||||||||| |||||||| || |||||||||||||||||||||||||
Sbjct: 14476 cagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatcttgacgctg 14417

                                                                         
Query: 179   gtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcca 238
             |||||||| | ||||| || || || |||||||| ||||||||||||||||| ||||| |
Sbjct: 14416 gtgcgggtcgtatgggtggtactactcagtacactgtcaacaaccagatggttaacgcaa 14357

                                                                         
Query: 239   ccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaagg 298
             | || |||||||| || |||  ||| |||||||| |||||||| || |||||||||||||
Sbjct: 14356 cactcatgaacattgctgataacccaaccaacgtccagctcccaggaatgtacaacaagg 14297

                                                                         
Query: 299   aggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctc 358
             | |||||| | ||||| |||||| |   ||| |||||||||||||| || || |||||||
Sbjct: 14296 aagagaacgcacgtgtccccatcatttgcactggtaacgatttctccaccctatacgctc 14237

                                                                         
Query: 359   ctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgta 418
             |||| ||||||||||| ||||||||||||||||||||||| || |||||||| |||||||
Sbjct: 14236 ctctcatccgtgatggacgtatggagaagttctactgggccccgacccgtgaagaccgta 14177

                                    
Query: 419   tcggtgtctgcaagggtatcttc 441
             |||||||||||||||||||||||
Sbjct: 14176 tcggtgtctgcaagggtatcttc 14154

---

>gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphosphate carboxylase/oxygenase
            activase (rca) gene, complete cds
          Length = 3974

 Score =  347 bits (175), Expect = 3e-92
 Identities = 331/383 (86%)
 Strand = Plus / Plus

                                                                        
Query: 59   agctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgagg 118
            |||| |||||||| ||||| ||||| || || ||||| ||| | ||| ||||||||||||
Sbjct: 2747 agcttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggtaccgtgagg 2806

                                                                        
Query: 119  ctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctg 178
            | || ||| ||||||||||||| |||||||| || |||||||||||||||||||||||||
Sbjct: 2807 cagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatcttgacgctg 2866

                                                                        
Query: 179  gtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcca 238
            |||||||| | ||||| || || || |||||||| ||||||||||||||||| ||||| |
Sbjct: 2867 gtgcgggtcgtatgggtggtactactcagtacactgtcaacaaccagatggttaacgcaa 2926

                                                                        
Query: 239  ccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaagg 298
            | || |||||||| || |||  ||| |||||||| |||||||| || |||||||||||||
Sbjct: 2927 cactcatgaacattgctgataacccaaccaacgtccagctcccaggaatgtacaacaagg 2986

                                                                        
Query: 299  aggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctc 358
            | |||||| | ||||| |||||| |   ||| |||||||||||||| || || |||||||
Sbjct: 2987 aagagaacgcacgtgtccccatcatttgcactggtaacgatttctccaccctatacgctc 3046

                                                                        
Query: 359  ctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgta 418
            |||| ||||||||||| ||||||||||||||||||||||| || |||||||| |||||||
Sbjct: 3047 ctctcatccgtgatggacgtatggagaagttctactgggccccgacccgtgaagaccgta 3106

                                   
Query: 419  tcggtgtctgcaagggtatcttc 441
            |||||||||||||||||||||||
Sbjct: 3107 tcggtgtctgcaagggtatcttc 3129

---

>gb|BT000613.1| Arabidopsis thaliana Rubsico activase  (At2g39730/T5I7.3) mRNA,
           complete cds
          Length = 1425

 Score =  343 bits (173), Expect = 4e-91
 Identities = 378/441 (85%), Gaps = 4/441 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
           ||||||||||  | |||||| ||||| |||||||| |||||| |||||||| || || ||
Sbjct: 524 gtgagcttgtcatggccaag-atgggtatcaacccaatcatg-atgagtgctgg-ag-ag 579

                                                                       
Query: 61  ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
           || |||||||| ||||| ||||| || || ||||| ||| | ||| ||||||||||||| 
Sbjct: 580 cttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggtaccgtgaggca 639

                                                                       
Query: 121 gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 180
           || ||| ||||||||||||| |||||||| || ||| |||||||||||||||||||||||
Sbjct: 640 gctgacttgatcaagaagggaaagatgtgttgtctcctcatcaacgatcttgacgctggt 699

                                                                       
Query: 181 gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
           |||||| | ||||| || || || |||||||| ||||||||||||||||| ||||| || 
Sbjct: 700 gcgggtcgtatgggtggtactactcagtacactgtcaacaaccagatggttaacgcaaca 759

                                                                       
Query: 241 ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
           || |||||||| || |||  ||| |||||||| |||||||| || |||||||||||||| 
Sbjct: 760 ctcatgaacattgctgataacccaaccaacgtccagctcccaggaatgtacaacaaggaa 819

                                                                       
Query: 301 gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
           |||||| | ||||| |||||| |   ||| |||||||||||||| || || |||||||||
Sbjct: 820 gagaacgcacgtgtccccatcatttgcactggtaacgatttctccaccctatacgctcct 879

                                                                       
Query: 361 ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
           || ||||||||||| ||||||||||||||||||||||| || |||||||| |||||||||
Sbjct: 880 ctcatccgtgatggacgtatggagaagttctactgggccccgacccgtgaagaccgtatc 939

                                
Query: 421 ggtgtctgcaagggtatcttc 441
           |||||||||||||||||||||
Sbjct: 940 ggtgtctgcaagggtatcttc 960

---

>gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds
          Length = 1693

 Score =  343 bits (173), Expect = 4e-91
 Identities = 378/441 (85%), Gaps = 4/441 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
            ||||||||||  | |||||| ||||| |||||||| |||||| |||||||| || || ||
Sbjct: 601  gtgagcttgtcatggccaag-atgggtatcaacccaatcatg-atgagtgctgg-ag-ag 656

                                                                        
Query: 61   ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
            || |||||||| ||||| ||||| || || ||||| ||| | ||| ||||||||||||| 
Sbjct: 657  cttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggtaccgtgaggca 716

                                                                        
Query: 121  gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 180
            || ||| ||||||||||||| |||||||| || |||||||||||||||||||||||||||
Sbjct: 717  gctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatcttgacgctggt 776

                                                                        
Query: 181  gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
            |||||| | ||||| || || || |||||||| ||||||||||||||||| ||||| || 
Sbjct: 777  gcgggtcgtatgggtggtactactcagtacactgtcaacaaccagatggttaacgcaaca 836

                                                                        
Query: 241  ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
            || |||||||| || |||  ||| |||||||| ||||| || || |||||||||||||| 
Sbjct: 837  ctcatgaacattgctgataacccaaccaacgtccagcttccaggaatgtacaacaaggaa 896

                                                                        
Query: 301  gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
            |||||| | ||||| |||||| |   ||| |||||||||||||| || || |||||||||
Sbjct: 897  gagaacgcacgtgtccccatcatttgcactggtaacgatttctccaccctatacgctcct 956

                                                                        
Query: 361  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
            || ||||||||||| ||||||||||||||||||||||| || |||||||| |||||||||
Sbjct: 957  ctcatccgtgatggacgtatggagaagttctactgggccccgacccgtgaagaccgtatc 1016

                                 
Query: 421  ggtgtctgcaagggtatcttc 441
            |||||||||||||||||||||
Sbjct: 1017 ggtgtctgcaagggtatcttc 1037

---

>gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete sequence
          Length = 1787

 Score =  343 bits (173), Expect = 4e-91
 Identities = 378/441 (85%), Gaps = 4/441 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
            ||||||||||  | |||||| ||||| |||||||| |||||| |||||||| || || ||
Sbjct: 727  gtgagcttgtcatggccaag-atgggtatcaacccaatcatg-atgagtgctgg-ag-ag 782

                                                                        
Query: 61   ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
            || |||||||| ||||| ||||| || || ||||| ||| | ||| ||||||||||||| 
Sbjct: 783  cttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggtaccgtgaggca 842

                                                                        
Query: 121  gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 180
            || ||| ||||||||||||| |||||||| || |||||||||||||||||||||||||||
Sbjct: 843  gctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatcttgacgctggt 902

                                                                        
Query: 181  gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
            |||||| | ||||| || || || |||||||| |||||||| |||||||| ||||| || 
Sbjct: 903  gcgggtcgtatgggtggtactactcagtacactgtcaacaatcagatggttaacgcaaca 962

                                                                        
Query: 241  ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
            || |||||||| || |||  ||| |||||||| |||||||| || |||||||||||||| 
Sbjct: 963  ctcatgaacattgctgataacccaaccaacgtccagctcccaggaatgtacaacaaggaa 1022

                                                                        
Query: 301  gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
            |||||| | ||||| |||||| |   ||| |||||||||||||| || || |||||||||
Sbjct: 1023 gagaacgcacgtgtccccatcatttgcactggtaacgatttctccaccctatacgctcct 1082

                                                                        
Query: 361  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
            || ||||||||||| ||||||||||||||||||||||| || |||||||| |||||||||
Sbjct: 1083 ctcatccgtgatggacgtatggagaagttctactgggccccgacccgtgaagaccgtatc 1142

                                 
Query: 421  ggtgtctgcaagggtatcttc 441
            |||||||||||||||||||||
Sbjct: 1143 ggtgtctgcaagggtatcttc 1163

---

>gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase alpha 2 mRNA, complete cds
          Length = 1433

 Score =  339 bits (171), Expect = 7e-90
 Identities = 384/450 (85%), Gaps = 4/450 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
           ||||||||||||| |||||| ||||| ||||||||||||||| ||||||||||| || | 
Sbjct: 407 gtgagcttgtgtttgccaag-atgggtatcaaccccatcatg-atgagtgccgg-agaa- 462

                                                                       
Query: 61  ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
           ||||| ||||| ||||| || || ||||||||| | ||||||||  |||||||||| |||
Sbjct: 463 ctggaaagtggaaacgccggtgaaccagccaagttgatcaggcaaaggtaccgtgaagct 522

                                                                       
Query: 121 gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 180
           || ||||| ||||| ||||| || ||||||  ||||||||| |||||||| || ||||||
Sbjct: 523 gccgacataatcaaaaagggcaaaatgtgcgccctcttcattaacgatctcgatgctggt 582

                                                                       
Query: 181 gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
           || ||| | ||||| |||||||| || ||||||||||||||||||||||| || || |||
Sbjct: 583 gccggtcgtatgggaggaaccacccaatacaccgtcaacaaccagatggttaatgctacc 642

                                                                       
Query: 241 ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
           || |||||||||||||||  |||||||||||| |||||||| || |||||||||||||| 
Sbjct: 643 ctcatgaacatcgccgataaccccaccaacgtccagctccccggtatgtacaacaaggaa 702

                                                                       
Query: 301 gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
           |||||||||||||| |||||  ||||||| |||||||||||||| || || || ||||||
Sbjct: 703 gagaacccccgtgtccccattatcgtcactggtaacgatttctccacactgtatgctcct 762

                                                                       
Query: 361 ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
           || |||||||| |||||||||||||| || |||||||| || ||  | ||||||||| ||
Sbjct: 763 ctcatccgtgacggtcgtatggagaaattttactgggcaccaactagggacgaccgtgtc 822

                                         
Query: 421 ggtgtctgcaagggtatcttccagaccgac 450
           ||||| ||||| ||||| |||  |||||||
Sbjct: 823 ggtgtttgcaaaggtattttcaggaccgac 852



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 479 tcgtcgacaccttcccaggacaatccattgactttttcggtgc 521
           |||||||||||||||| || |||||||| || || ||||||||
Sbjct: 881 tcgtcgacaccttccccggccaatccatcgatttcttcggtgc 923

---

>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1694

 Score =  331 bits (167), Expect = 2e-87
 Identities = 387/455 (85%), Gaps = 4/455 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
            |||| ||||| || |||||| ||||| ||||||||||||||| |||||||| || || ||
Sbjct: 593  gtgaacttgtttttgccaag-atgggaatcaaccccatcatg-atgagtgctgg-ag-ag 648

                                                                        
Query: 61   ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
            ||||| ||||| || || ||||| || |||||||| ||||||||  |||||||||| |||
Sbjct: 649  ctggaaagtggaaatgcaggagaacctgccaagctgatcaggcaaaggtaccgtgaagct 708

                                                                        
Query: 121  gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 180
            || ||||| |||||||||||||| ||||||||||| |||||||||||||| |||||||| 
Sbjct: 709  gctgacattatcaagaagggtaaaatgtgctgcctgttcatcaacgatctcgacgctgga 768

                                                                        
Query: 181  gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
            || ||| | ||||| ||||| || || ||||| || ||||||||||||||||| ||||||
Sbjct: 769  gctggtcgtatgggtggaacaactcaatacactgttaacaaccagatggtgaatgccacc 828

                                                                        
Query: 241  ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
            || |||||||| || ||   ||| || || || ||||||||||| |||||||||||||| 
Sbjct: 829  ctcatgaacattgctgacaacccaacaaatgtccagctccctggtatgtacaacaaggaa 888

