Clone Name | bags9e24 |
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Clone Library Name | barley_pub |
>EXOC5_ARATH (Q8RVQ5) Exocyst complex component 5 (Exocyst complex component| Sec10) Length = 829 Score = 181 bits (458), Expect = 2e-45 Identities = 100/179 (55%), Positives = 127/179 (70%), Gaps = 3/179 (1%) Frame = +3 Query: 18 LSAVGIWILKV---SLSLYMFHTRXEYTEFEHASLRQLYQSKMAELRAEAKQQSESTGSI 188 L AVG L V + SL+ H + EY E E ASL+QLYQ+KM ELRAE++Q SES+G+I Sbjct: 423 LRAVGCGDLDVEDLTESLFSSH-KDEYPEHERASLKQLYQAKMEELRAESQQVSESSGTI 481 Query: 189 GRAKGASLNTSPQQLISVTVVTEFVRWNEEAISRCTLLFSQPTTVAANVRSIFACLLDQV 368 GR+KGAS+++S QQ ISVT VTEFVRWNEEAI+RCTL SQP T+AANV++IF CLLDQV Sbjct: 482 GRSKGASISSSLQQ-ISVTFVTEFVRWNEEAITRCTLFSSQPATLAANVKAIFTCLLDQV 540 Query: 369 SQYLTVGLDGARESLNEAAAMRDRYVIGTXXXXXXXXXXXXXXXXXXXXXXXXFRSFMM 545 S Y+T GL+ AR+SL+EAAA+R+R+V+GT F+SFM+ Sbjct: 541 SVYITEGLERARDSLSEAAALRERFVLGTSVSRRVAAAAASAAEAAAAAGESSFKSFMV 599 Score = 42.7 bits (99), Expect = 7e-04 Identities = 17/26 (65%), Positives = 23/26 (88%) Frame = +2 Query: 2 AKXLQSIGCGDLDIEGLTESIYVSHK 79 AK L+++GCGDLD+E LTES++ SHK Sbjct: 420 AKDLRAVGCGDLDVEDLTESLFSSHK 445
>PTPA2_KLULA (Q6CKF0) Serine/threonine-protein phosphatase 2A activator 2 (EC| 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase PTPA-2) (PPIase PTPA-2) (Rotamase PTPA-2) (Phosphotyrosyl phosphatase activator 2) Length = 360 Score = 30.8 bits (68), Expect = 2.6 Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Frame = -2 Query: 334 TLAATVVGWENNSVHLDIASSFQR-TNSVTTVTDISCCGEVFKDAPFAR 191 TLA +V G ENN I+ + QR +N ++ VT+I EV KDA +R Sbjct: 30 TLALSVRGRENNDYTQPISDNVQRVSNLLSKVTEIIGKHEVIKDANTSR 78
>NUCB1_HUMAN (Q02818) Nucleobindin-1 precursor (CALNUC)| Length = 461 Score = 29.6 bits (65), Expect = 5.8 Identities = 14/39 (35%), Positives = 25/39 (64%) Frame = +3 Query: 87 YTEFEHASLRQLYQSKMAELRAEAKQQSESTGSIGRAKG 203 YTE E + ++ AEL A+A++ S+ T ++GR++G Sbjct: 342 YTEEELRRFEEELAAREAELNAKAQRLSQETEALGRSQG 380
>ACO32_ARATH (Q9LMI7) Putative acyl-coenzyme A oxidase 3.2, peroxisomal| precursor (EC 1.3.3.6) Length = 675 Score = 29.6 bits (65), Expect = 5.8 Identities = 14/59 (23%), Positives = 25/59 (42%) Frame = -2 Query: 397 PSSPTVKYWLT*SSKHANMDLTLAATVVGWENNSVHLDIASSFQRTNSVTTVTDISCCG 221 P KYW+ ++ HAN + ++ + N +H+ IA + I+ CG Sbjct: 218 PCESAQKYWIGEAANHANHAIVISQLSMNGTNQGIHVFIAQIRDHDGNTCPNVRIADCG 276
>ACOX3_ARATH (Q9LLH9) Acyl-coenzyme A oxidase 3, peroxisomal precursor (EC| 1.3.3.6) (AOX 3) (Medium-chain acyl-CoA oxidase) (AtCX3) Length = 675 Score = 29.3 bits (64), Expect = 7.6 Identities = 15/59 (25%), Positives = 24/59 (40%) Frame = -2 Query: 397 PSSPTVKYWLT*SSKHANMDLTLAATVVGWENNSVHLDIASSFQRTNSVTTVTDISCCG 221 P KYW+ ++ HA + + + N VH IA + S+ I+ CG Sbjct: 218 PCESAQKYWIGGAANHATHTIVFSQLHINGTNQGVHAFIAQIRDQDGSICPNIRIADCG 276
>CARB_LACLC (O32771) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1064 Score = 28.9 bits (63), Expect = 9.9 Identities = 18/42 (42%), Positives = 23/42 (54%) Frame = +3 Query: 204 ASLNTSPQQLISVTVVTEFVRWNEEAISRCTLLFSQPTTVAA 329 A +NT S+T T+ R +EAISR LF+ TVAA Sbjct: 1008 AVVNTMGNTRASLTTATDGFRIRQEAISRGIPLFTSLDTVAA 1049
>CARB_LACLA (Q9CFV2) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1064 Score = 28.9 bits (63), Expect = 9.9 Identities = 18/42 (42%), Positives = 23/42 (54%) Frame = +3 Query: 204 ASLNTSPQQLISVTVVTEFVRWNEEAISRCTLLFSQPTTVAA 329 A +NT S+T T+ R +EAISR LF+ TVAA Sbjct: 1008 AVVNTMGNTRASLTTATDGFRIRQEAISRGIPLFTSLDTVAA 1049
>FER2_PLEBO (P46035) Ferredoxin-2 (Ferredoxin II) (FdII)| Length = 98 Score = 28.9 bits (63), Expect = 9.9 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Frame = -2 Query: 181 PVDSDCCLASALNSAIFD*-YSCLSDACSNSVYSXLV*NIYRLSETFNIQIPTADRLQLL 5 PVD D + A A D +SC S ACS+ V + I + +TF + A LL Sbjct: 19 PVDEDTTVLEAAEEAELDLPFSCHSGACSSCVGKVVEGEINQDDQTFLDEEQVAKGFVLL 78 Query: 4 C 2 C Sbjct: 79 C 79 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,825,580 Number of Sequences: 219361 Number of extensions: 1093188 Number of successful extensions: 2762 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 2719 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2761 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4373119116 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)