                                                                        
Query: 301  gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
            |||||||| |||||||| ||| | ||||| |||||||| ||||||||  | |||||||||
Sbjct: 889  gagaaccctcgtgtgcctatcattgtcactggtaacgacttctcgacattgtacgctcct 948

                                                                        
Query: 361  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
            || |||||||||||||||||||| || |||||||||||||| ||| | || |||||||| 
Sbjct: 949  cttatccgtgatggtcgtatggaaaaattctactgggctcctaccagggaagaccgtatt 1008

                                               
Query: 421  ggtgtctgcaagggtatcttccagaccgacaatgt 455
            ||||||||||||||||| |||  ||| ||||||||
Sbjct: 1009 ggtgtctgcaagggtattttcaggactgacaatgt 1043

---

>gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase 2 mRNA, partial cds
          Length = 1462

 Score =  331 bits (167), Expect = 2e-87
 Identities = 383/450 (85%), Gaps = 4/450 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
           ||||||||||||| |||||| ||||| ||||||||||||||| ||||||||||| || | 
Sbjct: 408 gtgagcttgtgtttgccaag-atgggtatcaaccccatcatg-atgagtgccgg-agaa- 463

                                                                       
Query: 61  ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
           ||||| ||||| ||||| || || ||||||||| | ||||||||  |||||||||| || 
Sbjct: 464 ctggaaagtggaaacgccggtgaaccagccaagttgatcaggcaaaggtaccgtgaagcc 523

                                                                       
Query: 121 gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 180
           || ||||| ||||| ||||| || ||||||  | | ||||| || ||||| || ||||||
Sbjct: 524 gccgacataatcaaaaagggcaaaatgtgcgccttgttcattaatgatctcgatgctggt 583

                                                                       
Query: 181 gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
           || ||| | ||||| |||||||| || ||||||||||||||||||||||| ||||| |||
Sbjct: 584 gccggtcgtatgggaggaaccacccaatacaccgtcaacaaccagatggttaacgctacc 643

                                                                       
Query: 241 ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
           || |||||||||||||||  |||||||||||| |||||||| || |||||||||||||| 
Sbjct: 644 ctcatgaacatcgccgataaccccaccaacgtccagctccccggtatgtacaacaaggaa 703

                                                                       
Query: 301 gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
           |||||||||||||| |||||| ||||||| |||||||||||||| || || || ||||||
Sbjct: 704 gagaacccccgtgtccccatcatcgtcactggtaacgatttctccacactgtatgctcct 763

                                                                       
Query: 361 ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
           || |||||||| |||||||||||||| || |||||||| || ||  | ||||||||||||
Sbjct: 764 ctcatccgtgacggtcgtatggagaaattttactgggcaccaactagggacgaccgtatc 823

                                         
Query: 421 ggtgtctgcaagggtatcttccagaccgac 450
           ||||| ||||| ||||| |||  |||||||
Sbjct: 824 ggtgtttgcaaaggtattttcaggaccgac 853



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 479 tcgtcgacaccttcccaggacaatccattgactttttcggtgc 521
           |||||||||||||||| || |||||||| || || ||||||||
Sbjct: 882 tcgtcgacaccttccccggccaatccatcgatttcttcggtgc 924

---

>gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
            activase 1 mRNA, complete cds
          Length = 1559

 Score =  325 bits (164), Expect = 1e-85
 Identities = 386/455 (84%), Gaps = 4/455 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
            |||||||||| || |||||| ||||| ||||||||||| ||| ||||||||||| || | 
Sbjct: 593  gtgagcttgtctttgccaag-atgggaatcaaccccattatg-atgagtgccgg-agaat 649

                                                                        
Query: 61   ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
             |||| ||||||||||| ||||| ||||||||| | ||||||||  ||||||||||||| 
Sbjct: 650  -tggaaagtgggaacgccggagaaccagccaagttgatcaggcaaaggtaccgtgaggcc 708

                                                                        
Query: 121  gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 180
            || ||||| |||||||| || || ||||| |||||||| ||||||||||| |||||||| 
Sbjct: 709  gccgacattatcaagaaagggaaaatgtgttgcctctttatcaacgatctcgacgctgga 768

                                                                        
Query: 181  gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
            || ||| | ||||| |||||||| || ||||| || |||||||| |||||||||||||| 
Sbjct: 769  gccggtcgtatgggaggaaccacacaatacacagtgaacaaccaaatggtgaacgccaca 828

                                                                        
Query: 241  ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
            || ||||||||||| |||  |||||||||||| |||||||| || |||||||||||||| 
Sbjct: 829  ctcatgaacatcgctgataaccccaccaacgttcagctccccggtatgtacaacaaggaa 888

                                                                        
Query: 301  gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
            |||||||| ||||| || ||| | |||||||||||||||||||||||||| ||||| || 
Sbjct: 889  gagaaccctcgtgttccgatcattgtcaccggtaacgatttctcgacgctgtacgcgccg 948

                                                                        
Query: 361  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
            || |||||||| ||||||||||||||||| |||||||| |||||| | || ||  | |||
Sbjct: 949  ctcatccgtgacggtcgtatggagaagttttactgggcacccaccagggaagataggatc 1008

                                               
Query: 421  ggtgtctgcaagggtatcttccagaccgacaatgt 455
            ||||| ||||  ||||| |||  ||||||||||||
Sbjct: 1009 ggtgtttgcacaggtattttcaggaccgacaatgt 1043



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                   
Query: 484  gacaccttcccaggacaatccattgactttttcggtgct 522
            ||||||||||| || ||||||||||||||||||||||||
Sbjct: 1072 gacaccttcccgggccaatccattgactttttcggtgct 1110

---

>gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, complete cds
          Length = 1809

 Score =  317 bits (160), Expect = 2e-83
 Identities = 437/522 (83%), Gaps = 6/522 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
            |||||||||||||||||||| ||||| ||||||||||||||| |||||||| || || | 
Sbjct: 648  gtgagcttgtgttcgccaag-atgggaatcaaccccatcatg-atgagtgc-gggagaat 704

                                                                        
Query: 61   ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
             |||| ||||| ||||| ||||||||||| ||| | ||||||||  ||||||||||||| 
Sbjct: 705  -tggaaagtggaaacgcaggagagccagcaaagttgatcaggcaaaggtaccgtgaggca 763

                                                                        
Query: 121  gcagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacgatcttgacgctgg 179
            |||||||| ||    ||||| |||||||| ||| || |||||||||||||| ||||| ||
Sbjct: 764  gcagacataattgccaagggaaagatgtg-tgctctgttcatcaacgatctcgacgcggg 822

                                                                        
Query: 180  tgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccac 239
            ||| ||  | ||||| || ||||| || |||||||| |||||||||||||| ||||||||
Sbjct: 823  tgctggacgtatgggaggcaccacacaatacaccgtgaacaaccagatggttaacgccac 882

                                                                        
Query: 240  cctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaagga 299
            ||| |||||||| || ||   ||||||||| || || |||||||| |||||||||||| |
Sbjct: 883  cctcatgaacattgctgacaaccccaccaatgtccaactccctggtatgtacaacaagca 942

                                                                        
Query: 300  ggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcc 359
             |||||| ||||||| |||||  ||||||| |||||||| ||||| ||  | ||||||||
Sbjct: 943  agagaacgcccgtgttcccattatcgtcactggtaacgacttctccaccttgtacgctcc 1002

                                                                        
Query: 360  tctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtat 419
             || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1003 ccttatccgtgatggtcgtatggagaagttctactgggctcccacccgtgaggaccgtat 1062

                                                                        
Query: 420  cggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagat 479
            ||||||   ||  |||||||||  ||||||||||||   ||| ||    || |||||| |
Sbjct: 1063 cggtgttgccaccggtatcttcaggaccgacaatgttcctgaggaccacgttgtcaagct 1122

                                                      
Query: 480  cgtcgacaccttcccaggacaatccattgactttttcggtgc 521
            ||||||||||||||| || ||||| ||||| || ||||||||
Sbjct: 1123 cgtcgacaccttccctggccaatctattgatttcttcggtgc 1164

---

>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA,
           partial cds; nuclear gene for chloroplast product
          Length = 651

 Score =  317 bits (160), Expect = 2e-83
 Identities = 293/336 (87%), Gaps = 1/336 (0%)
 Strand = Plus / Plus

                                                                       
Query: 229 gtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatg 288
           |||||||||||||||||||||||||||||   ||| ||||||||||||||||| || |||
Sbjct: 1   gtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggatg 60

                                                                       
Query: 289 tacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacg 348
           |||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||||| |||
Sbjct: 61  tacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacg 120

                                                                       
Query: 349 ctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgt 408
           || ||||| || || |||||||| || |||||||||||||||||||||||||||||||| 
Sbjct: 121 ctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgc 180

                                                                       
Query: 409 gacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtct 468
           ||||||||| |||| |||||||||||||||||||  |||||||| |||   ||||||   
Sbjct: 181 gacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggac 240

                                                                       
Query: 469 gtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgcttctgcg 528
            |||||||||||||||||| ||||||||| |||||||| || || ||||| || ||| ||
Sbjct: 241 atcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttcggcgc-tcttcg 299

                                               
Query: 529 tgctcgggtgtacgacgatgaggtgcgcaagtgggt 564
           ||| || || |||||||| |||||||||||||||||
Sbjct: 300 tgcccgtgtttacgacgacgaggtgcgcaagtgggt 335



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                              
Query: 581 gagaacattggcaagaggctggtgaactcgcggga 615
           |||||||||||||||||||||||||||||| ||||
Sbjct: 352 gagaacattggcaagaggctggtgaactcgaggga 386

---

>gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence
          Length = 619

 Score =  301 bits (152), Expect = 1e-78
 Identities = 326/384 (84%)
 Strand = Plus / Plus

                                                                       
Query: 59  agctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgagg 118
           |||| ||||| || ||||| || ||||| || ||||| ||| | ||||| ||||||||||
Sbjct: 132 agctagagagcggcaacgccggtgagccggcgaagctgatccgtcagcgctaccgtgagg 191

                                                                       
Query: 119 ctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctg 178
           | || ||| |||||  |||||| ||||||| |||||| |||||||||||||| ||||| |
Sbjct: 192 ccgcggacctgatctcgaagggcaagatgtcctgcctgttcatcaacgatctcgacgccg 251

                                                                       
Query: 179 gtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcca 238
           | || ||  | |||||||| ||||| |||||||| || ||||||||||||||||||||||
Sbjct: 252 gcgcaggccgcatgggcggcaccacccagtacacggtgaacaaccagatggtgaacgcca 311

                                                                       
Query: 239 ccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaagg 298
           |||||||||||||||||||   ||||||||||||||||||||| || ||||||| |||||
Sbjct: 312 ccctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaagg 371

                                                                       
Query: 299 aggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctc 358
            ||| ||||| ||||||||||||||||||||||| ||||| ||||| ||||| ||||| |
Sbjct: 372 tggacaacccgcgtgtgcccatcgtcgtcaccggcaacgacttctccacgctgtacgcgc 431

                                                                       
Query: 359 ctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgta 418
           | || || || || || || ||||| |||||||||||||| |||||||| |||||||| |
Sbjct: 432 cgctcattcgcgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgca 491

                                   
Query: 419 tcggtgtctgcaagggtatcttcc 442
           |||| || |||||||| |||||||
Sbjct: 492 tcggcgtgtgcaagggcatcttcc 515

---

>gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 genomic sequence
          Length = 633

 Score =  301 bits (152), Expect = 1e-78
 Identities = 326/384 (84%)
 Strand = Plus / Plus

                                                                       
Query: 59  agctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgagg 118
           |||| ||||| || ||||| || ||||| || ||||| ||| | ||||| ||||||||||
Sbjct: 146 agctagagagcggcaacgccggtgagccggcgaagctgatccgtcagcgctaccgtgagg 205

                                                                       
Query: 119 ctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctg 178
           | || ||| |||||   ||||| ||||||| |||||| |||||||||||||| ||||| |
Sbjct: 206 ccgcggacctgatctccaagggcaagatgtcctgcctgttcatcaacgatctcgacgccg 265

                                                                       
Query: 179 gtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcca 238
           | || ||  | |||||||| ||||| |||||||| || ||||||||||||||||||||||
Sbjct: 266 gcgcaggccgcatgggcggcaccacccagtacacggtgaacaaccagatggtgaacgcca 325

                                                                       
Query: 239 ccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaagg 298
           |||||||||||||||||||   ||||||||||||||||||||| || ||||||| |||||
Sbjct: 326 ccctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaagg 385

                                                                       
Query: 299 aggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctc 358
            ||| ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| |
Sbjct: 386 tggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgc 445

                                                                       
Query: 359 ctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgta 418
           | || |||||||| || || ||||| |||||||||||||| |||||||| |||||||| |
Sbjct: 446 cgctcatccgtgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgca 505

                                   
Query: 419 tcggtgtctgcaagggtatcttcc 442
           |||| || |||||||| |||||||
Sbjct: 506 tcggcgtgtgcaagggcatcttcc 529

---

>gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 genomic sequence
          Length = 635

 Score =  301 bits (152), Expect = 1e-78
 Identities = 326/384 (84%)
 Strand = Plus / Plus

                                                                       
Query: 59  agctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgagg 118
           |||| ||||| || ||||| || ||||| || ||||| ||| | ||||| ||||||||||
Sbjct: 148 agctagagagcggcaacgccggtgagccggcgaagctgatccgtcagcgctaccgtgagg 207

                                                                       
Query: 119 ctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctg 178
           | || ||| |||||   ||||| ||||||| |||||| |||||||||||||| ||||| |
Sbjct: 208 ccgcggacctgatctccaagggcaagatgtcctgcctgttcatcaacgatctcgacgccg 267

                                                                       
Query: 179 gtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcca 238
           | || ||  | |||||||| ||||| |||||||| || ||||||||||||||||||||||
Sbjct: 268 gcgcaggccgcatgggcggcaccacccagtacacggtgaacaaccagatggtgaacgcca 327

                                                                       
Query: 239 ccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaagg 298
           |||||||||||||||||||   ||||||||||||||||||||| || ||||||| |||||
Sbjct: 328 ccctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaagg 387

                                                                       
Query: 299 aggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctc 358
            ||| ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| |
Sbjct: 388 tggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgc 447

                                                                       
Query: 359 ctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgta 418
           | || |||||||| || || ||||| |||||||||||||| |||||||| |||||||| |
Sbjct: 448 cgctcatccgtgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgca 507

                                   
Query: 419 tcggtgtctgcaagggtatcttcc 442
           |||| || |||||||| |||||||
Sbjct: 508 tcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 genomic sequence
          Length = 639

 Score =  301 bits (152), Expect = 1e-78
 Identities = 326/384 (84%)
 Strand = Plus / Plus

                                                                       
Query: 59  agctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgagg 118
           |||| ||||| || ||||| || ||||| || ||||| ||| | ||||| ||||||||||
Sbjct: 152 agctagagagcggcaacgccggtgagccggcgaagctgatccgtcagcgctaccgtgagg 211

                                                                       
Query: 119 ctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctg 178
           | || ||| |||||   ||||| ||||||| |||||| |||||||||||||| ||||| |
Sbjct: 212 ccgcggacctgatctccaagggcaagatgtcctgcctgttcatcaacgatctcgacgccg 271

                                                                       
Query: 179 gtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcca 238
           | || ||  | |||||||| ||||| |||||||| || ||||||||||||||||||||||
Sbjct: 272 gcgcaggccgcatgggcggcaccacccagtacacggtgaacaaccagatggtgaacgcca 331

                                                                       
Query: 239 ccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaagg 298
           |||||||||||||||||||   ||||||||||||||||||||| || ||||||| |||||
Sbjct: 332 ccctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaagg 391

                                                                       
Query: 299 aggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctc 358
            ||| ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| |
Sbjct: 392 tggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgc 451

                                                                       
Query: 359 ctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgta 418
           | || |||||||| || || ||||| |||||||||||||| |||||||| |||||||| |
Sbjct: 452 cgctcatccgtgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgca 511

                                   
Query: 419 tcggtgtctgcaagggtatcttcc 442
           |||| || |||||||| |||||||
Sbjct: 512 tcggcgtgtgcaagggcatcttcc 535

---

>gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 genomic sequence
          Length = 635

 Score =  301 bits (152), Expect = 1e-78
 Identities = 326/384 (84%)
 Strand = Plus / Plus

                                                                       
Query: 59  agctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgagg 118
           |||| ||||| || ||||| || ||||| || ||||| ||| | ||||| ||||||||||
Sbjct: 148 agctagagagcggcaacgccggtgagccggcgaagctgatccgtcagcgctaccgtgagg 207

                                                                       
Query: 119 ctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctg 178
           | || ||| |||||   ||||| ||||||| |||||| |||||||||||||| ||||| |
Sbjct: 208 ccgcggacctgatctccaagggcaagatgtcctgcctgttcatcaacgatctcgacgccg 267

                                                                       
Query: 179 gtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcca 238
           | || ||  | |||||||| ||||| |||||||| || ||||||||||||||||||||||
Sbjct: 268 gcgcaggccgcatgggcggcaccacccagtacacggtgaacaaccagatggtgaacgcca 327

                                                                       
Query: 239 ccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaagg 298
           |||||||||||||||||||   ||||||||||||||||||||| || ||||||| |||||
Sbjct: 328 ccctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaagg 387

                                                                       
Query: 299 aggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctc 358
            ||| ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| |
Sbjct: 388 tggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgc 447

                                                                       
Query: 359 ctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgta 418
           | || |||||||| || || ||||| |||||||||||||| |||||||| |||||||| |
Sbjct: 448 cgctcatccgtgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgca 507

                                   
Query: 419 tcggtgtctgcaagggtatcttcc 442
           |||| || |||||||| |||||||
Sbjct: 508 tcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 genomic sequence
          Length = 627

 Score =  301 bits (152), Expect = 1e-78
 Identities = 326/384 (84%)
 Strand = Plus / Plus

                                                                       
Query: 59  agctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgagg 118
           |||| ||||| || ||||| || ||||| || ||||| ||| | ||||| ||||||||||
Sbjct: 140 agctagagagcggcaacgccggtgagccggcgaagctgatccgtcagcgctaccgtgagg 199

                                                                       
Query: 119 ctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctg 178
           | || ||| |||||  |||||| ||||||| |||||| |||||||||||||| ||||| |
Sbjct: 200 cggcggacctgatctcgaagggcaagatgtcctgcctgttcatcaacgatctggacgccg 259

                                                                       
Query: 179 gtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcca 238
           | || ||  | |||||||| ||||| |||||||| || ||||||||||||||||||||||
Sbjct: 260 gcgcaggccgcatgggcggcaccacccagtacacggtgaacaaccagatggtgaacgcca 319

                                                                       
Query: 239 ccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaagg 298
           |||||||||||||||||||   ||||||||||||||||||||| || ||||||| |||||
Sbjct: 320 ccctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaagg 379

                                                                       
Query: 299 aggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctc 358
            ||| ||||| ||||||||||||||||||||||| ||||| ||||| ||||| ||||| |
Sbjct: 380 tggacaacccgcgtgtgcccatcgtcgtcaccggcaacgacttctccacgctgtacgcgc 439

                                                                       
Query: 359 ctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgta 418
           | || ||||| || || || ||||| |||||||||||||| |||||||| || ||||| |
Sbjct: 440 cgctcatccgcgacgggcgcatggacaagttctactgggcgcccacccgggaggaccgca 499

                                   
Query: 419 tcggtgtctgcaagggtatcttcc 442
           |||| || |||||||| |||||||
Sbjct: 500 tcggcgtgtgcaagggcatcttcc 523

---

>gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 genomic sequence
          Length = 635

 Score =  301 bits (152), Expect = 1e-78
 Identities = 326/384 (84%)
 Strand = Plus / Plus

                                                                       
Query: 59  agctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgagg 118
           |||| ||||| || ||||| || ||||| || ||||| ||| | ||||| ||||||||||
Sbjct: 148 agctagagagcggcaacgccggtgagccggcgaagctgatccgtcagcgctaccgtgagg 207

                                                                       
Query: 119 ctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctg 178
           | || ||| |||||   ||||| ||||||| |||||| |||||||||||||| ||||| |
Sbjct: 208 ccgcggacctgatctccaagggcaagatgtcctgcctgttcatcaacgatctcgacgccg 267

                                                                       
Query: 179 gtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcca 238
           | || ||  | |||||||| ||||| |||||||| || ||||||||||||||||||||||
Sbjct: 268 gcgcaggccgcatgggcggcaccacccagtacacggtgaacaaccagatggtgaacgcca 327

                                                                       
Query: 239 ccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaagg 298
           |||||||||||||||||||   ||||||||||||||||||||| || ||||||| |||||
Sbjct: 328 ccctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaagg 387

                                                                       
Query: 299 aggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctc 358
            ||| ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| |
Sbjct: 388 tggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgc 447

                                                                       
Query: 359 ctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgta 418
           | || |||||||| || || ||||| |||||||||||||| |||||||| |||||||| |
Sbjct: 448 cgctcatccgtgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgca 507

                                   
Query: 419 tcggtgtctgcaagggtatcttcc 442
           |||| || |||||||| |||||||
Sbjct: 508 tcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 genomic sequence
          Length = 635

 Score =  301 bits (152), Expect = 1e-78
 Identities = 326/384 (84%)
 Strand = Plus / Plus

                                                                       
Query: 59  agctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgagg 118
           |||| ||||| || ||||| || ||||| || ||||| ||| | ||||| ||||||||||
Sbjct: 148 agctagagagcggcaacgccggtgagccggcgaagctgatccgtcagcgctaccgtgagg 207

                                                                       
Query: 119 ctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctg 178
           | || ||| |||||   ||||| ||||||| |||||| |||||||||||||| ||||| |
Sbjct: 208 ccgcggacctgatctccaagggcaagatgtcctgcctgttcatcaacgatctcgacgccg 267

                                                                       
Query: 179 gtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcca 238
           | || ||  | |||||||| ||||| |||||||| || ||||||||||||||||||||||
Sbjct: 268 gcgcaggccgcatgggcggcaccacccagtacacggtgaacaaccagatggtgaacgcca 327

                                                                       
Query: 239 ccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaagg 298
           |||||||||||||||||||   ||||||||||||||||||||| || ||||||| |||||
Sbjct: 328 ccctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaagg 387

                                                                       
Query: 299 aggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctc 358
            ||| ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| |
Sbjct: 388 tggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgc 447

                                                                       
Query: 359 ctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgta 418
           | || |||||||| || || ||||| |||||||||||||| |||||||| |||||||| |
Sbjct: 448 cgctcatccgtgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgca 507

                                   
Query: 419 tcggtgtctgcaagggtatcttcc 442
           |||| || |||||||| |||||||
Sbjct: 508 tcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 genomic sequence
          Length = 635

 Score =  301 bits (152), Expect = 1e-78
 Identities = 326/384 (84%)
 Strand = Plus / Plus

                                                                       
Query: 59  agctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgagg 118
           |||| ||||| || ||||| || ||||| || ||||| ||| | ||||| ||||||||||
Sbjct: 148 agctagagagcggcaacgccggtgagccggcgaagctgatccgtcagcgctaccgtgagg 207

                                                                       
Query: 119 ctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctg 178
           | || ||| |||||   ||||| ||||||| |||||| |||||||||||||| ||||| |
Sbjct: 208 ccgcggacctgatctccaagggcaagatgtcctgcctgttcatcaacgatctcgacgccg 267

                                                                       
Query: 179 gtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcca 238
           | || ||  | |||||||| ||||| |||||||| || ||||||||||||||||||||||
Sbjct: 268 gcgcaggccgcatgggcggcaccacccagtacacggtgaacaaccagatggtgaacgcca 327

                                                                       
Query: 239 ccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaagg 298
           |||||||||||||||||||   ||||||||||||||||||||| || ||||||| |||||
Sbjct: 328 ccctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaagg 387

                                                                       
Query: 299 aggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctc 358
            ||| ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| |
Sbjct: 388 tggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgc 447

                                                                       
Query: 359 ctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgta 418
           | || |||||||| || || ||||| |||||||||||||| |||||||| |||||||| |
Sbjct: 448 cgctcatccgtgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgca 507

                                   
Query: 419 tcggtgtctgcaagggtatcttcc 442
           |||| || |||||||| |||||||
Sbjct: 508 tcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 genomic sequence
          Length = 637

 Score =  301 bits (152), Expect = 1e-78
 Identities = 326/384 (84%)
 Strand = Plus / Plus

                                                                       
Query: 59  agctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgagg 118
           |||| ||||| || ||||| || ||||| || ||||| ||| | ||||| ||||||||||
Sbjct: 150 agctagagagcggcaacgccggtgagccggcgaagctgatccgtcagcgctaccgtgagg 209

                                                                       
Query: 119 ctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctg 178
           | || ||| |||||   ||||| ||||||| |||||| |||||||||||||| ||||| |
Sbjct: 210 ccgcggacctgatctccaagggcaagatgtcctgcctgttcatcaacgatctcgacgccg 269

                                                                       
Query: 179 gtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcca 238
           | || ||  | |||||||| ||||| |||||||| || ||||||||||||||||||||||
Sbjct: 270 gcgcaggccgcatgggcggcaccacccagtacacggtgaacaaccagatggtgaacgcca 329

                                                                       
Query: 239 ccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaagg 298
           |||||||||||||||||||   ||||||||||||||||||||| || ||||||| |||||
Sbjct: 330 ccctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaagg 389

                                                                       
Query: 299 aggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctc 358
            ||| ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| |
Sbjct: 390 tggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgc 449

                                                                       
Query: 359 ctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgta 418
           | || |||||||| || || ||||| |||||||||||||| |||||||| |||||||| |
Sbjct: 450 cgctcatccgtgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgca 509

                                   
Query: 419 tcggtgtctgcaagggtatcttcc 442
           |||| || |||||||| |||||||
Sbjct: 510 tcggcgtgtgcaagggcatcttcc 533

---

>gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 genomic sequence
          Length = 637

 Score =  293 bits (148), Expect = 3e-76
 Identities = 325/384 (84%)
 Strand = Plus / Plus

                                                                       
Query: 59  agctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgagg 118
           |||| ||||| || ||||| || ||||| || ||||| ||| | ||||| ||||||||||
Sbjct: 150 agctagagagcggcaacgccggtgagccggcgaagctgatccgtcagcgctaccgtgagg 209

                                                                       
Query: 119 ctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctg 178
           | || ||| |||||   ||||| ||||||| |||||| |||||||||||||| ||||| |
Sbjct: 210 ccgcggacctgatctccaagggcaagatgtcctgcctgttcatcaacgatctcgacgccg 269

                                                                       
Query: 179 gtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcca 238
           | || ||  | |||||||| ||||| |||||||| || ||||||||||||||||||||||
Sbjct: 270 gcgcaggccgcatgggcggcaccacccagtacacggtgaacaaccagatggtgaacgcca 329

                                                                       
Query: 239 ccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaagg 298
           |||||||||||||||||||   ||||||||||||||||||||| || ||||||| |||||
Sbjct: 330 ccctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaagg 389

                                                                       
Query: 299 aggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctc 358
            ||| ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| |
Sbjct: 390 tggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgc 449

                                                                       
Query: 359 ctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgta 418
           | || ||||| || || || ||||| |||||||||||||| |||||||| |||||||| |
Sbjct: 450 cgctcatccgcgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgca 509

                                   
Query: 419 tcggtgtctgcaagggtatcttcc 442
           |||| || |||||||| |||||||
Sbjct: 510 tcggcgtgtgcaagggcatcttcc 533

---

>gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 genomic sequence
          Length = 635

 Score =  293 bits (148), Expect = 3e-76
 Identities = 325/384 (84%)
 Strand = Plus / Plus

                                                                       
Query: 59  agctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgagg 118
           |||| ||||| || ||||| || ||||| || ||||| ||| | ||||| ||||||||||
Sbjct: 148 agctagagagcggcaacgccggtgagccggcgaagctgatccgtcagcgctaccgtgagg 207

                                                                       
Query: 119 ctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctg 178
           | || ||| |||||   ||||| ||||||| |||||| |||||||||||||| ||||| |
Sbjct: 208 ccgcggacctgatctccaagggcaagatgtcctgcctgttcatcaacgatctcgacgccg 267

                                                                       
Query: 179 gtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcca 238
           | || ||  | |||||||| ||||| |||||||| || ||||||||||||||||||||||
Sbjct: 268 gcgcaggccgcatgggcggcaccacccagtacacggtgaacaaccagatggtgaacgcca 327

                                                                       
Query: 239 ccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaagg 298
           |||||||||||||||||||   ||||||||||||||||||||| || ||||||| |||||
Sbjct: 328 ccctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaagg 387

                                                                       
Query: 299 aggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctc 358
            ||| ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| |
Sbjct: 388 tggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgc 447

                                                                       
Query: 359 ctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgta 418
           | || ||||| || || || ||||| |||||||||||||| |||||||| |||||||| |
Sbjct: 448 cgctcatccgcgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgca 507

                                   
Query: 419 tcggtgtctgcaagggtatcttcc 442
           |||| || |||||||| |||||||
Sbjct: 508 tcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 genomic sequence
          Length = 633

 Score =  293 bits (148), Expect = 3e-76
 Identities = 325/384 (84%)
 Strand = Plus / Plus

                                                                       
Query: 59  agctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgagg 118
           |||| ||||| || ||||| || ||||| || ||||| ||| | ||||| ||||||||||
Sbjct: 146 agctagagagcggcaacgccggtgagccggcgaagctgatccgtcagcgctaccgtgagg 205

                                                                       
Query: 119 ctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctg 178
           | || ||| |||||   ||||| ||||||| |||||| |||||||||||||| ||||| |
Sbjct: 206 ccgcggacctgatctccaagggcaagatgtcctgcctgttcatcaacgatctcgacgccg 265

                                                                       
Query: 179 gtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcca 238
           | || ||  | |||||||| ||||| |||||||| || ||||||||||||||||||||||
Sbjct: 266 gcgcaggccgcatgggcggcaccacccagtacacggtgaacaaccagatggtgaacgcca 325

                                                                       
Query: 239 ccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaagg 298
           |||||||||||||||||||   ||||||||||||||||||||| || ||||||| |||||
Sbjct: 326 ccctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaagg 385

                                                                       
Query: 299 aggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctc 358
            ||| ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| |
Sbjct: 386 tggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgc 445

                                                                       
Query: 359 ctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgta 418
           | || ||||| || || || ||||| |||||||||||||| |||||||| |||||||| |
Sbjct: 446 cgctcatccgcgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgca 505

                                   
Query: 419 tcggtgtctgcaagggtatcttcc 442
           |||| || |||||||| |||||||
Sbjct: 506 tcggcgtgtgcaagggcatcttcc 529

---

>gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 genomic sequence
          Length = 633

 Score =  293 bits (148), Expect = 3e-76
 Identities = 325/384 (84%)
 Strand = Plus / Plus

                                                                       
Query: 59  agctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgagg 118
           |||| ||||| || ||||| || ||||| || ||||| ||| | ||||| ||||||||||
Sbjct: 146 agctagagagcggcaacgccggtgagccggcgaagctgatccgtcagcgctaccgtgagg 205

                                                                       
Query: 119 ctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctg 178
           | || ||| |||||   ||||| ||||||| |||||| |||||||||||||| ||||| |
Sbjct: 206 ccgcggacctgatctccaagggcaagatgtcctgcctgttcatcaacgatctcgacgccg 265

                                                                       
Query: 179 gtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcca 238
           | || ||  | |||||||| ||||| |||||||| || ||||||||||||||||||||||
Sbjct: 266 gcgcaggccgcatgggcggcaccacccagtacacggtgaacaaccagatggtgaacgcca 325

                                                                       
Query: 239 ccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaagg 298
           |||||||||||||||||||   ||||||||||||||||||||| || ||||||| |||||
Sbjct: 326 ccctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaagg 385

                                                                       
Query: 299 aggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctc 358
            ||| ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| |
Sbjct: 386 tggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgc 445

                                                                       
Query: 359 ctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgta 418
           | || ||||| || || || ||||| |||||||||||||| |||||||| |||||||| |
Sbjct: 446 cgctcatccgcgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgca 505

                                   
Query: 419 tcggtgtctgcaagggtatcttcc 442
           |||| || |||||||| |||||||
Sbjct: 506 tcggcgtgtgcaagggcatcttcc 529

---

>gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 genomic sequence
          Length = 635

 Score =  293 bits (148), Expect = 3e-76
 Identities = 325/384 (84%)
 Strand = Plus / Plus

                                                                       
Query: 59  agctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgagg 118
           |||| ||||| || ||||| || ||||| || ||||| ||| | ||||| ||||||||||
Sbjct: 148 agctagagagcggcaacgccggtgagccggcgaagctgatccgtcagcgctaccgtgagg 207

                                                                       
Query: 119 ctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctg 178
           | || ||| |||||   ||||| ||||||| |||||| |||||||||||||| ||||| |
Sbjct: 208 ccgcggacctgatctccaagggcaagatgtcctgcctgttcatcaacgatctcgacgccg 267

                                                                       
Query: 179 gtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcca 238
           | || ||  | |||||||| ||||| |||||||| || ||||||||||||||||||||||
Sbjct: 268 gcgcaggccgcatgggcggcaccacccagtacacggtgaacaaccagatggtgaacgcca 327

                                                                       
Query: 239 ccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaagg 298
           |||||||||||||||||||   ||||||||||||||||||||| || ||||||| |||||
Sbjct: 328 ccctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaagg 387

                                                                       
Query: 299 aggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctc 358
            ||| ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| |
Sbjct: 388 tggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgc 447

                                                                       
Query: 359 ctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgta 418
           | || ||||| || || || ||||| |||||||||||||| |||||||| |||||||| |
Sbjct: 448 cgctcatccgcgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgca 507

                                   
Query: 419 tcggtgtctgcaagggtatcttcc 442
           |||| || |||||||| |||||||
Sbjct: 508 tcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genomic sequence
          Length = 639

 Score =  293 bits (148), Expect = 3e-76
 Identities = 325/384 (84%)
 Strand = Plus / Plus

                                                                       
Query: 59  agctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgagg 118
           |||| ||||| || ||||| || ||||| || ||||| ||| | ||||| ||||||||||
Sbjct: 152 agctagagagcggcaacgccggtgagccggcgaagctgatccgtcagcgctaccgtgagg 211

                                                                       
Query: 119 ctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctg 178
           | || ||| |||||   ||||| ||||||| |||||| |||||||||||||| ||||| |
Sbjct: 212 ccgcggacctgatctccaagggcaagatgtcctgcctgttcatcaacgatctcgacgccg 271

                                                                       
Query: 179 gtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcca 238
           | || ||  | |||||||| ||||| |||||||| || ||||||||||||||||||||||
Sbjct: 272 gcgcaggccgcatgggcggcaccacccagtacacggtgaacaaccagatggtgaacgcca 331

                                                                       
Query: 239 ccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaagg 298
           |||||||||||||||||||   ||||||||||||||||||||| || ||||||| |||||
Sbjct: 332 ccctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaagg 391

                                                                       
Query: 299 aggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctc 358
            ||| ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| |
Sbjct: 392 tggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgc 451

                                                                       
Query: 359 ctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgta 418
           | || ||||| || || || ||||| |||||||||||||| |||||||| |||||||| |
Sbjct: 452 cgctcatccgcgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgca 511

                                   
Query: 419 tcggtgtctgcaagggtatcttcc 442
           |||| || |||||||| |||||||
Sbjct: 512 tcggcgtgtgcaagggcatcttcc 535

---

>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            mRNA
          Length = 1853

 Score =  274 bits (138), Expect = 3e-70
 Identities = 314/370 (84%), Gaps = 2/370 (0%)
 Strand = Plus / Plus

                                                                        
Query: 62   tggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctg 121
            |||| ||||| ||||| ||||| || || ||||| ||||||||  |||||||||| || |
Sbjct: 666  tggaaagtggaaacgcaggagaacccgcgaagctgatcaggcaaaggtaccgtgaagcag 725

                                                                        
Query: 122  cagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacgatcttgacgctggt 180
            | ||||| |||| ||||||||| ||||| ||| |||||||||||||||||||| || || 
Sbjct: 726  ccgacattatcaggaagggtaaaatgtg-tgcactcttcatcaacgatcttgatgcagga 784

                                                                        
Query: 181  gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
            || ||| || | || |||||||| || ||||| ||||||||||| |||||||| ||||||
Sbjct: 785  gctggtcggcttggtggaaccacccaatacactgtcaacaaccaaatggtgaatgccacc 844

                                                                        
Query: 241  ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
            || |||||||| || |||  ||| || ||||| ||||| || || |||||||||||||||
Sbjct: 845  ctcatgaacattgctgataacccgacaaacgtccagcttccaggtatgtacaacaaggag 904

                                                                        
Query: 301  gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
            |||||||||||||| || ||| | |||||||||||||||||||| ||  | |||||||||
Sbjct: 905  gagaacccccgtgtcccaatcattgtcaccggtaacgatttctcaacattgtacgctcct 964

                                                                        
Query: 361  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
            || |||||||| ||||||||||||||||||||||||||||||||||| || || ||||| 
Sbjct: 965  ctcatccgtgacggtcgtatggagaagttctactgggctcccacccgcgaagatcgtatt 1024

                      
Query: 421  ggtgtctgca 430
            || |||||||
Sbjct: 1025 ggagtctgca 1034

---

>gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase pseudogene, partial sequence
          Length = 472

 Score =  268 bits (135), Expect = 2e-68
 Identities = 284/331 (85%), Gaps = 2/331 (0%)
 Strand = Plus / Plus

                                                                       
Query: 71  ggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatga 130
           ||||||||| ||||||||| ||||||||||| ||||| ||||||||||| || || || |
Sbjct: 91  ggaacgctg-agagccagctaagctcatcagacagcg-taccgtgaggcagccgatatca 148

                                                                       
Query: 131 tcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtagga 190
           ||||||||||||| ||||||||| | ||||||||||||||||| |||||||| ||||| |
Sbjct: 149 tcaagaagggtaaaatgtgctgcttgttcatcaacgatcttgatgctggtgcaggtagaa 208

                                                                       
Query: 191 tgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaaca 250
           |||| ||||| || || ||||| |||||||| |||||||| || || || || |||||||
Sbjct: 209 tgggaggaactacacaatacacagtcaacaatcagatggttaatgctacactcatgaaca 268

                                                                       
Query: 251 tcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaaccccc 310
           | || |||  ||| ||||| || || |||||||| |||||| ||||||||||||||||||
Sbjct: 269 ttgctgataacccaaccaatgtccaactccctggaatgtacgacaaggaggagaaccccc 328

                                                                       
Query: 311 gtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtg 370
           ||||||||||| ||||||| || |||||||||||  | || || ||||| || ||||| |
Sbjct: 329 gtgtgcccatcatcgtcacaggaaacgatttctcagcactatatgctccccttatccgcg 388

                                          
Query: 371 atggtcgtatggagaagttctactgggctcc 401
           ||||||||||||| |||||||||||||||||
Sbjct: 389 atggtcgtatggaaaagttctactgggctcc 419

---

>emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase
          Length = 1652

 Score =  244 bits (123), Expect = 3e-61
 Identities = 288/341 (84%), Gaps = 4/341 (1%)
 Strand = Plus / Plus

                                                                        
Query: 90   caagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtg 149
            |||||| ||| | ||| ||||||||||||| || ||| ||||||||||||| ||||||||
Sbjct: 678  caagcttatccgtcagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtg 737

                                                                        
Query: 150  ctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagta 209
             || ||||||||||||||||||||||||||||||||| | ||||| || || || |||||
Sbjct: 738  ttgtctcttcatcaacgatcttgacgctggtgcgggtcgtatgggtggtactactcagta 797

                                                                        
Query: 210  caccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaa 269
            ||| ||||||||||||||||| ||||| || || |||||||| || |||  ||| |||||
Sbjct: 798  cactgtcaacaaccagatggttaacgcaacactcatgaacattgctgataacccaaccaa 857

                                                                        
Query: 270  cgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcac 329
            ||| |||||||| || |||||||||||||| |||||| | ||||| |||||| |   |||
Sbjct: 858  cgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcac 917

                                                                        
Query: 330  cggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagtt 389
             |||||||||||||| ||  | |||| |||||| |||| |||||| ||||||||||||||
Sbjct: 918  tggtaacgatttctccaccttatacggtcctctcatccttgatggacgtatggagaagtt 977

                                                     
Query: 390  ct--actgggctcccacccgtgacgaccgtatcggtgtctg 428
            ||  |||||   || |||||||| |||||||||||||||||
Sbjct: 978  cttgactgg--cccgacccgtgaagaccgtatcggtgtctg 1016

---

>gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds
          Length = 1832

 Score =  236 bits (119), Expect = 7e-59
 Identities = 357/429 (83%), Gaps = 6/429 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
            ||||||||||||||||||||  | || || |||||||||||| ||||||||||| || | 
Sbjct: 762  gtgagcttgtgttcgccaagt-taggaataaaccccatcatg-atgagtgccgg-agaat 818

                                                                        
Query: 61   ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
             |||| ||||| || || ||||||||||| ||| | ||||||||  ||||||||||||| 
Sbjct: 819  -tggaaagtggaaatgcaggagagccagctaagttgatcaggcaaaggtaccgtgaggca 877

                                                                        
Query: 121  gcagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacgatcttgacgctgg 179
            |||||| ||||    |||||||||||||| ||| || |||||||||||||| ||  | ||
Sbjct: 878  gcagacttgattgctaagggtaagatgtg-tgctctattcatcaacgatctggaacccgg 936

                                                                        
Query: 180  tgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccac 239
            ||| ||  | ||||| || ||||| || |||||||| |||||||||||||| ||||||||
Sbjct: 937  tgctggacgtatgggaggcaccacccaatacaccgtaaacaaccagatggttaacgccac 996

                                                                        
Query: 240  cctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaagga 299
             ||  ||||||| || ||   ||| ||||| || || |||||||| |||||||||||| |
Sbjct: 997  actcctgaacattgctgacaacccaaccaatgtccaactccctggtatgtacaacaagca 1056

                                                                        
Query: 300  ggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcc 359
            ||| ||  ||||||| |||||| | || || |||||||||||||| ||  | ||||||||
Sbjct: 1057 ggacaatgcccgtgtccccatcattgttactggtaacgatttctccaccttgtacgctcc 1116

                                                                        
Query: 360  tctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtat 419
             || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1117 ccttatccgtgatggtcgtatggagaagttctactgggctcccacccgtgaggaccgtat 1176

                     
Query: 420  cggtgtctg 428
             ||||||||
Sbjct: 1177 tggtgtctg 1185



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                    
Query: 479  tcgtcgacaccttcccaggacaatccattgactttttcgg 518
            |||| ||| ||||||| |||||||| || |||||||||||
Sbjct: 1236 tcgttgacgccttccctggacaatctatcgactttttcgg 1275

---

>gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, partial cds
          Length = 1063

 Score =  232 bits (117), Expect = 1e-57
 Identities = 355/429 (82%), Gaps = 4/429 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   tgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnagc 61
           ||||||||| || |||||| ||||| ||||||||||||||| |||||||| || || |||
Sbjct: 32  tgagcttgtctttgccaag-atgggaatcaaccccatcatg-atgagtgctgg-ag-agc 87

                                                                       
Query: 62  tggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctg 121
           | || ||||| || || ||||||||||| ||  | ||||| ||| | |||||||| ||  
Sbjct: 88  ttgaaagtggaaatgcaggagagccagcaaaattgatcagacagagataccgtgaagcct 147

                                                                       
Query: 122 cagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtg 181
           | ||||| |||| ||| || |||||||| || || |||||||||||||| || || || |
Sbjct: 148 ctgacattatcaggaaaggaaagatgtgttgtctgttcatcaacgatctcgatgcaggag 207

                                                                       
Query: 182 cgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccc 241
           | ||| | ||||| |||||||| || ||||| ||||||||||| |||||||| ||||| |
Sbjct: 208 caggtcgtatgggtggaaccacacaatacactgtcaacaaccaaatggtgaatgccacac 267

                                                                       
Query: 242 tgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggagg 301
           | |||||||| || |||  ||||||||| || || |||||||| |||||||||||||| |
Sbjct: 268 tcatgaacattgctgataaccccaccaatgtccaactccctggtatgtacaacaaggaag 327

                                                                       
Query: 302 agaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctc 361
           | ||  | |||||||||||| | ||||||||||| |||||||| || || || |||||||
Sbjct: 328 acaatgctcgtgtgcccatcattgtcaccggtaatgatttctcaacactttatgctcctc 387

                                                                       
Query: 362 tgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcg 421
           | |||||||||||||||||||||||||||||||||||||| ||  | || || ||||| |
Sbjct: 388 tcatccgtgatggtcgtatggagaagttctactgggctcctactagagaagatcgtattg 447

                    
Query: 422 gtgtctgca 430
           |||||||||
Sbjct: 448 gtgtctgca 456



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 472 gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 521
           |||||||| || ||||||||||| || |||||||| || || ||||||||
Sbjct: 498 gtcaagattgttgacaccttccctggccaatccatcgatttcttcggtgc 547

---

>gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1) mRNA, complete cds
          Length = 1627

 Score =  232 bits (117), Expect = 1e-57
 Identities = 370/449 (82%), Gaps = 4/449 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
            |||||||||| || |||||| ||||| ||||||||||||||| |||||||| || || ||
Sbjct: 598  gtgagcttgtctttgccaag-atgggaatcaaccccatcatg-atgagtgctgg-ag-ag 653

                                                                        
Query: 61   ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
             |||| ||||| || || ||||||||||| ||  | || |||||| | |||||||| || 
Sbjct: 654  ttggaaagtggaaatgccggagagccagcaaaattgattaggcagagataccgtgaagcc 713

                                                                        
Query: 121  gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 180
             ||||| | ||||||||||| ||||||||    || |||||||| |||||||| || || 
Sbjct: 714  tcagacttaatcaagaagggaaagatgtgtgttctgttcatcaatgatcttgatgcagga 773

                                                                        
Query: 181  gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
            || ||| |  | || |||||||| || ||||| || ||||||||||||||||| ||||| 
Sbjct: 774  gcaggtcgtcttggtggaaccacccaatacactgtgaacaaccagatggtgaatgccact 833

                                                                        
Query: 241  ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
            || |||||||| || |||  |||||| || |||||||| ||||| |||||||||||||| 
Sbjct: 834  ctcatgaacattgctgataaccccacaaatgtgcagcttcctggtatgtacaacaaggaa 893

                                                                        
Query: 301  gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
            || ||| |||||||||||||| | ||||| |||||||||||||| || || || ||||||
Sbjct: 894  gataacgcccgtgtgcccatcattgtcactggtaacgatttctcaacactttatgctcct 953

                                                                        
Query: 361  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
            || ||||||||||||||||||||||||||||||||||| || ||  | || ||||| || 
Sbjct: 954  ctcatccgtgatggtcgtatggagaagttctactgggcaccaacaagggaagaccgcatt 1013

                                         
Query: 421  ggtgtctgcaagggtatcttccagaccga 449
            ||||| |||||||| || |||| ||||||
Sbjct: 1014 ggtgtttgcaagggaattttccggaccga 1042

---

>gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/oxygenase activase
            {alternatively spliced} [spinach, Genomic, 3691 nt]
          Length = 3691

 Score =  230 bits (116), Expect = 4e-57
 Identities = 307/368 (83%), Gaps = 2/368 (0%)
 Strand = Plus / Plus

                                                                        
Query: 62   tggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctg 121
            |||| ||||| || || ||||||||||| ||| | ||||||||  ||||||||||||| |
Sbjct: 2447 tggaaagtggaaatgcaggagagccagctaagttgatcaggcaaaggtaccgtgaggcag 2506

                                                                        
Query: 122  cagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacgatcttgacgctggt 180
            ||||| ||||    |||||||||||||| ||| || |||||||||||||| ||  | |||
Sbjct: 2507 cagacttgattgctaagggtaagatgtg-tgctctattcatcaacgatctggaacccggt 2565

                                                                        
Query: 181  gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
            || ||  | ||||| || ||||| || |||||||| |||||||||||||| |||||||| 
Sbjct: 2566 gctggacgtatgggaggcaccacccaatacaccgtaaacaaccagatggttaacgccaca 2625

                                                                        
Query: 241  ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
            || |||||||| || ||   ||| ||||| || || |||||||| |||||||||||| ||
Sbjct: 2626 ctcatgaacattgctgacaacccaaccaatgtccaactccctggtatgtacaacaagcag 2685

                                                                        
Query: 301  gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
            || ||  ||||||| |||||| | || || |||||||||||||| ||  | |||||||| 
Sbjct: 2686 gacaatgcccgtgtccccatcattgttactggtaacgatttctccaccttgtacgctccc 2745

                                                                        
Query: 361  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
            || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| 
Sbjct: 2746 cttatccgtgatggtcgtatggagaagttctactgggctcccacccgtgaggaccgtatt 2805

                    
Query: 421  ggtgtctg 428
            ||||||||
Sbjct: 2806 ggtgtctg 2813



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    gtgagcttgtgttcgccaag 20
            ||||||||||||||||||||
Sbjct: 2295 gtgagcttgtgttcgccaag 2314

---

>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1724

 Score =  228 bits (115), Expect = 2e-56
 Identities = 356/431 (82%), Gaps = 4/431 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
            |||| ||||| || |||||| ||||| ||||||||||||||| |||||||| || || ||
Sbjct: 593  gtgaacttgtttttgccaag-atgggaatcaaccccatcatg-atgagtgctgg-ag-ag 648

                                                                        
Query: 61   ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
            ||||| ||||| || || |||||||| || ||||| ||||||||  |||| ||||| || 
Sbjct: 649  ctggaaagtggaaatgcaggagagcccgcaaagctgatcaggcaaaggtatcgtgaagca 708

                                                                        
Query: 121  gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 180
            || || || ||||||||||| || ||||||||||| || ||||||||||| || || || 
Sbjct: 709  gctgatatcatcaagaagggaaaaatgtgctgcctgtttatcaacgatctcgatgccgga 768

                                                                        
Query: 181  gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
            || ||| | ||||| ||||| || || ||||| || ||||| ||||||||||| ||||||
Sbjct: 769  gctggtcgtatgggtggaacaactcaatacactgttaacaatcagatggtgaatgccacc 828

                                                                        
Query: 241  ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
            || |||||||| || ||   ||| || || || ||||| |||||||||||||||||||| 
Sbjct: 829  ctcatgaacatagctgacaacccaacaaatgtccagcttcctggcatgtacaacaaggaa 888

                                                                        
Query: 301  gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
            |||||||| ||||| |||||| | ||||| |||||||| ||||| ||  | || || |||
Sbjct: 889  gagaaccctcgtgttcccatcattgtcactggtaacgacttctcaacattgtatgcccct 948

                                                                        
Query: 361  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
            || ||||||||||| ||||||||||| ||||||||||| |||||| | || |||||||| 
Sbjct: 949  cttatccgtgatggccgtatggagaaattctactgggcacccaccagggaggaccgtatt 1008

                       
Query: 421  ggtgtctgcaa 431
            |||||||||||
Sbjct: 1009 ggtgtctgcaa 1019

---

>gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA, complete cds; nuclear
           gene for chloroplast product
          Length = 1671

 Score =  228 bits (115), Expect = 2e-56
 Identities = 334/399 (83%), Gaps = 6/399 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
           |||||||||| || |||||| ||||| ||||||||||||||| |||||||| || || ||
Sbjct: 602 gtgagcttgtctttgccaag-atgggaatcaaccccatcatg-atgagtgctgg-ag-ag 657

                                                                       
Query: 61  ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
            |||| ||||| || || ||||||||||| ||  | ||||||||| | |||||||| |||
Sbjct: 658 ttggaaagtggaaatgccggagagccagcaaaattgatcaggcagagataccgtgaagct 717

                                                                       
Query: 121 gcagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacgatcttgacgctgg 179
           |||||  |||||   ||||| |||||||| ||| || ||||||||||||||||| || ||
Sbjct: 718 gcagatttgatcgccaagggaaagatgtg-tgctctattcatcaacgatcttgatgcagg 776

                                                                       
Query: 180 tgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccac 239
            || ||| |  | || |||||||| || ||||| || ||||||||||||||||| |||||
Sbjct: 777 agcaggtcgtcttggtggaaccacccaatacactgtgaacaaccagatggtgaatgccac 836

                                                                       
Query: 240 cctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaagga 299
            || |||||||| || |||  ||| || || |||||||| ||||| ||||||||||||||
Sbjct: 837 tctcatgaacattgctgataaccctacaaatgtgcagcttcctggtatgtacaacaagga 896

                                                                       
Query: 300 ggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcc 359
            |||||| |||||||||||||| | ||||||||||| |||||||| ||||| || |||||
Sbjct: 897 agagaacgcccgtgtgcccatcattgtcaccggtaatgatttctcaacgctgtatgctcc 956

                                                  
Query: 360 tctgatccgtgatggtcgtatggagaagttctactgggc 398
           ||| || |||||||| |||||||||||||||||||||||
Sbjct: 957 tctcattcgtgatgggcgtatggagaagttctactgggc 995

---

>gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precursor, mRNA, complete cds
          Length = 1634

 Score =  226 bits (114), Expect = 7e-56
 Identities = 363/441 (82%), Gaps = 4/441 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtgagcttgtgttcgccaagnatgggcatcaaccccatcatgnatgagtgccggnagnag 60
            |||||||||| || |||||| ||||| ||||||||||||||| ||||||||||| || | 
Sbjct: 609  gtgagcttgtctttgccaag-atgggaatcaaccccatcatg-atgagtgccgg-agaat 665

                                                                        
Query: 61   ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 120
             ||||||| || ||||| |||||||| || ||| | |||||||| ||||  |||||||| 
Sbjct: 666  -tggagagcggcaacgcaggagagcccgcgaagttgatcaggcaacggtgtcgtgaggcg 724

                                                                        
Query: 121  gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 180
            || ||||| ||||||||||| |||||||  ||||| || ||||| |||||||| || |||
Sbjct: 725  gccgacatcatcaagaagggaaagatgtcttgcctatttatcaatgatcttgatgcaggt 784

                                                                        
Query: 181  gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 240
            || |||||| | || || || || || ||||| || |||||||| |||||||| || |||
Sbjct: 785  gccggtaggcttggtgggacaactcaatacactgtgaacaaccaaatggtgaatgctacc 844

                                                                        
Query: 241  ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 300
            || |||||||| || ||    || ||||| || |||||||| || |||||||||||||| 
Sbjct: 845  ctcatgaacattgctgacaatccaaccaatgttcagctcccgggtatgtacaacaaggaa 904

                                                                        
Query: 301  gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 360
            ||||| || ||||| || ||| ||||||| ||||| || ||||||||  | |||||||||
Sbjct: 905  gagaatccacgtgtaccgatcatcgtcacaggtaatgacttctcgacattgtacgctcct 964

                                                                        
Query: 361  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 420
            || || |||||||||||||||||||| ||||||||||| |||||| | || ||||| || 
Sbjct: 965  ctcattcgtgatggtcgtatggagaaattctactgggcgcccaccagagaagaccgaatt 1024

                                 
Query: 421  ggtgtctgcaagggtatcttc 441
            ||||||||||  |||||||||
Sbjct: 1025 ggtgtctgcactggtatcttc 1045

---

>emb|Y10657.1|CLRCAGENE C.littorale rca gene
          Length = 2513

 Score =  218 bits (110), Expect = 2e-53
 Identities = 317/386 (82%)
 Strand = Plus / Plus

                                                                        
Query: 59   agctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgagg 118
            ||||||||  ||| ||||| || ||||| |||||||||||| | ||||| ||||| ||||
Sbjct: 1476 agctggagtctggtaacgccggtgagcccgccaagctcatccgccagcgctaccgcgagg 1535

                                                                        
Query: 119  ctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctg 178
            || | ||||   | |||||||| |||||||||| |||||||||||||||||| |||||||
Sbjct: 1536 cttccgacagcgtgaagaagggcaagatgtgctccctcttcatcaacgatctggacgctg 1595

                                                                        
Query: 179  gtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcca 238
            |||| ||  | ||||||     ||| |||||||| ||||||||||||||||| ||||| |
Sbjct: 1596 gtgctggccgcatgggcatgggcacccagtacactgtcaacaaccagatggtcaacgcta 1655

                                                                        
Query: 239  ccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaagg 298
            |||| ||||||||||| |||  ||| |||||||||||||| || ||| |||||||  |||
Sbjct: 1656 ccctcatgaacatcgctgataaccctaccaacgtgcagctgcccggcgtgtacaaggagg 1715

                                                                        
Query: 299  aggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctc 358
             | |||  |||||||| ||||| |||  ||| |||||||||||||| || || ||||| |
Sbjct: 1716 tgcagattccccgtgttcccattgtctgcacgggtaacgatttctccaccctgtacgccc 1775

                                                                        
Query: 359  ctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgta 418
            | || |||||||| || || |||||||||| |||||||   ||||||||||| ||||| |
Sbjct: 1776 ccctcatccgtgacggccgcatggagaagtactactggaaccccacccgtgaggaccgca 1835

                                      
Query: 419  tcggtgtctgcaagggtatcttccag 444
            |||| ||||||| ||| |||||||||
Sbjct: 1836 tcggcgtctgcatgggaatcttccag 1861

---

>gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precursor, gene, partial cds
          Length = 1216

 Score =  206 bits (104), Expect = 6e-50
 Identities = 311/380 (81%)
 Strand = Plus / Plus

                                                                       
Query: 62  tggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctg 121
           ||||||| || ||||| |||||||| || ||| | |||||||| ||||  |||||||| |
Sbjct: 493 tggagagcggcaacgcaggagagcccgcgaagttgatcaggcaacggtgtcgtgaggcgg 552

                                                                       
Query: 122 cagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtg 181
           | ||||| ||||||||||| |||||||  ||||| || ||||| |||||||| || ||||
Sbjct: 553 ccgacatcatcaagaagggaaagatgtcttgcctatttatcaatgatcttgatgcaggtg 612

                                                                       
Query: 182 cgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccc 241
           | |||||| | || || || || || ||||| || |||||||| |||||||| || ||||
Sbjct: 613 ccggtaggcttggtgggacaactcaatacactgtgaacaaccaaatggtgaatgctaccc 672

                                                                       
Query: 242 tgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggagg 301
           | |||||||| || ||    || ||||| || |||||||| || |||||||||||||| |
Sbjct: 673 tcatgaacattgctgacaatccaaccaatgttcagctcccgggtatgtacaacaaggaag 732

                                                                       
Query: 302 agaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctc 361
           |||| || ||||| || ||| ||||||| ||||| || ||||||||  | ||||||||||
Sbjct: 733 agaatccacgtgtaccgatcatcgtcacaggtaatgacttctcgacattgtacgctcctc 792

                                                                       
Query: 362 tgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcg 421
           | || |||||||||||||||||||| ||||||||||| |||||| | || ||||| || |
Sbjct: 793 tcattcgtgatggtcgtatggagaaattctactgggcgcccaccagagaagaccgaattg 852

                               
Query: 422 gtgtctgcaagggtatcttc 441
           |||||||||  |||||||||
Sbjct: 853 gtgtctgcactggtatcttc 872

---

>emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphate carboxylase activase
           (pTA1.1)
          Length = 1011

 Score =  186 bits (94), Expect = 6e-44
 Identities = 307/378 (81%)
 Strand = Plus / Plus

                                                                       
Query: 145 atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 204
           ||||| |||||||||||||||||||| || || || || ||||| ||||| ||||| || 
Sbjct: 55  atgtgttgcctcttcatcaacgatctcgatgcaggagctggtagaatgggtggaactacc 114

                                                                       
Query: 205 cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 264
           || ||||| |||||||||||||||||||| ||||| || ||||||||||| |||  ||| 
Sbjct: 115 caatacactgtcaacaaccagatggtgaatgccactctcatgaacatcgctgataacccg 174

                                                                       
Query: 265 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 324
           || || || |||||||| || |||||||||||| | |||||| || | || |||||  | 
Sbjct: 175 acaaatgtccagctccccggtatgtacaacaagcaagagaacgccagggtccccattatt 234

                                                                       
Query: 325 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 384
           ||||| |||||||| ||||| ||  | || |||||||| |||||||||||||||||||||
Sbjct: 235 gtcactggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtatggag 294

                                                                       
Query: 385 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 444
           |||||||| ||||| || ||  | || ||  | || ||||| ||||||||||| |||  |
Sbjct: 295 aagttctattgggcaccaactagggaagatagaattggtgtttgcaagggtattttcagg 354

                                                                       
Query: 445 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 504
           |||||||| ||   ||| ||  |||| || ||||| ||||| |||||||| |||||||| 
Sbjct: 355 accgacaacgtgcctgaggaagctgttgtaaagattgtcgataccttccctggacaatct 414

                             
Query: 505 attgactttttcggtgct 522
           |||||||| || ||||||
Sbjct: 415 attgacttctttggtgct 432

---

>gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bisphosphate carboxylase
           activase (Rca) gene, partial sequence
          Length = 648

 Score =  182 bits (92), Expect = 9e-43
 Identities = 209/248 (84%)
 Strand = Plus / Plus

                                                                       
Query: 209 acaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacca 268
           |||| ||||||||||||||||| ||||||||||| |||||||| || ||   ||| ||||
Sbjct: 1   acactgtcaacaaccagatggttaacgccaccctcatgaacattgctgacaacccaacca 60

                                                                       
Query: 269 acgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtca 328
           | || ||||||||||| |||||||||||| |||| ||  | ||||| |||||| |||| |
Sbjct: 61  atgtccagctccctggtatgtacaacaagcaggacaatgctcgtgtacccatcatcgtta 120

                                                                       
Query: 329 ccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagt 388
           | |||||||| ||||| ||  | || |||||||| ||||||||||||||||||||||| |
Sbjct: 121 ctggtaacgacttctctaccttgtatgctcctctcatccgtgatggtcgtatggagaaat 180

                                                                       
Query: 389 tctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccg 448
           |||||||||| ||||| ||||| |||||||| ||||| ||||  |||||||||  ||| |
Sbjct: 181 tctactgggcacccactcgtgaggaccgtattggtgtttgcactggtatcttcaggactg 240

                   
Query: 449 acaatgtc 456
           ||||||||
Sbjct: 241 acaatgtc 248

---

>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase
           activase mRNA, complete cds
          Length = 1693

 Score =  176 bits (89), Expect = 6e-41
 Identities = 263/321 (81%)
 Strand = Plus / Plus

                                                                       
Query: 124 gacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcg 183
           ||||| |||||||||||    |||||||  || |||||||||||||| ||||| ||||| 
Sbjct: 612 gacatcatcaagaagggccgcatgtgctcgctgttcatcaacgatctggacgccggtgcc 671

                                                                       
Query: 184 ggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctg 243
           ||  | |||||||  ||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 672 ggccgcatgggcgacaccacccagtacaccgtgaacaaccagatggtgaacgccaccctg 731

                                                                       
Query: 244 atgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggag 303
           ||||||||||||||   ||| |||||||| ||||| || ||  ||||||| || ||||||
Sbjct: 732 atgaacatcgccgacaacccgaccaacgtccagctgcccggtgtgtacaagaacgaggag 791

                                                                       
Query: 304 aacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctg 363
           | ||| || |||||||| ||   ||| || ||||| ||||| || || ||||| || |||
Sbjct: 792 atccctcgcgtgcccattgtgtgcacgggcaacgacttctccaccctgtacgcgcccctg 851

                                                                       
Query: 364 atccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggt 423
           ||||| ||||| || |||||||||| |||||||   |||||||| || ||||| ||||| 
Sbjct: 852 atccgcgatggccgcatggagaagtactactggaaccccacccgcgaggaccgcatcggc 911

                                
Query: 424 gtctgcaagggtatcttccag 444
           || |||| ||| |||||||||
Sbjct: 912 gtgtgcatgggcatcttccag 932



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 54/63 (85%), Gaps = 1/63 (1%)
 Strand = Plus / Plus

                                                                        
Query: 484  gacaccttcccaggacaatccattgactttttcggtgcttctgcgtgctcgggtgtacga 543
            ||||||||||| || || ||||||||||| ||||| ||  |||||||| || ||||||||
Sbjct: 972  gacaccttccccggccagtccattgacttcttcggcgc-cctgcgtgcccgcgtgtacga 1030

               
Query: 544  cga 546
            |||
Sbjct: 1031 cga 1033

---

>gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase mRNA, complete cds
          Length = 1656

 Score =  170 bits (86), Expect = 3e-39
 Identities = 212/254 (83%)
 Strand = Plus / Plus

                                                                       
Query: 145 atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 204
           ||||| || ||||||||||||||||| || || || || ||||| ||||| ||||| || 
Sbjct: 710 atgtgttgtctcttcatcaacgatctcgatgcaggagctggtagaatgggtggaactacc 769

                                                                       
Query: 205 cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 264
           || |||||||||||||||||||||||||| |||||||| |||||||| || ||   ||| 
Sbjct: 770 caatacaccgtcaacaaccagatggtgaatgccaccctcatgaacattgctgacaaccca 829

                                                                       
Query: 265 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 324
           || || || |||||||| || |||||||||||| | |||||| || | || |||||  | 
Sbjct: 830 acaaatgtccagctccccggtatgtacaacaagcaagagaacgccagggtacccattatt 889

                                                                       
Query: 325 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 384
           ||||| |||||||| ||||| ||  | || |||||||| |||||||||||||||||||||
Sbjct: 890 gtcactggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtatggag 949

                         
Query: 385 aagttctactgggc 398
           ||||||||||||||
Sbjct: 950 aagttctactgggc 963

---

>emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphosphate carboxylase activase
           (pJQ4)
          Length = 1655

 Score =  167 bits (84), Expect = 5e-38
 Identities = 207/248 (83%)
 Strand = Plus / Plus

                                                                       
Query: 151 tgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtac 210
           |||||||||||||||||||| || || || || ||||| ||||| ||||| || || |||
Sbjct: 705 tgcctcttcatcaacgatctcgatgcaggagctggtagaatgggtggaactacccaatac 764

                                                                       
Query: 211 accgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaac 270
           || |||||||||||||||||||| ||||| || |||||||| || |||  ||| || |||
Sbjct: 765 actgtcaacaaccagatggtgaatgccactctcatgaacattgctgataacccgacaaac 824

                                                                       
Query: 271 gtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcacc 330
           || |||||||| || |||||||||||| | |||||| || | || |||||  | ||||| 
Sbjct: 825 gtccagctccccggtatgtacaacaagcaagagaacgccagagtccccattattgtcact 884

                                                                       
Query: 331 ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 390
           |||||||| ||||| ||  | || |||||||| |||||||||||||||||||||||||||
Sbjct: 885 ggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtatggagaagttc 944

                   
Query: 391 tactgggc 398
           || |||||
Sbjct: 945 tattgggc 952

---

>gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precursor (Rca) mRNA, complete
           cds
          Length = 1674

 Score =  161 bits (81), Expect = 3e-36
 Identities = 273/337 (81%)
 Strand = Plus / Plus

                                                                       
Query: 62  tggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctg 121
           |||| ||||| || || ||||||||||||||| | || |||||  ||||| | || || |
Sbjct: 646 tggaaagtggaaatgcaggagagccagccaagttgattaggcaaaggtacagagaagcag 705

                                                                       
Query: 122 cagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtg 181
           |||| || ||||  ||||| || ||||| |||||||||||||||||||| || || || |
Sbjct: 706 cagaaatcatcagaaagggaaatatgtgttgcctcttcatcaacgatctcgatgcaggag 765

                                                                       
Query: 182 cgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccc 241
           | ||||| ||||| ||||| || || ||||| ||||||||||| |||||||| ||||| |
Sbjct: 766 ctggtagaatgggtggaactacccaatacactgtcaacaaccaaatggtgaatgccactc 825

                                                                       
Query: 242 tgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggagg 301
           | |||||||| || ||   ||| || || || |||||||| || |||||||||||| | |
Sbjct: 826 tcatgaacattgctgacaacccgacaaatgtccagctccccggtatgtacaacaagcaag 885

                                                                       
Query: 302 agaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctc 361
           ||||  || | || || ||  ||||||| |||||||||||||| ||  | || ||||| |
Sbjct: 886 agaatgccagggtccctattatcgtcactggtaacgatttctccacattgtatgctccac 945

                                                
Query: 362 tgatccgtgatggtcgtatggagaagttctactgggc 398
           | |||||||||||||||||||||||||||||||||||
Sbjct: 946 ttatccgtgatggtcgtatggagaagttctactgggc 982

---

>emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putative rubisco
           activase (rba1 gene)
          Length = 321

 Score =  147 bits (74), Expect = 5e-32
 Identities = 102/110 (92%), Gaps = 1/110 (0%)
 Strand = Plus / Plus

                                                                       
Query: 508 gactttttcggtgcttctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcgg 567
           ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||   
Sbjct: 2   gactttttcggtgct-ctgcgtgctcgggtgtacgacgacgaggtgcgcaagtgggtgac 60

                                                             
Query: 568 ctctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacg 617
           ||||||||| ||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 61  ctctaccggtatcgagaacattggcaagaagcttgtgaactcgcgggacg 110

---

>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence
          Length = 1519

 Score =  143 bits (72), Expect = 8e-31
 Identities = 258/320 (80%)
 Strand = Plus / Plus

                                                                       
Query: 79  ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 138
           ||||||||||| ||  | ||||||||  ||||| | ||||| || || || |||| ||||
Sbjct: 680 ggagagccagctaaattgatcaggcaaaggtacagagaggccgcggaaatcatcaggaag 739

                                                                       
Query: 139 ggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcgga 198
           || || ||||| ||||||||||||||||||||||| || || || ||||| ||||| |||
Sbjct: 740 ggaaacatgtgttgcctcttcatcaacgatcttgatgcaggagccggtagaatgggtgga 799

                                                                       
Query: 199 accacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgat 258
           || || || ||||| ||||||||||| |||||||| || || || |||||||| || |||
Sbjct: 800 actacacaatacactgtcaacaaccaaatggtgaatgctacactcatgaacattgctgat 859

                                                                       
Query: 259 gcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgccc 318
             ||| || || || || ||||| || |||||||||||| | |||||  || | || || 
Sbjct: 860 aacccgacgaatgtccaactccccggtatgtacaacaagcaagagaatgccagggtacct 919

                                                                       
Query: 319 atcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgt 378
           ||  | ||||| |||||||||||||| ||  | || || ||||| |||||||||||||||
Sbjct: 920 attattgtcactggtaacgatttctccacattgtatgcacctcttatccgtgatggtcgt 979

                               
Query: 379 atggagaagttctactgggc 398
           |||||||| |||||||||||
Sbjct: 980 atggagaaattctactgggc 999



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                               
Query: 472  gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgct 522
            |||||||||||||| | |||||| |||||||| ||||| || |||||||||
Sbjct: 1073 gtcaagatcgtcgatagcttccctggacaatctattgatttcttcggtgct 1123

---

>gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence
          Length = 253

 Score =  133 bits (67), Expect = 8e-28
 Identities = 124/143 (86%)
 Strand = Plus / Plus

                                                                       
Query: 288 gtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgac 347
           ||||||||| || |||||||||||||||||| || | ||||||||||| |||||||| ||
Sbjct: 1   gtacaacaaagaagagaacccccgtgtgcccgtcattgtcaccggtaatgatttctccac 60

                                                                       
Query: 348 gctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccg 407
             | || ||||| || ||||||||||||||||||||||| ||||||||||| || |||||
Sbjct: 61  cttgtatgctccccttatccgtgatggtcgtatggagaaattctactgggcaccaacccg 120

                                  
Query: 408 tgacgaccgtatcggtgtctgca 430
            ||||| ||||| ||||||||||
Sbjct: 121 cgacgatcgtattggtgtctgca 143

---

>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds
          Length = 4500

 Score =  123 bits (62), Expect = 7e-25
 Identities = 116/134 (86%)
 Strand = Plus / Plus

                                                                        
Query: 124  gacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcg 183
            ||||| |||||||||||    |||||||  || |||||||||||||| ||||| ||||| 
Sbjct: 1824 gacatcatcaagaagggccgcatgtgctcgctgttcatcaacgatctggacgccggtgcc 1883

                                                                        
Query: 184  ggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctg 243
            ||  | |||||||  ||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 1884 ggccgcatgggcgacaccacccagtacaccgtgaacaaccagatggtgaacgccaccctg 1943

                          
Query: 244  atgaacatcgccga 257
            ||||||||||||||
Sbjct: 1944 atgaacatcgccga 1957



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 54/63 (85%), Gaps = 1/63 (1%)
 Strand = Plus / Plus

                                                                        
Query: 484  gacaccttcccaggacaatccattgactttttcggtgcttctgcgtgctcgggtgtacga 543
            ||||||||||| || || ||||||||||| ||||| ||  |||||||| || ||||||||
Sbjct: 2662 gacaccttccccggccagtccattgacttcttcggcgc-cctgcgtgcccgcgtgtacga 2720

               
Query: 544  cga 546
            |||
Sbjct: 2721 cga 2723

---

>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence
          Length = 108028

 Score =  119 bits (60), Expect = 1e-23
 Identities = 279/352 (79%)
 Strand = Plus / Minus

                                                                        
Query: 62   tggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctg 121
            |||| ||||| || || |||||||| || ||| | || |||||  |||||||||||||  
Sbjct: 7243 tggaaagtggaaatgcaggagagcctgcaaagttgattaggcaaaggtaccgtgaggcgt 7184

                                                                        
Query: 122  cagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtg 181
            | ||||| ||||  || || ||||||||||| ||||||||||| |||||||| || || |
Sbjct: 7183 ccgacattatcagaaaaggaaagatgtgctgtctcttcatcaatgatcttgatgcaggag 7124

                                                                        
Query: 182  cgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccc 241
            | ||||| ||||| || || || || ||||| ||||||||||||||||| || || ||||
Sbjct: 7123 ctggtagaatgggtggcactactcaatacacagtcaacaaccagatggtaaatgcaaccc 7064

                                                                        
Query: 242  tgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggagg 301
            | |||||||| || ||   ||| ||||| || || || || || ||||||||||| || |
Sbjct: 7063 tcatgaacattgctgacaaccctaccaatgttcaacttcccggtatgtacaacaaagaag 7004

                                                                        
Query: 302  agaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctc 361
            ||||  |||| || || ||| ||||||| || || || ||||| ||| | || |||||| 
Sbjct: 7003 agaatgcccgcgtccctatcatcgtcactggcaatgacttctctacgttgtatgctcctt 6944

                                                                
Query: 362  tgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacga 413
            | || |||||||| |||||||| || ||||||||||| || || ||||||||
Sbjct: 6943 taattcgtgatggacgtatggaaaaattctactgggcacctactcgtgacga 6892

---

>emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosphate carboxyase activase
           (pJQ11)
          Length = 883

 Score =  117 bits (59), Expect = 4e-23
 Identities = 176/215 (81%)
 Strand = Plus / Plus

                                                                       
Query: 184 ggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctg 243
           ||||| ||||| ||||| || || ||||| ||||||||||| |||||||| ||||| || 
Sbjct: 8   ggtagaatgggtggaactacccaatacactgtcaacaaccaaatggtgaatgccactctc 67

                                                                       
Query: 244 atgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggag 303
           |||||||| || ||   ||| || || || |||||||| || |||||||||||| | |||
Sbjct: 68  atgaacattgctgacaacccgacaaatgtccagctccccggtatgtacaacaagcaagag 127

                                                                       
Query: 304 aacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctg 363
           ||  || | || || ||  ||||||| |||||||||||||| ||  | || ||||| || 
Sbjct: 128 aatgccagggtccctattatcgtcactggtaacgatttctccacattgtatgctccactt 187

                                              
Query: 364 atccgtgatggtcgtatggagaagttctactgggc 398
           |||||||||||||||||||||||||||||||||||
Sbjct: 188 atccgtgatggtcgtatggagaagttctactgggc 222



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 472 gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 521
           |||||||| || || | |||||| |||||||| || ||||||||||||||
Sbjct: 296 gtcaagattgttgataacttccctggacaatctatcgactttttcggtgc 345

---

>emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase
          Length = 2031

 Score =  105 bits (53), Expect = 2e-19
 Identities = 278/353 (78%)
 Strand = Plus / Plus

                                                                        
Query: 67   agtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagac 126
            |||||||| || ||||||||||| ||  | ||||||||  | ||| | ||||| || || 
Sbjct: 666  agtgggaatgcaggagagccagcaaaattgatcaggcaaagatacagagaggcagctgat 725

                                                                        
Query: 127  atgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggt 186
            || |||||||| || || ||||| || || || |||||||||||||| ||||| || || 
Sbjct: 726  atcatcaagaaagggaaaatgtgttgtctatttatcaacgatcttgatgctggagctgga 785

                                                                        
Query: 187  aggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatg 246
            ||| | || || || || |||||||| || || ||||||||||| || || || || |||
Sbjct: 786  aggcttggtgggactacccagtacacagtgaataaccagatggtaaatgctactcttatg 845

                                                                        
Query: 247  aacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaac 306
            ||||| || ||   ||| ||||| |||||||| || |||||||| |||||||| || || 
Sbjct: 846  aacattgctgacaacccaaccaatgtgcagctaccaggcatgtataacaaggaagaaaat 905

                                                                        
Query: 307  ccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatc 366
            ||| | || |||||| | || || |||||||| ||||| ||| | || || ||||| || 
Sbjct: 906  cccagagttcccatcatagtaactggtaacgacttctcaacgttatatgcacctctcatt 965

                                                                 
Query: 367  cgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtat 419
            ||||||||||| ||||| || |||||||||||||| || ||||| || |||||
Sbjct: 966  cgtgatggtcggatggataaattctactgggctccaactcgtgaagatcgtat 1018



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                       
Query: 481  gtcgacaccttcccaggacaatccattgactttttcggtgctt 523
            |||||||||||||||||||| || || ||||| || |||||||
Sbjct: 1080 gtcgacaccttcccaggacagtcaatagacttctttggtgctt 1122

---

>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 67/74 (90%)
 Strand = Plus / Minus

                                                                          
Query: 205    cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 264
              |||||||||||||||| |||  |||||| ||||||||||||||||||||||||   ||||
Sbjct: 445720 cagtacaccgtcaacacccaactggtgagcgccaccctgatgaacatcgccgacaacccc 445661

                            
Query: 265    accaacgtgcagct 278
              ||||||||||||||
Sbjct: 445660 accaacgtgcagct 445647

---

>emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubisco activase (rca gene)
          Length = 678

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 155/192 (80%)
 Strand = Plus / Plus

                                                                       
Query: 205 cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 264
           |||||||| || |||||||||||||| || |||||||| |||||||| || |||  ||| 
Sbjct: 487 cagtacactgtgaacaaccagatggtcaatgccaccctcatgaacattgctgataaccca 546

                                                                       
Query: 265 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 324
           || || || ||| | ||||| |||||||||||||| || || || ||||| || || || 
Sbjct: 547 acgaatgttcagttgcctggaatgtacaacaaggaagaaaatcctcgtgttccaattgtt 606

                                                                       
Query: 325 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 384
           || || || || |||||||| ||  | || |||||  |||| |||||||| |||||||||
Sbjct: 607 gtgacaggaaatgatttctcaactttgtatgctccattgattcgtgatgggcgtatggag 666

                       
Query: 385 aagttctactgg 396
           ||||||||||||
Sbjct: 667 aagttctactgg 678

---

>gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete sequence
          Length = 105218

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 199/254 (78%)
 Strand = Plus / Minus

                                                                          
Query: 145    atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 204
              ||||| || |||||||| ||||||||||| || || || ||| | ||||| ||||| || 
Sbjct: 104078 atgtgttgtctcttcataaacgatcttgatgcaggagccggtcgtatgggtggaacaaca 104019

                                                                          
Query: 205    cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 264
              |||||||| || ||||| || ||||| || || || || |||||||| || |||  ||| 
Sbjct: 104018 cagtacacagtgaacaatcaaatggtaaatgcaacacttatgaacattgctgataaccca 103959

                                                                          
Query: 265    accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 324
              || || || || || ||||| ||||| ||||| || |||||  | |||||||| ||| | 
Sbjct: 103958 acaaatgttcaacttcctggtatgtataacaaagaagagaatgcacgtgtgcctatcatt 103899

                                                                          
Query: 325    gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 384
              || || ||||| ||||| || ||  | || |||||||| || ||||| ||||||||||||
Sbjct: 103898 gttactggtaatgatttttcaacattgtatgctcctcttattcgtgacggtcgtatggag 103839

                            
Query: 385    aagttctactgggc 398
              || ||||| |||||
Sbjct: 103838 aaattctattgggc 103825

---

>gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete sequence
          Length = 163160

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 199/254 (78%)
 Strand = Plus / Minus

                                                                         
Query: 145   atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 204
             ||||| || |||||||| ||||||||||| || || || ||| | ||||| ||||| || 
Sbjct: 83103 atgtgttgtctcttcataaacgatcttgatgcaggagccggtcgtatgggtggaacaaca 83044

                                                                         
Query: 205   cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 264
             |||||||| || ||||| || ||||| || || || || |||||||| || |||  ||| 
Sbjct: 83043 cagtacacagtgaacaatcaaatggtaaatgcaacacttatgaacattgctgataaccca 82984

                                                                         
Query: 265   accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 324
             || || || || || ||||| ||||| ||||| || |||||  | |||||||| ||| | 
Sbjct: 82983 acaaatgttcaacttcctggtatgtataacaaagaagagaatgcacgtgtgcctatcatt 82924

                                                                         
Query: 325   gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 384
             || || ||||| ||||| || ||  | || |||||||| || ||||| ||||||||||||
Sbjct: 82923 gttactggtaatgatttttcaacattgtatgctcctcttattcgtgacggtcgtatggag 82864

                           
Query: 385   aagttctactgggc 398
             || ||||| |||||
Sbjct: 82863 aaattctattgggc 82850

---

>gb|AY845069.1| Olea europaea clone SRAP-12 SRAP marker genomic sequence
          Length = 262

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 136/170 (80%)
 Strand = Plus / Plus

                                                                       
Query: 136 aagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggc 195
           ||||| ||||||||   |||||||||||| |||||||| || || || |||||  | || 
Sbjct: 19  aaggggaagatgtgtgtcctcttcatcaatgatcttgatgcaggggctggtagacttggt 78

                                                                       
Query: 196 ggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgcc 255
           ||||| || || || || ||||| |||||||||||||| || ||||| |||||||| || 
Sbjct: 79  ggaactacacaatatacagtcaataaccagatggtgaatgcaacccttatgaacattgct 138

                                                             
Query: 256 gatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaa 305
           |||   || || || || ||||||||||| |||||||||||  |||||||
Sbjct: 139 gataatccaactaatgttcagctccctggtatgtacaacaaacaggagaa 188

---

>ref|NM_105969.1| Arabidopsis thaliana ATP binding / ATPase AT1G73110 mRNA, complete
           cds
          Length = 1437

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 325 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 384
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 899 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 958

                       
Query: 385 aagttctactgg 396
           ||||||||||||
Sbjct: 959 aagttctactgg 970

---

>gb|AY078044.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds
          Length = 1299

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 325 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 384
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 865 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 924

                       
Query: 385 aagttctactgg 396
           ||||||||||||
Sbjct: 925 aagttctactgg 936

---

>gb|AF361834.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds
          Length = 1437

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 325 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 384
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 899 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 958

                       
Query: 385 aagttctactgg 396
           ||||||||||||
Sbjct: 959 aagttctactgg 970

---

>emb|BX815704.1|CNS0AARM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS85ZG11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1496

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 325 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 384
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 873 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 932

                       
Query: 385 aagttctactgg 396
           ||||||||||||
Sbjct: 933 aagttctactgg 944

---

>dbj|AK118942.1| Arabidopsis thaliana At1g73110 mRNA for unknown protein, complete
           cds, clone: RAFL21-28-D21
          Length = 1447

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 325 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 384
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 886 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 945

                       
Query: 385 aagttctactgg 396
           ||||||||||||
Sbjct: 946 aagttctactgg 957

---

>gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N23 genomic sequence, complete
             sequence
          Length = 116944

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                         
Query: 325   gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 384
             ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 97686 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 97627

                         
Query: 385   aagttctactgg 396
             ||||||||||||
Sbjct: 97626 aagttctactgg 97615

---

>emb|BX813694.1|CNS0ADV2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB33ZF10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1426

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                       
Query: 334 aacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctac 393
           ||||||||||| || || || ||||| ||||||||||| ||  | |||||||||||||||
Sbjct: 936 aacgatttctctacactgtatgctccactgatccgtgaaggaagaatggagaagttctac 995

              
Query: 394 tgg 396
           |||
Sbjct: 996 tgg 998

---

>gb|AY273869.1| Pseudomonas aeruginosa PA14 pathogenicity island PAPI-1, complete
             sequence
          Length = 111332

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 514   ttcggtgcttctgcgtgctcgg 535
             ||||||||||||||||||||||
Sbjct: 25490 ttcggtgcttctgcgtgctcgg 25511

---

>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16
          Length = 349142

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 474  caagatcgtcgacaccttccc 494
            |||||||||||||||||||||
Sbjct: 3673 caagatcgtcgacaccttccc 3653

---

>emb|BX818441.1|CNS0ACQX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL79ZC02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 593

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 61/73 (83%), Gaps = 1/73 (1%)
 Strand = Plus / Plus

                                                                       
Query: 325 gtcaccggtaacgatttctcgacgctctacgctc-ctctgatccgtgatggtcgtatgga 383
           ||||| || ||||||||||| || || || |||| | ||||||||||| ||  | |||||
Sbjct: 136 gtcacagggaacgatttctctacactgtatgctctcactgatccgtgaaggaagaatgga 195

                        
Query: 384 gaagttctactgg 396
           |||||||||||||
Sbjct: 196 gaagttctactgg 208

---

>gb|AC002511.1| Homo sapiens chromosome 19 clone PC28130, complete sequence
          Length = 98713

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 421   ggtgtctgcaagggtatcttccag 444
             |||||||||||||||||| |||||
Sbjct: 67265 ggtgtctgcaagggtatcatccag 67288

---

>emb|Z73941.1|LJRAB7B L.japonicus mRNA for small GTP-binding protein, RAB7B
          Length = 1010

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 457 agtgacgagtctgtcgtcaa 476
           ||||||||||||||||||||
Sbjct: 308 agtgacgagtctgtcgtcaa 289

---

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 406     cgtgacgaccgtatcggtgt 425
               ||||||||||||||||||||
Sbjct: 3056327 cgtgacgaccgtatcggtgt 3056308

---

>ref|NM_076469.4| Caenorhabditis elegans Amyloid Precursor-Like family member (apl-1)
            (apl-1) mRNA, complete cds
          Length = 2739

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 242  tgatgaacatcgccgatgcc 261
            ||||||||||||||||||||
Sbjct: 1896 tgatgaacatcgccgatgcc 1877

---

>ref|NM_076470.2| Caenorhabditis elegans Amyloid Precursor-Like family member (apl-1)
            (apl-1) mRNA, complete cds
          Length = 2742

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 242  tgatgaacatcgccgatgcc 261
            ||||||||||||||||||||
Sbjct: 1897 tgatgaacatcgccgatgcc 1878

---

>gb|U56966.2| Caenorhabditis elegans cosmid C42D8, complete sequence
          Length = 42802

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 242   tgatgaacatcgccgatgcc 261
             ||||||||||||||||||||
Sbjct: 34318 tgatgaacatcgccgatgcc 34337

---

>gb|U00240.1|U00240 Caenorhabditis elegans beta-amyloid protein precursor (APL-1) mRNA
            complete cds
          Length = 2742

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 242  tgatgaacatcgccgatgcc 261
            ||||||||||||||||||||
Sbjct: 1882 tgatgaacatcgccgatgcc 1863

---

>emb|AL627188.18| Mouse DNA sequence from clone RP23-113G7 on chromosome 4, complete
             sequence
          Length = 208153

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    tggagagtgggaacgctgga 81
             ||||||||||||||||||||
Sbjct: 90247 tggagagtgggaacgctgga 90228


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,401,557
Number of Sequences: 3902068
Number of extensions: 3401557
Number of successful extensions: 64050
Number of sequences better than 10.0: 111
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63656
Number of HSP's gapped (non-prelim): 285
length of query: 617
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 594
effective length of database: 17,143,297,704
effective search space: 10183118836176
effective search space used: 10183118836176
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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